pycom15g05920

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0003417
Physical Location & Seq
Reverse (-)
3579688 .. 3580809
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g05920.1

Sequence Viewer

Length: 1122 bp
ATGATGCTCGGAGAACCGACTCGAGTCCACCCGACTATCCAAGTCCCTCCCTGGGACTCATTTGACGATCATAACCCCACCTCACCCTTCCCCATCCCCATTCACTCCGTTAACTATAACGGCAATGCCTCCAACGGAGGAGACTTCTCCCCGCTCTCTCCAGTGTTCCTCGACTCCCTCGCCGCGCTCTACCGTTACCTCCCGTCGAACGAGTCCGACTCGCTAGCGGAGGACCCGGACATTCCCATGAACCCAATCTCCTGTGACCAGTTCCGGATGTTCGAGTTCAAGGTCCGGAGGTGCGCGCGCGGAAGGTCCCACGACTGGACCGACTGTCCGTACGCCCACCCGGGCGAGAAGGCCCGGCGTCGCGACCCGAGAAAGTACCACTACTCCGGTGCTGCATGTCCTGACTTCCGCAAGGGCCACTGCCCGAAGGGTGACTCGTGCGAGTTCGCTCACGGTGTTTTCGAGTGCTGGCTCCACCCGGCTAGGTACCGGACTCAGCCATGCAAGGACGGGTTGGGCTGCAACCGCCGCGTCTGCTTCTTTGCCCACACGCCCGAACAACTTCGGGTCCTTCCCGGGCAGAGCCCGAGAACCCAAGGGTCGGGAGCTTTCGACTCGTATCCATTTGGTTCGCCCCCCACCTCGATCCTGATGTCCCCTCCATTATCTCCGCCGTCTGAATCGCCGCCAATGTCGCCAAACAGTCCTCAAGTTGGCCATAACTCGGTTAGTGAACTCGTTGCTTCGATGCGAAACTTCAAGCTTGCTAAGATGAAAATGAACTCTCCGCCTGCATGGGGAGGCCAAATGGGATCCGGGTTCGGTCCGTCTCCACGTGGGTCCGCCTTCCGATCCGGTTTTTGCAGCCTTCCATCGACTCCGAGTCGTACAACGGGTCGGGTCGGACCGAACCCGGTTGATCTCTGGGATCAGCCTTGCGAGGAGGAGCCGGCAATGGAGAGGGTGGAGTCCGGGAGGGACCTCCGGGCAAGAATGTACGCGAGAATGTACGAGAGGCTGAGTAAGGAGAATTCTTTTGGCCGAGTCGCCTGTGTTGACTCTGGATCGTCAGCTCCGGATGTTGGATGGATTTCGGAGCTAGTCAGCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006355 GO:0006417 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0017148 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032870 GO:0034248 GO:0034249 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0044424 GO:0044464 GO:0045935 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903311 GO:1903313 GO:1903506 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

374

Amino Acids

41.23

Weight (kDa)

7.14

Isoelectric Point (pI)

68.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH_AtC3H23 PF25512 91 - 123 7e-21 AtC3H23-like, CCCH zinc finger
zf-CCCH PF00642 134 - 155 3.3e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 1 cut(s) 495
AccBSI CCGCTC 1 cut(s) 154
AccII CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
AccIII TCCGGA 3 cut(s) 273, 294, 1084
AclWI GGATC 6 cut(s) 649, 816, 829, 855, 945, 1081
AcoI YGGCCR 2 cut(s) 724, 1048
