Rh6AG126000

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006913
Physical Location & Seq
Reverse (-)
18880621 .. 18883131
2511 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG126000.1

Sequence Viewer

Length: 1737 bp
ATGGGCGTTCGATTCATCATCAGCTTCTACCTTCTGTTAGTAGTGTGTCGTGAGGCCAATGGAGCAAGGAATGTACTCAAGCAGGAGCCAAAAGAAGAAGATGCACCATACATTACTAGTTATGGAATCGAAGAAGGCATAAAAGAGGTCGAAGCTCCTTACATAACTCAGTATGGTACAAAAGAAGGCAAAGTGGAAGAGGTCGAAGCTCCTTACATAACTCAGTATGGTACAGAAGAAGACAAAGTGGAAGTGGTCGAAGCTCCTTACATAACCGGGTACATTTCTGCGGAAGGCAACACCAAGGAAGTAGAGACGCCATACATAACAGGATATATTTCCGCACAAGACACGAAGGGCACAAAGGAAGTGGAGGCGCCTTACATCACTGGATACATTTCCAAACGAGACACAAAGAGCACAAAAGATGTAGAGGCACCTTACATAACACAATATCAAAACAAAGAGGCTTCCTACAATACCCAGTATGGAACGAAAGAAGGAAAGAATAAGGTAGAGGAGCCTTACCTAACTGGTTACAAGACCACAAGGGAGTCGAAAGAGGTAGAAGCGCCTTACGTAACAGGGTACATTTCCGCACAAGGCACAAAGCTCAAGAAGGAGGTAGAGGCGCCTTACATAACCGGATACATTTCCACACAAGGCAGCAAGCTCAAGAAAGAGGTAGAGGCACCTTACATAACCGGATACATTTCTGCACAAGGCACAAATGGCAAGGAGGTAGAGGCGCCTTACATAACTGGATACATTTCCGCACAAGGCACAAAGCTCAAGAAGGAGGTAGAGGCGCCTTACATCACCGGATACATTTCCGCACAAGGCACAAAGGGCAAGAAGGAAGTAGAGGCGCCTTATATAACCGGATATATTTCTGCACAAGGCGCGAAAAACTGCGAACATCAGAAGCATGTACATCCACCTTCCCAAAATGGAGCAAAGGATGTGGTTTCGGGTAAGGAATTACCTATGGAACATCAACATCATGATCATATGCATGCACATTCATCATCCTCCCTGGATCATACTGAGGCACTCAAGCAAGGATTTTTTACTTTTGAGGATTTCTACAAAGGGAATGCACTGCCACTCAACTTCCCCAAACAAGACCATTCTCGTTTCTTGCCTAAAGCAACAGCCGATTCCATTCCATTTTCAACATCACAGCTCCCACACCTTCTCCAACTCTTCTCAACCCCACGCGACTCTCGTGACGCAAAACACATGGCCTGGACACTCGACCAGTGCGAACTGAAACCCATTAAGGGGGAGACGAAGTTCTGTGCTACTTCTCTAGAATCCATGATAGATTTTGTTCAAAAAATCATTGGTTCAGGGGTCAACTTCAATATTCTCTCTACCACCCACCCAGAAACCTCAACTGCCATCACACAAAAGTACACTATCTTGGACGAGCCCAAACAAGTCTTAGCTTCCAAAATGGTCTTTTGCCACCCGGTCCCTTATCCTTATGCTGTTTTCTTCTGCCACCACTTTGAGAACGATACCAAGTTCTTCAAGGTTTCACTGGGAGGCGAGAACGGAGATAAGGTGGAAGCCGTAGCTGTTTGCCACATGGACACTTCTGATTGGGACCCTAACCACAGTTTGTTTCGCTTATTGGGAATCAAGGCTGGTGCTTCTTCACCAGTGTGCCATTTCTTCCCTGGAAATCATCTAGTTTGGATTCCATCATCACCAACAACAGCTACCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

578

Amino Acids

64.37

Weight (kDa)

5.93

Isoelectric Point (pI)

