Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Forward (+)

5935187 .. 5936344

Gene Structure 1158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG072500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGATCGGCGAACCTCACCGTTCGAATCCGACCATCCACGTCCCCCCGTGGCTCACCCTCGACGATCCAACGGCCGAGATGTACTCCCCCTACCCCCTGAGCGGCGTCTCCGTCAACTCTGACGTCACCAATGCCAACAGCCCCTACCACCTCAACGAGGCTCTCGCCACTCTCCAGCGCTACTTGCCTTCCAACGAGGCTTCCGACCCGGACCCGGACTCCGACTGCGAGATTTCGGGTATGGACTCGGACTCTCCGGTGGACGCCTACTCCTGCGACCATTTTCGGATGTTTGAGTTCAAGGTTCGTCGCTGCGCACGTGGCAGGTCCCATGACTGGACCGACTGCCCCTTCGCCCACCCGGGCGAGAAGGCCCGCCGCCGCGACCCGAGGAAGTACCACTATTCGGGTTCCGCCTGCCCCGATTTTCGAAAGGGCCACTGCAAGAAGGGAGACTCGTGCGAGTTCGCTCACGGCGTTTTCGAGTGCTGGCTCCACCCTGCGCGTTATCGGACTCAGCCCTGTAAAGATGGTACTAGCTGCAAGAGGAGAGTGTGCTTCTTCGCTCACACGCCGGAGCAGCTTAGGGTTTTGCCCCAGCAGAGTCCCCGAGGGTCAACCTCGGCCGAGTCGTACGACGGGTCGCCGCTGAGGCAGGCCATGGAGGCGGCGTCGTTGGGGAAAGGCATGCCGTTTATGTCGTCGCCGCCGTCGATTTCGCCGGAAGATTCGCCGCCGGTGTCTCCGATGACCCGGTCGGTGAGCCGGTCTCTGGGTTCGAGCTCGATTAATGAAATGGTGGCGTCGCTGAGGAACTTGCAGCTGGGGAAGGTCAAGTCTCTGCCCACTTCATGGAATGTTCAAGTCGGGTCGCCCGGGTTCGTTTCTCCACGCGGGTCGATGCTCCGTCCCGGGTTCTGTAGCCTACCTTCGACTCCGACCCGGATTCCGACCCGCTCTGCAATTGGGTTTCTGGATTTCTGTGACGAGGGTTGCGAGGAGGAGCCGCCGATGGAGAGGGTGGAGTCTGGGAGGGACTTGAGGGCCAAGATGTTCGAGAGGTTGAGGGAGGAGAATTCTCTGGAGCGGGTCGACCCGACCGAGCCACAGGCTTCCGGTGCTCCGGATGTTGGATGGGTTTCTGAGCTGGTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

385

Amino Acids

42.66

Weight (kDa)

6.03

Isoelectric Point (pI)