AcsI RAATTY 1 cut(s) 1039
AcvI CACGTG 1 cut(s) 845
AcyI GRCGYC 1 cut(s) 367
AfaI GTAC 6 cut(s) 341, 386, 497, 898, 1007, 1019
AfiI CCNNNNNNNGG 7 cut(s) 52, 324, 610, 722, 733, 806, 1091
AgsI TTSAA 2 cut(s) 289, 769
AhdI GACNNNNNGTC 2 cut(s) 333, 891
AjnI CCWGG 1 cut(s) 50
AloI GAACNNNNNNTCC 2 cut(s) 242, 274
AluBI AGCT 4 cut(s) 617, 772, 1082, 1108
AluI AGCT 4 cut(s) 617, 772, 1082, 1108
Alw26I GTCTC 2 cut(s) 135, 843
AlwI GGATC 6 cut(s) 649, 816, 829, 855, 945, 1081
Ama87I CYCGRG 5 cut(s) 21, 349, 376, 584, 595
Aor13HI TCCGGA 3 cut(s) 273, 294, 1084
AoxI GGCC 5 cut(s) 360, 424, 724, 811, 1048
ApeKI GCWGC 3 cut(s) 401, 528, 873
ApoI RAATTY 1 cut(s) 1039
Asp700I GAANNNNTTC 1 cut(s) 570
Asp718I GGTACC 1 cut(s) 495
AspLEI GCGC 4 cut(s) 187, 305, 307, 309
AsuHPI GGTGA 2 cut(s) 75, 452
AsuNHI GCTAGC 1 cut(s) 223
AvaI CYCGRG 5 cut(s) 21, 349, 376, 584, 595
AvaII GGWCC 9 cut(s) 232, 292, 315, 327, 577, 833, 849, 914, 988
BalI TGGCCA 1 cut(s) 726
BamHI GGATCC 1 cut(s) 821
BanI GGYRCC 1 cut(s) 495
BanII GRGCYC 1 cut(s) 596
BauI CACGAG 1 cut(s) 445
BbrPI CACGTG 1 cut(s) 845
BbvI GCAGC 3 cut(s) 388, 515, 885
BccI CCATC 3 cut(s) 101, 889, 1089
BceAI ACGGC 2 cut(s) 136, 667
BciT130I CCWGG 1 cut(s) 52
BciVI GTATCC 1 cut(s) 639
BcoDI GTCTC 2 cut(s) 135, 843
BfaI CTAG 3 cut(s) 224, 492, 1109
BfuI GTATCC 1 cut(s) 639
BisI GCNGC 6 cut(s) 183, 402, 529, 538, 695, 874
BlsI GCNGC 6 cut(s) 184, 403, 530, 539, 696, 875
Bme18I GGWCC 9 cut(s) 232, 292, 315, 327, 577, 833, 849, 914, 988
BmeRI GACNNNNNGTC 2 cut(s) 333, 891
BmeT110I CYCGRG 5 cut(s) 21, 349, 376, 584, 595
BmiI GGNNCC 9 cut(s) 234, 317, 482, 497, 578, 823, 850, 957, 989
BmsI GCATC 1 cut(s) 747
BmtI GCTAGC 1 cut(s) 227
BoxI GACNNNNGTC 1 cut(s) 23
BplI GAGNNNNNCTC 2 cut(s) 203, 235
BpmI CTGGAG 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 702
BsaAI YACGTR 1 cut(s) 845
BsaHI GRCGYC 1 cut(s) 367
BsaJI CCNNGG 5 cut(s) 50, 51, 349, 584, 604
BsaWI WCCGGW 6 cut(s) 273, 294, 395, 498, 863, 1084
BsaXI ACNNNNNCTCC 4 cut(s) 242, 272, 377, 407
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 324, 610, 722, 733, 806, 1091
Bse118I RCCGGY 1 cut(s) 958
Bse1I ACTGG 3 cut(s) 161, 268, 329
Bse3DI GCAATG 2 cut(s) 130, 969
BseAI TCCGGA 3 cut(s) 273, 294, 1084
BseBI CCWGG 1 cut(s) 52
BseDI CCNNGG 5 cut(s) 50, 51, 349, 584, 604
