pycom03g05870

Anthranilate synthase alpha subunit 2, chloroplastic-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
4630617 .. 4633507
2891 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g05870.5

Sequence Viewer

Length: 1158 bp
ATGGAAACCCTAGCCGTTGGCTCCCGTCAACTGCTGTCAACTTTCGCGTCACCATCAGCGGTCTCCGTTAACTTTCATAACAGAGCCTCCAGCTCTCTATCTTTGCTTCGCGCCACTCCCCTTGTCCGTACATTGAGATGCTCGGCTCTCTTATCTCCCTCATTGGCCGACCAATCAGAGAAGTTTGTAGAAGCCTCGAAGAAGGGGAATTTAATTCCTCTATATCGGAGCATATTCTCGGATCGATCAGTGGTAACTCCAGTGCTTGCTTACCGGTGTCTGGTTAAGGAGGATGATAGAGATGCTCCAAGTTTTCTGTTTGAGTCAGTTGAGCCCGGTTCCAAAGACTCCAATGTTGGGCGGTACAGCGTAATTGGGGCCCAACCATCCATCGAAATTGTAGCAAAAGAGAACATGGTTACCATTATGGACCATAGAGAAGGTTGTAGGACAGAGGAGATTGTGGAGGATCCAATGACTGTTCCTCGGAGAATCATGGAGGGATGGACACCCCAACTTCTTGATGAACTTCCAGAAGCATTTTGTGGCGGCTGGGTTGGTTTCTTCTCTTATGATACAGTACGTTATGTTGAGAAGAAAAAGCTGCCGTTTCCGAGTGCACCGCCGGATGACAGAAATCTTCCTGATGTTCATCTTGGTCTTTATGACGATGTGATTGTGTTTGATCATGTGGAGAAGAAAGCTCATGTAATTCACTGGGTGCAATTAGATCAATATTCTTCTGTTGAGGAGGCCTTCAATGATGGAATAAATAGATTGGAAACACTGGTATCTAGAGTGCATGACATTGTCACCCCGAGGCTGCCTGCAGGTTCAATAGAGTTCAACACTCAACATTTTGGTACTAAATTGGAGGACTCAAGCTTGACAAGTGAGGAATATAAGGAGGCAGTTTTGAAAGCTAAAGAACACATTCTAGCTGGGGATATATTTCAGATTGTATTAAGCCAGCGTTTTGAGAGGCGAACATTTGCAGACCCTTTTGAAATTTACCGAGCATTGAGGATAGTTAATCCAAGTCCATATATGACTTATTTACAGGCTAGAGGCTGTATTTTGGTTGCGTCAAGTCCAGAAATTCTGACACGTGTCAAGAAGCAAACGATCGACCAACCGGCCTCTTGCTGGGACTGTTAG

Protein Analysis

386

Amino Acids

43.36

Weight (kDa)

5.49

Isoelectric Point (pI)

