Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0001870

Physical Location & Seq

Genomic Coordinates Reverse (-)

5880509 .. 5885083

Gene Structure 4575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1072500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGAAACCCTAGCCGTTGGCTCCCGTCAACTGCCGTCAACTTTCGCGCCACCGTCAGCGGTCTCCGTTAACTTTCATAACAGAGCCTCCAGCTCTCTAGCTTTGCTTCGCGCCACTCCCCTTGTCCGTACATTGAGATGCTCGGCTCTCTTATCTCCCTCATTGGCCGACCAATCAGAGAAGTTTGTAGAAGCCTCGAAGAAGGGGAATTTAATTCCTCTATATCGGAGCATATTCTCGGATCATCTAACTCCTGTGCTTGCTTACCGGTGTCTGGTTAAGGAGGATGATAGAGATGCTCCAAGTTTTCTGTTTGAGTCAGTTGAGCCGGGTTCCAAAGACTCCAATGTTGGGCGGTACAGTGTTATTGGGGCCCAGCCATCCATTGAAATCGTAGCAAAAGAGAACATGGTTACCATTATGGACCATAGAGAAGGTTGTAGGACAGAGGAGATTGTGGAGGATCCAATGACTGTTCCTCGGAGAATCATGGAGGGATGGACACCCCAACTTCTTGATGAACTTCCAGAAGCATTTTGTGGCGGCTGGGTTGGTTTCTTCTCTTATGATACAGTACGTTATGTTGAGAAGAAAAAGCTGCCGTTTCCGAGTGCACCGCCAGATGACAGAAATCTTCCTGATGTTCATCTTGGTCTTTATGACGATGTGATAGTGTTCGATCATGTGGAGAAGAAAGCTCATGTAATTCACTGGGTGCAATTAGATCAATATTCTTCTGTTGGAGAGGCCTTCAATGATGGAATAAATAGATTGGAAACACTGGTATCTAGAGTGCATGACATTGTCACCCCGAGGCTGCCTGCAGGTTCAATAGAGTTCAACACTCAACATTTTGGTACTAAATTGGAGGACTCAAGCTTGACAAGTGAGGAATATAAGGAGGCAGTTTTGAAAGCTAAAGAACACATTCTAGCTGGGGATATATTTCAGATTGTATTAAGCCAGCGTTTTGAGAGGCGAACATTTGCAGACCCATTTGAAATTTACCGTGCATTGAGGATAGTTAATCCAAGTCCATATATGACTTATTTACAGGCTAGAGGCTGTATTTTGGTTGCGTCAAGTCCAGAAATTCTGACACATGTTAAGAAGCAAACGATCACCAACCGGCCTCTTGCTGGGACTGTTGGAAGAGGAAAAACACCTAAAGAAGATTTAATGCTGGAAAAGCAGCTTTTGAATGATGAAAAGCAATGTGCAGAGCATATTATGCTTGTAGATTTGGGGAGGAATGATGTCGGGAAGGTTTCAAAACCGGGTTCTGTCAAGGTTGAGAAGCTCATGAACATTGAGCGGTATTCCCATGTCATGCACATAAGTTCAACAGTCACGGGAGAGTTACGTGATGATTTAACTAGCTGGGATGTTCTGCGTACTGCGTTGCCGGTTGGGACTGTCAGTGGAGCACCAAAGGTGAAAGCCATGGAGCTGATCGATAAGCTGGAAGTGACTAGACGTGGTCCATACAGTGGTGGTTTTGGAGGAATTTCATTTTCTGGCAACATGGACATCGCTCTAGCTCTTAGAACTATTGTTTTCCCAACTAGTTTTCGGTATGATACAATGTATTCATACAAGGACGCAAACAAGCGCAGAGAGTGGGTTGCTCATCTTCAAGCCGGGGCTGGTATTGTCGCTGACAGCGATCCAGCTGACGAGCAGAGGGAGTGCGAGAACAAAGCTGCTGCTCTTGCGCGCGCAATTGACCTTGCAGAGTCCTCGTTCGTTGATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019438 GO:0019752 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

586

Amino Acids

65.19

Weight (kDa)

5.91

