MD05G1066100.v1.1

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0006913
Physical Location & Seq
Forward (+)
12380936 .. 12382057
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1066100.v1.1.491

Sequence Viewer

Length: 1122 bp
ATGAGTTATGAGAAAAATGAGAGCCCTAATTACATAACCAACCATGGAACCAAGGAAGCACATGAGTCAAAAGAAGTTGAGACTCCTTATGTAATGGGTTATGGAACTAAAAAAGGCGGGAAAGAAGTTGAGACTCCCTATGTAATGAGTTATGAGAAAAATCAGAGGCCTAATTACATAACCAACTATGGAGCCAAGGAAGCACATGAGTCAAAAGAAGTTGATGCGCCTTACATACTTGGATACATTTCTGCACGAGACACAAAGGAGCCAAAAGAAGTTGAAGCACCTTACATAACTGGGTACATTTCTGCACAAGGCACAAAAGTGCCGAAAGAAGTTGAAGCGCCATATATAACTGCGTACATTTCTACACACAGCGCAAAAGAAAAGGTCGGGACCAAGTGTAAACATCATAAGCATGTTAATCCACCTTCATTTGACACCAAACACTCACAAGAGCCAACATCAAAGGGCCACGAACACCATCATATGCATACACATTCATCGTCTCCAATGGATCACAATGAGGCATCCTGGCAAGGATTTTTCACATTTGATGATTTACACAAAGGTATGATAATGCCACTCAACTTTCCCAACCAAGAACATTCTCCTTTCTTACCTAAAGATGTAGCAGATTCCATTCCTTTCTCGACACCACAACTCCCACAGCTTCTTCAACTCTTGTCAATCCCACAAGGTTCTCGAGACGCAAACAACATGGCATATGCACTCGAACAATGTGAGATGAAACCCATCAATGGGGAGACCAAATTATGTGCCACTTCTCTTGAGTCAATGACAGATTTTGTTACCAAGATCATTGGTGCTGGAGTTCGCTTCAACATTCTCTCAACCACACACCCCATAACATCAACATCCATCACACAAAACTATATTTTGAAAGAGCCTAAAGAAGTTTTGGCTTCGAAAATGGTTTTTTGCCATCCGTTGGCTTATCCTTATGCAGTTTTCTTTTGCCATCATTTTGAGAAAGACACCAAGTTCTTCAAGGTTCGACTCAGAGGTGAGAATGGGGATAAGGTGGAAGCTATGGCTGTATGCCCGATGGACACTTCTGATTGGGTCCCTAACCACAATATATTTGGCCCGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

374

Amino Acids

42.1

Weight (kDa)

6.34

Isoelectric Point (pI)

