Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Forward (+)

5532989 .. 5534149

Gene Structure 1161 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016304

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGATGATCGGCGAACCTCACCGTTCGAATCCGACCATCCACGTCCCCCCGTGGCTCACCCTTGACGATCCAACGGCCGAGATGTACTCCCCCTACCCCCTGAGCGGCGTCTCCGTCAACTCTGACGTCACCAATGCCAACAGCCCCTACCACCTCAACGAGGCTCTCGCCACTCTCCAGCGCTACTTGCCTTCCAACGAGGCTTCCGACCCGGACCCGGACTCCGACTCCGAGATTTCGGGTATGGACTCGGACTCTCCGGTAGACGCCTACTCCTGCGACCATTTTCGGATGTTTGAGTTCAAGGTTCGTCGCTGCGCACGTGGCAGGTCCCATGACTGGACCGACTGCCCCTTCGCCCACCCGGGCGAGAAGGCCCGCCGCCGCGACCCGAGGAAGTACCACTATTCGGGTTCCGCCTGCCCCGATTTCCGAAAGGGCCACTGCAAGAAGGGAGACTCCTGCGAGTTCGCTCACGGCGTTTTCGAGTGCTGGCTCCACCCTGCGCGTTATCGGACTCAGCCCTGTAAAGATGGTACTAGCTGCAAGAGGAGAGTGTGCTTCTTCGCTCACACGCCGGAGCAGCTCAGGGTTTTGCCCCAGCAGAGTCCCCGAGGGTCAACCTCGGCCGAGTCGTACGACGGGTCGCCGCTGAGGCAGGCCATGGAGGCGGCGTCGTTGGGGAAAGGTATGCCGTTTATGTCGTCGCCGCCGTCGATTTCGCCGGAAGATTCGCCGCCGGTGTCTCCGATGACCAGGTCGGTGAGCCGGTCTCTGGGTTCGAGCTCGATTAATGAAATGGTGGCGTCGCTGAGGAACTTGCAGCTGGGGAAGGTCAAGTCTCTGCCCACTTCATGGAATGTTCAGGTCGGGTCGCCCGGGTTCGTTTCTCCACGCGGGTCGATGCTCCGTCCCGGGTTCTGTAGCCTGCCGTCGACTCCGACCCGGATTCCGACCCGCTCTGCAGTTGGGTTTCTGGATTTCTGTGATGAGGGTTGCGAGGAGGAGCCGCCGATGGAGAGGGTGGAGTCTGGGAGGGACTTGAGGGTCAAGATGTTCGAGAGGTTGAGGGAGGAGAATTCTCTGGAGCGGGTTGACCCGATCCAGGCACAGGCTTCCGGTGCTCCGGATGTTGGATGGGTTTCTGAGCTGGTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

387

Amino Acids

42.78

Weight (kDa)

6.15

Isoelectric Point (pI)

69.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	95 - 128	2.3e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	139 - 160	6.2e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1046
AatII	GACGTC	1 cut(s)	129
Acc16I	TGCGCA	1 cut(s)	319
Acc36I	ACCTGC	1 cut(s)	318
AccB7I	CCANNNNNTGG	1 cut(s)	855
AccBSI	CCGCTC	3 cut(s)	105, 960, 1090
AccI	GTMKAC	2 cut(s)	264, 935
AccII	CGCG	3 cut(s)	387, 508, 897
AccIII	TCCGGA	1 cut(s)	1126
AclWI	GGATC	2 cut(s)	62, 1096
AcoI	YGGCCR	2 cut(s)	75, 627
AcsI	RAATTY	1 cut(s)	1078
AcvI	CACGTG	1 cut(s)	323
AcyI	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
AfaI	GTAC	4 cut(s)	86, 401, 538, 638
AfeI	AGCGCT	1 cut(s)	182
AgsI	TTSAA	1 cut(s)	304
