Rorug01G0059300

Anthranilate synthase alpha subunit 2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
9714153 .. 9717269
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0059300.1

Sequence Viewer

Length: 1248 bp
ATGGCCATGCTGTGCACCGCTGCTGGAAACAAATTCATGTTTTCAAACGAGAACAAATTGGTCAAGTCCTGGTGGCCTGCTAACTTCAAAAAGATGTTTCCAGACACCAACAAAGCAGACTTCTCCAAAGAGCCCATCCGAATGCGCATAGTCATATCAACATTTCTCAAGCCTGACGCTGTCCGAAAGCATATAGGTGTCGTGGATCAGGTCACCAAACACCATTTCGATACGCATTGGTCCTCGCTGGATAAAAAACAAGTGGTCAAATTTCACTCAGTAGCAAAGAAACTCGTCTTAAACATCGAGGATCCACAAGTGATTGCCAAGCTAGGGAAACCCATTCGGCATATAAATGCGGGGCTCGTTTCATTGCCAGTAGATCTGCCGGGCACCAACTTCAATAGAGCCATTAGAGCATCCAAGAAAATGAAGAAGGAAATTGAGAGTATGGTTGTGCAGAGGAAGATAGATCTCATGAATCTGAATTTGATTCATCGTGAACAATTAGTGAATGCACCACAAGATCTAATGTCTAGCTGGCTCATGGAGAGATATAGCGATGGAGAAGAGATGACGGAAGCGGACATTTCCGAAAAGTTGTGTGGTATAATACTTGCCGGTTATGACCCCATAATTAACACATTGTGTTCCACTGTCATCTTTCTATCACAGCTTCGTCCAGTTTATGATGCCGTCCTTAAAGAGCAAATGGAGATTGCAAAATCAAAAGATGAAGGAGAGTTGCTCAACTGGGGGGACATACAAAAGATGAAATATACATGGAACGTGAACCCGAAATACTTTCCAGATCCACACAAGTTTGAGCCGTCAAGGTTTGAAGGACAAGGACCACCTCCTTTCTCGTATGTTCCTTTTGGAGGAGGACCTCGAATGTGTCCCGGAAAAGAAAATGCCCGATTCCAGATATTGATTCAAGGGGAGATGGTTTTTCCTGACGAGAAGATGGTTGTGGACCGTGTTCCTTTTCCTACCCAAGGACTTCCTATTCATCTTTTCTTTGACAAAACAATCGAGAACAACTGCGTCCTTGGACTCAAACCCATCACTACAAAAAAGAATTCAATTAGCTTCACTATTTTGCGTCGGCGTGTAATAGCCGTCGCGAAAGGTGGATATTTTGCTTCGGCAAATTCACCCCGTCGCAAAGACACTAATCCCGTACGACGGCAAAACAACCCCGTCGCAAAAACACCAATCCCGTACGACGGCAAAACATCCCCGTGA

Protein Analysis

415

Amino Acids

47.2

Weight (kDa)