33.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 183 - 371 3.5e-58 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 955
AciI CCGC 2 cut(s) 117, 1115
AclWI GGATC 1 cut(s) 528
AfaI GTAC 2 cut(s) 305, 365
AfiI CCNNNNNNNGG 3 cut(s) 764, 765, 955
AgsI TTSAA 6 cut(s) 284, 344, 683, 847, 907, 1015
AjnI CCWGG 1 cut(s) 536
AleI CACNNNNGTG 1 cut(s) 326
AluBI AGCT 2 cut(s) 676, 1055
AluI AGCT 2 cut(s) 676, 1055
Alw26I GTCTC 6 cut(s) 74, 125, 252, 516, 705, 764
AlwI GGATC 1 cut(s) 528
Ama87I CYCGRG 1 cut(s) 708
AoxI GGCC 3 cut(s) 167, 475, 1111
AspLEI GCGC 3 cut(s) 229, 349, 383
AspS9I GGNCC 4 cut(s) 399, 475, 1090, 1112
AsuHPI GGTGA 1 cut(s) 1043
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 708
AvaII GGWCC 2 cut(s) 399, 1090
BanII GRGCYC 1 cut(s) 26
BauI CACGAG 1 cut(s) 255
BccI CCATC 6 cut(s) 495, 767, 893, 957, 993, 1066
BciT130I CCWGG 1 cut(s) 538
BciVI GTATCC 1 cut(s) 236
BcoDI GTCTC 6 cut(s) 74, 125, 252, 516, 705, 764
BfoI RGCGCY 1 cut(s) 350
BfuI GTATCC 1 cut(s) 236
Bme1390I CCNGG 1 cut(s) 538
Bme18I GGWCC 2 cut(s) 399, 1090
BmeT110I CYCGRG 1 cut(s) 708
BmgT120I GGNCC 4 cut(s) 399, 475, 1090, 1112
BmiI GGNNCC 6 cut(s) 49, 193, 270, 400, 1091, 1092
BmrFI CCNGG 1 cut(s) 538
BmrI ACTGGG 1 cut(s) 309
BmsI GCATC 2 cut(s) 214, 542
BmuI ACTGGG 1 cut(s) 309
BpmI CTGGAG 1 cut(s) 855
Bpu14I TTCGAA 1 cut(s) 932
BpuEI CTTGAG 1 cut(s) 815
BsaI GGTCTC 1 cut(s) 764
BsaJI CCNNGG 3 cut(s) 43, 51, 195
BsaXI ACNNNNNCTCC 2 cut(s) 651, 681
Bsc4I CCNNNNNNNGG 3 cut(s) 764, 765, 955
Bse1I ACTGG 1 cut(s) 304
BseBI CCWGG 1 cut(s) 538
BseDI CCNNGG 3 cut(s) 43, 51, 195
BseGI GGATG 3 cut(s) 533, 881, 949
BseLI CCNNNNNNNGG 3 cut(s) 764, 765, 955
BseMII CTCAG 1 cut(s) 1039
BseNI ACTGG 1 cut(s) 304
BsgI GTGCAG 2 cut(s) 237, 297
BshFI GGCC 3 cut(s) 169, 477, 1113
BsiHKCI CYCGRG 1 cut(s) 708
BslFI GGGAC 2 cut(s) 412, 1076
BslI CCNNNNNNNGG 3 cut(s) 764, 765, 955
BsmAI GTCTC 6 cut(s) 74, 125, 252, 516, 705, 764
BsmBI CGTCTC 2 cut(s) 516, 705
BsmFI GGGAC 2 cut(s) 412, 1076
BsnI GGCC 3 cut(s) 169, 477, 1113
Bso31I GGTCTC 1 cut(s) 764
BsoBI CYCGRG 1 cut(s) 708
Bsp119I TTCGAA 1 cut(s) 932
Bsp1286I GDGCHC 1 cut(s) 26
Bsp143I GATC 2 cut(s) 520, 822
Bsp19I CCATGG 1 cut(s) 43
BspACI CCGC 2 cut(s) 117, 1115
BspANI GGCC 3 cut(s) 169, 477, 1113
BspCNI CTCAG 1 cut(s) 1038
BspLI GGNNCC 6 cut(s) 49, 193, 270, 400, 1091, 1092
BspPI GGATC 1 cut(s) 528
BspT104I TTCGAA 1 cut(s) 932
BspTNI GGTCTC 1 cut(s) 764
BsrI ACTGG 1 cut(s) 304