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	2 cut(s)	755, 1104
AluBI	AGCT	5 cut(s)	543, 586, 786, 826, 1150
AluI	AGCT	5 cut(s)	543, 586, 786, 826, 1150
Alw21I	GWGCWC	2 cut(s)	788, 1126
Alw26I	GTCTC	5 cut(s)	115, 450, 750, 777, 846
AlwI	GGATC	2 cut(s)	62, 1096
Ama87I	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
Aor13HI	TCCGGA	1 cut(s)	1126
Aor51HI	AGCGCT	1 cut(s)	182
AoxI	GGCC	5 cut(s)	75, 375, 439, 627, 660
ApeKI	GCWGC	4 cut(s)	315, 543, 583, 823
ApoI	RAATTY	1 cut(s)	1078
ArsI	GACNNNNNNTTYG	2 cut(s)	338, 370
AseI	ATTAAT	1 cut(s)	792
AspLEI	GCGC	3 cut(s)	183, 320, 508
AspS9I	GGNCC	5 cut(s)	214, 330, 342, 376, 439
AsuC2I	CCSGG	9 cut(s)	212, 218, 365, 366, 879, 880, 915, 916, 946
AsuHPI	GGTGA	4 cut(s)	11, 49, 121, 775
AsuII	TTCGAA	1 cut(s)	26
AvaI	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
AvaII	GGWCC	3 cut(s)	214, 330, 342
BanII	GRGCYC	1 cut(s)	788
BbrPI	CACGTG	1 cut(s)	323
Bbv12I	GWGCWC	2 cut(s)	788, 1126
BbvCI	CCTCAGC	2 cut(s)	653, 812
BbvI	GCAGC	4 cut(s)	302, 530, 595, 835
BccI	CCATC	4 cut(s)	44, 527, 1009, 1131
BceAI	ACGGC	5 cut(s)	90, 493, 679, 697, 916
BciT130I	CCWGG	2 cut(s)	757, 1106
BcnI	CCSGG	9 cut(s)	212, 218, 365, 366, 879, 880, 915, 916, 946
BcoDI	GTCTC	5 cut(s)	115, 450, 750, 777, 846
BfaI	CTAG	1 cut(s)	540
BfmI	CTRYAG	2 cut(s)	922, 963
BfoI	RGCGCY	1 cut(s)	184
BfuAI	ACCTGC	1 cut(s)	318
BglI	GCCNNNNNGGC	2 cut(s)	655, 668
Bme18I	GGWCC	3 cut(s)	214, 330, 342
BmeT110I	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	5 cut(s)	214, 330, 342, 376, 439
BmiI	GGNNCC	5 cut(s)	216, 332, 415, 497, 1008
BmsI	GCATC	1 cut(s)	894
BplI	GAGNNNNNCTC	4 cut(s)	71, 103, 757, 789
BpmI	CTGGAG	2 cut(s)	161, 1106
Bpu10I	CCTNAGC	4 cut(s)	101, 587, 653, 812
Bpu14I	TTCGAA	1 cut(s)	26
BpuEI	CTTGAG	1 cut(s)	1063
BpuMI	CCSGG	9 cut(s)	212, 218, 365, 366, 879, 880, 915, 916, 946
BsaAI	YACGTR	1 cut(s)	323
BsaHI	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
BsaI	GGTCTC	1 cut(s)	777
BsaJI	CCNNGG	8 cut(s)	50, 364, 392, 613, 624, 663, 878, 914
BsaWI	WCCGGW	3 cut(s)	259, 1118, 1126
BsaXI	ACNNNNNCTCC	8 cut(s)	206, 212, 236, 242, 257, 287, 659, 689
Bse118I	RCCGGY	2 cut(s)	739, 768
Bse1I	ACTGG	1 cut(s)	344
BseAI	TCCGGA	1 cut(s)	1126
