Rh7DG336300

Anthranilate synthase alpha subunit 2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
43823535 .. 43827830
4296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG336300.1

Sequence Viewer

Length: 1257 bp
ATGCCGCAACGTCTTGATGAGATGCCAGAAGCATTTTGTGGTGGATGGGTTGGTTACTTCTCTTATGATACAGTGCGTTATGTGGAGAAGAAAAAGCTGCCATTCAGTGGTGCACCACCAGATGACAGAAATCTTCCTGATCTTCATCTTGGCCTGTATGATAGTGTGATAGTGTTTGATCATGTGGAGAAGAAAGCACATGTAATTCACTGGGTGCAATTAGATCGGTATTCTTCAGTTGAGGAGGCCTTCAATGATGGGATGAATAGATTGGAAACACTGGTATCTAGAGTGCATGACATTATCACCCCGAGGCTGCCTGCAGGTTCAATAAAGTTACACACTCATCTATTTGGTGCTAAATTGGAGGATTCAAACATGACAAGTGAGGAATACAAGGAAGCAGTTTTGAAATCTAAAGAACACATCTTAGCTGGGGATATATTTCAGATAGTATTAAGTCAGCGCTTTGAAAGGCGAACATTTGCAGACCCATTCGAAATTTACCGATCGTTAAGGATAGTTAATCCGAGTCCATACATGACTTATTTACAGGGTAGAGGCTGTATTCTGGTTGCTTCAAGTCCAGAAATTCTTACACGTGTTAAGAATAGAACAATCACCAATCGACCTCTTGCTGGGACTGTTAGAAGAGGAAAAACACCTAAAGAAGATCTAATGTTGGAAAATCAGCTTTTGAATGATGAAAAGCAATGCGCAGAGCACATTATGCTTGTTGACTTGGGGAGGAATGATGTCGGGAAGGTCTCAAAACCTGGTTCTGTCAAAGTTGAGAAGCTAATGAACATTGAGCGTTATTCCCATGTCATGCACATAAGTTCTACTGTCACTGGAGAGTTGCTTGATCATTTAAGTAGCTGGGATGTTCTACGAACTGCATTGCCGGTTGGGACTGTCAGCGGAGCACCAAAGGTAAAAGCCATGGAGCTGATTGATGAGCTGGAAGTGACTAGACGTGGTCCATACAGTGGCGGTTTTGGAGGAATTTCATTTTCTGGAAACATGGACATCGCCCTTGCTCTGAGAACTATTGTTTTCCCAACTAGCTTTCGATATGATACAATGTATTCATACAAGGACACAAATAAGCGGCGAGAGTGGGTTGCTCATCTCCAAGCCGGAGCTGGAATTGTGGCCGACAGTGTTCCAGCTGAGGAGCAGAGAGAGTGTGAGAACAAAGCTGCTGGTCTTGCACGGGCTATTGATCTTGCAGAGTCATCGTTTGTTGATAACTGA

Protein Analysis

418

Amino Acids

47.03

Weight (kDa)

