Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Forward (+)

3703760 .. 3704977

Gene Structure 1218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g05500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGATGCTCGGAGAACCGCACCGTCCTAATCCAACGGTCCACGTCCCACCGTGGCTTCAGCTGGACGATCCTACGGGCGAGATGTACTCCCCGTACCCGCTCAGCGGGGTCTCCGTTAACTCCGACGGCAATGCAAGCGGCGCTGACTTCAACAGCCCGTACTATCTCGACGAAGCACTAACGACGCTCCAGCGCTTCTTGCCGTCCAACGAGACCGACCTGGACTCCGACTCTGACATTTCTGGCCGCGAATCCGACGCGCCGGTCGACGCCTACTCCTGCGACCACTTCAGGATGTTCGATTTCAAGGTCAGGAGGTGCGCACGTGGAAGGTCACATGACTGGACCGAGTGTCCGTATGCCCACCCGGGTGAGAAGGCCCGGCGGCGCGACCCGAGGAAGTATCACTATTCGGGTACGGCCTGCCCCGATTTCCGAAAAGGTCATTGCAAGAAGGGCGACACGTGTGAGTTCGCGCACGGGGTTTTCGAGTGCTGGCTCCACCCGGCTCGCTACCGCACTCAGCCGTGCAAGGACGGCACCAGCTGCAAGCGGAGGGTTTGTTTCTTTGCTCACACGCCGGAGCAGCTTAGGGTTTTGCCTCAGCAGAGCCCCAGAGGAGGAGCCAACTCGCTCAACTCGGCCGAGTCGTATGACGGGTCGCCGCTGAGGCAGGCGATAGAGGCCGCTGCCGCTTCGTGCGTGAAAACGATGCCATTCATGTCCTCCCCGCCGGAAGACTCGCCGGATGTGTCGCCGCCGATGTCTCCGATGGGCCGGACAATGAGCCGGTCTCTCGGGTCGAGCTCGATAAACGAAATGGTGGCTTCCCTGAGGAACTTGCAGCTCGGAAAGGTCAAGTCTTTGCCCTCTTCTTGGAACGTTCAGCTGGGAGGATCTTCCGGATTCGGGTCTCCAGTATCTTCCGGGTTCGGGTCTCCGTGCTCTTCCGGTTTCGGATCTCCACGCGGGTCCATGCTCCGACCCGGATTCTGCAGCCTGCCTTCAACGCCAACCCGGGTCCCGGTCCGTTCCGGAATCGGGTATTTGGATTTGTGCGAGGAGGAGCCTGCAATGGAGAGGGTGGAGTCTGGAAGGGGGCTGAGAGCCAGGATGTTCGAGAAGCTGAGGGAGGAGAATTCGTTGGGCCGGGTCGACCCGGGTCCGAACTGTACCGGTGCCCCGGATGTTGGGTGGGTTTCTGAGCTGGTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

406

Amino Acids

44.29

Weight (kDa)

6.56

Isoelectric Point (pI)

70.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	96 - 129	2.9e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	140 - 161	6.4e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	263
Acc16I	TGCGCA	1 cut(s)	322
AccB1I	GGYRCC	2 cut(s)	539, 1178
AccBSI	CCGCTC	1 cut(s)	100
AccI	GTMKAC	2 cut(s)	267, 1155
AccII	CGCG	5 cut(s)	249, 260, 390, 476, 969
AccIII	TCCGGA	2 cut(s)	902, 1034
AclI	AACGTT	1 cut(s)	882
AclWI	GGATC	3 cut(s)	62, 904, 967
AcoI	YGGCCR	2 cut(s)	244, 642
AcsI	RAATTY	1 cut(s)	1138
AcuI	CTGAAG	2 cut(s)	41, 274
AcvI	CACGTG	2 cut(s)	326, 465
AcyI	GRCGYC	1 cut(s)	270
AfaI	GTAC	5 cut(s)	86, 95, 161, 418, 1174
AfeI	AGCGCT	1 cut(s)	194
AfiI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
AflIII	ACRYGT	2 cut(s)	462, 464
AgeI	ACCGGT	1 cut(s)	1175
AgsI	TTSAA	3 cut(s)	151, 307, 1008
AhdI	GACNNNNNGTC	1 cut(s)	351
