Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003000.1

Orthogroup ID

OG0001870

Physical Location & Seq

Genomic Coordinates Forward (+)

7800 .. 12773

Gene Structure 4974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003000.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

atggaaaccctagccgccgtcagctcccgtcagctgacgtcaactctcgcagtgccgtccaccgtcaccgtcaatttcaacggccgagtctccagctctctacctctgcttcgctccaccgcgcatgtccgttcactcagatgctccgctatttcgtctctttcagtagctgagcagtctgagaggtttttcgaggcttcgaaaaatgggaatttaattcctttatacataagtatattttcggatcacttaactcctgtgcttgcttaccggtgtctggttaaggaggatgatagagacgctccgagttttctttttgaggcagttgatccgggttccaaggactccaatgttgggcggtacagtattattggagcgcaaccaactattgagatcgtagcaaaagagaacatggttacagttatggaccatagaaaagggtgtaggacagaggagattgtggaggatccaatgactgttcctcagagaatcatggagggatggataccgcaacgtcttgatgagatgccagaagcattttgtggtggatgggttggttacttctcttatgatacagtgcgttatgtggagaagaaaaagctgccattcagtggtgcaccaccagatgacagaaatcttcctgatcttcatcttggcctgtatgatagtgtgatagtgtttgatcatgtggagaagaaagcacatgtaattcactgggtgcaattagatcagtattcttcagttgaggaggccttcaatgatgggatgaacagattggaaacactggtatctagagtgcatgacattatcaccccgaggctgcctgcaggttcaataaagttacacactcatctatttggtgctaaattggaggattcaaacatgacaagtgaggaatacaaggaagcagttttgaaatctaaagaacacatcttagctggggatatatttcagatagtattaagtcagcgctttgaaaggcgaacatttgcagacccattcgaaatttaccgatcgttaaggatagttaatccgagtccatacatgacttatttacagggtagaggctgtattctggttgcttcaagtccagaaattcttacacgtgttaagaatagaacaatcaccaatcgacctcttgctgggactgttagaagaggaaaaacacctaaagaagatctaatgttggaaaatcagcttttgaatgatgaaaagcaactggcagagcacattatgcttgttgacttggggaggaatgatgtcgggaaggtcactggagagttgcttgatcatttaagtagctgggatgttctacgaactgcattgccggttgggactgtcagcggagcaccaaaggtaaaagccatggagctgattgatgagctggaagtgactagacgtggtccatacagtggcggttttggaggaatttcattttctggaaacatggacatcgcccttgctctgagaactattgttttcccaactagctttcgatatgatacaatgtattcatacaaggacacaaataagcggcgagagtgggttgctcatctccaagccggagctggaattgtggccgacagtgttccagccgaggagcagagagagtgtgagaacaaagctgctggtcttgcacgggctatcgatcttgcagagtcatcgtttgttgataactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019438 GO:0019752 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

559

Amino Acids

62.44

Weight (kDa)

5.78

Isoelectric Point (pI)