BseGI GGATG 4 cut(s) 93, 282, 1093, 1100
BseLI CCNNNNNNNGG 7 cut(s) 52, 324, 610, 722, 733, 806, 1091
BseMI GCAATG 2 cut(s) 130, 969
BseMII CTCAG 2 cut(s) 518, 1019
BseNI ACTGG 3 cut(s) 161, 268, 329
BsePI GCGCGC 2 cut(s) 303, 305
BseRI GAGGAG 3 cut(s) 153, 965, 968
BseXI GCAGC 3 cut(s) 388, 515, 885
Bsh1236I CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
BshFI GGCC 5 cut(s) 362, 426, 726, 813, 1050
BshNI GGYRCC 1 cut(s) 495
BsiHKCI CYCGRG 5 cut(s) 21, 349, 376, 584, 595
BsiWI CGTACG 1 cut(s) 339
BslFI GGGAC 5 cut(s) 29, 68, 301, 649, 1001
BslI CCNNNNNNNGG 7 cut(s) 52, 324, 610, 722, 733, 806, 1091
BsmAI GTCTC 2 cut(s) 135, 843
BsmBI CGTCTC 1 cut(s) 843
BsmFI GGGAC 5 cut(s) 29, 68, 301, 649, 1001
BsnI GGCC 5 cut(s) 362, 426, 726, 813, 1050
BsoBI CYCGRG 5 cut(s) 21, 349, 376, 584, 595
Bsp1286I GDGCHC 1 cut(s) 596
Bsp13I TCCGGA 3 cut(s) 273, 294, 1084
Bsp143I GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
Bsp68I TCGCGA 1 cut(s) 372
BspANI GGCC 5 cut(s) 362, 426, 726, 813, 1050
BspCNI CTCAG 2 cut(s) 517, 1020
BspEI TCCGGA 3 cut(s) 273, 294, 1084
BspFNI CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
BspLI GGNNCC 9 cut(s) 234, 317, 482, 497, 578, 823, 850, 957, 989
BspOI GCTAGC 1 cut(s) 227
BspPI GGATC 6 cut(s) 649, 816, 829, 855, 945, 1081
BspT107I GGYRCC 1 cut(s) 495
BsrBI CCGCTC 1 cut(s) 154
BsrDI GCAATG 2 cut(s) 130, 969
BsrFI RCCGGY 1 cut(s) 958
BsrI ACTGG 3 cut(s) 161, 268, 329
BssAI RCCGGY 1 cut(s) 958
BssECI CCNNGG 5 cut(s) 50, 51, 349, 584, 604
BssHII GCGCGC 2 cut(s) 303, 305
BssMI GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
BssNI GRCGYC 1 cut(s) 367
BssSI CACGAG 1 cut(s) 445
BssT1I CCWWGG 1 cut(s) 604
Bst2BI CACGAG 1 cut(s) 445
Bst2UI CCWGG 1 cut(s) 52
Bst4CI ACNGT 4 cut(s) 194, 335, 464, 713
BstACI GRCGYC 1 cut(s) 367
BstBAI YACGTR 1 cut(s) 845
BstC8I GCNNGC 7 cut(s) 225, 305, 307, 479, 774, 801, 960
BstDEI CTNAG 3 cut(s) 504, 777, 1028
BstF5I GGATG 4 cut(s) 93, 282, 1093, 1100
BstFNI CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
BstHHI GCGC 4 cut(s) 187, 305, 307, 309
BstKTI GATC 7 cut(s) 70, 657, 824, 863, 931, 940, 1076
BstMAI GTCTC 2 cut(s) 135, 843
BstMBI GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
BstMWI GCNNNNNNNGC 4 cut(s) 534, 537, 543, 703
BstNI CCWGG 1 cut(s) 52