9.57

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 130 - 262 1.9e-08 Cytochrome P450
p450 PF00067 265 - 310 5.3e-10 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 146
AccB1I GGYRCC 1 cut(s) 392
AccII CGCG 1 cut(s) 1127
AciI CCGC 3 cut(s) 18, 359, 584
AclWI GGATC 4 cut(s) 213, 305, 318, 806
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 5 cut(s) 32, 269, 487, 1081, 1153
AdeI CACNNNGTG 1 cut(s) 648
AfaI GTAC 2 cut(s) 1185, 1226
AfiI CCNNNNNNNGG 5 cut(s) 333, 881, 998, 1188, 1229
AgsI TTSAA 6 cut(s) 45, 88, 403, 842, 938, 1086
AjnI CCWGG 1 cut(s) 68
AjuI GAANNNNNNNTTGG 2 cut(s) 209, 241
AluBI AGCT 4 cut(s) 331, 540, 676, 1092
AluI AGCT 4 cut(s) 331, 540, 676, 1092
Alw21I GWGCWC 1 cut(s) 17
Alw44I GTGCAC 1 cut(s) 13
AlwI GGATC 4 cut(s) 213, 305, 318, 806
AoxI GGCC 2 cut(s) 3, 74
ApaLI GTGCAC 1 cut(s) 13
ApeKI GCWGC 1 cut(s) 20
ApoI RAATTY 5 cut(s) 32, 269, 487, 1081, 1153
AspLEI GCGC 1 cut(s) 147
AspS9I GGNCC 4 cut(s) 240, 851, 887, 976
AsuC2I CCSGG 2 cut(s) 390, 903
AsuHPI GGTGA 2 cut(s) 205, 1149
AvaII GGWCC 4 cut(s) 240, 851, 887, 976
BaeGI GKGCMC 2 cut(s) 17, 395
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 310
BanI GGYRCC 1 cut(s) 392
BanII GRGCYC 2 cut(s) 135, 366
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 1 cut(s) 7
BccI CCATC 5 cut(s) 143, 557, 940, 961, 1073
BceAI ACGGC 5 cut(s) 680, 814, 1106, 1205, 1246
BciT130I CCWGG 1 cut(s) 70
BcnI CCSGG 2 cut(s) 390, 903
BfaI CTAG 2 cut(s) 332, 537
BglII AGATCT 3 cut(s) 382, 472, 526
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
Bme1390I CCNGG 3 cut(s) 70, 390, 903
Bme18I GGWCC 4 cut(s) 240, 851, 887, 976
BmgT120I GGNCC 4 cut(s) 240, 851, 887, 976
BmiI GGNNCC 2 cut(s) 312, 394
BmrFI CCNGG 3 cut(s) 70, 390, 903
BmrI ACTGGG 1 cut(s) 763
BmsI GCATC 2 cut(s) 428, 682
BmuI ACTGGG 1 cut(s) 763
BplI GAGNNNNNCTC 2 cut(s) 732, 764
BpuEI CTTGAG 1 cut(s) 152
BpuMI CCSGG 2 cut(s) 390, 903
BsaJI CCNNGG 2 cut(s) 997, 1051
Bsc4I CCNNNNNNNGG 5 cut(s) 333, 881, 998, 1188, 1229
Bse118I RCCGGY 1 cut(s) 620
Bse1I ACTGG 3 cut(s) 377, 683, 758
Bse3DI GCAATG 1 cut(s) 371
BseBI CCWGG 1 cut(s) 70
BseDI CCNNGG 2 cut(s) 997, 1051
BseGI GGATG 3 cut(s) 135, 419, 1238
BseLI CCNNNNNNNGG 5 cut(s) 333, 881, 998, 1188, 1229
BseMI GCAATG 1 cut(s) 371
BseMII CTCAG 1 cut(s) 291
BseNI ACTGG 3 cut(s) 377, 683, 758
BseRI GAGGAG 1 cut(s) 897
BseSI GKGCMC 2 cut(s) 17, 395