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	2 cut(s)	219, 1109
AleI	CACNNNNGTG	1 cut(s)	369
AluBI	AGCT	8 cut(s)	61, 546, 589, 807, 847, 889, 1126, 1207
AluI	AGCT	8 cut(s)	61, 546, 589, 807, 847, 889, 1126, 1207
Alw21I	GWGCWC	2 cut(s)	809, 947
Alw26I	GTCTC	6 cut(s)	115, 206, 771, 798, 918, 942
AlwI	GGATC	3 cut(s)	62, 904, 967
Ama87I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
Aor13HI	TCCGGA	2 cut(s)	902, 1034
Aor51HI	AGCGCT	1 cut(s)	194
AoxI	GGCC	7 cut(s)	244, 378, 420, 642, 684, 775, 1147
ApeKI	GCWGC	5 cut(s)	546, 586, 689, 844, 996
ApoI	RAATTY	1 cut(s)	1138
AsiGI	ACCGGT	1 cut(s)	1175
AspLEI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
AspS9I	GGNCC	9 cut(s)	37, 345, 379, 775, 972, 1021, 1027, 1147, 1163
AsuHPI	GGTGA	1 cut(s)	383
AvaI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
AvaII	GGWCC	6 cut(s)	37, 345, 972, 1021, 1027, 1163
AxyI	CCTNAGG	1 cut(s)	833
BaeGI	GKGCMC	1 cut(s)	1183
BanI	GGYRCC	2 cut(s)	539, 1178
BanII	GRGCYC	2 cut(s)	614, 809
BbrPI	CACGTG	2 cut(s)	326, 465
BbsI	GAAGAC	1 cut(s)	744
Bbv12I	GWGCWC	2 cut(s)	809, 947
BbvCI	CCTCAGC	3 cut(s)	603, 668, 1127
BbvI	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
BccI	CCATC	1 cut(s)	766
BceAI	ACGGC	5 cut(s)	142, 187, 435, 511, 553
BcgI	CGANNNNNNTGC	2 cut(s)	113, 147
BciT130I	CCWGG	2 cut(s)	221, 1111
BcoDI	GTCTC	6 cut(s)	115, 206, 771, 798, 918, 942
BfmI	CTRYAG	1 cut(s)	994
BfoI	RGCGCY	2 cut(s)	144, 196
BglI	GCCNNNNNGGC	1 cut(s)	670
BlpI	GCTNAGC	1 cut(s)	101
Bme18I	GGWCC	6 cut(s)	37, 345, 972, 1021, 1027, 1163
BmeRI	GACNNNNNGTC	1 cut(s)	351
BmeT110I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	9 cut(s)	37, 345, 379, 775, 972, 1021, 1027, 1147, 1163
BmiI	GGNNCC	9 cut(s)	500, 541, 625, 973, 1022, 1023, 1068, 1164, 1180
BmsI	GCATC	1 cut(s)	702
BoxI	GACNNNNGTC	1 cut(s)	1161
BpiI	GAAGAC	1 cut(s)	744
BplI	GAGNNNNNCTC	4 cut(s)	71, 103, 778, 810
BpmI	CTGGAG	2 cut(s)	173, 900
Bpu10I	CCTNAGC	4 cut(s)	590, 603, 668, 1127
Bpu1102I	GCTNAGC	1 cut(s)	101
BsaAI	YACGTR	2 cut(s)	326, 465
BsaHI	GRCGYC	1 cut(s)	270
BsaI	GGTCTC	5 cut(s)	115, 206, 798, 918, 942
BsaJI	CCNNGG	6 cut(s)	50, 367, 395, 1017, 1159, 1182
BsaWI	WCCGGW	4 cut(s)	902, 950, 1034, 1175
BsaXI	ACNNNNNCTCC	8 cut(s)	209, 239, 260, 290, 547, 577, 1127, 1157
Bsc4I	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
Bse118I	RCCGGY	3 cut(s)	262, 789, 1175
Bse1I	ACTGG	2 cut(s)	347, 917
Bse21I	CCTNAGG	1 cut(s)	833
Bse3DI	GCAATG	3 cut(s)	136, 445, 1080
BseAI	TCCGGA	2 cut(s)	902, 1034