51.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 821
AccII CGCG 2 cut(s) 47, 111
AciI CCGC 4 cut(s) 59, 361, 549, 623
AclWI GGATC 3 cut(s) 249, 464, 477
AcoI YGGCCR 1 cut(s) 165
AcsI RAATTY 3 cut(s) 208, 1008, 1098
AcvI CACGTG 1 cut(s) 1109
AdeI CACNNNGTG 1 cut(s) 721
AfaI GTAC 4 cut(s) 130, 365, 582, 865
AfiI CCNNNNNNNGG 3 cut(s) 280, 357, 1146
AflIII ACRYGT 2 cut(s) 1106, 1108
AgeI ACCGGT 1 cut(s) 273
AgsI TTSAA 5 cut(s) 760, 837, 847, 919, 1007
AluBI AGCT 6 cut(s) 93, 604, 704, 885, 923, 941
AluI AGCT 6 cut(s) 93, 604, 704, 885, 923, 941
Alw21I GWGCWC 1 cut(s) 622
Alw26I GTCTC 1 cut(s) 67
Alw44I GTGCAC 1 cut(s) 618
AlwI GGATC 3 cut(s) 249, 464, 477
Ama87I CYCGRG 1 cut(s) 817
AoxI GGCC 4 cut(s) 165, 378, 753, 1137
ApaI GGGCCC 1 cut(s) 382
ApaLI GTGCAC 1 cut(s) 618
ApeKI GCWGC 2 cut(s) 604, 823
ApoI RAATTY 3 cut(s) 208, 1008, 1098
AsiGI ACCGGT 1 cut(s) 273
Asp700I GAANNNNTTC 1 cut(s) 933
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 3 cut(s) 378, 379, 430
AsuC2I CCSGG 1 cut(s) 336
AsuHPI GGTGA 2 cut(s) 42, 805
AvaI CYCGRG 1 cut(s) 817
AvaII GGWCC 1 cut(s) 430
BaeGI GKGCMC 2 cut(s) 382, 622
BaeI ACNNNNGTAYC 2 cut(s) 774, 807
BamHI GGATCC 1 cut(s) 469
BanII GRGCYC 2 cut(s) 336, 382
BbrPI CACGTG 1 cut(s) 1109
Bbv12I GWGCWC 1 cut(s) 622
BbvI GCAGC 2 cut(s) 591, 810
BccI CCATC 5 cut(s) 61, 394, 398, 498, 758
BceAI ACGGC 1 cut(s) 592
BclI TGATCA 1 cut(s) 685
BcnI CCSGG 1 cut(s) 336
BcoDI GTCTC 1 cut(s) 67
BfaI CTAG 4 cut(s) 11, 795, 938, 1065
BfmI CTRYAG 1 cut(s) 828
BfuAI ACCTGC 1 cut(s) 821
BisI GCNGC 3 cut(s) 550, 605, 824
BlsI GCNGC 3 cut(s) 551, 606, 825
Bme1390I CCNGG 1 cut(s) 336
Bme18I GGWCC 1 cut(s) 430
BmeT110I CYCGRG 1 cut(s) 817
BmgT120I GGNCC 3 cut(s) 378, 379, 430
BmiI GGNNCC 5 cut(s) 22, 340, 379, 380, 471
BmrFI CCNGG 1 cut(s) 336
BmrI ACTGGG 1 cut(s) 727
BmsI GCATC 2 cut(s) 128, 292
BmuI ACTGGG 1 cut(s) 727
BoxI GACNNNNGTC 1 cut(s) 1109
BpmI CTGGAG 2 cut(s) 73, 243
BpuEI CTTGAG 1 cut(s) 865
BpuMI CCSGG 1 cut(s) 336
Bsa29I ATCGAT 1 cut(s) 244
BsaAI YACGTR 1 cut(s) 1109
BsaBI GATNNNNATC 1 cut(s) 651
BsaI GGTCTC 1 cut(s) 67
BsaJI CCNNGG 2 cut(s) 485, 818
BsaWI WCCGGW 1 cut(s) 273
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 357, 1146
Bse118I RCCGGY 2 cut(s) 273, 1135
Bse1I ACTGG 3 cut(s) 260, 722, 792
Bse8I GATNNNNATC 1 cut(s) 651
BseCI ATCGAT 1 cut(s) 244
BseDI CCNNGG 2 cut(s) 485, 818
BseGI GGATG 4 cut(s) 298, 386, 509, 634
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 3 cut(s) 280, 357, 1146
BseNI ACTGG 3 cut(s) 260, 722, 792
BseRI GAGGAG 2 cut(s) 470, 764