6.25

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anth_synt_I_N PF04715 7 - 67 6.3e-16 Anthranilate synthase component I, N terminal region
Chorismate_bind PF00425 129 - 400 1.5e-79 chorismate binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 718
Acc36I ACCTGC 1 cut(s) 314
AccB7I CCANNNNNTGG 2 cut(s) 107, 989
AciI CCGC 4 cut(s) 5, 921, 993, 1111
AcoI YGGCCR 1 cut(s) 1155
AcsI RAATTY 3 cut(s) 501, 591, 1005
AcuI CTGAAG 1 cut(s) 219
AcvI CACGTG 1 cut(s) 602
AdeI CACNNNGTG 1 cut(s) 214
AfeI AGCGCT 1 cut(s) 467
AfiI CCNNNNNNNGG 3 cut(s) 107, 638, 989
AflIII ACRYGT 3 cut(s) 199, 599, 601
AgsI TTSAA 7 cut(s) 253, 330, 375, 412, 473, 582, 700
AjiI CACGTC 1 cut(s) 977
AjnI CCWGG 1 cut(s) 775
Alw21I GWGCWC 3 cut(s) 115, 726, 928
Alw26I GTCTC 1 cut(s) 772
Alw44I GTGCAC 1 cut(s) 111
Ama87I CYCGRG 1 cut(s) 310
Aor51HI AGCGCT 1 cut(s) 467
AoxI GGCC 3 cut(s) 151, 246, 1155
ApaLI GTGCAC 1 cut(s) 111
ApeKI GCWGC 3 cut(s) 97, 316, 1202
ApoI RAATTY 3 cut(s) 501, 591, 1005
AspLEI GCGC 2 cut(s) 468, 719
AspS9I GGNCC 1 cut(s) 980
AsuHPI GGTGA 2 cut(s) 298, 613
AsuII TTCGAA 1 cut(s) 498
AvaI CYCGRG 1 cut(s) 310
AvaII GGWCC 1 cut(s) 980
BaeGI GKGCMC 1 cut(s) 115
BaeI ACNNNNGTAYC 2 cut(s) 267, 300
BbrPI CACGTG 1 cut(s) 602
Bbv12I GWGCWC 3 cut(s) 115, 726, 928
BbvCI CCTCAGC 1 cut(s) 1173
BbvI GCAGC 3 cut(s) 84, 303, 1189
BccI CCATC 2 cut(s) 39, 251
BcgI CGANNNNNNTGC 4 cut(s) 206, 240, 1221, 1255
BciT130I CCWGG 1 cut(s) 777
BclI TGATCA 2 cut(s) 178, 865
BcoDI GTCTC 1 cut(s) 772
BfaI CTAG 3 cut(s) 288, 972, 1065
BfmI CTRYAG 1 cut(s) 321
BfoI RGCGCY 1 cut(s) 469
BfuAI ACCTGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 673
BisI GCNGC 5 cut(s) 5, 98, 317, 1112, 1203
BlsI GCNGC 5 cut(s) 6, 99, 318, 1113, 1204
Bme1390I CCNGG 1 cut(s) 777
Bme18I GGWCC 1 cut(s) 980
BmeT110I CYCGRG 1 cut(s) 310
BmgBI CACGTC 1 cut(s) 977
BmgT120I GGNCC 1 cut(s) 980
BmrFI CCNGG 1 cut(s) 777
BmrI ACTGGG 1 cut(s) 220
BmsI GCATC 1 cut(s) 12
BmuI ACTGGG 1 cut(s) 220
BpmI CTGGAG 1 cut(s) 873
Bpu10I CCTNAGC 1 cut(s) 1173
Bpu14I TTCGAA 1 cut(s) 498
BsaAI YACGTR 1 cut(s) 602
BsaBI GATNNNNATC 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 772
BsaJI CCNNGG 2 cut(s) 311, 942
Bsc4I CCNNNNNNNGG 3 cut(s) 107, 638, 989
Bse118I RCCGGY 1 cut(s) 904
Bse1I ACTGG 3 cut(s) 215, 285, 856
Bse3DI GCAATG 2 cut(s) 719, 899
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 1 cut(s) 777
BseDI CCNNGG 2 cut(s) 311, 942
BseGI GGATG 3 cut(s) 50, 267, 889
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 3 cut(s) 107, 638, 989
BseMI GCAATG 2 cut(s) 719, 899
BseMII CTCAG 2 cut(s) 1034, 1164
BseNI ACTGG 3 cut(s) 215, 285, 856