25.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 356 - 569 1.1e-74 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 7 cut(s) 376, 436, 631, 691, 748, 808, 868
AccII CGCG 2 cut(s) 905, 1221
AciI CCGC 5 cut(s) 290, 342, 597, 774, 834
AclWI GGATC 1 cut(s) 1047
AcyI GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
AfaI GTAC 7 cut(s) 75, 178, 232, 281, 590, 933, 1418
AfiI CCNNNNNNNGG 2 cut(s) 1283, 1284
AgsI TTSAA 4 cut(s) 1176, 1337, 1366, 1537
AhlI ACTAGT 1 cut(s) 116
AjnI CCWGG 3 cut(s) 1035, 1247, 1684
AleI CACNNNNGTG 1 cut(s) 1669
AloI GAACNNNNNNTCC 2 cut(s) 1280, 1312
Alw21I GWGCWC 1 cut(s) 422
Alw26I GTCTC 3 cut(s) 308, 402, 1283
AlwI GGATC 1 cut(s) 1047
AoxI GGCC 2 cut(s) 54, 1245
ApeKI GCWGC 1 cut(s) 666
AspLEI GCGC 7 cut(s) 379, 574, 634, 751, 811, 871, 905
AspS9I GGNCC 2 cut(s) 1477, 1612
AsuC2I CCSGG 2 cut(s) 277, 1475
AsuHPI GGTGA 3 cut(s) 811, 1656, 1707
AvaII GGWCC 2 cut(s) 1477, 1612
BaeGI GKGCMC 1 cut(s) 362
BanI GGYRCC 7 cut(s) 376, 436, 631, 691, 748, 808, 868
BanII GRGCYC 1 cut(s) 1437
BauI CACGAG 1 cut(s) 1227
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 422
BbvI GCAGC 1 cut(s) 678
BccI CCATC 2 cut(s) 1412, 1717
BceAI ACGGC 1 cut(s) 1562
BciT130I CCWGG 3 cut(s) 1037, 1249, 1686
BciVI GTATCC 5 cut(s) 386, 641, 701, 758, 818
BclI TGATCA 1 cut(s) 1006
BcnI CCSGG 2 cut(s) 277, 1475
BcoDI GTCTC 3 cut(s) 308, 402, 1283
BcuI ACTAGT 1 cut(s) 116
BfaI CTAG 3 cut(s) 117, 1313, 1697
BfoI RGCGCY 6 cut(s) 380, 575, 635, 752, 812, 872
BfuI GTATCC 5 cut(s) 386, 641, 701, 758, 818
BisI GCNGC 1 cut(s) 667
BlsI GCNGC 1 cut(s) 668
Bme1390I CCNGG 5 cut(s) 277, 1037, 1249, 1475, 1686
Bme18I GGWCC 2 cut(s) 1477, 1612
BmgT120I GGNCC 2 cut(s) 1477, 1612
BmrFI CCNGG 5 cut(s) 277, 1037, 1249, 1475, 1686
BmrI ACTGGG 2 cut(s) 478, 1556
BmsI GCATC 1 cut(s) 91
BmuI ACTGGG 2 cut(s) 478, 1556
BpiI GAAGAC 1 cut(s) 246
BpuEI CTTGAG 5 cut(s) 62, 599, 659, 776, 1040
BpuMI CCSGG 2 cut(s) 277, 1475
BsaAI YACGTR 1 cut(s) 580
BsaHI GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
BsaJI CCNNGG 3 cut(s) 303, 1035, 1684
BsaWI WCCGGW 4 cut(s) 644, 704, 821, 881
BsaXI ACNNNNNCTCC 6 cut(s) 1182, 1212, 1280, 1310, 1554, 1584
Bsc4I CCNNNNNNNGG 2 cut(s) 1283, 1284