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	81 - 234	6.8e-29	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	296 - 567	2.7e-80	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001870)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29690 AT2G29690
fragaria_vesca	FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350
malus_domestica	MD00G1120400.v1.1 MD03G1072500.v1.1 MD11G1077400.v1.1 MD11G1078000.v1.1 MD11G1078700.v1.1
prunus_persica	Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1
pyrus_communis	pycom03g05870 pycom11g06530 pycom11g06550 pycom11g06580
rosa_chinensis	RchiOBHm_Chr2g0157091 RchiOBHm_Chr4g0399261 RchiOBHm_Chr5g0068931
rosa_laevigata	RLG00000036024
rosa_multiflora	Rmu_sc0003000.1_g000002 Rmu_sc0006282.1_g000030 Rmu_sc0042660.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011770
rosa_rugosa	Rorug01G0059300 Rorug01G0059400 Rorug07G0214300
rosa_samantha	Rh2BG537500 Rh2DG546300 Rh5AG451600 Rh5BG470700 Rh5CG493100 Rh5DG483500 Rh7BG347700 Rh7BG347800 Rh7DG336200 Rh7DG336300
rosa_wichuraiana	Rw2G031030 Rw2G043250 Rw5G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	815
AccB7I	CCANNNNNTGG	1 cut(s)	1490
AccBSI	CCGCTC	1 cut(s)	1315
AccII	CGCG	4 cut(s)	47, 111, 1717, 1719
AciI	CCGC	5 cut(s)	59, 355, 543, 617, 1315
AclWI	GGATC	4 cut(s)	249, 458, 471, 1661
AcoI	YGGCCR	1 cut(s)	165
AcsI	RAATTY	4 cut(s)	208, 1002, 1092, 1506
AdeI	CACNNNGTG	1 cut(s)	715
AfaI	GTAC	5 cut(s)	130, 359, 576, 859, 1396
AfiI	CCNNNNNNNGG	4 cut(s)	274, 351, 1139, 1490
AflIII	ACRYGT	1 cut(s)	1102
AgeI	ACCGGT	1 cut(s)	267
AhlI	ACTAGT	1 cut(s)	1565
AjiI	CACGTC	1 cut(s)	1478
Alw21I	GWGCWC	2 cut(s)	616, 1429
Alw26I	GTCTC	1 cut(s)	67
Alw44I	GTGCAC	1 cut(s)	612
AlwI	GGATC	4 cut(s)	249, 458, 471, 1661
Ama87I	CYCGRG	1 cut(s)	811
AoxI	GGCC	4 cut(s)	165, 372, 747, 1130
ApaI	GGGCCC	1 cut(s)	376
ApaLI	GTGCAC	1 cut(s)	612
ApeKI	GCWGC	5 cut(s)	598, 817, 1192, 1703, 1706
ApoI	RAATTY	4 cut(s)	208, 1002, 1092, 1506
AsiGI	ACCGGT	1 cut(s)	267
Asp700I	GAANNNNTTC	1 cut(s)	927
AspLEI	GCGC	6 cut(s)	49, 113, 1614, 1717, 1719, 1721
AspS9I	GGNCC	4 cut(s)	372, 373, 424, 1481
AsuC2I	CCSGG	3 cut(s)	330, 1278, 1642
AsuHPI	GGTGA	3 cut(s)	799, 1114, 1447
AvaI	CYCGRG	1 cut(s)	811
AvaII	GGWCC	2 cut(s)	424, 1481
BaeGI	GKGCMC	2 cut(s)	376, 616
BaeI	ACNNNNGTAYC	2 cut(s)	768, 801