BssECI CCNNGG 3 cut(s) 43, 51, 195
BssMI GATC 2 cut(s) 520, 822
BssSI CACGAG 1 cut(s) 255
BssT1I CCWWGG 3 cut(s) 43, 51, 195
Bst2BI CACGAG 1 cut(s) 255
Bst2UI CCWGG 1 cut(s) 538
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 1 cut(s) 1115
BstDEI CTNAG 1 cut(s) 1025
BstDSI CCRYGG 1 cut(s) 43
BstF5I GGATG 3 cut(s) 533, 881, 949
BstH2I RGCGCY 1 cut(s) 350
BstHHI GCGC 3 cut(s) 229, 349, 383
BstKTI GATC 2 cut(s) 523, 825
BstMAI GTCTC 6 cut(s) 74, 125, 252, 516, 705, 764
BstMBI GATC 2 cut(s) 520, 822
BstMWI GCNNNNNNNGC 1 cut(s) 200
BstNI CCWGG 1 cut(s) 538
BstNSI RCATGY 1 cut(s) 425
BstSCI CCNGG 1 cut(s) 536
BsuI GTATCC 1 cut(s) 236
BsuRI GGCC 3 cut(s) 169, 477, 1113
BtgI CCRYGG 1 cut(s) 43
BtsCI GGATG 3 cut(s) 533, 881, 949
Cac8I GCNNGC 1 cut(s) 1115
CfoI GCGC 3 cut(s) 229, 349, 383
Cfr13I GGNCC 4 cut(s) 399, 475, 1090, 1112
CseI GACGC 1 cut(s) 722
Csp6I GTAC 2 cut(s) 304, 364
CspCI CAANNNNNGTGG 2 cut(s) 775, 810
CviAII CATG 5 cut(s) 44, 62, 206, 422, 724
CviQI GTAC 2 cut(s) 304, 364
DdeI CTNAG 1 cut(s) 1025
DpnI GATC 2 cut(s) 522, 824
DpnII GATC 2 cut(s) 520, 822
Eco130I CCWWGG 3 cut(s) 43, 51, 195
Eco147I AGGCCT 1 cut(s) 169
Eco24I GRGCYC 1 cut(s) 26
Eco31I GGTCTC 1 cut(s) 764
Eco47I GGWCC 2 cut(s) 399, 1090
Eco88I CYCGRG 1 cut(s) 708
EcoO109I RGGNCCY 1 cut(s) 1090
EcoRII CCWGG 1 cut(s) 536
EcoT14I CCWWGG 3 cut(s) 43, 51, 195
EcoT22I ATGCAT 1 cut(s) 498
EcoT38I GRGCYC 1 cut(s) 26
ErhI CCWWGG 3 cut(s) 43, 51, 195
Esp3I CGTCTC 2 cut(s) 516, 705
FaeI CATG 5 cut(s) 47, 65, 209, 425, 727
FaqI GGGAC 2 cut(s) 412, 1076
FatI CATG 5 cut(s) 43, 61, 205, 421, 723
FauI CCCGC 1 cut(s) 110
FauNDI CATATG 2 cut(s) 492, 730
FokI GGATG 3 cut(s) 520, 868, 936
FriOI GRGCYC 1 cut(s) 26
GlaI GCGC 3 cut(s) 228, 348, 382
GsuI CTGGAG 1 cut(s) 855
HaeII RGCGCY 1 cut(s) 350
HaeIII GGCC 3 cut(s) 169, 477, 1113
HgaI GACGC 1 cut(s) 722
HhaI GCGC 3 cut(s) 229, 349, 383
Hin1II CATG 5 cut(s) 47, 65, 209, 425, 727
Hin6I GCGC 3 cut(s) 227, 347, 381
HinP1I GCGC 3 cut(s) 227, 347, 381
HinfI GANTC 7 cut(s) 65, 82, 133, 209, 641, 797, 1023
HphI GGTGA 1 cut(s) 1043
Hpy166II GTNNAC 1 cut(s) 410
Hpy188I TCNGA 3 cut(s) 165, 1028, 1084
Hpy188III TCNNGA 5 cut(s) 397, 655, 708, 710, 794
Hpy8I GTNNAC 1 cut(s) 410
HpyAV CCTTC 1 cut(s) 444
HpyCH4V TGCA 5 cut(s) 254, 314, 496, 734, 971
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 1025
Hsp92II CATG 5 cut(s) 47, 65, 209, 425, 727
HspAI GCGC 3 cut(s) 227, 347, 381
