pycom05g05950

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0006913
Physical Location & Seq
Forward (+)
7565096 .. 7566655
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g05950.1

Sequence Viewer

Length: 1482 bp
ATGAAAGAAGTGGAGGGCATTCCCAATTACATAACAAATTATGGAGGCAGAAAAGGAGTTAAGACTCCTTACACAATGAGTTATGCAACCAAAGAAGAAGTCAAGACTCCTTATACAATGAGTTATGCTACCAAAGAAGAAGTCCAGACTCCATACACAATGAGTTATGCAACTAAAGAAAGCAAAAAGGAAGTTAAAACTCCTTACACAATGAGTTATGCAGCCAAAGAAGAAGTTTTGACTCCTTACACAATGAGTTATGCAACTAAAGAAGGCAAAAAGGAAGCTGAAACTCCTTACACAATGAGTTATGCAACCAAAGAAGAAGTCAAGACTCCTTACATAATGAGTTATGCAACTAAGGAAGGCAAAAAGGAAGTTGAGACTCCTTATGCAATGAGTTATGCAACCAAAGGAAGCAAAAAGGCAGTTGAGACTCCTTACGCAATGAATTATGCAACCAAAGAAAGGAAAGAGGAAGTTGAGACTCCTTACACAATGAGTTACGCAACCAAAGAAGCAGGGACTCCTTACATAACGGGTTACAGAACCAAAGAAGCGGAGACTCCTTACACAATGAGTTACGCAACCAAAGAAGCAGAGACTCCTTACATAATGGGTTACAGAACCAAAGAAGCGGAGACTCCTTACACAATGAGTTATGCAACAAAAGAAGGAAAAAAGGAAGTTGAGACTCCTTACAAAATGAGTTATGGAACAGAAGAAGTTGAGCCTTCTCATGAGCATGTTCATATTCATATGCATCCACAATCTCAACCTCACATGGATCACAATGAAGCATCCAAGCAAGGATTTTTCACGTTCGATGATTTACACTGCGGTATGAGAATGCCTCTCCACTTTCCCAACCAAGAACATTCTCGTTTCCTGCCTAAAGAAGTAGCTGATTCCATCCCATTCTCAACACCACATATCCCACAAATTCGTCAACTCTTCTCAATCCCACAAGGTTCTCAAGAAGCGAAGAATGTCGCATATGCACTTGAACAATGTGAGATGAAACCCATCAAGGGTGAGACGAAGTTTTGTGCCACTTCTCTGGAGTCCATGACAAATTTTGTTACCAAGATCATCGGTTCAGGTGTTCGCTTCAACATTCTCTCAACCGAGCACCCCACAACATCAACATCCATCACACAAAGCTACACTATCTTAGAAGAGCCTAAACAAGTTTTGGCTTCCAAAATGGTTTTTTGCCATCCATTGGCCTATCCTTATGCAGTGTTCTTCTGCCACCATTTTGAGAAAGACACCAAGTTCTTCAAGGTTAAACTTGGAGGTGAGAATGGTGATAAGGTTCAAGCTGTAGCTGTTTGCCACATGGACACTTCTGATTGGGACCCTGCCCACTCCTTATTTTCCCTTCTTGGAATTAAAGCTAGTGCTTCGTCTCCAGTTTGCCATTTCTTGCCCGAAAATCATCTAGTTTGGATCCCATCACCTGCAACATTTGCTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

494

Amino Acids

55.92

Weight (kDa)