BseBI	CCWGG	2 cut(s)	757, 1106
BseDI	CCNNGG	8 cut(s)	50, 364, 392, 613, 624, 663, 878, 914
BseGI	GGATG	4 cut(s)	36, 297, 1135, 1142
BseMII	CTCAG	6 cut(s)	92, 533, 601, 644, 803, 1137
BseNI	ACTGG	1 cut(s)	344
BseRI	GAGGAG	4 cut(s)	565, 1016, 1019, 1088
BseX3I	CGGCCG	2 cut(s)	75, 627
BseXI	GCAGC	4 cut(s)	302, 530, 595, 835
BseYI	CCCAGC	2 cut(s)	600, 826
Bsh1236I	CGCG	3 cut(s)	387, 508, 897
Bsh1285I	CGRYCG	2 cut(s)	78, 630
BshFI	GGCC	5 cut(s)	77, 377, 441, 629, 662
BsiEI	CGRYCG	2 cut(s)	78, 630
BsiHKAI	GWGCWC	2 cut(s)	788, 1126
BsiHKCI	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
BsiWI	CGTACG	1 cut(s)	636
BslFI	GGGAC	5 cut(s)	29, 316, 594, 897, 1052
BsmAI	GTCTC	5 cut(s)	115, 450, 750, 777, 846
BsmBI	CGTCTC	1 cut(s)	115
BsmFI	GGGAC	5 cut(s)	29, 316, 594, 897, 1052
BsnI	GGCC	5 cut(s)	77, 377, 441, 629, 662
Bso31I	GGTCTC	1 cut(s)	777
BsoBI	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
Bsp119I	TTCGAA	1 cut(s)	26
Bsp1286I	GDGCHC	2 cut(s)	788, 1126
Bsp13I	TCCGGA	1 cut(s)	1126
Bsp143I	GATC	3 cut(s)	6, 67, 1101
Bsp19I	CCATGG	1 cut(s)	663
BspANI	GGCC	5 cut(s)	77, 377, 441, 629, 662
BspCNI	CTCAG	6 cut(s)	93, 532, 600, 645, 804, 1138
BspEI	TCCGGA	1 cut(s)	1126
BspFNI	CGCG	3 cut(s)	387, 508, 897
BspLI	GGNNCC	5 cut(s)	216, 332, 415, 497, 1008
BspMAI	CTGCAG	1 cut(s)	967
BspMI	ACCTGC	1 cut(s)	318
BspPI	GGATC	2 cut(s)	62, 1096
BspT104I	TTCGAA	1 cut(s)	26
BspTNI	GGTCTC	1 cut(s)	777
BsrBI	CCGCTC	3 cut(s)	105, 960, 1090
BsrFI	RCCGGY	2 cut(s)	739, 768
BsrI	ACTGG	1 cut(s)	344
BssAI	RCCGGY	2 cut(s)	739, 768
BssECI	CCNNGG	8 cut(s)	50, 364, 392, 613, 624, 663, 878, 914
BssMI	GATC	3 cut(s)	6, 67, 1101
BssNI	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
BssT1I	CCWWGG	1 cut(s)	663
Bst2UI	CCWGG	2 cut(s)	757, 1106
Bst4CI	ACNGT	1 cut(s)	23
BstACI	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
BstBAI	YACGTR	1 cut(s)	323
BstBI	TTCGAA	1 cut(s)	26
BstC8I	GCNNGC	5 cut(s)	379, 421, 494, 660, 929
BstDEI	CTNAG	6 cut(s)	101, 519, 587, 653, 812, 1146
BstDSI	CCRYGG	2 cut(s)	50, 663
BstENI	CCTNNNNNAGG	1 cut(s)	158
BstF5I	GGATG	4 cut(s)	36, 297, 1135, 1142
BstFNI	CGCG	3 cut(s)	387, 508, 897
BstH2I	RGCGCY	1 cut(s)	184
BstHHI	GCGC	3 cut(s)	183, 320, 508
