Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Reverse (-)

6073821 .. 6074939

Gene Structure 1119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1075000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGATGCTCGGAGAACCGACCCGACTTCACCCCACTCTCCATGTTCCTCCCTGGGACTCACTTGACGATCATTTTATTCATACCCCCACCTCACCCTTCTCCATCCCCATTCACTCCGGTAACTCTAACGGCAATGCCTCCAACGGAGGAGACTACTCCCCGCTCTCCCCAATGTTCCTCGACTCGCTCGCCGCTCTCCATCGTTACCTCCCGTCTAATGAGTCTGACTCGCTGGCTGAGGACCCGGACATGCCAATGAACCCGATCTCCTGCGATCAGTTCCGGATGTTCGAGTTCAAGGTCCGGAGGTGCGCGCACGGCAGGTCGCACGATTGGACCGACTGTCCATACGCCCACCCGGGCGAGAAGGCCCGGCGTCGCGACCCGAGAAAGTACCACTACTCCGGCGCTGCATGCCCTGACTTCCGCAAGGGCCACTGCCCGAAGGGTGACTCGTGCGAGTTCGCTCACGGTGTTTTCGAGTGCTGGCTCCACCCGGCCCGGTACCGGACCCAGCCATGCAAGGACGGGTTGCGCTGCAACCGCCGGGTCTGCTTCTTTGCCCACACACCCGAACAGCTCCGGGTCCTGCCCGGTCAGAGCCCGAGAACCCAAGGGTCGGGAGCTTTGGACTCGTATCCATTTGGTTCGTCCCCCACCTCGATCCTGATGTCACCTCCATTGTCTCCGCCGTCTGAGTCGCCGCCAATGTCGCCGAACAGCCCTCATCTCGGCCGTAACTCGGTGAGCAAACTTGTTGCTTCGATGCGAAACTTCAAGCTTGCTAAGATGAAAATGAACTCTCCGCCTGCATGGGGAACCCAAATGGGATCCGGGTTCGGCTCCTCACCACGTGGGTCAGCGTTCCGACCCGGTTTTTGCAGCCTTCCTTCGACCCCGACTCGCACAACTGGTCGGGTCGGACCAAACCCGGTTGATCTCTGGGACCAGCCGTGCGAAGAGGAGCCGGCAATGGAGAGGGTGGAGTCCGGGAGGGACCTCCGGGCGAGAATGTACGCGAGGCTGAGTAAGGAGAACTCTCTTGGTCGAGTGGGACGAGTTGACTCGGGCACGGCAGCTCCCGACGTGGGCTGGATTTCGGATCTAGTCAGCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006355 GO:0006417 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0017148 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032870 GO:0034248 GO:0034249 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044464 GO:0045935 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903311 GO:1903313 GO:1903506 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

373

Amino Acids

41.06

Weight (kDa)

8.44

Isoelectric Point (pI)