BstNSI RCATGY 1 cut(s) 408
BstPAI GACNNNNGTC 1 cut(s) 23
BstUI CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
BstV1I GCAGC 3 cut(s) 388, 515, 885
BstX2I RGATCY 1 cut(s) 821
BstYI RGATCY 1 cut(s) 821
BsuI GTATCC 1 cut(s) 639
BsuRI GGCC 5 cut(s) 362, 426, 726, 813, 1050
BtsCI GGATG 4 cut(s) 93, 282, 1093, 1100
BtsI GCAGTG 1 cut(s) 427
BtsIMutI CAGTG 2 cut(s) 168, 427
BtuMI TCGCGA 1 cut(s) 372
Cac8I GCNNGC 7 cut(s) 225, 305, 307, 479, 774, 801, 960
CfoI GCGC 4 cut(s) 187, 305, 307, 309
Cfr10I RCCGGY 1 cut(s) 958
Cfr9I CCCGGG 2 cut(s) 349, 584
CpoI CGGWCCG 2 cut(s) 833, 914
CseI GACGC 2 cut(s) 356, 529
Csp6I GTAC 6 cut(s) 340, 385, 496, 897, 1006, 1018
CspI CGGWCCG 2 cut(s) 833, 914
CviAII CATG 4 cut(s) 247, 405, 510, 804
CviQI GTAC 6 cut(s) 340, 385, 496, 897, 1006, 1018
DdeI CTNAG 3 cut(s) 504, 777, 1028
DpnI GATC 7 cut(s) 69, 656, 823, 862, 930, 939, 1075
DpnII GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
DriI GACNNNNNGTC 2 cut(s) 333, 891
EaeI YGGCCR 2 cut(s) 724, 1048
Eam1105I GACNNNNNGTC 2 cut(s) 333, 891
EciI GGCGGA 3 cut(s) 669, 786, 841
Eco130I CCWWGG 1 cut(s) 604
Eco24I GRGCYC 1 cut(s) 596
Eco47I GGWCC 9 cut(s) 232, 292, 315, 327, 577, 833, 849, 914, 988
Eco72I CACGTG 1 cut(s) 845
Eco88I CYCGRG 5 cut(s) 21, 349, 376, 584, 595
EcoO109I RGGNCCY 4 cut(s) 232, 315, 577, 988
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 1 cut(s) 50
EcoT14I CCWWGG 1 cut(s) 604
EcoT38I GRGCYC 1 cut(s) 596
ErhI CCWWGG 1 cut(s) 604
Esp3I CGTCTC 1 cut(s) 843
FaeI CATG 4 cut(s) 250, 408, 513, 807
FaiI YATR 7 cut(s) 72, 117, 248, 406, 511, 729, 805
FaqI GGGAC 5 cut(s) 29, 68, 301, 649, 1001
FatI CATG 4 cut(s) 246, 404, 509, 803
FauI CCCGC 1 cut(s) 159
Fnu4HI GCNGC 6 cut(s) 183, 402, 529, 538, 695, 874
FokI GGATG 4 cut(s) 80, 289, 1100, 1107
FriOI GRGCYC 1 cut(s) 596
Fsp4HI GCNGC 6 cut(s) 183, 402, 529, 538, 695, 874
FspBI CTAG 3 cut(s) 224, 492, 1109
GlaI GCGC 4 cut(s) 186, 304, 306, 308
GluI GCNGC 6 cut(s) 183, 402, 529, 538, 695, 874
GsuI CTGGAG 1 cut(s) 144
HaeIII GGCC 5 cut(s) 362, 426, 726, 813, 1050
HgaI GACGC 2 cut(s) 356, 529
HhaI GCGC 4 cut(s) 187, 305, 307, 309
Hin1I GRCGYC 1 cut(s) 367
Hin1II CATG 4 cut(s) 250, 408, 513, 807
Hin6I GCGC 4 cut(s) 185, 303, 305, 307
HinP1I GCGC 4 cut(s) 185, 303, 305, 307
HincII GTYRAC 2 cut(s) 112, 1066