BseRI GAGGAG 2 cut(s) 257, 1190
BseSI GKGCMC 1 cut(s) 115
BseXI GCAGC 3 cut(s) 84, 303, 1189
BseYI CCCAGC 3 cut(s) 434, 638, 879
Bsh1285I CGRYCG 1 cut(s) 512
BshFI GGCC 3 cut(s) 153, 248, 1157
BsiEI CGRYCG 1 cut(s) 512
BsiHKAI GWGCWC 3 cut(s) 115, 726, 928
BsiHKCI CYCGRG 1 cut(s) 310
BsiSI CCGG 2 cut(s) 905, 1140
BslFI GGGAC 2 cut(s) 655, 925
BslI CCNNNNNNNGG 3 cut(s) 107, 638, 989
BsmAI GTCTC 1 cut(s) 772
BsmFI GGGAC 2 cut(s) 655, 925
BsnI GGCC 3 cut(s) 153, 248, 1157
Bso31I GGTCTC 1 cut(s) 772
BsoBI CYCGRG 1 cut(s) 310
Bsp119I TTCGAA 1 cut(s) 498
Bsp1286I GDGCHC 3 cut(s) 115, 726, 928
Bsp143I GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
Bsp19I CCATGG 1 cut(s) 942
BspACI CCGC 4 cut(s) 5, 921, 993, 1111
BspANI GGCC 3 cut(s) 153, 248, 1157
BspCNI CTCAG 2 cut(s) 1035, 1165
BspMAI CTGCAG 1 cut(s) 325
BspMI ACCTGC 1 cut(s) 314
BspT104I TTCGAA 1 cut(s) 498
BspTNI GGTCTC 1 cut(s) 772
BsrDI GCAATG 2 cut(s) 719, 899
BsrFI RCCGGY 1 cut(s) 904
BsrI ACTGG 3 cut(s) 215, 285, 856
BssAI RCCGGY 1 cut(s) 904
BssECI CCNNGG 2 cut(s) 311, 942
BssMI GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
BssT1I CCWWGG 1 cut(s) 942
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 6 cut(s) 73, 646, 847, 916, 989, 1163
Bst6I CTCTTC 1 cut(s) 646
BstAPI GCANNNNNTGC 1 cut(s) 730
BstBAI YACGTR 1 cut(s) 602
BstBI TTCGAA 1 cut(s) 498
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 3 cut(s) 430, 1043, 1173
BstDSI CCRYGG 1 cut(s) 942
BstF5I GGATG 3 cut(s) 50, 267, 889
BstH2I RGCGCY 1 cut(s) 469
BstHHI GCGC 2 cut(s) 468, 719
BstKTI GATC 7 cut(s) 142, 181, 226, 512, 676, 868, 1228
BstMAI GTCTC 1 cut(s) 772
BstMBI GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
BstMCI CGRYCG 1 cut(s) 512
BstMWI GCNNNNNNNGC 2 cut(s) 730, 1211
BstNI CCWGG 1 cut(s) 777
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 775
BstSFI CTRYAG 1 cut(s) 321
BstSLI GKGCMC 1 cut(s) 115
BstV1I GCAGC 3 cut(s) 84, 303, 1189
BstX2I RGATCY 1 cut(s) 673
BstYI RGATCY 1 cut(s) 673
BsuRI GGCC 3 cut(s) 153, 248, 1157
BtgI CCRYGG 1 cut(s) 942
BtgZI GCGATG 1 cut(s) 1015
BtrI CACGTC 1 cut(s) 977
BtsCI GGATG 3 cut(s) 50, 267, 889
BtsIMutI CAGTG 7 cut(s) 78, 112, 208, 278, 849, 994, 1168
BveI ACCTGC 1 cut(s) 314
Cac8I GCNNGC 1 cut(s) 321
CfoI GCGC 2 cut(s) 468, 719
Cfr10I RCCGGY 1 cut(s) 904
Cfr13I GGNCC 1 cut(s) 980
CsiI ACCWGGT 1 cut(s) 775
CviAII CATG 9 cut(s) 182, 200, 296, 379, 541, 824, 829, 943, 1024
DdeI CTNAG 3 cut(s) 430, 1043, 1173
DpnI GATC 7 cut(s) 141, 180, 225, 511, 675, 867, 1227
DpnII GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
DraIII CACNNNGTG 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 1155