BseXI GCAGC 1 cut(s) 7
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 1 cut(s) 1127
BshFI GGCC 2 cut(s) 5, 76
BshNI GGYRCC 1 cut(s) 392
BsiHKAI GWGCWC 1 cut(s) 17
BsiSI CCGG 3 cut(s) 389, 621, 903
BsiWI CGTACG 2 cut(s) 1183, 1224
BslFI GGGAC 2 cut(s) 773, 885
BslI CCNNNNNNNGG 5 cut(s) 333, 881, 998, 1188, 1229
BsmFI GGGAC 2 cut(s) 773, 885
BsmI GAATGC 2 cut(s) 147, 520
BsnI GGCC 2 cut(s) 5, 76
Bsp1286I GDGCHC 4 cut(s) 17, 135, 366, 395
Bsp143I GATC 6 cut(s) 205, 310, 382, 472, 526, 811
Bsp68I TCGCGA 1 cut(s) 1127
BspACI CCGC 3 cut(s) 18, 359, 584
BspANI GGCC 2 cut(s) 5, 76
BspCNI CTCAG 1 cut(s) 290
BspFNI CGCG 1 cut(s) 1127
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 2 cut(s) 312, 394
BspPI GGATC 4 cut(s) 213, 305, 318, 806
BspT107I GGYRCC 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 371
BsrFI RCCGGY 1 cut(s) 620
BsrI ACTGG 3 cut(s) 377, 683, 758
BssAI RCCGGY 1 cut(s) 620
BssECI CCNNGG 2 cut(s) 997, 1051
BssMI GATC 6 cut(s) 205, 310, 382, 472, 526, 811
BssT1I CCWWGG 2 cut(s) 997, 1051
Bst2UI CCWGG 1 cut(s) 70
Bst4CI ACNGT 2 cut(s) 658, 980
Bst6I CTCTTC 1 cut(s) 564
BstC8I GCNNGC 2 cut(s) 78, 542
BstDEI CTNAG 1 cut(s) 277
BstEII GGTNACC 1 cut(s) 211
BstENI CCTNNNNNAGG 2 cut(s) 879, 996
BstF5I GGATG 3 cut(s) 135, 419, 1238
BstFNI CGCG 1 cut(s) 1127
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 6 cut(s) 208, 313, 385, 475, 529, 814
BstMBI GATC 6 cut(s) 205, 310, 382, 472, 526, 811
BstMWI GCNNNNNNNGC 1 cut(s) 416
BstNI CCWGG 1 cut(s) 70
BstPI GGTNACC 1 cut(s) 211
BstSCI CCNGG 3 cut(s) 68, 388, 901
BstSLI GKGCMC 2 cut(s) 17, 395
BstUI CGCG 1 cut(s) 1127
BstV1I GCAGC 1 cut(s) 7
BstX2I RGATCY 5 cut(s) 310, 382, 472, 526, 811
BstYI RGATCY 5 cut(s) 310, 382, 472, 526, 811
BsuRI GGCC 2 cut(s) 5, 76
BtgZI GCGATG 1 cut(s) 576
BtsCI GGATG 3 cut(s) 135, 419, 1238
BtsIMutI CAGTG 1 cut(s) 654
BtuMI TCGCGA 1 cut(s) 1127
Cac8I GCNNGC 2 cut(s) 78, 542
CciI TCATGA 1 cut(s) 477
CfoI GCGC 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 620
Cfr13I GGNCC 4 cut(s) 240, 851, 887, 976
CseI GACGC 3 cut(s) 185, 1036, 1094
Csp6I GTAC 2 cut(s) 1184, 1225
CviAII CATG 5 cut(s) 7, 37, 478, 547, 783
CviQI GTAC 2 cut(s) 1184, 1225
DdeI CTNAG 1 cut(s) 277
DpnI GATC 6 cut(s) 207, 312, 384, 474, 528, 813
DpnII GATC 6 cut(s) 205, 310, 382, 472, 526, 811
DraIII CACNNNGTG 1 cut(s) 648
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 564