BamHI	GGATCC	1 cut(s)	463
BanII	GRGCYC	1 cut(s)	376
Bbv12I	GWGCWC	2 cut(s)	616, 1429
BbvI	GCAGC	5 cut(s)	585, 804, 1204, 1690, 1693
BccI	CCATC	3 cut(s)	388, 492, 752
BceAI	ACGGC	2 cut(s)	19, 586
BcgI	CGANNNNNNTGC	2 cut(s)	1722, 1756
BcnI	CCSGG	3 cut(s)	330, 1278, 1642
BcoDI	GTCTC	1 cut(s)	67
BcuI	ACTAGT	1 cut(s)	1565
BfaI	CTAG	9 cut(s)	11, 98, 789, 932, 1059, 1377, 1473, 1538, 1566
BfmI	CTRYAG	1 cut(s)	822
BfuAI	ACCTGC	1 cut(s)	815
BisI	GCNGC	6 cut(s)	544, 599, 818, 1193, 1704, 1707
BlsI	GCNGC	6 cut(s)	545, 600, 819, 1194, 1705, 1708
Bme1390I	CCNGG	3 cut(s)	330, 1278, 1642
Bme18I	GGWCC	2 cut(s)	424, 1481
BmeT110I	CYCGRG	1 cut(s)	811
BmgBI	CACGTC	1 cut(s)	1478
BmgT120I	GGNCC	4 cut(s)	372, 373, 424, 1481
BmiI	GGNNCC	5 cut(s)	22, 334, 373, 374, 465
BmrFI	CCNGG	3 cut(s)	330, 1278, 1642
BmrI	ACTGGG	1 cut(s)	721
BmsI	GCATC	2 cut(s)	128, 286
BmuI	ACTGGG	1 cut(s)	721
BpmI	CTGGAG	1 cut(s)	73
BpuEI	CTTGAG	1 cut(s)	859
BpuMI	CCSGG	3 cut(s)	330, 1278, 1642
Bsa29I	ATCGAT	1 cut(s)	1455
BsaAI	YACGTR	1 cut(s)	1364
BsaBI	GATNNNNATC	1 cut(s)	645
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	4 cut(s)	479, 812, 1443, 1641
BsaWI	WCCGGW	1 cut(s)	267
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	4 cut(s)	274, 351, 1139, 1490
Bse118I	RCCGGY	3 cut(s)	267, 1128, 1405
Bse1I	ACTGG	2 cut(s)	716, 786
Bse3DI	GCAATG	1 cut(s)	1220
Bse8I	GATNNNNATC	1 cut(s)	645
BseCI	ATCGAT	1 cut(s)	1455
BseDI	CCNNGG	4 cut(s)	479, 812, 1443, 1641
BseGI	GGATG	4 cut(s)	292, 380, 503, 1390
BseJI	GATNNNNATC	1 cut(s)	645
BseLI	CCNNNNNNNGG	4 cut(s)	274, 351, 1139, 1490
BseMI	GCAATG	1 cut(s)	1220
BseNI	ACTGG	2 cut(s)	716, 786
BsePI	GCGCGC	2 cut(s)	1715, 1717
BseRI	GAGGAG	1 cut(s)	464
BseSI	GKGCMC	2 cut(s)	376, 616
BseXI	GCAGC	5 cut(s)	585, 804, 1204, 1690, 1693
BseYI	CCCAGC	5 cut(s)	375, 546, 935, 1139, 1380
BsgI	GTGCAG	1 cut(s)	1239
Bsh1236I	CGCG	4 cut(s)	47, 111, 1717, 1719
BshFI	GGCC	4 cut(s)	167, 374, 749, 1132
BshTI	ACCGGT	1 cut(s)	267
BshVI	ATCGAT	1 cut(s)	1455
BsiHKAI	GWGCWC	2 cut(s)	616, 1429
BsiHKCI	CYCGRG	1 cut(s)	811
BsiSI	CCGG	6 cut(s)	268, 329, 1129, 1277, 1406, 1641
BslFI	GGGAC	2 cut(s)	1156, 1426
BslI	CCNNNNNNNGG	4 cut(s)	274, 351, 1139, 1490
BsmAI	GTCTC	1 cut(s)	67
BsmFI	GGGAC	2 cut(s)	1156, 1426
BsnI	GGCC	4 cut(s)	167, 374, 749, 1132