BstKTI	GATC	3 cut(s)	9, 70, 1104
BstMAI	GTCTC	5 cut(s)	115, 450, 750, 777, 846
BstMBI	GATC	3 cut(s)	6, 67, 1101
BstMCI	CGRYCG	2 cut(s)	78, 630
BstMWI	GCNNNNNNNGC	6 cut(s)	187, 324, 583, 655, 668, 1121
BstNI	CCWGG	2 cut(s)	757, 1106
BstSFI	CTRYAG	2 cut(s)	922, 963
BstUI	CGCG	3 cut(s)	387, 508, 897
BstV1I	GCAGC	4 cut(s)	302, 530, 595, 835
BstZI	CGGCCG	2 cut(s)	75, 627
BsuRI	GGCC	5 cut(s)	77, 377, 441, 629, 662
BtgI	CCRYGG	2 cut(s)	50, 663
BtrI	CACGTC	1 cut(s)	43
BtsCI	GGATG	4 cut(s)	36, 297, 1135, 1142
BtsI	GCAGTG	1 cut(s)	442
BtsIMutI	CAGTG	1 cut(s)	442
BveI	ACCTGC	1 cut(s)	318
Cac8I	GCNNGC	5 cut(s)	379, 421, 494, 660, 929
CfoI	GCGC	3 cut(s)	183, 320, 508
Cfr10I	RCCGGY	2 cut(s)	739, 768
Cfr13I	GGNCC	5 cut(s)	214, 330, 342, 376, 439
Cfr9I	CCCGGG	3 cut(s)	364, 878, 914
CseI	GACGC	4 cut(s)	97, 275, 663, 795
CsiI	ACCWGGT	1 cut(s)	755
Csp6I	GTAC	4 cut(s)	85, 400, 537, 637
CviAII	CATG	3 cut(s)	335, 664, 855
CviQI	GTAC	4 cut(s)	85, 400, 537, 637
DdeI	CTNAG	6 cut(s)	101, 519, 587, 653, 812, 1146
DpnI	GATC	3 cut(s)	8, 69, 1103
DpnII	GATC	3 cut(s)	6, 67, 1101
DrdI	GACNNNNNNGTC	1 cut(s)	1046
DseDI	GACNNNNNNGTC	1 cut(s)	1046
EaeI	YGGCCR	2 cut(s)	75, 627
EagI	CGGCCG	2 cut(s)	75, 627
EciI	GGCGGA	1 cut(s)	406
Ecl136II	GAGCTC	1 cut(s)	786
EclXI	CGGCCG	2 cut(s)	75, 627
Eco130I	CCWWGG	1 cut(s)	663
Eco24I	GRGCYC	1 cut(s)	788
Eco31I	GGTCTC	1 cut(s)	777
Eco47I	GGWCC	3 cut(s)	214, 330, 342
Eco47III	AGCGCT	1 cut(s)	182
Eco52I	CGGCCG	2 cut(s)	75, 627
Eco53kI	GAGCTC	1 cut(s)	786
Eco72I	CACGTG	1 cut(s)	323
Eco88I	CYCGRG	5 cut(s)	364, 391, 612, 878, 914
EcoICRI	GAGCTC	1 cut(s)	786
EcoNI	CCTNNNNNAGG	1 cut(s)	158
EcoO109I	RGGNCCY	1 cut(s)	330
EcoRI	GAATTC	1 cut(s)	1078
EcoRII	CCWGG	2 cut(s)	755, 1104
EcoT14I	CCWWGG	1 cut(s)	663
EcoT38I	GRGCYC	1 cut(s)	788
ErhI	CCWWGG	1 cut(s)	663
Esp3I	CGTCTC	1 cut(s)	115
FaeI	CATG	3 cut(s)	338, 667, 858
FaiI	YATR	6 cut(s)	245, 336, 665, 692, 701, 856
FaqI	GGGAC	5 cut(s)	29, 316, 594, 897, 1052
FatI	CATG	3 cut(s)	334, 663, 854
FauI	CCCGC	4 cut(s)	386, 890, 965, 1083
FblI	GTMKAC	2 cut(s)	264, 935
FokI	GGATG	4 cut(s)	23, 304, 1142, 1149
FriOI	GRGCYC	1 cut(s)	788
FspBI	CTAG	1 cut(s)	540
FspI	TGCGCA	1 cut(s)	319
GlaI	GCGC	3 cut(s)	182, 319, 507
GsaI	CCCAGC	2 cut(s)	604, 830