BseBI	CCWGG	2 cut(s)	221, 1111
BseDI	CCNNGG	6 cut(s)	50, 367, 395, 1017, 1159, 1182
BseGI	GGATG	4 cut(s)	300, 754, 1119, 1192
BseLI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
BseMI	GCAATG	3 cut(s)	136, 445, 1080
BseMII	CTCAG	8 cut(s)	115, 536, 617, 659, 824, 1094, 1118, 1194
BseNI	ACTGG	2 cut(s)	347, 917
BseRI	GAGGAG	5 cut(s)	633, 636, 1076, 1079, 1148
BseSI	GKGCMC	1 cut(s)	1183
BseX3I	CGGCCG	1 cut(s)	642
BseXI	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
BseYI	CCCAGC	1 cut(s)	889
Bsh1236I	CGCG	5 cut(s)	249, 260, 390, 476, 969
Bsh1285I	CGRYCG	2 cut(s)	267, 645
BshFI	GGCC	7 cut(s)	246, 380, 422, 644, 686, 777, 1149
BshNI	GGYRCC	2 cut(s)	539, 1178
BshTI	ACCGGT	1 cut(s)	1175
BsiEI	CGRYCG	2 cut(s)	267, 645
BsiHKAI	GWGCWC	2 cut(s)	809, 947
BsiHKCI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
BslFI	GGGAC	2 cut(s)	29, 1007
BslI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
BsmAI	GTCTC	6 cut(s)	115, 206, 771, 798, 918, 942
BsmFI	GGGAC	2 cut(s)	29, 1007
BsnI	GGCC	7 cut(s)	246, 380, 422, 644, 686, 777, 1149
Bso31I	GGTCTC	5 cut(s)	115, 206, 798, 918, 942
BsoBI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
Bsp1286I	GDGCHC	4 cut(s)	614, 809, 947, 1183
Bsp13I	TCCGGA	2 cut(s)	902, 1034
Bsp143I	GATC	3 cut(s)	67, 896, 959
Bsp1720I	GCTNAGC	1 cut(s)	101
BspANI	GGCC	7 cut(s)	246, 380, 422, 644, 686, 777, 1149
BspCNI	CTCAG	8 cut(s)	114, 535, 616, 660, 825, 1095, 1119, 1195
BspEI	TCCGGA	2 cut(s)	902, 1034
BspFNI	CGCG	5 cut(s)	249, 260, 390, 476, 969
BspLI	GGNNCC	9 cut(s)	500, 541, 625, 973, 1022, 1023, 1068, 1164, 1180
BspMAI	CTGCAG	1 cut(s)	998
BspPI	GGATC	3 cut(s)	62, 904, 967
BspQI	GCTCTTC	1 cut(s)	952
BspT107I	GGYRCC	2 cut(s)	539, 1178
BspTNI	GGTCTC	5 cut(s)	115, 206, 798, 918, 942
BsrBI	CCGCTC	1 cut(s)	100
BsrDI	GCAATG	3 cut(s)	136, 445, 1080
BsrFI	RCCGGY	3 cut(s)	262, 789, 1175
BsrI	ACTGG	2 cut(s)	347, 917
BssAI	RCCGGY	3 cut(s)	262, 789, 1175
BssECI	CCNNGG	6 cut(s)	50, 367, 395, 1017, 1159, 1182
BssMI	GATC	3 cut(s)	67, 896, 959
BssNI	GRCGYC	1 cut(s)	270
Bst2UI	CCWGG	2 cut(s)	221, 1111
Bst4CI	ACNGT	4 cut(s)	23, 37, 51, 1172
Bst6I	CTCTTC	2 cut(s)	877, 952
BstACI	GRCGYC	1 cut(s)	270
BstAPI	GCANNNNNTGC	1 cut(s)	546
BstBAI	YACGTR	2 cut(s)	326, 465
BstC8I	GCNNGC	8 cut(s)	136, 424, 497, 511, 551, 675, 1001, 1071
BstDEI	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
BstDSI	CCRYGG	1 cut(s)	50
BstF5I	GGATG	4 cut(s)	300, 754, 1119, 1192