6.46

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 272 - 485 3.3e-73 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1471
Acc36I ACCTGC 1 cut(s) 1471
AccB7I CCANNNNNTGG 1 cut(s) 1225
AciI CCGC 3 cut(s) 560, 638, 840
AclWI GGATC 3 cut(s) 795, 1447, 1460
AcsI RAATTY 2 cut(s) 942, 1075
AfiI CCNNNNNNNGG 3 cut(s) 468, 1031, 1225
AgsI TTSAA 4 cut(s) 1007, 1114, 1285, 1322
AluBI AGCT 6 cut(s) 287, 905, 1164, 1325, 1331, 1400
AluI AGCT 6 cut(s) 287, 905, 1164, 1325, 1331, 1400
Alw21I GWGCWC 1 cut(s) 1134
Alw26I GTCTC 9 cut(s) 377, 428, 479, 557, 596, 635, 686, 1031, 1416
AlwI GGATC 3 cut(s) 795, 1447, 1460
AoxI GGCC 1 cut(s) 1227
ApeKI GCWGC 1 cut(s) 221
ApoI RAATTY 2 cut(s) 942, 1075
ArsI GACNNNNNNTTYG 6 cut(s) 84, 116, 126, 158, 312, 344
AspS9I GGNCC 1 cut(s) 1360
AsuHPI GGTGA 4 cut(s) 1046, 1313, 1322, 1452
AvaII GGWCC 1 cut(s) 1360
BamHI GGATCC 1 cut(s) 1452
Bbv12I GWGCWC 1 cut(s) 1134
BbvI GCAGC 1 cut(s) 233
BccI CCATC 5 cut(s) 920, 1034, 1160, 1227, 1465
BcoDI GTCTC 9 cut(s) 377, 428, 479, 557, 596, 635, 686, 1031, 1416
BfaI CTAG 2 cut(s) 1401, 1445
BfmI CTRYAG 1 cut(s) 1326
BfuAI ACCTGC 1 cut(s) 1471
BisI GCNGC 1 cut(s) 222
BlsI GCNGC 1 cut(s) 223
Bme18I GGWCC 1 cut(s) 1360
BmgT120I GGNCC 1 cut(s) 1360
BmiI GGNNCC 3 cut(s) 1361, 1362, 1454
BmsI GCATC 2 cut(s) 772, 809
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpmI CTGGAG 2 cut(s) 1082, 1398
BpuEI CTTGAG 1 cut(s) 960
Bsc4I CCNNNNNNNGG 3 cut(s) 468, 1031, 1225
Bse1I ACTGG 1 cut(s) 1415
Bse3DI GCAATG 2 cut(s) 402, 453
BseGI GGATG 5 cut(s) 763, 800, 912, 1148, 1219
BseLI CCNNNNNNNGG 3 cut(s) 468, 1031, 1225
BseMI GCAATG 2 cut(s) 402, 453
BseNI ACTGG 1 cut(s) 1415
BseXI GCAGC 1 cut(s) 233
BshFI GGCC 1 cut(s) 1229
BsiHKAI GWGCWC 1 cut(s) 1134
BslFI GGGAC 2 cut(s) 538, 1373
BslI CCNNNNNNNGG 3 cut(s) 468, 1031, 1225
BsmAI GTCTC 9 cut(s) 377, 428, 479, 557, 596, 635, 686, 1031, 1416
BsmBI CGTCTC 2 cut(s) 1031, 1416
BsmFI GGGAC 2 cut(s) 538, 1373
BsmI GAATGC 2 cut(s) 18, 855
BsnI GGCC 1 cut(s) 1229
Bsp1286I GDGCHC 1 cut(s) 1134
Bsp143I GATC 3 cut(s) 787, 1089, 1452
BspACI CCGC 3 cut(s) 560, 638, 840
BspANI GGCC 1 cut(s) 1229
BspHI TCATGA 1 cut(s) 739
BspLI GGNNCC 3 cut(s) 1361, 1362, 1454
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 3 cut(s) 795, 1447, 1460
BspQI GCTCTTC 1 cut(s) 1173
BsrDI GCAATG 2 cut(s) 402, 453
BsrI ACTGG 1 cut(s) 1415
BssMI GATC 3 cut(s) 787, 1089, 1452
Bst6I CTCTTC 2 cut(s) 959, 1173
