RLG00000014309

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006913
Physical Location & Seq
Forward (+)
51116727 .. 51119324
2598 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014309

Sequence Viewer

Length: 1596 bp
ATGATCTTTATAGTGATTCATATTTCATGTCCTTATGCCAGTGGAGCATGGGACGTAAGCACAAAACAAGTGGAGATCAATAGCGAGCCCTACGTCACAAATTATGGAGCTAGGAAAATTGTCAAAGAGTTGGAGGTGAGTGAGCCTTATATGACCAATTATGGTGGCAGAAAAATTGTGAAAGAGGTGGAGATAAGTGTGCCTTACATGACCAACTATGGTCCTAGAGAAAGTGTGAAAGAAGTGGAGAAAAGCGAGCCATACATGACCAATTATGGAGCTAGAAAAATTGTGAAAGAAGTGGAGGTAAGCGGGCCATACATGACCAACTACGGAGCTAGAGAAAGTGTGGAAGCAGTGGAGGTAAGAGAGCCTTACATGACCAACTATGGAGTAAGAGAAAGTGCAGTGGAGGAAAGGGAGCCTTACATGACCAACTATGGAGCTAGAAAAAGTGTGAAAGAAGTGGAGGTAAGAGAGCCTTACATGACCAACTATGGAGCTACAGAAAGTGTGAAAGCTGAGAAACCTTACATGACGAACTATGGAGCTAGAAAAAGTGTGAAAGAAGTGAAGGCAAGAGAGCCTTACATGACCAACTATGGAGCTACAGTAAGTGTGAAAGAAGCTGAGGAGGCTTACATGACCAATTATGGAAATACAGAGGCTTCTTACATTACCCAATATGGAAACAAAGAAGACATAAAAGAAACAGAGGCTACTTACATAACCCAGTACGGAGACAAAGAAGCTGAGGCTACTTACATAAATCAGTACGGAGACAAAGAAACTGAGGCTTCTTACATAACCCAGTATGGCACACAAGGAGGAGAAAACAAAATACAGAAGCCAGTTCCATCCGCCCATGAGCACCATGATCATATGCATGCACATTCATCATCTCGCAATGAGGCACACGAGCAAGGCTTTTTCACTTTGGTTGATTTCCATAAGGGGAGTACAATGCCTCTCAACTTCCCAAACCAAGACCATTCTCCTTTCTTGCCTAAGAAAACAGCTGATTCCCTTCCATTCTCAACATCACAACTCCCACACCTTCTCCAACTCTTCTCGATCCCACGCGATTCTCGTGACGCCAAACACATGGCGTACACACTTGATCAATGCGAGCAAAAACCCATCAAGGGTGAGACCAAGTTTTGTGCTACTTCGCTAGAGTCAATGAATGATTTCGTTCACAAAATCATTGGTTCTGGGATCAAATTCAATATTCTCTCCACGACCCACCCCTCAACCTCAACCTCCATTACACAGAAGTACACGATTCTGGAAGAACCTAAACAAGTCATAGCTTCCAAAATGGTCTTTTGCCATCCGGTCCCTTATCCTTACGCTGTTTTCTTTTGCCACCACTTTGAGAGCGACACCAGGTTCTTCCAGGTCTCACTAGGAGGTGAGAATGGAGATAAGGTGGAAGCCGTAGCGGTTTGCCACATGGACACTTCTGATTGGAATTCTAAGCTCAGTCTGTTCCGCAACTTGGGTATCAAAGCTAGTGCCTCCTCTCCGGTGTGCCATTTCTTCCCGGAAAATCATCTTGTTTGGATTCCATTCCCAGCAACAGCTACTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

532

Amino Acids

60.1

Weight (kDa)