EarI CTCTTC 1 cut(s) 564
Eco130I CCWWGG 2 cut(s) 997, 1051
Eco24I GRGCYC 2 cut(s) 135, 366
Eco47I GGWCC 4 cut(s) 240, 851, 887, 976
Eco91I GGTNACC 1 cut(s) 211
EcoNI CCTNNNNNAGG 2 cut(s) 879, 996
EcoO109I RGGNCCY 1 cut(s) 887
EcoO65I GGTNACC 1 cut(s) 211
EcoRI GAATTC 1 cut(s) 1081
EcoRII CCWGG 1 cut(s) 68
EcoT14I CCWWGG 2 cut(s) 997, 1051
EcoT38I GRGCYC 2 cut(s) 135, 366
ErhI CCWWGG 2 cut(s) 997, 1051
FaeI CATG 5 cut(s) 10, 40, 481, 550, 786
FaqI GGGAC 2 cut(s) 773, 885
FatI CATG 5 cut(s) 6, 36, 477, 546, 782
FauI CCCGC 1 cut(s) 352
Fnu4HI GCNGC 1 cut(s) 21
FokI GGATG 3 cut(s) 122, 406, 1225
FriOI GRGCYC 2 cut(s) 135, 366
Fsp4HI GCNGC 1 cut(s) 21
FspAI RTGCGCAY 1 cut(s) 146
FspBI CTAG 2 cut(s) 332, 537
FspI TGCGCA 1 cut(s) 146
GlaI GCGC 1 cut(s) 146
GluI GCNGC 1 cut(s) 21
HaeIII GGCC 2 cut(s) 5, 76
HapII CCGG 3 cut(s) 389, 621, 903
HgaI GACGC 3 cut(s) 185, 1036, 1094
HhaI GCGC 1 cut(s) 147
Hin1II CATG 5 cut(s) 10, 40, 481, 550, 786
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HinfI GANTC 5 cut(s) 481, 493, 921, 934, 1056
HpaII CCGG 3 cut(s) 389, 621, 903
HphI GGTGA 2 cut(s) 205, 1149
Hpy166II GTNNAC 4 cut(s) 15, 503, 793, 976
Hpy188I TCNGA 4 cut(s) 140, 185, 486, 595
Hpy188III TCNNGA 8 cut(s) 101, 478, 500, 809, 925, 956, 1036, 1126
Hpy8I GTNNAC 4 cut(s) 15, 503, 793, 976
Hpy99I CGWCG 6 cut(s) 1110, 1127, 1167, 1191, 1208, 1232
HpyAV CCTTC 3 cut(s) 430, 731, 836
HpyCH4III ACNGT 2 cut(s) 658, 980
HpyCH4IV ACGT 1 cut(s) 789
HpyCH4V TGCA 4 cut(s) 15, 460, 518, 722
HpyF10VI GCNNNNNNNGC 1 cut(s) 416
HpyF3I CTNAG 1 cut(s) 277
HpySE526I ACGT 1 cut(s) 789
Hsp92II CATG 5 cut(s) 10, 40, 481, 550, 786
HspAI GCGC 1 cut(s) 145
Kzo9I GATC 6 cut(s) 205, 310, 382, 472, 526, 811
Lsp1109I GCAGC 1 cut(s) 7
LweI GCATC 2 cut(s) 428, 682
MaeI CTAG 2 cut(s) 332, 537
MaeII ACGT 1 cut(s) 789
MaeIII GTNAC 1 cut(s) 211
MalI GATC 6 cut(s) 207, 312, 384, 474, 528, 813
MboI GATC 6 cut(s) 205, 310, 382, 472, 526, 811
MboII GAAGA 4 cut(s) 445, 478, 581, 976
MflI RGATCY 5 cut(s) 310, 382, 472, 526, 811
MhlI GDGCHC 4 cut(s) 17, 135, 366, 395
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1050
MnlI CCTC 7 cut(s) 253, 301, 456, 867, 875, 878, 900
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 299, 639, 702
MslI CAYNNNNRTG 4 cut(s) 140, 195, 354, 1243
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 20
MspI CCGG 3 cut(s) 389, 621, 903