70.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	94 - 127	2.3e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	138 - 159	6.2e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	126
Acc16I	TGCGCA	1 cut(s)	316
Acc36I	ACCTGC	1 cut(s)	315
AccB7I	CCANNNNNTGG	1 cut(s)	852
AccBSI	CCGCTC	3 cut(s)	102, 957, 1087
AccI	GTMKAC	1 cut(s)	1092
AccII	CGCG	3 cut(s)	384, 505, 894
AccIII	TCCGGA	1 cut(s)	1123
AclWI	GGATC	1 cut(s)	59
AcoI	YGGCCR	2 cut(s)	72, 624
AcsI	RAATTY	1 cut(s)	1075
AcvI	CACGTG	1 cut(s)	320
AcyI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
AfaI	GTAC	4 cut(s)	83, 398, 535, 635
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
AgsI	TTSAA	2 cut(s)	301, 863
AjiI	CACGTC	1 cut(s)	40
AluBI	AGCT	5 cut(s)	540, 583, 783, 823, 1147
AluI	AGCT	5 cut(s)	540, 583, 783, 823, 1147
Alw21I	GWGCWC	2 cut(s)	785, 1123
Alw26I	GTCTC	5 cut(s)	112, 447, 747, 774, 843
AlwI	GGATC	1 cut(s)	59
Ama87I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
Aor13HI	TCCGGA	1 cut(s)	1123
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	6 cut(s)	72, 372, 436, 624, 657, 1044
ApeKI	GCWGC	4 cut(s)	312, 540, 580, 820
ApoI	RAATTY	1 cut(s)	1075
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
AseI	ATTAAT	1 cut(s)	789
AspLEI	GCGC	3 cut(s)	180, 317, 505
AspS9I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
AsuHPI	GGTGA	4 cut(s)	8, 46, 118, 772
AsuII	TTCGAA	2 cut(s)	23, 430
AvaI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
AvaII	GGWCC	3 cut(s)	211, 327, 339
BanII	GRGCYC	1 cut(s)	785
BarI	GAAGNNNNNNTAC	2 cut(s)	913, 945
BauI	CACGAG	1 cut(s)	457
BbrPI	CACGTG	1 cut(s)	320
Bbv12I	GWGCWC	2 cut(s)	785, 1123
BbvCI	CCTCAGC	2 cut(s)	650, 809
BbvI	GCAGC	4 cut(s)	299, 527, 592, 832
BccI	CCATC	4 cut(s)	41, 524, 1006, 1128
BceAI	ACGGC	4 cut(s)	87, 490, 676, 694
BcoDI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BfaI	CTAG	1 cut(s)	537
BfmI	CTRYAG	1 cut(s)	919
BfoI	RGCGCY	1 cut(s)	181
BfuAI	ACCTGC	1 cut(s)	315
BglI	GCCNNNNNGGC	2 cut(s)	652, 665
Bme18I	GGWCC	3 cut(s)	211, 327, 339
BmeT110I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
BmgBI	CACGTC	1 cut(s)	40
BmgT120I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
BmiI	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
BmsI	GCATC	1 cut(s)	891
BplI	GAGNNNNNCTC	4 cut(s)	68, 100, 754, 786
BpmI	CTGGAG	2 cut(s)	158, 1103
Bpu10I	CCTNAGC	4 cut(s)	98, 584, 650, 809
Bpu14I	TTCGAA	2 cut(s)	23, 430
BpuEI	CTTGAG	1 cut(s)	1060
BsaAI	YACGTR	1 cut(s)	320
BsaHI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BsaI	GGTCTC	1 cut(s)	774
BsaJI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BsaWI	WCCGGW	3 cut(s)	256, 1115, 1123
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 254, 284, 656, 686
Bsc4I	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
Bse118I	RCCGGY	2 cut(s)	736, 765
Bse1I	ACTGG	1 cut(s)	341
BseAI	TCCGGA	1 cut(s)	1123
BseDI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BseGI	GGATG	4 cut(s)	33, 294, 1132, 1139
BseLI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