5.89

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 310 - 523 1.8e-72 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1083
AciI CCGC 4 cut(s) 312, 861, 1445, 1495
AclWI GGATC 2 cut(s) 1069, 1226
AcsI RAATTY 2 cut(s) 1223, 1474
AcyI GRCGYC 1 cut(s) 1095
AfaI GTAC 5 cut(s) 737, 776, 961, 1112, 1280
AfiI CCNNNNNNNGG 2 cut(s) 1145, 1501
AgsI TTSAA 1 cut(s) 1228
AjnI CCWGG 2 cut(s) 1388, 1398
Alw21I GWGCWC 1 cut(s) 873
Alw26I GTCTC 4 cut(s) 735, 774, 1145, 1408
AlwI GGATC 2 cut(s) 1069, 1226
AlwNI CAGNNNCTG 1 cut(s) 1589
AoxI GGCC 1 cut(s) 314
ApoI RAATTY 2 cut(s) 1223, 1474
Asp700I GAANNNNTTC 1 cut(s) 1190
AspS9I GGNCC 3 cut(s) 221, 314, 1339
AsuC2I CCSGG 1 cut(s) 1547
AsuHPI GGTGA 3 cut(s) 148, 1160, 1427
AvaII GGWCC 2 cut(s) 221, 1339
BaeI ACNNNNGTAYC 2 cut(s) 1489, 1522
BanII GRGCYC 1 cut(s) 90
BauI CACGAG 2 cut(s) 917, 1089
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 1 cut(s) 873
BbvCI CCTCAGC 2 cut(s) 630, 753
BccI CCATC 3 cut(s) 865, 1148, 1341
BceAI ACGGC 1 cut(s) 1424
BciT130I CCWGG 2 cut(s) 1390, 1400
BclI TGATCA 2 cut(s) 877, 1120
BcnI CCSGG 1 cut(s) 1547
BcoDI GTCTC 4 cut(s) 735, 774, 1145, 1408
BfaI CTAG 9 cut(s) 111, 225, 282, 339, 447, 552, 1175, 1409, 1515
BfmI CTRYAG 2 cut(s) 504, 609
Bme1390I CCNGG 3 cut(s) 1390, 1400, 1547
Bme18I GGWCC 2 cut(s) 221, 1339
BmgT120I GGNCC 3 cut(s) 221, 314, 1339
BmiI GGNNCC 2 cut(s) 423, 1341
BmrFI CCNGG 3 cut(s) 1390, 1400, 1547
BmrI ACTGGG 2 cut(s) 727, 805
BmuI ACTGGG 2 cut(s) 727, 805
BpiI GAAGAC 1 cut(s) 705
Bpu10I CCTNAGC 2 cut(s) 630, 753
BpuMI CCSGG 1 cut(s) 1547
BsaHI GRCGYC 1 cut(s) 1095
BsaI GGTCTC 2 cut(s) 1145, 1408
BsaWI WCCGGW 2 cut(s) 1336, 1528
BsaXI ACNNNNNCTCC 6 cut(s) 597, 627, 1044, 1074, 1416, 1446
Bsc4I CCNNNNNNNGG 2 cut(s) 1145, 1501
Bse1I ACTGG 4 cut(s) 39, 733, 811, 851
Bse3DI GCAATG 1 cut(s) 913
BseBI CCWGG 2 cut(s) 1390, 1400
BseGI GGATG 2 cut(s) 857, 1333
BseLI CCNNNNNNNGG 2 cut(s) 1145, 1501
BseMI GCAATG 1 cut(s) 913
BseMII CTCAG 5 cut(s) 513, 621, 744, 783, 1498
BseNI ACTGG 4 cut(s) 39, 733, 811, 851
BseRI GAGGAG 3 cut(s) 647, 843, 1513
BseYI CCCAGC 1 cut(s) 1576
BsgI GTGCAG 1 cut(s) 426
Bsh1236I CGCG 1 cut(s) 1083
BshFI GGCC 1 cut(s) 316
BsiHKAI GWGCWC 1 cut(s) 873
BsiSI CCGG 3 cut(s) 1337, 1529, 1547
BslFI GGGAC 2 cut(s) 65, 1325
BslI CCNNNNNNNGG 2 cut(s) 1145, 1501
BsmAI GTCTC 4 cut(s) 735, 774, 1145, 1408
BsmFI GGGAC 2 cut(s) 65, 1325
BsnI GGCC 1 cut(s) 316
Bso31I GGTCTC 2 cut(s) 1145, 1408
Bsp1286I GDGCHC 2 cut(s) 90, 873
Bsp143I GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
BspACI CCGC 4 cut(s) 312, 861, 1445, 1495
BspANI GGCC 1 cut(s) 316
BspCNI CTCAG 5 cut(s) 514, 622, 745, 784, 1497
BspFNI CGCG 1 cut(s) 1083
BspLI GGNNCC 2 cut(s) 423, 1341
BspPI GGATC 2 cut(s) 1069, 1226
BspTNI GGTCTC 2 cut(s) 1145, 1408
BsrDI GCAATG 1 cut(s) 913