61.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	94 - 126	5.6e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	137 - 158	3.3e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	312
Acc65I	GGTACC	1 cut(s)	504
AccB1I	GGYRCC	1 cut(s)	504
AccBSI	CCGCTC	2 cut(s)	163, 194
AccII	CGCG	3 cut(s)	314, 381, 1019
AccIII	TCCGGA	2 cut(s)	282, 303
AciI	CCGC	7 cut(s)	161, 192, 427, 544, 689, 704, 806
AclWI	GGATC	4 cut(s)	658, 825, 838, 1110
AcoI	YGGCCR	1 cut(s)	733
AcvI	CACGTG	1 cut(s)	854
AcyI	GRCGYC	1 cut(s)	376
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	3 cut(s)	395, 506, 1016
AfiI	CCNNNNNNNGG	6 cut(s)	507, 619, 731, 742, 815, 1088
AgsI	TTSAA	2 cut(s)	298, 778
AhdI	GACNNNNNGTC	1 cut(s)	342
AjiI	CACGTC	1 cut(s)	1087
AjnI	CCWGG	1 cut(s)	50
AloI	GAACNNNNNNTCC	2 cut(s)	251, 283
AluBI	AGCT	4 cut(s)	580, 626, 781, 1079
AluI	AGCT	4 cut(s)	580, 626, 781, 1079
Alw26I	GTCTC	2 cut(s)	144, 690
AlwI	GGATC	4 cut(s)	658, 825, 838, 1110
Ama87I	CYCGRG	4 cut(s)	358, 385, 604, 1066
Aor13HI	TCCGGA	2 cut(s)	282, 303
AoxI	GGCC	4 cut(s)	369, 433, 498, 733
ApeKI	GCWGC	4 cut(s)	410, 537, 882, 1076
ArsI	GACNNNNNNTTYG	2 cut(s)	861, 893
Asp718I	GGTACC	1 cut(s)	504
AspLEI	GCGC	4 cut(s)	314, 316, 410, 537
AsuHPI	GGTGA	6 cut(s)	20, 84, 461, 666, 757, 840
AvaI	CYCGRG	4 cut(s)	358, 385, 604, 1066
AvaII	GGWCC	8 cut(s)	241, 301, 336, 510, 586, 923, 946, 997
BaeGI	GKGCMC	1 cut(s)	1073
BamHI	GGATCC	1 cut(s)	830
BanI	GGYRCC	1 cut(s)	504
BanII	GRGCYC	1 cut(s)	605
BauI	CACGAG	1 cut(s)	454
BbrPI	CACGTG	1 cut(s)	854
BbvCI	CCTCAGC	1 cut(s)	237
BbvI	GCAGC	4 cut(s)	397, 524, 894, 1088
BccI	CCATC	2 cut(s)	110, 207
BceAI	ACGGC	6 cut(s)	145, 334, 676, 720, 937, 1089
BciT130I	CCWGG	1 cut(s)	52
BciVI	GTATCC	1 cut(s)	648
BcoDI	GTCTC	2 cut(s)	144, 690
BfaI	CTAG	1 cut(s)	1106
BfoI	RGCGCY	1 cut(s)	411
BfuAI	ACCTGC	1 cut(s)	312
BfuI	GTATCC	1 cut(s)	648
BisI	GCNGC	6 cut(s)	192, 411, 538, 704, 883, 1077
BlsI	GCNGC	6 cut(s)	193, 412, 539, 705, 884, 1078
Bme18I	GGWCC	8 cut(s)	241, 301, 336, 510, 586, 923, 946, 997
BmeRI	GACNNNNNGTC	1 cut(s)	342
BmeT110I	CYCGRG	4 cut(s)	358, 385, 604, 1066
BmgBI	CACGTC	1 cut(s)	1087
BmsI	GCATC	1 cut(s)	756
BplI	GAGNNNNNCTC	2 cut(s)	212, 244
Bpu10I	CCTNAGC	1 cut(s)	237
BsaAI	YACGTR	1 cut(s)	854
BsaHI	GRCGYC	1 cut(s)	376
BsaJI	CCNNGG	4 cut(s)	50, 51, 358, 613
BsaWI	WCCGGW	4 cut(s)	116, 282, 303, 507
BsaXI	ACNNNNNCTCC	6 cut(s)	251, 281, 386, 416, 1063, 1093
Bsc4I	CCNNNNNNNGG	6 cut(s)	507, 619, 731, 742, 815, 1088
Bse118I	RCCGGY	1 cut(s)	967
Bse1I	ACTGG	1 cut(s)	916
Bse3DI	GCAATG	2 cut(s)	139, 978
BseAI	TCCGGA	2 cut(s)	282, 303
BseBI	CCWGG	1 cut(s)	52
BseDI	CCNNGG	4 cut(s)	50, 51, 358, 613
BseGI	GGATG	2 cut(s)	102, 291
BseLI	CCNNNNNNNGG	6 cut(s)	507, 619, 731, 742, 815, 1088