BseSI GKGCMC 2 cut(s) 382, 622
BseXI GCAGC 2 cut(s) 591, 810
BseYI CCCAGC 3 cut(s) 552, 941, 1146
Bsh1236I CGCG 2 cut(s) 47, 111
Bsh1285I CGRYCG 1 cut(s) 1128
BshFI GGCC 4 cut(s) 167, 380, 755, 1139
BshTI ACCGGT 1 cut(s) 273
BshVI ATCGAT 1 cut(s) 244
BsiEI CGRYCG 1 cut(s) 1128
BsiHKAI GWGCWC 1 cut(s) 622
BsiHKCI CYCGRG 1 cut(s) 817
BsiSI CCGG 4 cut(s) 274, 336, 626, 1136
BslI CCNNNNNNNGG 3 cut(s) 280, 357, 1146
BsmAI GTCTC 1 cut(s) 67
BsnI GGCC 4 cut(s) 167, 380, 755, 1139
Bso31I GGTCTC 1 cut(s) 67
BsoBI CYCGRG 1 cut(s) 817
Bsp120I GGGCCC 1 cut(s) 378
Bsp1286I GDGCHC 3 cut(s) 336, 382, 622
Bsp143I GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
BspACI CCGC 4 cut(s) 59, 361, 549, 623
BspANI GGCC 4 cut(s) 167, 380, 755, 1139
BspDI ATCGAT 1 cut(s) 244
BspFNI CGCG 2 cut(s) 47, 111
BspLI GGNNCC 5 cut(s) 22, 340, 379, 380, 471
BspMAI CTGCAG 1 cut(s) 832
BspMI ACCTGC 1 cut(s) 821
BspPI GGATC 3 cut(s) 249, 464, 477
BspTNI GGTCTC 1 cut(s) 67
BsrFI RCCGGY 2 cut(s) 273, 1135
BsrI ACTGG 3 cut(s) 260, 722, 792
BssAI RCCGGY 2 cut(s) 273, 1135
BssECI CCNNGG 2 cut(s) 485, 818
BssMI GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
Bst4CI ACNGT 3 cut(s) 481, 580, 1154
BstBAI YACGTR 1 cut(s) 1109
BstC8I GCNNGC 3 cut(s) 267, 828, 971
BstEII GGTNACC 1 cut(s) 418
BstF5I GGATG 4 cut(s) 298, 386, 509, 634
BstFNI CGCG 2 cut(s) 47, 111
BstHHI GCGC 1 cut(s) 113
BstKTI GATC 6 cut(s) 244, 248, 472, 688, 733, 1128
BstMAI GTCTC 1 cut(s) 67
BstMBI GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
BstMCI CGRYCG 1 cut(s) 1128
BstPAI GACNNNNGTC 1 cut(s) 1109
BstPI GGTNACC 1 cut(s) 418
BstSCI CCNGG 1 cut(s) 334
BstSFI CTRYAG 1 cut(s) 828
BstSLI GKGCMC 2 cut(s) 382, 622
BstUI CGCG 2 cut(s) 47, 111
BstV1I GCAGC 2 cut(s) 591, 810
BstX2I RGATCY 1 cut(s) 469
BstYI RGATCY 1 cut(s) 469
Bsu15I ATCGAT 1 cut(s) 244
BsuRI GGCC 4 cut(s) 167, 380, 755, 1139
BsuTUI ATCGAT 1 cut(s) 244
BtsCI GGATG 4 cut(s) 298, 386, 509, 634
BtsIMutI CAGTG 4 cut(s) 255, 267, 715, 785
BveI ACCTGC 1 cut(s) 821
Cac8I GCNNGC 3 cut(s) 267, 828, 971
CfoI GCGC 1 cut(s) 113
Cfr10I RCCGGY 2 cut(s) 273, 1135
Cfr13I GGNCC 3 cut(s) 378, 379, 430
ClaI ATCGAT 1 cut(s) 244
CseI GACGC 2 cut(s) 36, 1074
Csp6I GTAC 4 cut(s) 129, 364, 581, 864
CspAI ACCGGT 1 cut(s) 273
CspCI CAANNNNNGTGG 2 cut(s) 103, 138
CviAII CATG 5 cut(s) 415, 496, 689, 707, 803
CviQI GTAC 4 cut(s) 129, 364, 581, 864
DpnI GATC 6 cut(s) 243, 247, 471, 687, 732, 1127
DpnII GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
DraIII CACNNNGTG 1 cut(s) 721
EaeI YGGCCR 1 cut(s) 165