Eam1104I CTCTTC 1 cut(s) 646
EarI CTCTTC 1 cut(s) 646
Eco130I CCWWGG 1 cut(s) 942
Eco147I AGGCCT 1 cut(s) 248
Eco31I GGTCTC 1 cut(s) 772
Eco47I GGWCC 1 cut(s) 980
Eco47III AGCGCT 1 cut(s) 467
Eco57I CTGAAG 1 cut(s) 219
Eco72I CACGTG 1 cut(s) 602
Eco88I CYCGRG 1 cut(s) 310
EcoRII CCWGG 1 cut(s) 775
EcoT14I CCWWGG 1 cut(s) 942
ErhI CCWWGG 1 cut(s) 942
FaeI CATG 9 cut(s) 185, 203, 299, 382, 544, 827, 832, 946, 1027
FaqI GGGAC 2 cut(s) 655, 925
FatI CATG 9 cut(s) 181, 199, 295, 378, 540, 823, 828, 942, 1023
FbaI TGATCA 2 cut(s) 178, 865
Fnu4HI GCNGC 5 cut(s) 5, 98, 317, 1112, 1203
FokI GGATG 3 cut(s) 57, 274, 896
Fsp4HI GCNGC 5 cut(s) 5, 98, 317, 1112, 1203
FspBI CTAG 3 cut(s) 288, 972, 1065
FspI TGCGCA 1 cut(s) 718
GlaI GCGC 2 cut(s) 467, 718
GluI GCNGC 5 cut(s) 5, 98, 317, 1112, 1203
GsaI CCCAGC 3 cut(s) 438, 642, 883
GsuI CTGGAG 1 cut(s) 873
HaeII RGCGCY 1 cut(s) 469
HaeIII GGCC 3 cut(s) 153, 248, 1157
HapII CCGG 2 cut(s) 905, 1140
HhaI GCGC 2 cut(s) 468, 719
Hin1II CATG 9 cut(s) 185, 203, 299, 382, 544, 827, 832, 946, 1027
Hin6I GCGC 2 cut(s) 466, 717
HinP1I GCGC 2 cut(s) 466, 717
HincII GTYRAC 1 cut(s) 739
HindII GTYRAC 1 cut(s) 739
HinfI GANTC 3 cut(s) 371, 532, 1235
HpaII CCGG 2 cut(s) 905, 1140
HphI GGTGA 2 cut(s) 298, 613
Hpy166II GTNNAC 2 cut(s) 113, 739
Hpy188I TCNGA 3 cut(s) 450, 531, 1044
Hpy188III TCNNGA 6 cut(s) 14, 137, 288, 587, 760, 1017
Hpy8I GTNNAC 2 cut(s) 113, 739
HpyAV CCTTC 2 cut(s) 259, 757
HpyCH4III ACNGT 6 cut(s) 73, 646, 847, 916, 989, 1163
HpyCH4IV ACGT 3 cut(s) 10, 601, 976
HpyCH4V TGCA 9 cut(s) 113, 217, 295, 323, 488, 832, 899, 1214, 1232
HpyF10VI GCNNNNNNNGC 2 cut(s) 730, 1211
HpyF3I CTNAG 3 cut(s) 430, 1043, 1173
HpySE526I ACGT 3 cut(s) 10, 601, 976
Hsp92II CATG 9 cut(s) 185, 203, 299, 382, 544, 827, 832, 946, 1027
HspAI GCGC 2 cut(s) 466, 717
Ksp22I TGATCA 2 cut(s) 178, 865
Kzo9I GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
LmnI GCTCC 4 cut(s) 923, 946, 1142, 1177
Lsp1109I GCAGC 3 cut(s) 84, 303, 1189
LweI GCATC 1 cut(s) 12
MabI ACCWGGT 1 cut(s) 775
MaeI CTAG 3 cut(s) 288, 972, 1065
MaeII ACGT 3 cut(s) 10, 601, 976
MaeIII GTNAC 4 cut(s) 53, 336, 847, 967
MalI GATC 7 cut(s) 141, 180, 225, 511, 675, 867, 1227
MboI GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
MboII GAAGA 7 cut(s) 100, 125, 134, 202, 225, 663, 683
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 3 cut(s) 115, 726, 928
MluCI AATT 7 cut(s) 204, 218, 362, 501, 591, 1005, 1149
MlyI GAGTC 2 cut(s) 541, 1244
MmeI TCCRAC 1 cut(s) 663
MseI TTAA 5 cut(s) 458, 515, 525, 606, 872
MspA1I CMGCKG 2 cut(s) 921, 1172
MspI CCGG 2 cut(s) 905, 1140