BseMI	GCAATG	2 cut(s)	139, 978
BseMII	CTCAG	3 cut(s)	228, 687, 1016
BseNI	ACTGG	1 cut(s)	916
BsePI	GCGCGC	1 cut(s)	312
BseRI	GAGGAG	3 cut(s)	162, 835, 977
BseSI	GKGCMC	1 cut(s)	1073
BseX3I	CGGCCG	1 cut(s)	733
BseXI	GCAGC	4 cut(s)	397, 524, 894, 1088
BseYI	CCCAGC	1 cut(s)	513
Bsh1236I	CGCG	3 cut(s)	314, 381, 1019
Bsh1285I	CGRYCG	1 cut(s)	736
BshFI	GGCC	4 cut(s)	371, 435, 500, 735
BshNI	GGYRCC	1 cut(s)	504
BsiEI	CGRYCG	1 cut(s)	736
BsiHKCI	CYCGRG	4 cut(s)	358, 385, 604, 1066
BslFI	GGGAC	5 cut(s)	68, 637, 959, 1010, 1068
BslI	CCNNNNNNNGG	6 cut(s)	507, 619, 731, 742, 815, 1088
BsmAI	GTCTC	2 cut(s)	144, 690
BsmFI	GGGAC	5 cut(s)	68, 637, 959, 1010, 1068
BsnI	GGCC	4 cut(s)	371, 435, 500, 735
BsoBI	CYCGRG	4 cut(s)	358, 385, 604, 1066
Bsp1286I	GDGCHC	2 cut(s)	605, 1073
Bsp13I	TCCGGA	2 cut(s)	282, 303
Bsp143I	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
Bsp68I	TCGCGA	1 cut(s)	381
BspACI	CCGC	7 cut(s)	161, 192, 427, 544, 689, 704, 806
BspANI	GGCC	4 cut(s)	371, 435, 500, 735
BspCNI	CTCAG	3 cut(s)	229, 688, 1017
BspEI	TCCGGA	2 cut(s)	282, 303
BspFNI	CGCG	3 cut(s)	314, 381, 1019
BspMI	ACCTGC	1 cut(s)	312
BspPI	GGATC	4 cut(s)	658, 825, 838, 1110
BspT107I	GGYRCC	1 cut(s)	504
BsrBI	CCGCTC	2 cut(s)	163, 194
BsrDI	GCAATG	2 cut(s)	139, 978
BsrFI	RCCGGY	1 cut(s)	967
BsrI	ACTGG	1 cut(s)	916
BssAI	RCCGGY	1 cut(s)	967
BssECI	CCNNGG	4 cut(s)	50, 51, 358, 613
BssHII	GCGCGC	1 cut(s)	312
BssMI	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
BssNI	GRCGYC	1 cut(s)	376
BssSI	CACGAG	1 cut(s)	454
BssT1I	CCWWGG	1 cut(s)	613
Bst2BI	CACGAG	1 cut(s)	454
Bst2UI	CCWGG	1 cut(s)	52
Bst4CI	ACNGT	2 cut(s)	344, 473
Bst6I	CTCTTC	1 cut(s)	954
BstACI	GRCGYC	1 cut(s)	376
BstBAI	YACGTR	1 cut(s)	854
BstC8I	GCNNGC	8 cut(s)	189, 234, 314, 415, 488, 783, 810, 969
BstDEI	CTNAG	4 cut(s)	237, 696, 786, 1025
BstF5I	GGATG	2 cut(s)	102, 291
BstFNI	CGCG	3 cut(s)	314, 381, 1019
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	4 cut(s)	314, 316, 410, 537
BstKTI	GATC	7 cut(s)	70, 267, 277, 666, 833, 940, 1105
BstMAI	GTCTC	2 cut(s)	144, 690
BstMBI	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
BstMCI	CGRYCG	1 cut(s)	736
BstMWI	GCNNNNNNNGC	5 cut(s)	318, 414, 543, 552, 712
BstNI	CCWGG	1 cut(s)	52
BstNSI	RCATGY	2 cut(s)	253, 417
BstSLI	GKGCMC	1 cut(s)	1073
BstUI	CGCG	3 cut(s)	314, 381, 1019
BstV1I	GCAGC	4 cut(s)	397, 524, 894, 1088
BstX2I	RGATCY	2 cut(s)	830, 1102
BstYI	RGATCY	2 cut(s)	830, 1102
BstZI	CGGCCG	1 cut(s)	733
BsuI	GTATCC	1 cut(s)	648
BsuRI	GGCC	4 cut(s)	371, 435, 500, 735
BtrI	CACGTC	1 cut(s)	1087
BtsCI	GGATG	2 cut(s)	102, 291
BtsI	GCAGTG	1 cut(s)	436
BtsIMutI	CAGTG	1 cut(s)	436
BtuMI	TCGCGA	1 cut(s)	381
BveI	ACCTGC	1 cut(s)	312