Bso31I	GGTCTC	1 cut(s)	67
BsoBI	CYCGRG	1 cut(s)	811
Bsp120I	GGGCCC	1 cut(s)	372
Bsp1286I	GDGCHC	3 cut(s)	376, 616, 1429
Bsp143I	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
Bsp19I	CCATGG	1 cut(s)	1443
BspACI	CCGC	5 cut(s)	59, 355, 543, 617, 1315
BspANI	GGCC	4 cut(s)	167, 374, 749, 1132
BspDI	ATCGAT	1 cut(s)	1455
BspFNI	CGCG	4 cut(s)	47, 111, 1717, 1719
BspHI	TCATGA	1 cut(s)	1302
BspLI	GGNNCC	5 cut(s)	22, 334, 373, 374, 465
BspMAI	CTGCAG	1 cut(s)	826
BspMI	ACCTGC	1 cut(s)	815
BspPI	GGATC	4 cut(s)	249, 458, 471, 1661
BspTNI	GGTCTC	1 cut(s)	67
BsrBI	CCGCTC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	1220
BsrFI	RCCGGY	3 cut(s)	267, 1128, 1405
BsrI	ACTGG	2 cut(s)	716, 786
BssAI	RCCGGY	3 cut(s)	267, 1128, 1405
BssECI	CCNNGG	4 cut(s)	479, 812, 1443, 1641
BssHII	GCGCGC	2 cut(s)	1715, 1717
BssMI	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
BssT1I	CCWWGG	1 cut(s)	1443
Bst4CI	ACNGT	9 cut(s)	54, 362, 475, 574, 1010, 1147, 1348, 1417, 1490
Bst6I	CTCTTC	1 cut(s)	1147
BstAPI	GCANNNNNTGC	1 cut(s)	1231
BstBAI	YACGTR	1 cut(s)	1364
BstC8I	GCNNGC	5 cut(s)	261, 822, 965, 1717, 1719
BstDEI	CTNAG	1 cut(s)	1544
BstDSI	CCRYGG	1 cut(s)	1443
BstEII	GGTNACC	1 cut(s)	412
BstF5I	GGATG	4 cut(s)	292, 380, 503, 1390
BstFNI	CGCG	4 cut(s)	47, 111, 1717, 1719
BstHHI	GCGC	6 cut(s)	49, 113, 1614, 1717, 1719, 1721
BstKTI	GATC	7 cut(s)	244, 466, 682, 727, 1122, 1455, 1669
BstMAI	GTCTC	1 cut(s)	67
BstMBI	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
BstMWI	GCNNNNNNNGC	3 cut(s)	1189, 1231, 1712
BstNSI	RCATGY	1 cut(s)	1106
BstPI	GGTNACC	1 cut(s)	412
BstSCI	CCNGG	3 cut(s)	328, 1276, 1640
BstSFI	CTRYAG	1 cut(s)	822
BstSLI	GKGCMC	2 cut(s)	376, 616
BstUI	CGCG	4 cut(s)	47, 111, 1717, 1719
BstV1I	GCAGC	5 cut(s)	585, 804, 1204, 1690, 1693
BstX2I	RGATCY	1 cut(s)	463
BstYI	RGATCY	1 cut(s)	463
Bsu15I	ATCGAT	1 cut(s)	1455
BsuRI	GGCC	4 cut(s)	167, 374, 749, 1132
BsuTUI	ATCGAT	1 cut(s)	1455
BtgI	CCRYGG	1 cut(s)	1443
BtgZI	GCGATG	1 cut(s)	1516
BtrI	CACGTC	1 cut(s)	1478
BtsCI	GGATG	4 cut(s)	292, 380, 503, 1390
BtsIMutI	CAGTG	5 cut(s)	367, 709, 779, 1426, 1495
BveI	ACCTGC	1 cut(s)	815
Cac8I	GCNNGC	5 cut(s)	261, 822, 965, 1717, 1719
CciI	TCATGA	1 cut(s)	1302
CfoI	GCGC	6 cut(s)	49, 113, 1614, 1717, 1719, 1721
Cfr10I	RCCGGY	3 cut(s)	267, 1128, 1405