BstFNI	CGCG	5 cut(s)	249, 260, 390, 476, 969
BstH2I	RGCGCY	2 cut(s)	144, 196
BstHHI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
BstKTI	GATC	3 cut(s)	70, 899, 962
BstMAI	GTCTC	6 cut(s)	115, 206, 771, 798, 918, 942
BstMBI	GATC	3 cut(s)	67, 896, 959
BstMCI	CGRYCG	2 cut(s)	267, 645
BstNI	CCWGG	2 cut(s)	221, 1111
BstPAI	GACNNNNGTC	1 cut(s)	1161
BstSFI	CTRYAG	1 cut(s)	994
BstSLI	GKGCMC	1 cut(s)	1183
BstUI	CGCG	5 cut(s)	249, 260, 390, 476, 969
BstV1I	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	896, 959
BstYI	RGATCY	2 cut(s)	896, 959
BstZI	CGGCCG	1 cut(s)	642
Bsu36I	CCTNAGG	1 cut(s)	833
BsuRI	GGCC	7 cut(s)	246, 380, 422, 644, 686, 777, 1149
BtgI	CCRYGG	1 cut(s)	50
BtrI	CACGTC	1 cut(s)	43
BtsCI	GGATG	4 cut(s)	300, 754, 1119, 1192
Cac8I	GCNNGC	8 cut(s)	136, 424, 497, 511, 551, 675, 1001, 1071
CfoI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
Cfr10I	RCCGGY	3 cut(s)	262, 789, 1175
Cfr13I	GGNCC	9 cut(s)	37, 345, 379, 775, 972, 1021, 1027, 1147, 1163
Cfr9I	CCCGGG	3 cut(s)	367, 1017, 1159
CpoI	CGGWCCG	1 cut(s)	1027
CseI	GACGC	3 cut(s)	193, 266, 278
Csp6I	GTAC	5 cut(s)	85, 94, 160, 417, 1173
CspAI	ACCGGT	1 cut(s)	1175
CspI	CGGWCCG	1 cut(s)	1027
CviAII	CATG	3 cut(s)	338, 721, 976
CviQI	GTAC	5 cut(s)	85, 94, 160, 417, 1173
DdeI	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
DpnI	GATC	3 cut(s)	69, 898, 961
DpnII	GATC	3 cut(s)	67, 896, 959
DrdI	GACNNNNNNGTC	1 cut(s)	263
DriI	GACNNNNNGTC	1 cut(s)	351
DseDI	GACNNNNNNGTC	1 cut(s)	263
EaeI	YGGCCR	2 cut(s)	244, 642
EagI	CGGCCG	1 cut(s)	642
Eam1104I	CTCTTC	2 cut(s)	877, 952
Eam1105I	GACNNNNNGTC	1 cut(s)	351
EarI	CTCTTC	2 cut(s)	877, 952
Ecl136II	GAGCTC	1 cut(s)	807
EclXI	CGGCCG	1 cut(s)	642
Eco24I	GRGCYC	2 cut(s)	614, 809
Eco31I	GGTCTC	5 cut(s)	115, 206, 798, 918, 942
Eco47I	GGWCC	6 cut(s)	37, 345, 972, 1021, 1027, 1163
Eco47III	AGCGCT	1 cut(s)	194
Eco52I	CGGCCG	1 cut(s)	642
Eco53kI	GAGCTC	1 cut(s)	807
Eco57I	CTGAAG	2 cut(s)	41, 274
Eco72I	CACGTG	2 cut(s)	326, 465
Eco81I	CCTNAGG	1 cut(s)	833
Eco88I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
EcoICRI	GAGCTC	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	1021
EcoRI	GAATTC	1 cut(s)	1138
EcoRII	CCWGG	2 cut(s)	219, 1109
EcoT38I	GRGCYC	2 cut(s)	614, 809
FaeI	CATG	3 cut(s)	341, 724, 979
FaiI	YATR	5 cut(s)	339, 360, 654, 722, 977
FaqI	GGGAC	2 cut(s)	29, 1007
FatI	CATG	3 cut(s)	337, 720, 975
FauI	CCCGC	4 cut(s)	98, 105, 738, 962
FblI	GTMKAC	2 cut(s)	267, 1155