BseMII	CTCAG	5 cut(s)	89, 530, 641, 800, 1134
BseNI	ACTGG	1 cut(s)	341
BseRI	GAGGAG	4 cut(s)	562, 1013, 1016, 1085
BseX3I	CGGCCG	2 cut(s)	72, 624
BseXI	GCAGC	4 cut(s)	299, 527, 592, 832
BseYI	CCCAGC	2 cut(s)	597, 823
Bsh1236I	CGCG	3 cut(s)	384, 505, 894
Bsh1285I	CGRYCG	4 cut(s)	75, 627, 758, 1101
BshFI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BsiEI	CGRYCG	4 cut(s)	75, 627, 758, 1101
BsiHKAI	GWGCWC	2 cut(s)	785, 1123
BsiHKCI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
BsiWI	CGTACG	1 cut(s)	633
BslFI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
BslI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
BsmAI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
BsnI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
Bso31I	GGTCTC	1 cut(s)	774
BsoBI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
Bsp119I	TTCGAA	2 cut(s)	23, 430
Bsp1286I	GDGCHC	2 cut(s)	785, 1123
Bsp13I	TCCGGA	1 cut(s)	1123
Bsp143I	GATC	2 cut(s)	3, 64
Bsp19I	CCATGG	1 cut(s)	660
BspANI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BspCNI	CTCAG	5 cut(s)	90, 529, 642, 801, 1135
BspEI	TCCGGA	1 cut(s)	1123
BspFNI	CGCG	3 cut(s)	384, 505, 894
BspLI	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	1 cut(s)	59
BspT104I	TTCGAA	2 cut(s)	23, 430
BspTNI	GGTCTC	1 cut(s)	774
BsrBI	CCGCTC	3 cut(s)	102, 957, 1087
BsrFI	RCCGGY	2 cut(s)	736, 765
BsrI	ACTGG	1 cut(s)	341
BssAI	RCCGGY	2 cut(s)	736, 765
BssECI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BssMI	GATC	2 cut(s)	3, 64
BssNI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BssSI	CACGAG	1 cut(s)	457
BssT1I	CCWWGG	1 cut(s)	660
Bst2BI	CACGAG	1 cut(s)	457
Bst4CI	ACNGT	1 cut(s)	20
BstACI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BstBAI	YACGTR	1 cut(s)	320
BstBI	TTCGAA	2 cut(s)	23, 430
BstC8I	GCNNGC	5 cut(s)	376, 418, 491, 657, 689
BstDEI	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
BstDSI	CCRYGG	2 cut(s)	47, 660
BstENI	CCTNNNNNAGG	1 cut(s)	155
BstF5I	GGATG	4 cut(s)	33, 294, 1132, 1139
BstFNI	CGCG	3 cut(s)	384, 505, 894
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	3 cut(s)	180, 317, 505
BstKTI	GATC	2 cut(s)	6, 67
BstMAI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BstMBI	GATC	2 cut(s)	3, 64
BstMCI	CGRYCG	4 cut(s)	75, 627, 758, 1101
BstMWI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
BstNSI	RCATGY	1 cut(s)	691
BstSFI	CTRYAG	1 cut(s)	919
BstUI	CGCG	3 cut(s)	384, 505, 894
BstV1I	GCAGC	4 cut(s)	299, 527, 592, 832
BstZI	CGGCCG	2 cut(s)	72, 624
BsuRI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BtgI	CCRYGG	2 cut(s)	47, 660
BtrI	CACGTC	1 cut(s)	40
BtsCI	GGATG	4 cut(s)	33, 294, 1132, 1139
BtsI	GCAGTG	1 cut(s)	439
BtsIMutI	CAGTG	1 cut(s)	439
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	5 cut(s)	376, 418, 491, 657, 689
CfoI	GCGC	3 cut(s)	180, 317, 505
Cfr10I	RCCGGY	2 cut(s)	736, 765
Cfr13I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
Cfr9I	CCCGGG	3 cut(s)	361, 875, 911
CseI	GACGC	4 cut(s)	94, 272, 660, 792