Cfr13I	GGNCC	4 cut(s)	372, 373, 424, 1481
ClaI	ATCGAT	1 cut(s)	1455
CseI	GACGC	2 cut(s)	1068, 1610
Csp6I	GTAC	5 cut(s)	129, 358, 575, 858, 1395
CspAI	ACCGGT	1 cut(s)	267
CspCI	CAANNNNNGTGG	2 cut(s)	103, 138
CviQI	GTAC	5 cut(s)	129, 358, 575, 858, 1395
DdeI	CTNAG	1 cut(s)	1544
DpnI	GATC	7 cut(s)	243, 465, 681, 726, 1121, 1454, 1668
DpnII	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
DraIII	CACNNNGTG	1 cut(s)	715
EaeI	YGGCCR	1 cut(s)	165
Eam1104I	CTCTTC	1 cut(s)	1147
EarI	CTCTTC	1 cut(s)	1147
Eco130I	CCWWGG	1 cut(s)	1443
Eco147I	AGGCCT	1 cut(s)	749
Eco24I	GRGCYC	1 cut(s)	376
Eco31I	GGTCTC	1 cut(s)	67
Eco47I	GGWCC	2 cut(s)	424, 1481
Eco88I	CYCGRG	1 cut(s)	811
Eco91I	GGTNACC	1 cut(s)	412
EcoO109I	RGGNCCY	1 cut(s)	372
EcoO65I	GGTNACC	1 cut(s)	412
EcoT14I	CCWWGG	1 cut(s)	1443
EcoT38I	GRGCYC	1 cut(s)	376
ErhI	CCWWGG	1 cut(s)	1443
FaqI	GGGAC	2 cut(s)	1156, 1426
Fnu4HI	GCNGC	6 cut(s)	544, 599, 818, 1193, 1704, 1707
FokI	GGATG	4 cut(s)	299, 367, 510, 1397
FriOI	GRGCYC	1 cut(s)	376
Fsp4HI	GCNGC	6 cut(s)	544, 599, 818, 1193, 1704, 1707
FspBI	CTAG	9 cut(s)	11, 98, 789, 932, 1059, 1377, 1473, 1538, 1566
GlaI	GCGC	6 cut(s)	48, 112, 1613, 1716, 1718, 1720
GluI	GCNGC	6 cut(s)	544, 599, 818, 1193, 1704, 1707
GsaI	CCCAGC	5 cut(s)	379, 550, 939, 1143, 1384
GsuI	CTGGAG	1 cut(s)	73
HaeIII	GGCC	4 cut(s)	167, 374, 749, 1132
HapII	CCGG	6 cut(s)	268, 329, 1129, 1277, 1406, 1641
HgaI	GACGC	2 cut(s)	1068, 1610
HhaI	GCGC	6 cut(s)	49, 113, 1614, 1717, 1719, 1721
Hin6I	GCGC	6 cut(s)	47, 111, 1612, 1715, 1717, 1719
HinP1I	GCGC	6 cut(s)	47, 111, 1612, 1715, 1717, 1719
HincII	GTYRAC	3 cut(s)	29, 39, 70
HindII	GTYRAC	3 cut(s)	29, 39, 70
HindIII	AAGCTT	1 cut(s)	877
HinfI	GANTC	5 cut(s)	317, 341, 486, 872, 1736
HpaI	GTTAAC	1 cut(s)	70
HpaII	CCGG	6 cut(s)	268, 329, 1129, 1277, 1406, 1641
HphI	GGTGA	3 cut(s)	799, 1114, 1447
Hpy166II	GTNNAC	4 cut(s)	29, 39, 70, 614
Hpy188I	TCNGA	7 cut(s)	178, 228, 241, 483, 609, 951, 1098
Hpy188III	TCNNGA	7 cut(s)	515, 527, 638, 789, 1088, 1261, 1303
Hpy8I	GTNNAC	4 cut(s)	29, 39, 70, 614
HpyAV	CCTTC	4 cut(s)	196, 428, 760, 1258
HpyCH4III	ACNGT	9 cut(s)	54, 362, 475, 574, 1010, 1147, 1348, 1417, 1490
HpyCH4IV	ACGT	3 cut(s)	577, 1363, 1477
HpyCH4V	TGCA	9 cut(s)	614, 718, 796, 824, 989, 1013, 1220, 1333, 1733