FokI	GGATG	4 cut(s)	307, 761, 1126, 1199
FriOI	GRGCYC	2 cut(s)	614, 809
FspAI	RTGCGCAY	1 cut(s)	322
FspI	TGCGCA	1 cut(s)	322
GlaI	GCGC	6 cut(s)	142, 194, 261, 322, 389, 477
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	2 cut(s)	173, 900
HaeII	RGCGCY	2 cut(s)	144, 196
HaeIII	GGCC	7 cut(s)	246, 380, 422, 644, 686, 777, 1149
HgaI	GACGC	3 cut(s)	193, 266, 278
HhaI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
Hin1I	GRCGYC	1 cut(s)	270
Hin1II	CATG	3 cut(s)	341, 724, 979
Hin6I	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
HinP1I	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
HincII	GTYRAC	3 cut(s)	118, 268, 1156
HindII	GTYRAC	3 cut(s)	118, 268, 1156
HinfI	GANTC	9 cut(s)	224, 230, 251, 647, 740, 906, 990, 1038, 1088
HpaI	GTTAAC	1 cut(s)	118
HphI	GGTGA	1 cut(s)	383
Hpy166II	GTNNAC	4 cut(s)	40, 118, 268, 1156
Hpy188III	TCNNGA	7 cut(s)	167, 292, 313, 903, 1035, 1092, 1120
Hpy8I	GTNNAC	4 cut(s)	40, 118, 268, 1156
Hpy99I	CGWCG	5 cut(s)	128, 173, 187, 260, 272
HpyAV	CCTTC	5 cut(s)	324, 370, 448, 1014, 1089
HpyCH4III	ACNGT	4 cut(s)	23, 37, 51, 1172
HpyCH4IV	ACGT	4 cut(s)	42, 325, 464, 882
HpyCH4V	TGCA	7 cut(s)	134, 450, 531, 549, 844, 996, 1073
HpyF3I	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
HpySE526I	ACGT	4 cut(s)	42, 325, 464, 882
Hsp92I	GRCGYC	1 cut(s)	270
Hsp92II	CATG	3 cut(s)	341, 724, 979
HspAI	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
KflI	GGGWCCC	1 cut(s)	1021
Kpn2I	TCCGGA	2 cut(s)	902, 1034
KspAI	GTTAAC	1 cut(s)	118
Kzo9I	GATC	3 cut(s)	67, 896, 959
LguI	GCTCTTC	1 cut(s)	952
LmnI	GCTCC	6 cut(s)	192, 504, 583, 623, 984, 1066
Lsp1109I	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
LweI	GCATC	1 cut(s)	702
MaeII	ACGT	4 cut(s)	42, 325, 464, 882
MaeIII	GTNAC	1 cut(s)	333
MalI	GATC	3 cut(s)	69, 898, 961
MbiI	CCGCTC	1 cut(s)	100
MboI	GATC	3 cut(s)	67, 896, 959
MboII	GAAGA	5 cut(s)	749, 864, 891, 915, 939
MflI	RGATCY	2 cut(s)	896, 959
MhlI	GDGCHC	4 cut(s)	614, 809, 947, 1183
MluCI	AATT	1 cut(s)	1138
MlyI	GAGTC	5 cut(s)	218, 224, 656, 734, 1097
MmeI	TCCRAC	6 cut(s)	56, 147, 231, 252, 279, 1006
MroI	TCCGGA	2 cut(s)	902, 1034
MseI	TTAA	1 cut(s)	117
MslI	CAYNNNNRTG	1 cut(s)	369
MspA1I	CMGCKG	6 cut(s)	61, 105, 546, 667, 689, 889
MvaI	CCWGG	2 cut(s)	221, 1111
MvnI	CGCG	5 cut(s)	249, 260, 390, 476, 969
NdeII	GATC	3 cut(s)	67, 896, 959
NlaIII	CATG	3 cut(s)	341, 724, 979
NlaIV	GGNNCC	9 cut(s)	500, 541, 625, 973, 1022, 1023, 1068, 1164, 1180