Csp6I	GTAC	4 cut(s)	82, 397, 534, 634
CviAII	CATG	4 cut(s)	332, 661, 688, 852
CviQI	GTAC	4 cut(s)	82, 397, 534, 634
DdeI	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
DpnI	GATC	2 cut(s)	5, 66
DpnII	GATC	2 cut(s)	3, 64
EaeI	YGGCCR	2 cut(s)	72, 624
EagI	CGGCCG	2 cut(s)	72, 624
EciI	GGCGGA	1 cut(s)	403
Ecl136II	GAGCTC	1 cut(s)	783
EclXI	CGGCCG	2 cut(s)	72, 624
Eco130I	CCWWGG	1 cut(s)	660
Eco24I	GRGCYC	1 cut(s)	785
Eco31I	GGTCTC	1 cut(s)	774
Eco47I	GGWCC	3 cut(s)	211, 327, 339
Eco47III	AGCGCT	1 cut(s)	179
Eco52I	CGGCCG	2 cut(s)	72, 624
Eco53kI	GAGCTC	1 cut(s)	783
Eco72I	CACGTG	1 cut(s)	320
Eco88I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
EcoICRI	GAGCTC	1 cut(s)	783
EcoNI	CCTNNNNNAGG	1 cut(s)	155
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	1075
EcoT14I	CCWWGG	1 cut(s)	660
EcoT38I	GRGCYC	1 cut(s)	785
ErhI	CCWWGG	1 cut(s)	660
Esp3I	CGTCTC	1 cut(s)	112
FaeI	CATG	4 cut(s)	335, 664, 691, 855
FaiI	YATR	6 cut(s)	242, 333, 662, 689, 698, 853
FaqI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
FatI	CATG	4 cut(s)	331, 660, 687, 851
FauI	CCCGC	4 cut(s)	383, 887, 962, 1080
FblI	GTMKAC	1 cut(s)	1092
FokI	GGATG	4 cut(s)	20, 301, 1139, 1146
FriOI	GRGCYC	1 cut(s)	785
FspBI	CTAG	1 cut(s)	537
FspI	TGCGCA	1 cut(s)	316
GlaI	GCGC	3 cut(s)	179, 316, 504
GsaI	CCCAGC	2 cut(s)	601, 827
GsuI	CTGGAG	2 cut(s)	158, 1103
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
HgaI	GACGC	4 cut(s)	94, 272, 660, 792
HhaI	GCGC	3 cut(s)	180, 317, 505
Hin1I	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
Hin1II	CATG	4 cut(s)	335, 664, 691, 855
Hin6I	GCGC	3 cut(s)	178, 315, 503
HinP1I	GCGC	3 cut(s)	178, 315, 503
HincII	GTYRAC	3 cut(s)	115, 618, 1093
HindII	GTYRAC	3 cut(s)	115, 618, 1093
HphI	GGTGA	4 cut(s)	8, 46, 118, 772
Hpy166II	GTNNAC	4 cut(s)	115, 262, 618, 1093
Hpy188III	TCNNGA	4 cut(s)	974, 1057, 1082, 1124
Hpy8I	GTNNAC	4 cut(s)	115, 262, 618, 1093
Hpy99I	CGWCG	7 cut(s)	65, 312, 641, 676, 706, 715, 808
HpyAV	CCTTC	6 cut(s)	198, 361, 364, 442, 823, 939
HpyCH4III	ACNGT	1 cut(s)	20
HpyCH4IV	ACGT	3 cut(s)	39, 123, 319
HpyCH4V	TGCA	4 cut(s)	444, 543, 820, 962
HpyF10VI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
HpyF3I	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
HpySE526I	ACGT	3 cut(s)	39, 123, 319
Hsp92I	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
Hsp92II	CATG	4 cut(s)	335, 664, 691, 855
HspAI	GCGC	3 cut(s)	178, 315, 503
Kpn2I	TCCGGA	1 cut(s)	1123
Kzo9I	GATC	2 cut(s)	3, 64
LmnI	GCTCC	6 cut(s)	498, 577, 909, 1003, 1084, 1126
Lsp1109I	GCAGC	4 cut(s)	299, 527, 592, 832
LweI	GCATC	1 cut(s)	891
MaeI	CTAG	1 cut(s)	537
MaeII	ACGT	3 cut(s)	39, 123, 319
MaeIII	GTNAC	2 cut(s)	124, 983
MalI	GATC	2 cut(s)	5, 66
MbiI	CCGCTC	3 cut(s)	102, 957, 1087
MboI	GATC	2 cut(s)	3, 64
MboII	GAAGA	2 cut(s)	553, 737
MfeI	CAATTG	1 cut(s)	963
MhlI	GDGCHC	2 cut(s)	785, 1123
MluCI	AATT	3 cut(s)	963, 1075, 1153
MlyI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 613, 638, 928, 1034
MmeI	TCCRAC	8 cut(s)	53, 92, 216, 228, 246, 962, 974, 1111