41.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001870)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29690 AT2G29690
fragaria_vesca	FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350 FvH4_3g38350
malus_domestica	MD00G1120400.v1.1 MD03G1072500.v1.1 MD11G1077400.v1.1 MD11G1078000.v1.1 MD11G1078700.v1.1
prunus_persica	Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1 Prupe.6G059400_v2.0.a1
pyrus_communis	pycom03g05870 pycom11g06530 pycom11g06550 pycom11g06580
rosa_chinensis	RchiOBHm_Chr2g0157091 RchiOBHm_Chr4g0399261 RchiOBHm_Chr5g0068931
rosa_laevigata	RLG00000036024
rosa_multiflora	Rmu_sc0003000.1_g000002 Rmu_sc0006282.1_g000030 Rmu_sc0042660.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011770
rosa_rugosa	Rorug01G0059300 Rorug01G0059400 Rorug07G0214300
rosa_samantha	Rh2BG537500 Rh2DG546300 Rh5AG451600 Rh5BG470700 Rh5CG493100 Rh5DG483500 Rh7BG347700 Rh7BG347800 Rh7DG336200 Rh7DG336300
rosa_wichuraiana	Rw2G031030 Rw2G043250 Rw5G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	41
Acc36I	ACCTGC	1 cut(s)	818
AccB7I	CCANNNNNTGG	2 cut(s)	611, 1412
AccII	CGCG	1 cut(s)	122
AciI	CCGC	8 cut(s)	15, 120, 147, 358, 509, 1344, 1416, 1534
AclWI	GGATC	4 cut(s)	252, 323, 461, 474
AcoI	YGGCCR	2 cut(s)	82, 1578
AcsI	RAATTY	4 cut(s)	211, 1005, 1095, 1428
AcuI	CTGAAG	1 cut(s)	723
AcvI	CACGTG	1 cut(s)	1106
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	718
AfaI	GTAC	1 cut(s)	362
AfeI	AGCGCT	1 cut(s)	971
AfiI	CCNNNNNNNGG	5 cut(s)	277, 354, 611, 1142, 1412
AflIII	ACRYGT	3 cut(s)	703, 1103, 1105
AgeI	ACCGGT	1 cut(s)	270
AgsI	TTSAA	8 cut(s)	79, 757, 834, 879, 916, 977, 1086, 1204
AjiI	CACGTC	1 cut(s)	1400
Alw21I	GWGCWC	3 cut(s)	619, 1230, 1351
Alw26I	GTCTC	3 cut(s)	94, 162, 291
Alw44I	GTGCAC	1 cut(s)	615
AlwI	GGATC	4 cut(s)	252, 323, 461, 474
AlwNI	CAGNNNCTG	1 cut(s)	170
Ama87I	CYCGRG	1 cut(s)	814
Aor51HI	AGCGCT	1 cut(s)	971
AoxI	GGCC	4 cut(s)	82, 655, 750, 1578
ApaLI	GTGCAC	1 cut(s)	615
ApeKI	GCWGC	3 cut(s)	601, 820, 1625
ApoI	RAATTY	4 cut(s)	211, 1005, 1095, 1428
AsiGI	ACCGGT	1 cut(s)	270
AspLEI	GCGC	3 cut(s)	124, 379, 972
AspS9I	GGNCC	2 cut(s)	427, 1403
AsuC2I	CCSGG	1 cut(s)	333
AsuHPI	GGTGA	3 cut(s)	58, 802, 1117
AsuII	TTCGAA	2 cut(s)	200, 1002
AvaI	CYCGRG	1 cut(s)	814
AvaII	GGWCC	2 cut(s)	427, 1403
BaeGI	GKGCMC	1 cut(s)	619
BaeI	ACNNNNGTAYC	2 cut(s)	771, 804
BamHI	GGATCC	1 cut(s)	466
BbrPI	CACGTG	1 cut(s)	1106
Bbv12I	GWGCWC	3 cut(s)	619, 1230, 1351
BbvI	GCAGC	3 cut(s)	588, 807, 1612