NmeAIII	GCCGAG	2 cut(s)	620, 670
NmuCI	GTSAC	1 cut(s)	333
NsbI	TGCGCA	1 cut(s)	322
OliI	CACNNNNGTG	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	952
PcsI	WCGNNNNNNNCGW	3 cut(s)	264, 486, 647
PfeI	GAWTC	4 cut(s)	251, 906, 990, 1038
PinAI	ACCGGT	1 cut(s)	1175
PleI	GAGTC	5 cut(s)	218, 224, 655, 734, 1096
PmaCI	CACGTG	2 cut(s)	326, 465
PmlI	CACGTG	2 cut(s)	326, 465
PpsI	GAGTC	5 cut(s)	218, 224, 655, 734, 1096
Ppu21I	YACGTR	2 cut(s)	326, 465
PpuMI	RGGWCCY	1 cut(s)	1021
PshAI	GACNNNNGTC	1 cut(s)	1161
Psp124BI	GAGCTC	1 cut(s)	809
Psp1406I	AACGTT	1 cut(s)	882
Psp5II	RGGWCCY	1 cut(s)	1021
Psp6I	CCWGG	2 cut(s)	219, 1109
PspCI	CACGTG	2 cut(s)	326, 465
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	2 cut(s)	219, 1109
PspN4I	GGNNCC	9 cut(s)	500, 541, 625, 973, 1022, 1023, 1068, 1164, 1180
PspPI	GGNCC	9 cut(s)	37, 345, 379, 775, 972, 1021, 1027, 1147, 1163
PspPPI	RGGWCCY	1 cut(s)	1021
PstI	CTGCAG	1 cut(s)	998
PsuI	RGATCY	2 cut(s)	896, 959
PvuII	CAGCTG	3 cut(s)	61, 546, 889
RsaI	GTAC	5 cut(s)	86, 95, 161, 418, 1174
RsaNI	GTAC	5 cut(s)	85, 94, 160, 417, 1173
RseI	CAYNNNNRTG	1 cut(s)	369
Rsr2I	CGGWCCG	1 cut(s)	1027
RsrII	CGGWCCG	1 cut(s)	1027
SacI	GAGCTC	1 cut(s)	809
SalI	GTCGAC	2 cut(s)	266, 1154
SapI	GCTCTTC	1 cut(s)	952
SaqAI	TTAA	1 cut(s)	117
Sau3AI	GATC	3 cut(s)	67, 896, 959
Sau96I	GGNCC	9 cut(s)	37, 345, 379, 775, 972, 1021, 1027, 1147, 1163
SchI	GAGTC	5 cut(s)	218, 224, 656, 734, 1097
SduI	GDGCHC	4 cut(s)	614, 809, 947, 1183
SfaNI	GCATC	1 cut(s)	702
SfcI	CTRYAG	1 cut(s)	994
SinI	GGWCC	6 cut(s)	37, 345, 972, 1021, 1027, 1163
SmaI	CCCGGG	3 cut(s)	369, 1019, 1161
SmiMI	CAYNNNNRTG	1 cut(s)	369
Sse9I	AATT	1 cut(s)	1138
SstI	GAGCTC	1 cut(s)	809
TaaI	ACNGT	4 cut(s)	23, 37, 51, 1172
TaiI	ACGT	4 cut(s)	45, 328, 467, 885
TaqI	TCGA	8 cut(s)	168, 267, 300, 489, 803, 809, 1119, 1155
TaqII	GACCGA	2 cut(s)	230, 362
TasI	AATT	1 cut(s)	1138
TatI	WGTACW	1 cut(s)	84
TauI	GCSGC	7 cut(s)	141, 249, 388, 667, 689, 695, 760
TfiI	GAWTC	4 cut(s)	251, 906, 990, 1038
Tru1I	TTAA	1 cut(s)	117
Tru9I	TTAA	1 cut(s)	117
TseFI	GTSAC	1 cut(s)	333
TseI	GCWGC	5 cut(s)	546, 586, 689, 844, 996
Tsp45I	GTSAC	1 cut(s)	333
TspDTI	ATGAA	1 cut(s)	709
TspGWI	ACGGA	4 cut(s)	103, 345, 930, 1019
TspMI	CCCGGG	3 cut(s)	367, 1017, 1159
VpaK11BI	GGWCC	6 cut(s)	37, 345, 972, 1021, 1027, 1163
XapI	RAATTY	1 cut(s)	1138
XmaI	CCCGGG	3 cut(s)	367, 1017, 1159
XmiI	GTMKAC	2 cut(s)	267, 1155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.