Bse1I ACTGG 7 cut(s) 394, 484, 538, 766, 1261, 1551, 1667
BseBI CCWGG 3 cut(s) 1037, 1249, 1686
BseDI CCNNGG 3 cut(s) 303, 1035, 1684
BseGI GGATG 3 cut(s) 934, 967, 1028
BseLI CCNNNNNNNGG 2 cut(s) 1283, 1284
BseMII CTCAG 3 cut(s) 182, 236, 1038
BseNI ACTGG 7 cut(s) 394, 484, 538, 766, 1261, 1551, 1667
BseRI GAGGAG 1 cut(s) 533
BseSI GKGCMC 1 cut(s) 362
BseXI GCAGC 1 cut(s) 678
BsgI GTGCAG 2 cut(s) 702, 879
Bsh1236I CGCG 2 cut(s) 905, 1221
BshFI GGCC 2 cut(s) 56, 1247
BshNI GGYRCC 7 cut(s) 376, 436, 631, 691, 748, 808, 868
BsiHKAI GWGCWC 1 cut(s) 422
BsiSI CCGG 6 cut(s) 276, 645, 705, 822, 882, 1475
BslFI GGGAC 2 cut(s) 1463, 1625
BslI CCNNNNNNNGG 2 cut(s) 1283, 1284
BsmAI GTCTC 3 cut(s) 308, 402, 1283
BsmBI CGTCTC 2 cut(s) 308, 1283
BsmFI GGGAC 2 cut(s) 1463, 1625
BsmI GAATGC 1 cut(s) 1102
BsnI GGCC 2 cut(s) 56, 1247
Bsp1286I GDGCHC 3 cut(s) 362, 422, 1437
Bsp1407I TGTACA 1 cut(s) 931
Bsp143I GATC 2 cut(s) 1006, 1039
BspACI CCGC 5 cut(s) 290, 342, 597, 774, 834
BspANI GGCC 2 cut(s) 56, 1247
BspCNI CTCAG 3 cut(s) 181, 235, 1039
BspFNI CGCG 2 cut(s) 905, 1221
BspHI TCATGA 1 cut(s) 1003
BspPI GGATC 1 cut(s) 1047
BspT107I GGYRCC 7 cut(s) 376, 436, 631, 691, 748, 808, 868
BsrGI TGTACA 1 cut(s) 931
BsrI ACTGG 7 cut(s) 394, 484, 538, 766, 1261, 1551, 1667
BssECI CCNNGG 3 cut(s) 303, 1035, 1684
BssMI GATC 2 cut(s) 1006, 1039
BssNI GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
BssSI CACGAG 1 cut(s) 1227
BssT1I CCWWGG 1 cut(s) 303
Bst2BI CACGAG 1 cut(s) 1227
Bst2UI CCWGG 3 cut(s) 1037, 1249, 1686
Bst4CI ACNGT 1 cut(s) 1625
Bst6I CTCTTC 2 cut(s) 192, 1211
BstACI GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
BstAUI TGTACA 1 cut(s) 931
BstBAI YACGTR 1 cut(s) 580
BstC8I GCNNGC 2 cut(s) 671, 1017
BstDEI CTNAG 4 cut(s) 168, 222, 1047, 1447
BstF5I GGATG 3 cut(s) 934, 967, 1028
BstFNI CGCG 2 cut(s) 905, 1221
BstH2I RGCGCY 6 cut(s) 380, 575, 635, 752, 812, 872
BstHHI GCGC 7 cut(s) 379, 574, 634, 751, 811, 871, 905
BstKTI GATC 2 cut(s) 1009, 1042
BstMAI GTCTC 3 cut(s) 308, 402, 1283
BstMBI GATC 2 cut(s) 1006, 1039
BstMWI GCNNNNNNNGC 4 cut(s) 62, 732, 849, 902
BstNI CCWGG 3 cut(s) 1037, 1249, 1686
BstNSI RCATGY 2 cut(s) 932, 1019