MspR9I CCNGG 1 cut(s) 777
MvaI CCWGG 1 cut(s) 777
MwoI GCNNNNNNNGC 2 cut(s) 730, 1211
NcoI CCATGG 1 cut(s) 942
NdeII GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
NlaIII CATG 9 cut(s) 185, 203, 299, 382, 544, 827, 832, 946, 1027
NmuCI GTSAC 2 cut(s) 847, 967
NsbI TGCGCA 1 cut(s) 718
NspI RCATGY 1 cut(s) 203
NspV TTCGAA 1 cut(s) 498
PceI AGGCCT 1 cut(s) 248
PciI ACATGT 1 cut(s) 199
PfeI GAWTC 1 cut(s) 371
PflFI GACNNNGTC 1 cut(s) 978
PflMI CCANNNNNTGG 2 cut(s) 107, 989
PkrI GCNGC 5 cut(s) 6, 99, 318, 1113, 1204
Ple19I CGATCG 1 cut(s) 512
PleI GAGTC 2 cut(s) 540, 1243
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
PpsI GAGTC 2 cut(s) 540, 1243
Ppu21I YACGTR 1 cut(s) 602
PscI ACATGT 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 775
PspCI CACGTG 1 cut(s) 602
PspFI CCCAGC 3 cut(s) 434, 638, 879
PspGI CCWGG 1 cut(s) 775
PspPI GGNCC 1 cut(s) 980
PstI CTGCAG 1 cut(s) 325
PsuI RGATCY 1 cut(s) 673
PsyI GACNNNGTC 1 cut(s) 978
PvuI CGATCG 1 cut(s) 512
PvuII CAGCTG 1 cut(s) 1172
SaqAI TTAA 5 cut(s) 458, 515, 525, 606, 872
SatI GCNGC 5 cut(s) 5, 98, 317, 1112, 1203
Sau3AI GATC 7 cut(s) 139, 178, 223, 509, 673, 865, 1225
Sau96I GGNCC 1 cut(s) 980
SbfI CCTGCAGG 1 cut(s) 325
SchI GAGTC 2 cut(s) 541, 1244
ScrFI CCNGG 1 cut(s) 777
SdaI CCTGCAGG 1 cut(s) 325
SduI GDGCHC 3 cut(s) 115, 726, 928
SexAI ACCWGGT 1 cut(s) 775
SfaNI GCATC 1 cut(s) 12
SfcI CTRYAG 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 498
SinI GGWCC 1 cut(s) 980
Sse8387I CCTGCAGG 1 cut(s) 325
Sse9I AATT 7 cut(s) 204, 218, 362, 501, 591, 1005, 1149
SseBI AGGCCT 1 cut(s) 248
SsiI CCGC 4 cut(s) 5, 921, 993, 1111
SspMI CTAG 3 cut(s) 288, 972, 1065
StuI AGGCCT 1 cut(s) 248
StyD4I CCNGG 1 cut(s) 775
StyI CCWWGG 1 cut(s) 942
TaaI ACNGT 6 cut(s) 73, 646, 847, 916, 989, 1163
TaiI ACGT 3 cut(s) 13, 604, 979
TaqI TCGA 3 cut(s) 498, 628, 1072
TasI AATT 7 cut(s) 204, 218, 362, 501, 591, 1005, 1149
TauI GCSGC 2 cut(s) 7, 1114
TfiI GAWTC 1 cut(s) 371
Tru1I TTAA 5 cut(s) 458, 515, 525, 606, 872
Tru9I TTAA 5 cut(s) 458, 515, 525, 606, 872
TscAI CASTG 7 cut(s) 78, 112, 215, 285, 856, 994, 1168
TseFI GTSAC 2 cut(s) 847, 967
TseI GCWGC 3 cut(s) 97, 316, 1202
Tsp45I GTSAC 2 cut(s) 847, 967
TspDTI ATGAA 6 cut(s) 134, 278, 720, 818, 999, 1080
TspRI CASTG 7 cut(s) 78, 112, 215, 285, 856, 994, 1168
Tth111I GACNNNGTC 1 cut(s) 978
Van91I CCANNNNNTGG 2 cut(s) 107, 989
VneI GTGCAC 1 cut(s) 111
VpaK11BI GGWCC 1 cut(s) 980
XapI RAATTY 3 cut(s) 501, 591, 1005
XbaI TCTAGA 1 cut(s) 287
XceI RCATGY 1 cut(s) 203
XcmI CCANNNNNNNNNTGG 1 cut(s) 1142
XspI CTAG 3 cut(s) 288, 972, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.