GsuI	CTGGAG	2 cut(s)	161, 1106
HaeII	RGCGCY	1 cut(s)	184
HaeIII	GGCC	5 cut(s)	77, 377, 441, 629, 662
HgaI	GACGC	4 cut(s)	97, 275, 663, 795
HhaI	GCGC	3 cut(s)	183, 320, 508
Hin1I	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
Hin1II	CATG	3 cut(s)	338, 667, 858
Hin6I	GCGC	3 cut(s)	181, 318, 506
HinP1I	GCGC	3 cut(s)	181, 318, 506
HincII	GTYRAC	4 cut(s)	118, 621, 936, 1096
HindII	GTYRAC	4 cut(s)	118, 621, 936, 1096
HphI	GGTGA	4 cut(s)	11, 49, 121, 775
Hpy166II	GTNNAC	5 cut(s)	118, 265, 621, 936, 1096
Hpy188III	TCNNGA	5 cut(s)	977, 1051, 1060, 1085, 1127
Hpy8I	GTNNAC	5 cut(s)	118, 265, 621, 936, 1096
Hpy99I	CGWCG	7 cut(s)	315, 644, 679, 709, 718, 811, 937
HpyAV	CCTTC	5 cut(s)	201, 364, 367, 445, 826
HpyCH4III	ACNGT	1 cut(s)	23
HpyCH4IV	ACGT	3 cut(s)	42, 126, 322
HpyCH4V	TGCA	4 cut(s)	447, 546, 823, 965
HpyF10VI	GCNNNNNNNGC	6 cut(s)	187, 324, 583, 655, 668, 1121
HpyF3I	CTNAG	6 cut(s)	101, 519, 587, 653, 812, 1146
HpySE526I	ACGT	3 cut(s)	42, 126, 322
Hsp92I	GRCGYC	5 cut(s)	108, 126, 267, 674, 806
Hsp92II	CATG	3 cut(s)	338, 667, 858
HspAI	GCGC	3 cut(s)	181, 318, 506
Kpn2I	TCCGGA	1 cut(s)	1126
Kzo9I	GATC	3 cut(s)	6, 67, 1101
LmnI	GCTCC	6 cut(s)	501, 580, 912, 1006, 1087, 1129
Lsp1109I	GCAGC	4 cut(s)	302, 530, 595, 835
LweI	GCATC	1 cut(s)	894
MabI	ACCWGGT	1 cut(s)	755
MaeI	CTAG	1 cut(s)	540
MaeII	ACGT	3 cut(s)	42, 126, 322
MaeIII	GTNAC	1 cut(s)	127
MalI	GATC	3 cut(s)	8, 69, 1103
MbiI	CCGCTC	3 cut(s)	105, 960, 1090
MboI	GATC	3 cut(s)	6, 67, 1101
MboII	GAAGA	2 cut(s)	556, 740
MhlI	GDGCHC	2 cut(s)	788, 1126
MluCI	AATT	2 cut(s)	1078, 1156
MmeI	TCCRAC	8 cut(s)	56, 95, 219, 231, 249, 965, 977, 1114
MroI	TCCGGA	1 cut(s)	1126
MseI	TTAA	1 cut(s)	792
MspA1I	CMGCKG	2 cut(s)	652, 826
MvaI	CCWGG	2 cut(s)	757, 1106
MvnI	CGCG	3 cut(s)	387, 508, 897
MwoI	GCNNNNNNNGC	6 cut(s)	187, 324, 583, 655, 668, 1121
NciI	CCSGG	9 cut(s)	212, 218, 365, 366, 879, 880, 915, 916, 946
NcoI	CCATGG	1 cut(s)	663
NdeII	GATC	3 cut(s)	6, 67, 1101
NlaIII	CATG	3 cut(s)	338, 667, 858
NlaIV	GGNNCC	5 cut(s)	216, 332, 415, 497, 1008
NmeAIII	GCCGAG	3 cut(s)	103, 605, 655
NmuCI	GTSAC	1 cut(s)	127
NsbI	TGCGCA	1 cut(s)	319
NspV	TTCGAA	1 cut(s)	26
PcsI	WCGNNNNNNNCGW	7 cut(s)	204, 319, 477, 483, 632, 710, 713