BsrI ACTGG 4 cut(s) 39, 733, 811, 851
BssMI GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
BssNI GRCGYC 1 cut(s) 1095
BssSI CACGAG 2 cut(s) 917, 1089
Bst2BI CACGAG 2 cut(s) 917, 1089
Bst2UI CCWGG 2 cut(s) 1390, 1400
Bst4CI ACNGT 1 cut(s) 613
Bst6I CTCTTC 1 cut(s) 1073
BstACI GRCGYC 1 cut(s) 1095
BstC8I GCNNGC 5 cut(s) 86, 257, 314, 888, 1130
BstDEI CTNAG 7 cut(s) 522, 630, 753, 792, 1008, 1479, 1484
BstF5I GGATG 2 cut(s) 857, 1333
BstFNI CGCG 1 cut(s) 1083
BstKTI GATC 6 cut(s) 6, 78, 880, 1077, 1123, 1221
BstMAI GTCTC 4 cut(s) 735, 774, 1145, 1408
BstMBI GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
BstMWI GCNNNNNNNGC 2 cut(s) 44, 635
BstNI CCWGG 2 cut(s) 1390, 1400
BstNSI RCATGY 1 cut(s) 890
BstSCI CCNGG 3 cut(s) 1388, 1398, 1545
BstSFI CTRYAG 2 cut(s) 504, 609
BstUI CGCG 1 cut(s) 1083
BstV2I GAAGAC 1 cut(s) 705
BstXI CCANNNNNNTGG 1 cut(s) 1105
BsuRI GGCC 1 cut(s) 316
BtsCI GGATG 2 cut(s) 857, 1333
BtsI GCAGTG 2 cut(s) 363, 414
BtsIMutI CAGTG 3 cut(s) 46, 363, 414
Cac8I GCNNGC 5 cut(s) 86, 257, 314, 888, 1130
CaiI CAGNNNCTG 1 cut(s) 1589
Cfr13I GGNCC 3 cut(s) 221, 314, 1339
CseI GACGC 1 cut(s) 1103
CsiI ACCWGGT 1 cut(s) 1388
Csp6I GTAC 5 cut(s) 736, 775, 960, 1111, 1279
CspCI CAANNNNNGTGG 4 cut(s) 51, 86, 145, 180
CviQI GTAC 5 cut(s) 736, 775, 960, 1111, 1279
DdeI CTNAG 7 cut(s) 522, 630, 753, 792, 1008, 1479, 1484
DpnI GATC 6 cut(s) 5, 77, 879, 1076, 1122, 1220
DpnII GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
Eam1104I CTCTTC 1 cut(s) 1073
EarI CTCTTC 1 cut(s) 1073
EciI GGCGGA 1 cut(s) 850
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 2 cut(s) 1145, 1408
Eco47I GGWCC 2 cut(s) 221, 1339
EcoRI GAATTC 1 cut(s) 1474
EcoRII CCWGG 2 cut(s) 1388, 1398
EcoT22I ATGCAT 1 cut(s) 888
EcoT38I GRGCYC 1 cut(s) 90
FaqI GGGAC 2 cut(s) 65, 1325
FauI CCCGC 1 cut(s) 305
FauNDI CATATG 1 cut(s) 882
FbaI TGATCA 2 cut(s) 877, 1120
FokI GGATG 2 cut(s) 844, 1320
FriOI GRGCYC 1 cut(s) 90
FspBI CTAG 9 cut(s) 111, 225, 282, 339, 447, 552, 1175, 1409, 1515
GsaI CCCAGC 1 cut(s) 1580
HaeIII GGCC 1 cut(s) 316
HapII CCGG 3 cut(s) 1337, 1529, 1547
HgaI GACGC 1 cut(s) 1103
Hin1I GRCGYC 1 cut(s) 1095
HinfI GANTC 6 cut(s) 16, 1022, 1085, 1178, 1285, 1567
HpaII CCGG 3 cut(s) 1337, 1529, 1547
HphI GGTGA 3 cut(s) 148, 1160, 1427
Hpy166II GTNNAC 3 cut(s) 1113, 1198, 1281
Hpy188I TCNGA 1 cut(s) 1468
Hpy188III TCNNGA 3 cut(s) 1072, 1091, 1289
Hpy8I GTNNAC 3 cut(s) 1113, 1198, 1281
HpyAV CCTTC 3 cut(s) 568, 1037, 1067
HpyCH4III ACNGT 1 cut(s) 613
HpyCH4IV ACGT 2 cut(s) 54, 93
HpyCH4V TGCA 3 cut(s) 407, 886, 890
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 635
HpyF3I CTNAG 7 cut(s) 522, 630, 753, 792, 1008, 1479, 1484
HpySE526I ACGT 2 cut(s) 54, 93
Hsp92I GRCGYC 1 cut(s) 1095
Ksp22I TGATCA 2 cut(s) 877, 1120
Kzo9I GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