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1189, 1231, 1712
HpyF3I	CTNAG	1 cut(s)	1544
HpySE526I	ACGT	3 cut(s)	577, 1363, 1477
HspAI	GCGC	6 cut(s)	47, 111, 1612, 1715, 1717, 1719
KspAI	GTTAAC	1 cut(s)	70
Kzo9I	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
LmnI	GCTCC	5 cut(s)	26, 228, 304, 1424, 1447
Lsp1109I	GCAGC	5 cut(s)	585, 804, 1204, 1690, 1693
LweI	GCATC	2 cut(s)	128, 286
MaeI	CTAG	9 cut(s)	11, 98, 789, 932, 1059, 1377, 1473, 1538, 1566
MaeII	ACGT	3 cut(s)	577, 1363, 1477
MaeIII	GTNAC	5 cut(s)	412, 805, 1348, 1359, 1468
MalI	GATC	7 cut(s)	243, 465, 681, 726, 1121, 1454, 1668
MbiI	CCGCTC	1 cut(s)	1315
MboI	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
MboII	GAAGA	9 cut(s)	211, 550, 601, 626, 703, 726, 1164, 1184, 1625
MfeI	CAATTG	1 cut(s)	1722
MflI	RGATCY	1 cut(s)	463
MhlI	GDGCHC	3 cut(s)	376, 616, 1429
MluCI	AATT	9 cut(s)	208, 213, 705, 719, 863, 1002, 1092, 1506, 1722
MlyI	GAGTC	4 cut(s)	326, 335, 866, 1745
MmeI	TCCRAC	2 cut(s)	721, 1129
MroXI	GAANNNNTTC	1 cut(s)	927
MseI	TTAA	8 cut(s)	69, 212, 279, 959, 1026, 1107, 1178, 1373
MslI	CAYNNNNRTG	1 cut(s)	136
MspA1I	CMGCKG	2 cut(s)	59, 1673
MspI	CCGG	6 cut(s)	268, 329, 1129, 1277, 1406, 1641
MspR9I	CCNGG	3 cut(s)	330, 1278, 1642
MunI	CAATTG	1 cut(s)	1722
MvnI	CGCG	4 cut(s)	47, 111, 1717, 1719
MwoI	GCNNNNNNNGC	3 cut(s)	1189, 1231, 1712
NciI	CCSGG	3 cut(s)	330, 1278, 1642
NcoI	CCATGG	1 cut(s)	1443
NdeII	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
NlaIV	GGNNCC	5 cut(s)	22, 334, 373, 374, 465
NmeAIII	GCCGAG	1 cut(s)	122
NmuCI	GTSAC	3 cut(s)	805, 1348, 1468
NspI	RCATGY	1 cut(s)	1106
PagI	TCATGA	1 cut(s)	1302
PauI	GCGCGC	2 cut(s)	1715, 1717
PceI	AGGCCT	1 cut(s)	749
PciI	ACATGT	1 cut(s)	1102
PcsI	WCGNNNNNNNCGW	1 cut(s)	1662
PdmI	GAANNNNTTC	1 cut(s)	927
PfeI	GAWTC	1 cut(s)	486
PflFI	GACNNNGTC	2 cut(s)	803, 1479
PflMI	CCANNNNNTGG	1 cut(s)	1490
PinAI	ACCGGT	1 cut(s)	267
PkrI	GCNGC	6 cut(s)	545, 600, 819, 1194, 1705, 1708
PleI	GAGTC	4 cut(s)	325, 335, 866, 1744
PpsI	GAGTC	4 cut(s)	325, 335, 866, 1744
Ppu21I	YACGTR	1 cut(s)	1364
PscI	ACATGT	1 cut(s)	1102
PspEI	GGTNACC	1 cut(s)	412
PspFI	CCCAGC	5 cut(s)	375, 546, 935, 1139, 1380
PspN4I	GGNNCC	5 cut(s)	22, 334, 373, 374, 465
PspOMI	GGGCCC	1 cut(s)	372
PspPI	GGNCC	4 cut(s)	372, 373, 424, 1481