PfeI	GAWTC	3 cut(s)	28, 731, 949
Pfl23II	CGTACG	1 cut(s)	636
PflFI	GACNNNGTC	1 cut(s)	757
PflMI	CCANNNNNTGG	1 cut(s)	855
PmaCI	CACGTG	1 cut(s)	323
PmlI	CACGTG	1 cut(s)	323
Ppu21I	YACGTR	1 cut(s)	323
PpuMI	RGGWCCY	1 cut(s)	330
PshBI	ATTAAT	1 cut(s)	792
Psp124BI	GAGCTC	1 cut(s)	788
Psp5II	RGGWCCY	1 cut(s)	330
Psp6I	CCWGG	2 cut(s)	755, 1104
PspCI	CACGTG	1 cut(s)	323
PspFI	CCCAGC	2 cut(s)	600, 826
PspGI	CCWGG	2 cut(s)	755, 1104
PspLI	CGTACG	1 cut(s)	636
PspN4I	GGNNCC	5 cut(s)	216, 332, 415, 497, 1008
PspPI	GGNCC	5 cut(s)	214, 330, 342, 376, 439
PspPPI	RGGWCCY	1 cut(s)	330
PstI	CTGCAG	1 cut(s)	967
PsyI	GACNNNGTC	1 cut(s)	757
PvuII	CAGCTG	1 cut(s)	826
RsaI	GTAC	4 cut(s)	86, 401, 538, 638
RsaNI	GTAC	4 cut(s)	85, 400, 537, 637
SacI	GAGCTC	1 cut(s)	788
SalI	GTCGAC	1 cut(s)	934
SaqAI	TTAA	1 cut(s)	792
Sau3AI	GATC	3 cut(s)	6, 67, 1101
Sau96I	GGNCC	5 cut(s)	214, 330, 342, 376, 439
SduI	GDGCHC	2 cut(s)	788, 1126
SexAI	ACCWGGT	1 cut(s)	755
SfaNI	GCATC	1 cut(s)	894
SfcI	CTRYAG	2 cut(s)	922, 963
SfuI	TTCGAA	1 cut(s)	26
SgrAI	CRCCGGYG	1 cut(s)	739
SinI	GGWCC	3 cut(s)	214, 330, 342
SmaI	CCCGGG	3 cut(s)	366, 880, 916
SmlI	CTYRAG	1 cut(s)	1042
SmoI	CTYRAG	1 cut(s)	1042
Sse9I	AATT	2 cut(s)	1078, 1156
SspMI	CTAG	1 cut(s)	540
SstI	GAGCTC	1 cut(s)	788
StyI	CCWWGG	1 cut(s)	663
TaaI	ACNGT	1 cut(s)	23
TaiI	ACGT	3 cut(s)	45, 129, 325
TaqI	TCGA	8 cut(s)	26, 486, 716, 782, 788, 902, 935, 1059
TaqII	GACCGA	1 cut(s)	359
TasI	AATT	2 cut(s)	1078, 1156
TatI	WGTACW	1 cut(s)	84
TauI	GCSGC	8 cut(s)	108, 384, 387, 652, 674, 712, 739, 1012
TfiI	GAWTC	3 cut(s)	28, 731, 949
Tru1I	TTAA	1 cut(s)	792
Tru9I	TTAA	1 cut(s)	792
TscAI	CASTG	1 cut(s)	449
TseFI	GTSAC	1 cut(s)	127
TseI	GCWGC	4 cut(s)	315, 543, 583, 823
Tsp45I	GTSAC	1 cut(s)	127
TspDTI	ATGAA	2 cut(s)	810, 843
TspGWI	ACGGA	2 cut(s)	103, 899
TspMI	CCCGGG	3 cut(s)	364, 878, 914
TspRI	CASTG	1 cut(s)	449
Tth111I	GACNNNGTC	1 cut(s)	757
Van91I	CCANNNNNTGG	1 cut(s)	855
VpaK11BI	GGWCC	3 cut(s)	214, 330, 342
VspI	ATTAAT	1 cut(s)	792
XagI	CCTNNNNNAGG	1 cut(s)	158
XapI	RAATTY	1 cut(s)	1078
XmaI	CCCGGG	3 cut(s)	364, 878, 914
XmiI	GTMKAC	2 cut(s)	264, 935
XspI	CTAG	1 cut(s)	540
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.