HindII GTYRAC 2 cut(s) 112, 1066
HindIII AAGCTT 1 cut(s) 770
HpaI GTTAAC 1 cut(s) 112
HphI GGTGA 2 cut(s) 75, 452
Hpy166II GTNNAC 4 cut(s) 28, 112, 743, 1066
Hpy188I TCNGA 7 cut(s) 11, 217, 688, 860, 891, 914, 1105
Hpy188III TCNNGA 8 cut(s) 274, 295, 371, 410, 612, 658, 1071, 1085
Hpy8I GTNNAC 4 cut(s) 28, 112, 743, 1066
Hpy99I CGWCG 2 cut(s) 208, 372
HpyAV CCTTC 7 cut(s) 97, 306, 352, 430, 590, 865, 887
HpyCH4III ACNGT 4 cut(s) 194, 335, 464, 713
HpyCH4IV ACGT 1 cut(s) 844
HpyCH4V TGCA 5 cut(s) 404, 513, 531, 803, 873
HpyF10VI GCNNNNNNNGC 4 cut(s) 534, 537, 543, 703
HpyF3I CTNAG 3 cut(s) 504, 777, 1028
HpySE526I ACGT 1 cut(s) 844
Hsp92I GRCGYC 1 cut(s) 367
Hsp92II CATG 4 cut(s) 250, 408, 513, 807
HspAI GCGC 4 cut(s) 185, 303, 305, 307
Kpn2I TCCGGA 3 cut(s) 273, 294, 1084
KpnI GGTACC 1 cut(s) 499
KroI GCCGGC 1 cut(s) 958
KroNI GCCGGC 1 cut(s) 960
KspAI GTTAAC 1 cut(s) 112
Kzo9I GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
LmnI GCTCC 5 cut(s) 486, 614, 955, 1087, 1105
Lsp1109I GCAGC 3 cut(s) 388, 515, 885
LweI GCATC 1 cut(s) 747
MaeI CTAG 3 cut(s) 224, 492, 1109
MaeII ACGT 1 cut(s) 844
MaeIII GTNAC 3 cut(s) 194, 263, 440
MalI GATC 7 cut(s) 69, 656, 823, 862, 930, 939, 1075
MauBI CGCGCGCG 1 cut(s) 305
MbiI CCGCTC 1 cut(s) 154
MboI GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
MflI RGATCY 1 cut(s) 821
MhlI GDGCHC 1 cut(s) 596
MlsI TGGCCA 1 cut(s) 726
MluCI AATT 1 cut(s) 1039
MluNI TGGCCA 1 cut(s) 726
MmeI TCCRAC 4 cut(s) 156, 240, 892, 1072
Mox20I TGGCCA 1 cut(s) 726
MroI TCCGGA 3 cut(s) 273, 294, 1084
MroNI GCCGGC 1 cut(s) 958
MroXI GAANNNNTTC 1 cut(s) 570
MscI TGGCCA 1 cut(s) 726
MseI TTAA 1 cut(s) 111
MslI CAYNNNNRTG 1 cut(s) 245
Msp20I TGGCCA 1 cut(s) 726
MvaI CCWGG 1 cut(s) 52
MvnI CGCG 7 cut(s) 185, 305, 307, 309, 372, 540, 1010
MwoI GCNNNNNNNGC 4 cut(s) 534, 537, 543, 703
NaeI GCCGGC 1 cut(s) 960
NdeII GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
NgoMIV GCCGGC 1 cut(s) 958
NheI GCTAGC 1 cut(s) 223
NlaIII CATG 4 cut(s) 250, 408, 513, 807
NlaIV GGNNCC 9 cut(s) 234, 317, 482, 497, 578, 823, 850, 957, 989
NmeAIII GCCGAG 1 cut(s) 1076
NmuCI GTSAC 2 cut(s) 263, 440
NruI TCGCGA 1 cut(s) 372
NspI RCATGY 1 cut(s) 408
PaeR7I CTCGAG 1 cut(s) 21
PasI CCCWGGG 1 cut(s) 51
PauI GCGCGC 2 cut(s) 303, 305