MspR9I CCNGG 3 cut(s) 70, 390, 903
Mva1269I GAATGC 2 cut(s) 147, 520
MvaI CCWGG 1 cut(s) 70
MvnI CGCG 1 cut(s) 1127
MwoI GCNNNNNNNGC 1 cut(s) 416
NciI CCSGG 2 cut(s) 390, 903
NdeII GATC 6 cut(s) 205, 310, 382, 472, 526, 811
NlaIII CATG 5 cut(s) 10, 40, 481, 550, 786
NlaIV GGNNCC 2 cut(s) 312, 394
NmuCI GTSAC 1 cut(s) 211
NruI TCGCGA 1 cut(s) 1127
NsbI TGCGCA 1 cut(s) 146
PagI TCATGA 1 cut(s) 477
PctI GAATGC 2 cut(s) 147, 520
PfeI GAWTC 4 cut(s) 481, 493, 921, 934
Pfl23II CGTACG 2 cut(s) 1183, 1224
PflFI GACNNNGTC 1 cut(s) 179
PfoI TCCNGGA 1 cut(s) 901
PkrI GCNGC 1 cut(s) 22
PleI GAGTC 1 cut(s) 1050
PpsI GAGTC 1 cut(s) 1050
PpuMI RGGWCCY 1 cut(s) 887
Psp5II RGGWCCY 1 cut(s) 887
Psp6I CCWGG 1 cut(s) 68
PspEI GGTNACC 1 cut(s) 211
PspGI CCWGG 1 cut(s) 68
PspLI CGTACG 2 cut(s) 1183, 1224
PspN4I GGNNCC 2 cut(s) 312, 394
PspPI GGNCC 4 cut(s) 240, 851, 887, 976
PspPPI RGGWCCY 1 cut(s) 887
PsrI GAACNNNNNNTAC 2 cut(s) 785, 817
PsuI RGATCY 5 cut(s) 310, 382, 472, 526, 811
PsyI GACNNNGTC 1 cut(s) 179
RruI TCGCGA 1 cut(s) 1127
RsaI GTAC 2 cut(s) 1185, 1226
RsaNI GTAC 2 cut(s) 1184, 1225
RseI CAYNNNNRTG 4 cut(s) 140, 195, 354, 1243
SaqAI TTAA 3 cut(s) 299, 639, 702
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 6 cut(s) 205, 310, 382, 472, 526, 811
Sau96I GGNCC 4 cut(s) 240, 851, 887, 976
SchI GAGTC 1 cut(s) 1050
ScrFI CCNGG 3 cut(s) 70, 390, 903
SduI GDGCHC 4 cut(s) 17, 135, 366, 395
SfaNI GCATC 2 cut(s) 428, 682
SinI GGWCC 4 cut(s) 240, 851, 887, 976
SmiMI CAYNNNNRTG 4 cut(s) 140, 195, 354, 1243
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
SsiI CCGC 3 cut(s) 18, 359, 584
SspMI CTAG 2 cut(s) 332, 537
StyD4I CCNGG 3 cut(s) 68, 388, 901
StyI CCWWGG 2 cut(s) 997, 1051
TaaI ACNGT 2 cut(s) 658, 980
TaiI ACGT 1 cut(s) 792
TaqI TCGA 4 cut(s) 228, 306, 892, 1035
TfiI GAWTC 4 cut(s) 481, 493, 921, 934
Tru1I TTAA 3 cut(s) 299, 639, 702
Tru9I TTAA 3 cut(s) 299, 639, 702
TscAI CASTG 1 cut(s) 661
TseFI GTSAC 1 cut(s) 211
TseI GCWGC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 211
TspDTI ATGAA 8 cut(s) 25, 360, 446, 485, 494, 750, 788, 1001
TspGWI ACGGA 1 cut(s) 593
TspRI CASTG 1 cut(s) 661
Tth111I GACNNNGTC 1 cut(s) 179
VneI GTGCAC 1 cut(s) 13
VpaK11BI GGWCC 4 cut(s) 240, 851, 887, 976
XagI CCTNNNNNAGG 2 cut(s) 879, 996
XapI RAATTY 5 cut(s) 32, 269, 487, 1081, 1153
XspI CTAG 2 cut(s) 332, 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.