PstI	CTGCAG	1 cut(s)	826
PsuI	RGATCY	1 cut(s)	463
PsyI	GACNNNGTC	2 cut(s)	803, 1479
PteI	GCGCGC	2 cut(s)	1715, 1717
PvuII	CAGCTG	1 cut(s)	1673
RsaI	GTAC	5 cut(s)	130, 359, 576, 859, 1396
RsaNI	GTAC	5 cut(s)	129, 358, 575, 858, 1395
RseI	CAYNNNNRTG	1 cut(s)	136
SaqAI	TTAA	8 cut(s)	69, 212, 279, 959, 1026, 1107, 1178, 1373
SatI	GCNGC	6 cut(s)	544, 599, 818, 1193, 1704, 1707
Sau3AI	GATC	7 cut(s)	241, 463, 679, 724, 1119, 1452, 1666
Sau96I	GGNCC	4 cut(s)	372, 373, 424, 1481
SbfI	CCTGCAGG	1 cut(s)	826
SchI	GAGTC	4 cut(s)	326, 335, 866, 1745
ScrFI	CCNGG	3 cut(s)	330, 1278, 1642
SdaI	CCTGCAGG	1 cut(s)	826
SduI	GDGCHC	3 cut(s)	376, 616, 1429
SfaNI	GCATC	2 cut(s)	128, 286
SfcI	CTRYAG	1 cut(s)	822
SinI	GGWCC	2 cut(s)	424, 1481
SmiMI	CAYNNNNRTG	1 cut(s)	136
SmlI	CTYRAG	1 cut(s)	874
SmoI	CTYRAG	1 cut(s)	874
SpeI	ACTAGT	1 cut(s)	1565
Sse8387I	CCTGCAGG	1 cut(s)	826
Sse9I	AATT	9 cut(s)	208, 213, 705, 719, 863, 1002, 1092, 1506, 1722
SseBI	AGGCCT	1 cut(s)	749
SsiI	CCGC	5 cut(s)	59, 355, 543, 617, 1315
SspI	AATATT	1 cut(s)	731
SspMI	CTAG	9 cut(s)	11, 98, 789, 932, 1059, 1377, 1473, 1538, 1566
StuI	AGGCCT	1 cut(s)	749
StyD4I	CCNGG	3 cut(s)	328, 1276, 1640
StyI	CCWWGG	1 cut(s)	1443
TaaI	ACNGT	9 cut(s)	54, 362, 475, 574, 1010, 1147, 1348, 1417, 1490
TaiI	ACGT	3 cut(s)	580, 1366, 1480
TaqI	TCGA	3 cut(s)	197, 678, 1455
TasI	AATT	9 cut(s)	208, 213, 705, 719, 863, 1002, 1092, 1506, 1722
TauI	GCSGC	1 cut(s)	546
TfiI	GAWTC	1 cut(s)	486
Tru1I	TTAA	8 cut(s)	69, 212, 279, 959, 1026, 1107, 1178, 1373
Tru9I	TTAA	8 cut(s)	69, 212, 279, 959, 1026, 1107, 1178, 1373
TscAI	CASTG	5 cut(s)	367, 716, 786, 1426, 1495
TseFI	GTSAC	3 cut(s)	805, 1348, 1468
TseI	GCWGC	5 cut(s)	598, 817, 1192, 1703, 1706
Tsp45I	GTSAC	3 cut(s)	805, 1348, 1468
TspDTI	ATGAA	7 cut(s)	65, 534, 635, 1221, 1319, 1500, 1581
TspGWI	ACGGA	2 cut(s)	55, 116
TspRI	CASTG	5 cut(s)	367, 716, 786, 1426, 1495
Tth111I	GACNNNGTC	2 cut(s)	803, 1479
Van91I	CCANNNNNTGG	1 cut(s)	1490
VneI	GTGCAC	1 cut(s)	612
VpaK11BI	GGWCC	2 cut(s)	424, 1481
XapI	RAATTY	4 cut(s)	208, 1002, 1092, 1506
XbaI	TCTAGA	1 cut(s)	788
XceI	RCATGY	1 cut(s)	1106
XmnI	GAANNNNTTC	1 cut(s)	927
XspI	CTAG	9 cut(s)	11, 98, 789, 932, 1059, 1377, 1473, 1538, 1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.