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 468
PdiI GCCGGC 1 cut(s) 960
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 1 cut(s) 689
Pfl23II CGTACG 1 cut(s) 339
PfoI TCCNGGA 1 cut(s) 980
PkrI GCNGC 6 cut(s) 184, 403, 530, 539, 696, 875
PmaCI CACGTG 1 cut(s) 845
PmlI CACGTG 1 cut(s) 845
Ppu21I YACGTR 1 cut(s) 845
PpuMI RGGWCCY 4 cut(s) 232, 315, 577, 988
PshAI GACNNNNGTC 1 cut(s) 23
Psp5II RGGWCCY 4 cut(s) 232, 315, 577, 988
Psp6I CCWGG 1 cut(s) 50
PspCI CACGTG 1 cut(s) 845
PspGI CCWGG 1 cut(s) 50
PspLI CGTACG 1 cut(s) 339
PspN4I GGNNCC 9 cut(s) 234, 317, 482, 497, 578, 823, 850, 957, 989
PspPPI RGGWCCY 4 cut(s) 232, 315, 577, 988
PspXI VCTCGAGB 1 cut(s) 21
PsuI RGATCY 1 cut(s) 821
PteI GCGCGC 2 cut(s) 303, 305
RruI TCGCGA 1 cut(s) 372
RsaI GTAC 6 cut(s) 341, 386, 497, 898, 1007, 1019
RsaNI GTAC 6 cut(s) 340, 385, 496, 897, 1006, 1018
RseI CAYNNNNRTG 1 cut(s) 245
Rsr2I CGGWCCG 2 cut(s) 833, 914
RsrII CGGWCCG 2 cut(s) 833, 914
SaqAI TTAA 1 cut(s) 111
SatI GCNGC 6 cut(s) 183, 402, 529, 538, 695, 874
Sau3AI GATC 7 cut(s) 67, 654, 821, 860, 928, 937, 1073
SduI GDGCHC 1 cut(s) 596
SfaNI GCATC 1 cut(s) 747
Sfr274I CTCGAG 1 cut(s) 21
SinI GGWCC 9 cut(s) 232, 292, 315, 327, 577, 833, 849, 914, 988
SlaI CTCGAG 1 cut(s) 21
SmaI CCCGGG 2 cut(s) 351, 586
SmiMI CAYNNNNRTG 1 cut(s) 245
SmlI CTYRAG 2 cut(s) 21, 717
SmoI CTYRAG 2 cut(s) 21, 717
Sse9I AATT 1 cut(s) 1039
SspMI CTAG 3 cut(s) 224, 492, 1109
StyI CCWWGG 1 cut(s) 604
TaaI ACNGT 4 cut(s) 194, 335, 464, 713
TaiI ACGT 1 cut(s) 847
TaqI TCGA 9 cut(s) 22, 171, 206, 282, 471, 621, 653, 755, 884
TaqII GACCGA 3 cut(s) 344, 821, 931
TasI AATT 1 cut(s) 1039
TauI GCSGC 3 cut(s) 185, 540, 697
TfiI GAWTC 1 cut(s) 689
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TscAI CASTG 2 cut(s) 168, 434
TseFI GTSAC 2 cut(s) 263, 440
TseI GCWGC 3 cut(s) 401, 528, 873
Tsp45I GTSAC 2 cut(s) 263, 440
TspDTI ATGAA 3 cut(s) 263, 797, 803
TspGWI ACGGA 4 cut(s) 97, 150, 327, 825
TspMI CCCGGG 2 cut(s) 349, 584
TspRI CASTG 2 cut(s) 168, 434
VpaK11BI GGWCC 9 cut(s) 232, 292, 315, 327, 577, 833, 849, 914, 988
XapI RAATTY 1 cut(s) 1039
XceI RCATGY 1 cut(s) 408
XhoI CTCGAG 1 cut(s) 21
XmaI CCCGGG 2 cut(s) 349, 584
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 3 cut(s) 224, 492, 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.