BccI	CCATC	3 cut(s)	495, 543, 755
BceAI	ACGGC	3 cut(s)	2, 40, 97
BcgI	CGANNNNNNTGC	2 cut(s)	1644, 1678
BciVI	GTATCC	1 cut(s)	498
BclI	TGATCA	2 cut(s)	682, 1288
BcnI	CCSGG	1 cut(s)	333
BcoDI	GTCTC	3 cut(s)	94, 162, 291
BfaI	CTAG	4 cut(s)	11, 792, 1395, 1488
BfmI	CTRYAG	1 cut(s)	825
BfoI	RGCGCY	1 cut(s)	973
BfuAI	ACCTGC	1 cut(s)	818
BfuI	GTATCC	1 cut(s)	498
BglII	AGATCT	1 cut(s)	1177
BisI	GCNGC	5 cut(s)	15, 602, 821, 1535, 1626
BlpI	GCTNAGC	1 cut(s)	171
BlsI	GCNGC	5 cut(s)	16, 603, 822, 1536, 1627
Bme1390I	CCNGG	1 cut(s)	333
Bme18I	GGWCC	2 cut(s)	427, 1403
BmeT110I	CYCGRG	1 cut(s)	814
BmgBI	CACGTC	1 cut(s)	1400
BmgT120I	GGNCC	2 cut(s)	427, 1403
BmiI	GGNNCC	2 cut(s)	337, 468
BmrFI	CCNGG	1 cut(s)	333
BmrI	ACTGGG	1 cut(s)	724
BmsI	GCATC	2 cut(s)	131, 516
BmuI	ACTGGG	1 cut(s)	724
BpmI	CTGGAG	2 cut(s)	76, 1296
Bpu1102I	GCTNAGC	1 cut(s)	171
Bpu14I	TTCGAA	2 cut(s)	200, 1002
BpuMI	CCSGG	1 cut(s)	333
Bsa29I	ATCGAT	1 cut(s)	1647
BsaAI	YACGTR	1 cut(s)	1106
BsaBI	GATNNNNATC	1 cut(s)	648
BsaHI	GRCGYC	1 cut(s)	38
BsaJI	CCNNGG	4 cut(s)	339, 815, 1365, 1596
BsaWI	WCCGGW	1 cut(s)	270
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 354, 611, 1142, 1412
Bse118I	RCCGGY	2 cut(s)	270, 1327
Bse1I	ACTGG	4 cut(s)	719, 789, 1224, 1279
Bse3DI	GCAATG	1 cut(s)	1322
Bse8I	GATNNNNATC	1 cut(s)	648
BseCI	ATCGAT	1 cut(s)	1647
BseDI	CCNNGG	4 cut(s)	339, 815, 1365, 1596
BseGI	GGATG	5 cut(s)	295, 506, 554, 771, 1312
BseJI	GATNNNNATC	1 cut(s)	648
BseLI	CCNNNNNNNGG	5 cut(s)	277, 354, 611, 1142, 1412
BseMI	GCAATG	1 cut(s)	1322
BseMII	CTCAG	5 cut(s)	151, 162, 171, 497, 1457
BseNI	ACTGG	4 cut(s)	719, 789, 1224, 1279
BseRI	GAGGAG	3 cut(s)	467, 761, 1613
BseSI	GKGCMC	1 cut(s)	619
BseX3I	CGGCCG	1 cut(s)	82
BseXI	GCAGC	3 cut(s)	588, 807, 1612
BseYI	CCCAGC	3 cut(s)	938, 1142, 1302
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	2 cut(s)	85, 1016
BshFI	GGCC	4 cut(s)	84, 657, 752, 1580
BshTI	ACCGGT	1 cut(s)	270
BshVI	ATCGAT	1 cut(s)	1647
BsiEI	CGRYCG	2 cut(s)	85, 1016
BsiHKAI	GWGCWC	3 cut(s)	619, 1230, 1351
BsiHKCI	CYCGRG	1 cut(s)	814
BsiSI	CCGG	4 cut(s)	271, 332, 1328, 1563
BslFI	GGGAC	2 cut(s)	1159, 1348
BslI	CCNNNNNNNGG	5 cut(s)	277, 354, 611, 1142, 1412
BsmAI	GTCTC	3 cut(s)	94, 162, 291
BsmBI	CGTCTC	2 cut(s)	162, 291
BsmFI	GGGAC	2 cut(s)	1159, 1348
BsnI	GGCC	4 cut(s)	84, 657, 752, 1580
BsoBI	CYCGRG	1 cut(s)	814
Bsp119I	TTCGAA	2 cut(s)	200, 1002
Bsp1286I	GDGCHC	3 cut(s)	619, 1230, 1351
Bsp1720I	GCTNAGC	1 cut(s)	171
Bsp19I	CCATGG	1 cut(s)	1365