Eco147I AGGCCT 1 cut(s) 755
Eco24I GRGCYC 2 cut(s) 336, 382
Eco31I GGTCTC 1 cut(s) 67
Eco47I GGWCC 1 cut(s) 430
Eco72I CACGTG 1 cut(s) 1109
Eco88I CYCGRG 1 cut(s) 817
Eco91I GGTNACC 1 cut(s) 418
EcoO109I RGGNCCY 1 cut(s) 378
EcoO65I GGTNACC 1 cut(s) 418
EcoT38I GRGCYC 2 cut(s) 336, 382
FaeI CATG 5 cut(s) 418, 499, 692, 710, 806
FatI CATG 5 cut(s) 414, 495, 688, 706, 802
FbaI TGATCA 1 cut(s) 685
Fnu4HI GCNGC 3 cut(s) 550, 605, 824
FokI GGATG 4 cut(s) 305, 373, 516, 641
FriOI GRGCYC 2 cut(s) 336, 382
Fsp4HI GCNGC 3 cut(s) 550, 605, 824
FspBI CTAG 4 cut(s) 11, 795, 938, 1065
GlaI GCGC 1 cut(s) 112
GluI GCNGC 3 cut(s) 550, 605, 824
GsaI CCCAGC 3 cut(s) 556, 945, 1150
GsuI CTGGAG 2 cut(s) 73, 243
HaeIII GGCC 4 cut(s) 167, 380, 755, 1139
HapII CCGG 4 cut(s) 274, 336, 626, 1136
HgaI GACGC 2 cut(s) 36, 1074
HhaI GCGC 1 cut(s) 113
Hin1II CATG 5 cut(s) 418, 499, 692, 710, 806
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 3 cut(s) 29, 39, 70
HindII GTYRAC 3 cut(s) 29, 39, 70
HindIII AAGCTT 1 cut(s) 883
HinfI GANTC 4 cut(s) 323, 347, 492, 878
HpaI GTTAAC 1 cut(s) 70
HpaII CCGG 4 cut(s) 274, 336, 626, 1136
HphI GGTGA 2 cut(s) 42, 805
Hpy166II GTNNAC 4 cut(s) 29, 39, 70, 620
Hpy188I TCNGA 7 cut(s) 178, 228, 241, 489, 615, 957, 1104
Hpy188III TCNNGA 6 cut(s) 521, 533, 644, 795, 1094, 1114
Hpy8I GTNNAC 4 cut(s) 29, 39, 70, 620
HpyAV CCTTC 3 cut(s) 196, 434, 766
HpyCH4III ACNGT 3 cut(s) 481, 580, 1154
HpyCH4IV ACGT 2 cut(s) 583, 1108
HpyCH4V TGCA 5 cut(s) 620, 724, 802, 830, 995
HpySE526I ACGT 2 cut(s) 583, 1108
Hsp92II CATG 5 cut(s) 418, 499, 692, 710, 806
HspAI GCGC 1 cut(s) 111
Ksp22I TGATCA 1 cut(s) 685
KspAI GTTAAC 1 cut(s) 70
Kzo9I GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
LmnI GCTCC 3 cut(s) 26, 228, 310
Lsp1109I GCAGC 2 cut(s) 591, 810
LweI GCATC 2 cut(s) 128, 292
MaeI CTAG 4 cut(s) 11, 795, 938, 1065
MaeII ACGT 2 cut(s) 583, 1108
MaeIII GTNAC 4 cut(s) 48, 253, 418, 811
MalI GATC 6 cut(s) 243, 247, 471, 687, 732, 1127
MboI GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
MboII GAAGA 6 cut(s) 211, 556, 607, 632, 709, 732
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 3 cut(s) 336, 382, 622
MluCI AATT 9 cut(s) 208, 213, 372, 396, 711, 725, 869, 1008, 1098
MlyI GAGTC 3 cut(s) 332, 341, 872
MroXI GAANNNNTTC 1 cut(s) 933
MseI TTAA 5 cut(s) 69, 212, 285, 965, 1032
MslI CAYNNNNRTG 1 cut(s) 136
MspA1I CMGCKG 1 cut(s) 59
MspI CCGG 4 cut(s) 274, 336, 626, 1136
MspR9I CCNGG 1 cut(s) 336
MvnI CGCG 2 cut(s) 47, 111
NciI CCSGG 1 cut(s) 336
NdeII GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