BstSCI CCNGG 5 cut(s) 275, 1035, 1247, 1473, 1684
BstSLI GKGCMC 1 cut(s) 362
BstSNI TACGTA 1 cut(s) 580
BstUI CGCG 2 cut(s) 905, 1221
BstV1I GCAGC 1 cut(s) 678
BstV2I GAAGAC 1 cut(s) 246
BsuI GTATCC 5 cut(s) 386, 641, 701, 758, 818
BsuRI GGCC 2 cut(s) 56, 1247
BtsCI GGATG 3 cut(s) 934, 967, 1028
BtsI GCAGTG 1 cut(s) 1100
BtsIMutI CAGTG 5 cut(s) 387, 1100, 1268, 1544, 1674
Cac8I GCNNGC 2 cut(s) 671, 1017
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 7 cut(s) 379, 574, 634, 751, 811, 871, 905
Cfr13I GGNCC 2 cut(s) 1477, 1612
CseI GACGC 2 cut(s) 325, 1241
Csp6I GTAC 7 cut(s) 74, 177, 231, 280, 589, 932, 1417
CspCI CAANNNNNGTGG 4 cut(s) 351, 386, 945, 980
CviAII CATG 6 cut(s) 929, 1004, 1016, 1243, 1321, 1594
CviQI GTAC 7 cut(s) 74, 177, 231, 280, 589, 932, 1417
DdeI CTNAG 4 cut(s) 168, 222, 1047, 1447
DinI GGCGCC 5 cut(s) 378, 633, 750, 810, 870
DpnI GATC 2 cut(s) 1008, 1041
DpnII GATC 2 cut(s) 1006, 1039
Eam1104I CTCTTC 2 cut(s) 192, 1211
EarI CTCTTC 2 cut(s) 192, 1211
Eco105I TACGTA 1 cut(s) 580
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 1 cut(s) 1437
Eco47I GGWCC 2 cut(s) 1477, 1612
EcoO109I RGGNCCY 1 cut(s) 1612
EcoRII CCWGG 3 cut(s) 1035, 1247, 1684
EcoT14I CCWWGG 1 cut(s) 303
EcoT22I ATGCAT 1 cut(s) 1017
EcoT38I GRGCYC 1 cut(s) 1437
EgeI GGCGCC 5 cut(s) 378, 633, 750, 810, 870
EheI GGCGCC 5 cut(s) 378, 633, 750, 810, 870
ErhI CCWWGG 1 cut(s) 303
Esp3I CGTCTC 2 cut(s) 308, 1283
FaeI CATG 6 cut(s) 932, 1007, 1019, 1246, 1324, 1597
FaqI GGGAC 2 cut(s) 1463, 1625
FatI CATG 6 cut(s) 928, 1003, 1015, 1242, 1320, 1593
FauNDI CATATG 1 cut(s) 1011
FbaI TGATCA 1 cut(s) 1006
Fnu4HI GCNGC 1 cut(s) 667
FokI GGATG 3 cut(s) 921, 974, 1015
FriOI GRGCYC 1 cut(s) 1437
Fsp4HI GCNGC 1 cut(s) 667
FspBI CTAG 3 cut(s) 117, 1313, 1697
GlaI GCGC 7 cut(s) 378, 573, 633, 750, 810, 870, 904
GluI GCNGC 1 cut(s) 667
HaeII RGCGCY 6 cut(s) 380, 575, 635, 752, 812, 872
HaeIII GGCC 2 cut(s) 56, 1247
HapII CCGG 6 cut(s) 276, 645, 705, 822, 882, 1475
HgaI GACGC 2 cut(s) 325, 1241
HhaI GCGC 7 cut(s) 379, 574, 634, 751, 811, 871, 905
Hin1I GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
Hin1II CATG 6 cut(s) 932, 1007, 1019, 1246, 1324, 1597