BspACI	CCGC	8 cut(s)	15, 120, 147, 358, 509, 1344, 1416, 1534
BspANI	GGCC	4 cut(s)	84, 657, 752, 1580
BspCNI	CTCAG	5 cut(s)	150, 163, 172, 496, 1458
BspDI	ATCGAT	1 cut(s)	1647
BspFNI	CGCG	1 cut(s)	122
BspLI	GGNNCC	2 cut(s)	337, 468
BspMAI	CTGCAG	1 cut(s)	829
BspMI	ACCTGC	1 cut(s)	818
BspPI	GGATC	4 cut(s)	252, 323, 461, 474
BspT104I	TTCGAA	2 cut(s)	200, 1002
BsrDI	GCAATG	1 cut(s)	1322
BsrFI	RCCGGY	2 cut(s)	270, 1327
BsrI	ACTGG	4 cut(s)	719, 789, 1224, 1279
BssAI	RCCGGY	2 cut(s)	270, 1327
BssECI	CCNNGG	4 cut(s)	339, 815, 1365, 1596
BssNI	GRCGYC	1 cut(s)	38
BssT1I	CCWWGG	2 cut(s)	339, 1365
Bst6I	CTCTTC	1 cut(s)	1150
BstACI	GRCGYC	1 cut(s)	38
BstAPI	GCANNNNNTGC	1 cut(s)	1234
BstBAI	YACGTR	1 cut(s)	1106
BstBI	TTCGAA	2 cut(s)	200, 1002
BstC8I	GCNNGC	2 cut(s)	264, 825
BstDEI	CTNAG	6 cut(s)	137, 171, 180, 483, 934, 1466
BstDSI	CCRYGG	1 cut(s)	1365
BstF5I	GGATG	5 cut(s)	295, 506, 554, 771, 1312
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	973
BstHHI	GCGC	3 cut(s)	124, 379, 972
BstMAI	GTCTC	3 cut(s)	94, 162, 291
BstMCI	CGRYCG	2 cut(s)	85, 1016
BstMWI	GCNNNNNNNGC	2 cut(s)	1234, 1634
BstNSI	RCATGY	2 cut(s)	128, 707
BstSCI	CCNGG	1 cut(s)	331
BstSFI	CTRYAG	1 cut(s)	825
BstSLI	GKGCMC	1 cut(s)	619
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	588, 807, 1612
BstX2I	RGATCY	2 cut(s)	466, 1177
BstYI	RGATCY	2 cut(s)	466, 1177
BstZI	CGGCCG	1 cut(s)	82
Bsu15I	ATCGAT	1 cut(s)	1647
BsuI	GTATCC	1 cut(s)	498
BsuRI	GGCC	4 cut(s)	84, 657, 752, 1580
BsuTUI	ATCGAT	1 cut(s)	1647
BtgI	CCRYGG	1 cut(s)	1365
BtgZI	GCGATG	1 cut(s)	1438
BtrI	CACGTC	1 cut(s)	1400
BtsCI	GGATG	5 cut(s)	295, 506, 554, 771, 1312
BtsI	GCAGTG	1 cut(s)	57
BtsIMutI	CAGTG	8 cut(s)	57, 582, 616, 712, 782, 1272, 1417, 1591
BveI	ACCTGC	1 cut(s)	818
Cac8I	GCNNGC	2 cut(s)	264, 825
CaiI	CAGNNNCTG	1 cut(s)	170
CfoI	GCGC	3 cut(s)	124, 379, 972
Cfr10I	RCCGGY	2 cut(s)	270, 1327
Cfr13I	GGNCC	2 cut(s)	427, 1403
ClaI	ATCGAT	1 cut(s)	1647
CseI	GACGC	1 cut(s)	308
Csp6I	GTAC	1 cut(s)	361
CspAI	ACCGGT	1 cut(s)	270
CviQI	GTAC	1 cut(s)	361
DdeI	CTNAG	6 cut(s)	137, 171, 180, 483, 934, 1466
DraIII	CACNNNGTG	1 cut(s)	718
EaeI	YGGCCR	2 cut(s)	82, 1578
EagI	CGGCCG	1 cut(s)	82
Eam1104I	CTCTTC	1 cut(s)	1150
EarI	CTCTTC	1 cut(s)	1150
EclXI	CGGCCG	1 cut(s)	82
Eco130I	CCWWGG	2 cut(s)	339, 1365
Eco147I	AGGCCT	1 cut(s)	752
Eco47I	GGWCC	2 cut(s)	427, 1403
Eco47III	AGCGCT	1 cut(s)	971
Eco52I	CGGCCG	1 cut(s)	82
Eco57I	CTGAAG	1 cut(s)	723
Eco72I	CACGTG	1 cut(s)	1106
Eco88I	CYCGRG	1 cut(s)	814