Cac8I	GCNNGC	8 cut(s)	189, 234, 314, 415, 488, 783, 810, 969
CfoI	GCGC	4 cut(s)	314, 316, 410, 537
Cfr10I	RCCGGY	1 cut(s)	967
Cfr9I	CCCGGG	1 cut(s)	358
CseI	GACGC	1 cut(s)	365
Csp6I	GTAC	3 cut(s)	394, 505, 1015
CviAII	CATG	5 cut(s)	41, 250, 414, 519, 813
CviQI	GTAC	3 cut(s)	394, 505, 1015
DdeI	CTNAG	4 cut(s)	237, 696, 786, 1025
DpnI	GATC	7 cut(s)	69, 266, 276, 665, 832, 939, 1104
DpnII	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
DraIII	CACNNNGTG	1 cut(s)	854
DriI	GACNNNNNGTC	1 cut(s)	342
EaeI	YGGCCR	1 cut(s)	733
EagI	CGGCCG	1 cut(s)	733
Eam1104I	CTCTTC	1 cut(s)	954
Eam1105I	GACNNNNNGTC	1 cut(s)	342
EarI	CTCTTC	1 cut(s)	954
EciI	GGCGGA	2 cut(s)	678, 795
EclXI	CGGCCG	1 cut(s)	733
Eco130I	CCWWGG	1 cut(s)	613
Eco24I	GRGCYC	1 cut(s)	605
Eco47I	GGWCC	8 cut(s)	241, 301, 336, 510, 586, 923, 946, 997
Eco52I	CGGCCG	1 cut(s)	733
Eco72I	CACGTG	1 cut(s)	854
Eco88I	CYCGRG	4 cut(s)	358, 385, 604, 1066
EcoO109I	RGGNCCY	3 cut(s)	241, 586, 997
EcoRII	CCWGG	1 cut(s)	50
EcoT14I	CCWWGG	1 cut(s)	613
EcoT38I	GRGCYC	1 cut(s)	605
ErhI	CCWWGG	1 cut(s)	613
FaeI	CATG	5 cut(s)	44, 253, 417, 522, 816
FaiI	YATR	7 cut(s)	42, 81, 251, 349, 415, 520, 814
FaqI	GGGAC	5 cut(s)	68, 637, 959, 1010, 1068
FatI	CATG	5 cut(s)	40, 249, 413, 518, 812
FauI	CCCGC	1 cut(s)	168
Fnu4HI	GCNGC	6 cut(s)	192, 411, 538, 704, 883, 1077
FokI	GGATG	2 cut(s)	89, 298
FriOI	GRGCYC	1 cut(s)	605
Fsp4HI	GCNGC	6 cut(s)	192, 411, 538, 704, 883, 1077
FspBI	CTAG	1 cut(s)	1106
GlaI	GCGC	4 cut(s)	313, 315, 409, 536
GluI	GCNGC	6 cut(s)	192, 411, 538, 704, 883, 1077
GsaI	CCCAGC	1 cut(s)	517
HaeII	RGCGCY	1 cut(s)	411
HaeIII	GGCC	4 cut(s)	371, 435, 500, 735
HgaI	GACGC	1 cut(s)	365
HhaI	GCGC	4 cut(s)	314, 316, 410, 537
Hin1I	GRCGYC	1 cut(s)	376
Hin1II	CATG	5 cut(s)	44, 253, 417, 522, 816
Hin6I	GCGC	4 cut(s)	312, 314, 408, 535
HinP1I	GCGC	4 cut(s)	312, 314, 408, 535
HincII	GTYRAC	1 cut(s)	1063
HindII	GTYRAC	1 cut(s)	1063
HindIII	AAGCTT	1 cut(s)	779
HphI	GGTGA	6 cut(s)	20, 84, 461, 666, 757, 840
Hpy166II	GTNNAC	1 cut(s)	1063
Hpy188I	TCNGA	7 cut(s)	11, 226, 600, 697, 869, 923, 1102
Hpy188III	TCNNGA	6 cut(s)	283, 304, 380, 621, 667, 1082
Hpy8I	GTNNAC	1 cut(s)	1063
Hpy99I	CGWCG	2 cut(s)	381, 1088
HpyAV	CCTTC	5 cut(s)	106, 361, 439, 896, 900
HpyCH4III	ACNGT	2 cut(s)	344, 473
HpyCH4IV	ACGT	2 cut(s)	853, 1086
HpyCH4V	TGCA	5 cut(s)	413, 522, 540, 812, 882
HpyF10VI	GCNNNNNNNGC	5 cut(s)	318, 414, 543, 552, 712
HpyF3I	CTNAG	4 cut(s)	237, 696, 786, 1025
HpySE526I	ACGT	2 cut(s)	853, 1086
Hsp92I	GRCGYC	1 cut(s)	376
Hsp92II	CATG	5 cut(s)	44, 253, 417, 522, 816
HspAI	GCGC	4 cut(s)	312, 314, 408, 535
Kpn2I	TCCGGA	2 cut(s)	282, 303
KpnI	GGTACC	1 cut(s)	508
KroI	GCCGGC	1 cut(s)	967
KroNI	GCCGGC	1 cut(s)	969