Hin6I GCGC 7 cut(s) 377, 572, 632, 749, 809, 869, 903
HinP1I GCGC 7 cut(s) 377, 572, 632, 749, 809, 869, 903
HincII GTYRAC 1 cut(s) 1360
HindII GTYRAC 1 cut(s) 1360
HinfI GANTC 8 cut(s) 12, 126, 554, 1160, 1223, 1316, 1644, 1705
HpaII CCGG 6 cut(s) 276, 645, 705, 822, 882, 1475
HphI GGTGA 3 cut(s) 811, 1656, 1707
Hpy166II GTNNAC 2 cut(s) 1360, 1419
Hpy188I TCNGA 2 cut(s) 924, 1606
Hpy188III TCNNGA 7 cut(s) 50, 616, 676, 793, 1004, 1229, 1313
Hpy8I GTNNAC 2 cut(s) 1360, 1419
HpyCH4III ACNGT 1 cut(s) 1625
HpyCH4IV ACGT 1 cut(s) 579
HpyCH4V TGCA 6 cut(s) 104, 719, 896, 1015, 1019, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 732, 849, 902
HpyF3I CTNAG 4 cut(s) 168, 222, 1047, 1447
HpySE526I ACGT 1 cut(s) 579
Hsp92I GRCGYC 6 cut(s) 317, 377, 632, 749, 809, 869
Hsp92II CATG 6 cut(s) 932, 1007, 1019, 1246, 1324, 1597
HspAI GCGC 7 cut(s) 377, 572, 632, 749, 809, 869, 903
KasI GGCGCC 5 cut(s) 376, 631, 748, 808, 868
KflI GGGWCCC 1 cut(s) 1612
Ksp22I TGATCA 1 cut(s) 1006
Kzo9I GATC 2 cut(s) 1006, 1039
LmnI GCTCC 8 cut(s) 62, 85, 160, 214, 268, 520, 953, 1191
Lsp1109I GCAGC 1 cut(s) 678
LweI GCATC 1 cut(s) 91
MaeI CTAG 3 cut(s) 117, 1313, 1697
MaeII ACGT 1 cut(s) 579
MaeIII GTNAC 3 cut(s) 536, 580, 1229
MalI GATC 2 cut(s) 1008, 1041
MboI GATC 2 cut(s) 1006, 1039
MhlI GDGCHC 3 cut(s) 362, 422, 1437
MluCI AATT 1 cut(s) 980
Mly113I GGCGCC 5 cut(s) 377, 632, 749, 809, 869
MlyI GAGTC 2 cut(s) 563, 1217
MmeI TCCRAC 1 cut(s) 1225
Mph1103I ATGCAT 1 cut(s) 1017
MseI TTAA 2 cut(s) 1281, 1735
MslI CAYNNNNRTG 2 cut(s) 1014, 1669
MspI CCGG 6 cut(s) 276, 645, 705, 822, 882, 1475
MspR9I CCNGG 5 cut(s) 277, 1037, 1249, 1475, 1686
Mva1269I GAATGC 1 cut(s) 1102
MvaI CCWGG 3 cut(s) 1037, 1249, 1686
MvnI CGCG 2 cut(s) 905, 1221
MwoI GCNNNNNNNGC 4 cut(s) 62, 732, 849, 902
NarI GGCGCC 5 cut(s) 377, 632, 749, 809, 869
NciI CCSGG 2 cut(s) 277, 1475
NdeI CATATG 1 cut(s) 1011
NdeII GATC 2 cut(s) 1006, 1039
NlaIII CATG 6 cut(s) 932, 1007, 1019, 1246, 1324, 1597
NmuCI GTSAC 1 cut(s) 1229
NsiI ATGCAT 1 cut(s) 1017
NspI RCATGY 2 cut(s) 932, 1019
OliI CACNNNNGTG 1 cut(s) 1669
PaeI GCATGC 1 cut(s) 1019
PagI TCATGA 1 cut(s) 1003