LmnI GCTCC 9 cut(s) 44, 107, 278, 335, 421, 443, 500, 548, 605
MabI ACCWGGT 1 cut(s) 1388
MaeI CTAG 9 cut(s) 111, 225, 282, 339, 447, 552, 1175, 1409, 1515
MaeII ACGT 2 cut(s) 54, 93
MaeIII GTNAC 2 cut(s) 94, 1091
MalI GATC 6 cut(s) 5, 77, 879, 1076, 1122, 1220
MboI GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
MboII GAAGA 5 cut(s) 710, 1060, 1304, 1387, 1534
MhlI GDGCHC 2 cut(s) 90, 873
MluCI AATT 9 cut(s) 100, 117, 157, 174, 271, 288, 649, 1223, 1474
MlyI GAGTC 1 cut(s) 1187
MmeI TCCRAC 2 cut(s) 111, 1087
Mph1103I ATGCAT 1 cut(s) 888
MroXI GAANNNNTTC 1 cut(s) 1190
MslI CAYNNNNRTG 1 cut(s) 885
MspA1I CMGCKG 1 cut(s) 1019
MspI CCGG 3 cut(s) 1337, 1529, 1547
MspR9I CCNGG 3 cut(s) 1390, 1400, 1547
MvaI CCWGG 2 cut(s) 1390, 1400
MvnI CGCG 1 cut(s) 1083
MwoI GCNNNNNNNGC 2 cut(s) 44, 635
NciI CCSGG 1 cut(s) 1547
NdeI CATATG 1 cut(s) 882
NdeII GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
NlaIV GGNNCC 2 cut(s) 423, 1341
NmuCI GTSAC 2 cut(s) 94, 1091
NsiI ATGCAT 1 cut(s) 888
NspI RCATGY 1 cut(s) 890
PaeI GCATGC 1 cut(s) 890
PcsI WCGNNNNNNNCGW 1 cut(s) 1087
PdmI GAANNNNTTC 1 cut(s) 1190
PfeI GAWTC 5 cut(s) 16, 1022, 1085, 1285, 1567
PfoI TCCNGGA 1 cut(s) 1545
PleI GAGTC 1 cut(s) 1186
PpsI GAGTC 1 cut(s) 1186
Psp6I CCWGG 2 cut(s) 1388, 1398
PspFI CCCAGC 1 cut(s) 1576
PspGI CCWGG 2 cut(s) 1388, 1398
PspN4I GGNNCC 2 cut(s) 423, 1341
PspPI GGNCC 3 cut(s) 221, 314, 1339
PstNI CAGNNNCTG 1 cut(s) 1589
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 5 cut(s) 737, 776, 961, 1112, 1280
RsaNI GTAC 5 cut(s) 736, 775, 960, 1111, 1279
RseI CAYNNNNRTG 1 cut(s) 885
Sau3AI GATC 6 cut(s) 3, 75, 877, 1074, 1120, 1218
Sau96I GGNCC 3 cut(s) 221, 314, 1339
SchI GAGTC 1 cut(s) 1187
ScrFI CCNGG 3 cut(s) 1390, 1400, 1547
SduI GDGCHC 2 cut(s) 90, 873
SexAI ACCWGGT 1 cut(s) 1388
SfcI CTRYAG 2 cut(s) 504, 609
SinI GGWCC 2 cut(s) 221, 1339
SmiMI CAYNNNNRTG 1 cut(s) 885
SphI GCATGC 1 cut(s) 890
Sse9I AATT 9 cut(s) 100, 117, 157, 174, 271, 288, 649, 1223, 1474
SsiI CCGC 4 cut(s) 312, 861, 1445, 1495
SspI AATATT 1 cut(s) 1231
SspMI CTAG 9 cut(s) 111, 225, 282, 339, 447, 552, 1175, 1409, 1515
StyD4I CCNGG 3 cut(s) 1388, 1398, 1545
TaaI ACNGT 1 cut(s) 613
TaiI ACGT 2 cut(s) 57, 96
TaqI TCGA 1 cut(s) 1073
TasI AATT 9 cut(s) 100, 117, 157, 174, 271, 288, 649, 1223, 1474
TatI WGTACW 2 cut(s) 959, 1278
TfiI GAWTC 5 cut(s) 16, 1022, 1085, 1285, 1567
TscAI CASTG 3 cut(s) 46, 363, 414
TseFI GTSAC 2 cut(s) 94, 1091
Tsp45I GTSAC 2 cut(s) 94, 1091
TspDTI ATGAA 4 cut(s) 8, 15, 885, 1199
TspGWI ACGGA 3 cut(s) 348, 753, 792
TspRI CASTG 3 cut(s) 46, 363, 414
VpaK11BI GGWCC 2 cut(s) 221, 1339
XapI RAATTY 2 cut(s) 1223, 1474
XceI RCATGY 1 cut(s) 890
XmnI GAANNNNTTC 1 cut(s) 1190
XspI CTAG 9 cut(s) 111, 225, 282, 339, 447, 552, 1175, 1409, 1515
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.