Kzo9I	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
LmnI	GCTCC	6 cut(s)	495, 585, 623, 848, 964, 1084
Lsp1109I	GCAGC	4 cut(s)	397, 524, 894, 1088
LweI	GCATC	1 cut(s)	756
MaeI	CTAG	1 cut(s)	1106
MaeII	ACGT	2 cut(s)	853, 1086
MaeIII	GTNAC	5 cut(s)	119, 203, 449, 672, 737
MalI	GATC	7 cut(s)	69, 266, 276, 665, 832, 939, 1104
MbiI	CCGCTC	2 cut(s)	163, 194
MboI	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
MboII	GAAGA	1 cut(s)	971
MflI	RGATCY	2 cut(s)	830, 1102
MhlI	GDGCHC	2 cut(s)	605, 1073
MmeI	TCCRAC	3 cut(s)	165, 892, 901
MroI	TCCGGA	2 cut(s)	282, 303
MroNI	GCCGGC	1 cut(s)	967
MslI	CAYNNNNRTG	1 cut(s)	254
MvaI	CCWGG	1 cut(s)	52
MvnI	CGCG	3 cut(s)	314, 381, 1019
MwoI	GCNNNNNNNGC	5 cut(s)	318, 414, 543, 552, 712
NaeI	GCCGGC	1 cut(s)	969
NdeII	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
NgoMIV	GCCGGC	1 cut(s)	967
NlaIII	CATG	5 cut(s)	44, 253, 417, 522, 816
NmeAIII	GCCGAG	1 cut(s)	711
NmuCI	GTSAC	2 cut(s)	449, 672
NruI	TCGCGA	1 cut(s)	381
NspI	RCATGY	2 cut(s)	253, 417
PaeI	GCATGC	1 cut(s)	417
PasI	CCCWGGG	1 cut(s)	51
PauI	GCGCGC	1 cut(s)	312
PcsI	WCGNNNNNNNCGW	3 cut(s)	336, 477, 1054
PdiI	GCCGGC	1 cut(s)	969
PfoI	TCCNGGA	1 cut(s)	989
PkrI	GCNGC	6 cut(s)	193, 412, 539, 705, 884, 1078
PmaCI	CACGTG	1 cut(s)	854
PmlI	CACGTG	1 cut(s)	854
Ppu21I	YACGTR	1 cut(s)	854
PpuMI	RGGWCCY	3 cut(s)	241, 586, 997
Psp5II	RGGWCCY	3 cut(s)	241, 586, 997
Psp6I	CCWGG	1 cut(s)	50
PspCI	CACGTG	1 cut(s)	854
PspFI	CCCAGC	1 cut(s)	513
PspGI	CCWGG	1 cut(s)	50
PspPPI	RGGWCCY	3 cut(s)	241, 586, 997
PsuI	RGATCY	2 cut(s)	830, 1102
PteI	GCGCGC	1 cut(s)	312
RruI	TCGCGA	1 cut(s)	381
RsaI	GTAC	3 cut(s)	395, 506, 1016
RsaNI	GTAC	3 cut(s)	394, 505, 1015
RseI	CAYNNNNRTG	1 cut(s)	254
SatI	GCNGC	6 cut(s)	192, 411, 538, 704, 883, 1077
Sau3AI	GATC	7 cut(s)	67, 264, 274, 663, 830, 937, 1102
SduI	GDGCHC	2 cut(s)	605, 1073
SfaNI	GCATC	1 cut(s)	756
SinI	GGWCC	8 cut(s)	241, 301, 336, 510, 586, 923, 946, 997
SmaI	CCCGGG	1 cut(s)	360
SmiMI	CAYNNNNRTG	1 cut(s)	254
SphI	GCATGC	1 cut(s)	417
SsiI	CCGC	7 cut(s)	161, 192, 427, 544, 689, 704, 806
SspMI	CTAG	1 cut(s)	1106
StyI	CCWWGG	1 cut(s)	613
TaaI	ACNGT	2 cut(s)	344, 473
TaiI	ACGT	2 cut(s)	856, 1089
TaqI	TCGA	7 cut(s)	180, 291, 480, 662, 764, 893, 1048
TaqII	GACCGA	1 cut(s)	353
TauI	GCSGC	2 cut(s)	194, 706
TscAI	CASTG	1 cut(s)	443
TseFI	GTSAC	2 cut(s)	449, 672
TseI	GCWGC	4 cut(s)	410, 537, 882, 1076
Tsp45I	GTSAC	2 cut(s)	449, 672
TspDTI	ATGAA	4 cut(s)	68, 272, 806, 812
TspGWI	ACGGA	1 cut(s)	159
TspMI	CCCGGG	1 cut(s)	358
TspRI	CASTG	1 cut(s)	443
VpaK11BI	GGWCC	8 cut(s)	241, 301, 336, 510, 586, 923, 946, 997
XceI	RCATGY	2 cut(s)	253, 417
XmaI	CCCGGG	1 cut(s)	358
XspI	CTAG	1 cut(s)	1106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.