EcoT14I	CCWWGG	2 cut(s)	339, 1365
ErhI	CCWWGG	2 cut(s)	339, 1365
Esp3I	CGTCTC	2 cut(s)	162, 291
FaqI	GGGAC	2 cut(s)	1159, 1348
FbaI	TGATCA	2 cut(s)	682, 1288
Fnu4HI	GCNGC	5 cut(s)	15, 602, 821, 1535, 1626
FokI	GGATG	5 cut(s)	302, 513, 561, 778, 1319
Fsp4HI	GCNGC	5 cut(s)	15, 602, 821, 1535, 1626
FspBI	CTAG	4 cut(s)	11, 792, 1395, 1488
GlaI	GCGC	3 cut(s)	123, 378, 971
GluI	GCNGC	5 cut(s)	15, 602, 821, 1535, 1626
GsaI	CCCAGC	3 cut(s)	942, 1146, 1306
GsuI	CTGGAG	2 cut(s)	76, 1296
HaeII	RGCGCY	1 cut(s)	973
HaeIII	GGCC	4 cut(s)	84, 657, 752, 1580
HapII	CCGG	4 cut(s)	271, 332, 1328, 1563
HgaI	GACGC	1 cut(s)	308
HhaI	GCGC	3 cut(s)	124, 379, 972
Hin1I	GRCGYC	1 cut(s)	38
Hin6I	GCGC	3 cut(s)	122, 377, 970
HinP1I	GCGC	3 cut(s)	122, 377, 970
HincII	GTYRAC	2 cut(s)	42, 1243
HindII	GTYRAC	2 cut(s)	42, 1243
HinfI	GANTC	6 cut(s)	87, 344, 489, 875, 1036, 1658
HpaII	CCGG	4 cut(s)	271, 332, 1328, 1563
HphI	GGTGA	3 cut(s)	58, 802, 1117
Hpy166II	GTNNAC	5 cut(s)	42, 60, 134, 617, 1243
Hpy188I	TCNGA	8 cut(s)	140, 181, 244, 306, 486, 954, 1035, 1467
Hpy188III	TCNNGA	6 cut(s)	518, 641, 792, 1091, 1264, 1440
Hpy8I	GTNNAC	5 cut(s)	42, 60, 134, 617, 1243
HpyAV	CCTTC	2 cut(s)	763, 1261
HpyCH4IV	ACGT	4 cut(s)	38, 514, 1105, 1399
HpyCH4V	TGCA	8 cut(s)	617, 721, 799, 827, 992, 1322, 1637, 1655
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1234, 1634
HpyF3I	CTNAG	6 cut(s)	137, 171, 180, 483, 934, 1466
HpySE526I	ACGT	4 cut(s)	38, 514, 1105, 1399
Hsp92I	GRCGYC	1 cut(s)	38
HspAI	GCGC	3 cut(s)	122, 377, 970
Ksp22I	TGATCA	2 cut(s)	682, 1288
LmnI	GCTCC	9 cut(s)	29, 119, 149, 307, 374, 1346, 1369, 1565, 1600
Lsp1109I	GCAGC	3 cut(s)	588, 807, 1612
LweI	GCATC	2 cut(s)	131, 516
MaeI	CTAG	4 cut(s)	11, 792, 1395, 1488
MaeII	ACGT	4 cut(s)	38, 514, 1105, 1399
MaeIII	GTNAC	6 cut(s)	64, 415, 557, 840, 1270, 1390
MboII	GAAGA	7 cut(s)	604, 629, 638, 706, 729, 1167, 1187
MflI	RGATCY	2 cut(s)	466, 1177
MhlI	GDGCHC	3 cut(s)	619, 1230, 1351
MlyI	GAGTC	4 cut(s)	96, 338, 1045, 1667
MmeI	TCCRAC	1 cut(s)	1167
MseI	TTAA	8 cut(s)	215, 251, 282, 962, 1019, 1029, 1110, 1295
MslI	CAYNNNNRTG	1 cut(s)	139
MspA1I	CMGCKG	2 cut(s)	34, 1344
MspI	CCGG	4 cut(s)	271, 332, 1328, 1563
MspR9I	CCNGG	1 cut(s)	333
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	2 cut(s)	1234, 1634
NciI	CCSGG	1 cut(s)	333
NcoI	CCATGG	1 cut(s)	1365
NlaIV	GGNNCC	2 cut(s)	337, 468
NmeAIII	GCCGAG	2 cut(s)	110, 1621
NmuCI	GTSAC	3 cut(s)	64, 1270, 1390
NspI	RCATGY	2 cut(s)	128, 707
NspV	TTCGAA	2 cut(s)	200, 1002