MroI	TCCGGA	1 cut(s)	1123
MseI	TTAA	1 cut(s)	789
MspA1I	CMGCKG	2 cut(s)	649, 823
MunI	CAATTG	1 cut(s)	963
MvnI	CGCG	3 cut(s)	384, 505, 894
MwoI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
NcoI	CCATGG	1 cut(s)	660
NdeII	GATC	2 cut(s)	3, 64
NlaIII	CATG	4 cut(s)	335, 664, 691, 855
NlaIV	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
NmeAIII	GCCGAG	3 cut(s)	100, 602, 652
NmuCI	GTSAC	2 cut(s)	124, 983
NsbI	TGCGCA	1 cut(s)	316
NspI	RCATGY	1 cut(s)	691
NspV	TTCGAA	2 cut(s)	23, 430
PaeI	GCATGC	1 cut(s)	691
PcsI	WCGNNNNNNNCGW	9 cut(s)	201, 316, 474, 480, 629, 707, 710, 993, 1098
PfeI	GAWTC	3 cut(s)	25, 728, 946
Pfl23II	CGTACG	1 cut(s)	633
PflFI	GACNNNGTC	1 cut(s)	754
PflMI	CCANNNNNTGG	1 cut(s)	852
PleI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 612, 637, 928, 1033
PmaCI	CACGTG	1 cut(s)	320
PmlI	CACGTG	1 cut(s)	320
PpsI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 612, 637, 928, 1033
Ppu21I	YACGTR	1 cut(s)	320
PpuMI	RGGWCCY	1 cut(s)	327
PshBI	ATTAAT	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	785
Psp5II	RGGWCCY	1 cut(s)	327
PspCI	CACGTG	1 cut(s)	320
PspFI	CCCAGC	2 cut(s)	597, 823
PspLI	CGTACG	1 cut(s)	633
PspN4I	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
PspPI	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
PspPPI	RGGWCCY	1 cut(s)	327
PsyI	GACNNNGTC	1 cut(s)	754
PvuII	CAGCTG	1 cut(s)	823
RsaI	GTAC	4 cut(s)	83, 398, 535, 635
RsaNI	GTAC	4 cut(s)	82, 397, 534, 634
SacI	GAGCTC	1 cut(s)	785
SalI	GTCGAC	1 cut(s)	1091
SaqAI	TTAA	1 cut(s)	789
Sau3AI	GATC	2 cut(s)	3, 64
Sau96I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
SchI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 613, 638, 928, 1034
SduI	GDGCHC	2 cut(s)	785, 1123
SfaNI	GCATC	1 cut(s)	891
SfcI	CTRYAG	1 cut(s)	919
SfuI	TTCGAA	2 cut(s)	23, 430
SgrAI	CRCCGGYG	1 cut(s)	736
SinI	GGWCC	3 cut(s)	211, 327, 339
SmaI	CCCGGG	3 cut(s)	363, 877, 913
SmlI	CTYRAG	1 cut(s)	1039
SmoI	CTYRAG	1 cut(s)	1039
SphI	GCATGC	1 cut(s)	691
Sse9I	AATT	3 cut(s)	963, 1075, 1153
SspMI	CTAG	1 cut(s)	537
SstI	GAGCTC	1 cut(s)	785
StyI	CCWWGG	1 cut(s)	660
TaaI	ACNGT	1 cut(s)	20
TaiI	ACGT	3 cut(s)	42, 126, 322
TaqII	GACCGA	2 cut(s)	356, 1115
TasI	AATT	3 cut(s)	963, 1075, 1153
TatI	WGTACW	1 cut(s)	81
TauI	GCSGC	8 cut(s)	105, 381, 384, 649, 671, 709, 736, 1009
TfiI	GAWTC	3 cut(s)	25, 728, 946
Tru1I	TTAA	1 cut(s)	789
Tru9I	TTAA	1 cut(s)	789
TscAI	CASTG	1 cut(s)	446
TseFI	GTSAC	2 cut(s)	124, 983
TseI	GCWGC	4 cut(s)	312, 540, 580, 820
Tsp45I	GTSAC	2 cut(s)	124, 983
TspDTI	ATGAA	2 cut(s)	807, 840
TspGWI	ACGGA	2 cut(s)	100, 896
TspMI	CCCGGG	3 cut(s)	361, 875, 911
TspRI	CASTG	1 cut(s)	446
Tth111I	GACNNNGTC	1 cut(s)	754
Van91I	CCANNNNNTGG	1 cut(s)	852
VpaK11BI	GGWCC	3 cut(s)	211, 327, 339
VspI	ATTAAT	1 cut(s)	789
XagI	CCTNNNNNAGG	1 cut(s)	155
XapI	RAATTY	1 cut(s)	1075
XceI	RCATGY	1 cut(s)	691
XmaI	CCCGGG	3 cut(s)	361, 875, 911
XmiI	GTMKAC	1 cut(s)	1092
XspI	CTAG	1 cut(s)	537
ZraI	GACGTC	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.