KflI GGGWCCC 1 cut(s) 1090
Kzo9I GATC 2 cut(s) 520, 822
LmnI GCTCC 2 cut(s) 191, 268
LpnPI CCDG 4 cut(s) 285, 523, 550, 819
LweI GCATC 2 cut(s) 214, 542
MaeIII GTNAC 1 cut(s) 814
MalI GATC 2 cut(s) 522, 824
MboI GATC 2 cut(s) 520, 822
MboII GAAGA 2 cut(s) 671, 1003
MhlI GDGCHC 1 cut(s) 26
MluCI AATT 3 cut(s) 28, 172, 776
MlyI GAGTC 6 cut(s) 74, 76, 127, 218, 806, 1017
MnlI CCTC 3 cut(s) 159, 523, 1022
Mph1103I ATGCAT 1 cut(s) 498
MseI TTAA 1 cut(s) 426
MslI CAYNNNNRTG 2 cut(s) 326, 420
MspA1I CMGCKG 1 cut(s) 1117
MspR9I CCNGG 1 cut(s) 538
MvaI CCWGG 1 cut(s) 538
MwoI GCNNNNNNNGC 1 cut(s) 200
NcoI CCATGG 1 cut(s) 43
NdeI CATATG 2 cut(s) 492, 730
NdeII GATC 2 cut(s) 520, 822
NlaIII CATG 5 cut(s) 47, 65, 209, 425, 727
NlaIV GGNNCC 6 cut(s) 49, 193, 270, 400, 1091, 1092
NsiI ATGCAT 1 cut(s) 498
NspI RCATGY 1 cut(s) 425
NspV TTCGAA 1 cut(s) 932
OliI CACNNNNGTG 1 cut(s) 326
PaeR7I CTCGAG 1 cut(s) 708
PceI AGGCCT 1 cut(s) 169
PfeI GAWTC 1 cut(s) 641
PflMI CCANNNNNTGG 1 cut(s) 955
PleI GAGTC 6 cut(s) 73, 76, 127, 217, 805, 1017
PpsI GAGTC 6 cut(s) 73, 76, 127, 217, 805, 1017
PpuMI RGGWCCY 1 cut(s) 1090
Psp5II RGGWCCY 1 cut(s) 1090
Psp6I CCWGG 1 cut(s) 536
PspGI CCWGG 1 cut(s) 536
PspN4I GGNNCC 6 cut(s) 49, 193, 270, 400, 1091, 1092
PspPI GGNCC 4 cut(s) 399, 475, 1090, 1112
PspPPI RGGWCCY 1 cut(s) 1090
RsaI GTAC 2 cut(s) 305, 365
RsaNI GTAC 2 cut(s) 304, 364
RseI CAYNNNNRTG 2 cut(s) 326, 420
SaqAI TTAA 1 cut(s) 426
Sau3AI GATC 2 cut(s) 520, 822
Sau96I GGNCC 4 cut(s) 399, 475, 1090, 1112
SchI GAGTC 6 cut(s) 74, 76, 127, 218, 806, 1017
ScrFI CCNGG 1 cut(s) 538
SduI GDGCHC 1 cut(s) 26
SfaNI GCATC 2 cut(s) 214, 542
Sfr274I CTCGAG 1 cut(s) 708
SfuI TTCGAA 1 cut(s) 932
SinI GGWCC 2 cut(s) 399, 1090
SlaI CTCGAG 1 cut(s) 708
SmiMI CAYNNNNRTG 2 cut(s) 326, 420
SmlI CTYRAG 2 cut(s) 708, 794
SmoI CTYRAG 2 cut(s) 708, 794
Sse9I AATT 3 cut(s) 28, 172, 776
SseBI AGGCCT 1 cut(s) 169
SsiI CCGC 2 cut(s) 117, 1115
StuI AGGCCT 1 cut(s) 169
StyD4I CCNGG 1 cut(s) 536
StyI CCWWGG 3 cut(s) 43, 51, 195
TaqI TCGA 5 cut(s) 656, 709, 738, 932, 1021
TasI AATT 3 cut(s) 28, 172, 776
TfiI GAWTC 1 cut(s) 641
Tru1I TTAA 1 cut(s) 426
Tru9I TTAA 1 cut(s) 426
TspDTI ATGAA 3 cut(s) 426, 495, 767
TspGWI ACGGA 1 cut(s) 942
Van91I CCANNNNNTGG 1 cut(s) 955
VpaK11BI GGWCC 2 cut(s) 399, 1090
XceI RCATGY 1 cut(s) 425
XcmI CCANNNNNNNNNTGG 1 cut(s) 1106
XhoI CTCGAG 1 cut(s) 708
Zsp2I ATGCAT 1 cut(s) 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.