PceI	AGGCCT	1 cut(s)	752
PciI	ACATGT	1 cut(s)	703
PfeI	GAWTC	2 cut(s)	489, 875
PflFI	GACNNNGTC	1 cut(s)	1401
PflMI	CCANNNNNTGG	2 cut(s)	611, 1412
PinAI	ACCGGT	1 cut(s)	270
PkrI	GCNGC	5 cut(s)	16, 603, 822, 1536, 1627
Ple19I	CGATCG	1 cut(s)	1016
PleI	GAGTC	4 cut(s)	95, 338, 1044, 1666
PmaCI	CACGTG	1 cut(s)	1106
PmlI	CACGTG	1 cut(s)	1106
PpsI	GAGTC	4 cut(s)	95, 338, 1044, 1666
Ppu21I	YACGTR	1 cut(s)	1106
PscI	ACATGT	1 cut(s)	703
PspCI	CACGTG	1 cut(s)	1106
PspFI	CCCAGC	3 cut(s)	938, 1142, 1302
PspN4I	GGNNCC	2 cut(s)	337, 468
PspPI	GGNCC	2 cut(s)	427, 1403
PstI	CTGCAG	1 cut(s)	829
PstNI	CAGNNNCTG	1 cut(s)	170
PsuI	RGATCY	2 cut(s)	466, 1177
PsyI	GACNNNGTC	1 cut(s)	1401
PvuI	CGATCG	1 cut(s)	1016
PvuII	CAGCTG	1 cut(s)	34
RsaI	GTAC	1 cut(s)	362
RsaNI	GTAC	1 cut(s)	361
RseI	CAYNNNNRTG	1 cut(s)	139
SaqAI	TTAA	8 cut(s)	215, 251, 282, 962, 1019, 1029, 1110, 1295
SatI	GCNGC	5 cut(s)	15, 602, 821, 1535, 1626
Sau96I	GGNCC	2 cut(s)	427, 1403
SbfI	CCTGCAGG	1 cut(s)	829
SchI	GAGTC	4 cut(s)	96, 338, 1045, 1667
ScrFI	CCNGG	1 cut(s)	333
SdaI	CCTGCAGG	1 cut(s)	829
SduI	GDGCHC	3 cut(s)	619, 1230, 1351
SfaNI	GCATC	2 cut(s)	131, 516
SfcI	CTRYAG	1 cut(s)	825
SfuI	TTCGAA	2 cut(s)	200, 1002
SinI	GGWCC	2 cut(s)	427, 1403
SmiMI	CAYNNNNRTG	1 cut(s)	139
Sse8387I	CCTGCAGG	1 cut(s)	829
SseBI	AGGCCT	1 cut(s)	752
SsiI	CCGC	8 cut(s)	15, 120, 147, 358, 509, 1344, 1416, 1534
SspMI	CTAG	4 cut(s)	11, 792, 1395, 1488
StuI	AGGCCT	1 cut(s)	752
StyD4I	CCNGG	1 cut(s)	331
StyI	CCWWGG	2 cut(s)	339, 1365
TaiI	ACGT	4 cut(s)	41, 517, 1108, 1402
TaqI	TCGA	6 cut(s)	192, 200, 1002, 1132, 1495, 1647
TauI	GCSGC	2 cut(s)	17, 1537
TfiI	GAWTC	2 cut(s)	489, 875
Tru1I	TTAA	8 cut(s)	215, 251, 282, 962, 1019, 1029, 1110, 1295
Tru9I	TTAA	8 cut(s)	215, 251, 282, 962, 1019, 1029, 1110, 1295
TscAI	CASTG	8 cut(s)	57, 582, 616, 719, 789, 1279, 1417, 1591
TseFI	GTSAC	3 cut(s)	64, 1270, 1390
TseI	GCWGC	3 cut(s)	601, 820, 1625
Tsp45I	GTSAC	3 cut(s)	64, 1270, 1390
TspDTI	ATGAA	5 cut(s)	638, 782, 1224, 1422, 1503
TspGWI	ACGGA	1 cut(s)	119
TspRI	CASTG	8 cut(s)	57, 582, 616, 719, 789, 1279, 1417, 1591
Tth111I	GACNNNGTC	1 cut(s)	1401
Van91I	CCANNNNNTGG	2 cut(s)	611, 1412
VneI	GTGCAC	1 cut(s)	615
VpaK11BI	GGWCC	2 cut(s)	427, 1403
XapI	RAATTY	4 cut(s)	211, 1005, 1095, 1428
XbaI	TCTAGA	1 cut(s)	791
XceI	RCATGY	2 cut(s)	128, 707
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1565
XspI	CTAG	4 cut(s)	11, 792, 1395, 1488
ZraI	GACGTC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.