NlaIII CATG 5 cut(s) 418, 499, 692, 710, 806
NlaIV GGNNCC 5 cut(s) 22, 340, 379, 380, 471
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 48, 811
PceI AGGCCT 1 cut(s) 755
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 1 cut(s) 492
PflFI GACNNNGTC 1 cut(s) 809
PinAI ACCGGT 1 cut(s) 273
PkrI GCNGC 3 cut(s) 551, 606, 825
Ple19I CGATCG 1 cut(s) 1128
PleI GAGTC 3 cut(s) 331, 341, 872
PmaCI CACGTG 1 cut(s) 1109
PmlI CACGTG 1 cut(s) 1109
PpsI GAGTC 3 cut(s) 331, 341, 872
Ppu21I YACGTR 1 cut(s) 1109
PshAI GACNNNNGTC 1 cut(s) 1109
PspCI CACGTG 1 cut(s) 1109
PspEI GGTNACC 1 cut(s) 418
PspFI CCCAGC 3 cut(s) 552, 941, 1146
PspN4I GGNNCC 5 cut(s) 22, 340, 379, 380, 471
PspOMI GGGCCC 1 cut(s) 378
PspPI GGNCC 3 cut(s) 378, 379, 430
PstI CTGCAG 1 cut(s) 832
PsuI RGATCY 1 cut(s) 469
PsyI GACNNNGTC 1 cut(s) 809
PvuI CGATCG 1 cut(s) 1128
RsaI GTAC 4 cut(s) 130, 365, 582, 865
RsaNI GTAC 4 cut(s) 129, 364, 581, 864
RseI CAYNNNNRTG 1 cut(s) 136
SaqAI TTAA 5 cut(s) 69, 212, 285, 965, 1032
SatI GCNGC 3 cut(s) 550, 605, 824
Sau3AI GATC 6 cut(s) 241, 245, 469, 685, 730, 1125
Sau96I GGNCC 3 cut(s) 378, 379, 430
SbfI CCTGCAGG 1 cut(s) 832
SchI GAGTC 3 cut(s) 332, 341, 872
ScrFI CCNGG 1 cut(s) 336
SdaI CCTGCAGG 1 cut(s) 832
SduI GDGCHC 3 cut(s) 336, 382, 622
SfaNI GCATC 2 cut(s) 128, 292
SfcI CTRYAG 1 cut(s) 828
SinI GGWCC 1 cut(s) 430
SmiMI CAYNNNNRTG 1 cut(s) 136
SmlI CTYRAG 1 cut(s) 880
SmoI CTYRAG 1 cut(s) 880
Sse8387I CCTGCAGG 1 cut(s) 832
Sse9I AATT 9 cut(s) 208, 213, 372, 396, 711, 725, 869, 1008, 1098
SseBI AGGCCT 1 cut(s) 755
SsiI CCGC 4 cut(s) 59, 361, 549, 623
SspI AATATT 1 cut(s) 737
SspMI CTAG 4 cut(s) 11, 795, 938, 1065
StuI AGGCCT 1 cut(s) 755
StyD4I CCNGG 1 cut(s) 334
TaaI ACNGT 3 cut(s) 481, 580, 1154
TaiI ACGT 2 cut(s) 586, 1111
TaqI TCGA 4 cut(s) 197, 244, 393, 1128
TasI AATT 9 cut(s) 208, 213, 372, 396, 711, 725, 869, 1008, 1098
TauI GCSGC 1 cut(s) 552
TfiI GAWTC 1 cut(s) 492
Tru1I TTAA 5 cut(s) 69, 212, 285, 965, 1032
Tru9I TTAA 5 cut(s) 69, 212, 285, 965, 1032
TscAI CASTG 4 cut(s) 255, 267, 722, 792
TseFI GTSAC 2 cut(s) 48, 811
TseI GCWGC 2 cut(s) 604, 823
Tsp45I GTSAC 2 cut(s) 48, 811
TspDTI ATGAA 3 cut(s) 65, 540, 641
TspGWI ACGGA 2 cut(s) 55, 116
TspRI CASTG 4 cut(s) 255, 267, 722, 792
Tth111I GACNNNGTC 1 cut(s) 809
VneI GTGCAC 1 cut(s) 618
VpaK11BI GGWCC 1 cut(s) 430
XapI RAATTY 3 cut(s) 208, 1008, 1098
XbaI TCTAGA 1 cut(s) 794
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 4 cut(s) 11, 795, 938, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.