PcsI WCGNNNNNNNCGW 2 cut(s) 1225, 1263
PctI GAATGC 1 cut(s) 1102
PfeI GAWTC 6 cut(s) 12, 126, 1160, 1316, 1644, 1705
PkrI GCNGC 1 cut(s) 668
PleI GAGTC 2 cut(s) 562, 1217
PluTI GGCGCC 5 cut(s) 380, 635, 752, 812, 872
PpsI GAGTC 2 cut(s) 562, 1217
Ppu21I YACGTR 1 cut(s) 580
PpuMI RGGWCCY 1 cut(s) 1612
Psp5II RGGWCCY 1 cut(s) 1612
Psp6I CCWGG 3 cut(s) 1035, 1247, 1684
PspGI CCWGG 3 cut(s) 1035, 1247, 1684
PspPI GGNCC 2 cut(s) 1477, 1612
PspPPI RGGWCCY 1 cut(s) 1612
RsaI GTAC 7 cut(s) 75, 178, 232, 281, 590, 933, 1418
RsaNI GTAC 7 cut(s) 74, 177, 231, 280, 589, 932, 1417
RseI CAYNNNNRTG 2 cut(s) 1014, 1669
SaqAI TTAA 2 cut(s) 1281, 1735
SatI GCNGC 1 cut(s) 667
Sau3AI GATC 2 cut(s) 1006, 1039
Sau96I GGNCC 2 cut(s) 1477, 1612
SchI GAGTC 2 cut(s) 563, 1217
ScrFI CCNGG 5 cut(s) 277, 1037, 1249, 1475, 1686
SduI GDGCHC 3 cut(s) 362, 422, 1437
SfaNI GCATC 1 cut(s) 91
SfoI GGCGCC 5 cut(s) 378, 633, 750, 810, 870
SinI GGWCC 2 cut(s) 1477, 1612
SmiMI CAYNNNNRTG 2 cut(s) 1014, 1669
SmlI CTYRAG 5 cut(s) 77, 614, 674, 791, 1055
SmoI CTYRAG 5 cut(s) 77, 614, 674, 791, 1055
SnaBI TACGTA 1 cut(s) 580
SpeI ACTAGT 1 cut(s) 116
SphI GCATGC 1 cut(s) 1019
Sse9I AATT 1 cut(s) 980
SsiI CCGC 5 cut(s) 290, 342, 597, 774, 834
SspDI GGCGCC 5 cut(s) 376, 631, 748, 808, 868
SspI AATATT 1 cut(s) 1369
SspMI CTAG 3 cut(s) 117, 1313, 1697
StyD4I CCNGG 5 cut(s) 275, 1035, 1247, 1473, 1684
StyI CCWWGG 1 cut(s) 303
TaaI ACNGT 1 cut(s) 1625
TaiI ACGT 1 cut(s) 582
TaqI TCGA 7 cut(s) 10, 129, 150, 204, 258, 557, 1257
TasI AATT 1 cut(s) 980
TatI WGTACW 3 cut(s) 73, 931, 1416
TfiI GAWTC 6 cut(s) 12, 126, 1160, 1316, 1644, 1705
Tru1I TTAA 2 cut(s) 1281, 1735
Tru9I TTAA 2 cut(s) 1281, 1735
TscAI CASTG 5 cut(s) 394, 1107, 1268, 1551, 1674
TseFI GTSAC 1 cut(s) 1229
TseI GCWGC 1 cut(s) 666
Tsp45I GTSAC 1 cut(s) 1229
TspDTI ATGAA 2 cut(s) 4, 1014
TspGWI ACGGA 1 cut(s) 1575
TspRI CASTG 5 cut(s) 394, 1107, 1268, 1551, 1674
VpaK11BI GGWCC 2 cut(s) 1477, 1612
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 2 cut(s) 932, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 1682
XspI CTAG 3 cut(s) 117, 1313, 1697
Zsp2I ATGCAT 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.