BstAPI GCANNNNNTGC 1 cut(s) 1472
BstDEI CTNAG 2 cut(s) 360, 1174
BstF5I GGATG 5 cut(s) 763, 800, 912, 1148, 1219
BstKTI GATC 3 cut(s) 790, 1092, 1455
BstMAI GTCTC 9 cut(s) 377, 428, 479, 557, 596, 635, 686, 1031, 1416
BstMBI GATC 3 cut(s) 787, 1089, 1452
BstMWI GCNNNNNNNGC 1 cut(s) 1472
BstNSI RCATGY 1 cut(s) 749
BstSFI CTRYAG 1 cut(s) 1326
BstV1I GCAGC 1 cut(s) 233
BstX2I RGATCY 1 cut(s) 1452
BstXI CCANNNNNNTGG 1 cut(s) 1060
BstYI RGATCY 1 cut(s) 1452
BsuRI GGCC 1 cut(s) 1229
BtsCI GGATG 5 cut(s) 763, 800, 912, 1148, 1219
BtsI GCAGTG 2 cut(s) 835, 1248
BtsIMutI CAGTG 2 cut(s) 835, 1248
BveI ACCTGC 1 cut(s) 1471
CciI TCATGA 1 cut(s) 739
Cfr13I GGNCC 1 cut(s) 1360
CviAII CATG 5 cut(s) 740, 746, 784, 1069, 1342
DdeI CTNAG 2 cut(s) 360, 1174
DpnI GATC 3 cut(s) 789, 1091, 1454
DpnII GATC 3 cut(s) 787, 1089, 1452
Eam1104I CTCTTC 2 cut(s) 959, 1173
EarI CTCTTC 2 cut(s) 959, 1173
Eco47I GGWCC 1 cut(s) 1360
EcoO109I RGGNCCY 1 cut(s) 1360
EcoT22I ATGCAT 1 cut(s) 765
Esp3I CGTCTC 2 cut(s) 1031, 1416
FaeI CATG 5 cut(s) 743, 749, 787, 1072, 1345
FaqI GGGAC 2 cut(s) 538, 1373
FatI CATG 5 cut(s) 739, 745, 783, 1068, 1341
FauNDI CATATG 2 cut(s) 759, 997
Fnu4HI GCNGC 1 cut(s) 222
FokI GGATG 5 cut(s) 750, 787, 899, 1135, 1206
Fsp4HI GCNGC 1 cut(s) 222
FspBI CTAG 2 cut(s) 1401, 1445
GluI GCNGC 1 cut(s) 222
GsuI CTGGAG 2 cut(s) 1082, 1398
HaeIII GGCC 1 cut(s) 1229
Hin1II CATG 5 cut(s) 743, 749, 787, 1072, 1345
HincII GTYRAC 1 cut(s) 950
HindII GTYRAC 1 cut(s) 950
HphI GGTGA 4 cut(s) 1046, 1313, 1322, 1452
Hpy166II GTNNAC 1 cut(s) 950
Hpy188I TCNGA 1 cut(s) 1354
Hpy188III TCNNGA 6 cut(s) 103, 145, 331, 740, 977, 1061
Hpy8I GTNNAC 1 cut(s) 950
HpyAV CCTTC 5 cut(s) 266, 359, 668, 744, 1394
HpyCH4IV ACGT 1 cut(s) 821
HpyF10VI GCNNNNNNNGC 1 cut(s) 1472
HpyF3I CTNAG 2 cut(s) 360, 1174
HpySE526I ACGT 1 cut(s) 821
Hsp92II CATG 5 cut(s) 743, 749, 787, 1072, 1345
KflI GGGWCCC 1 cut(s) 1360
Kzo9I GATC 3 cut(s) 787, 1089, 1452
LguI GCTCTTC 1 cut(s) 1173
LpnPI CCDG 8 cut(s) 158, 507, 902, 1046, 1086, 1377, 1428, 1476
Lsp1109I GCAGC 1 cut(s) 233
LweI GCATC 2 cut(s) 772, 809
MaeI CTAG 2 cut(s) 1401, 1445
MaeII ACGT 1 cut(s) 821
MaeIII GTNAC 5 cut(s) 503, 542, 581, 620, 1081
MalI GATC 3 cut(s) 789, 1091, 1454
MboI GATC 3 cut(s) 787, 1089, 1452
MflI RGATCY 1 cut(s) 1452
MhlI GDGCHC 1 cut(s) 1134
MluCI AATT 6 cut(s) 25, 37, 451, 942, 1075, 1392
MnlI CCTC 6 cut(s) 7, 38, 469, 789, 864, 1292
Mph1103I ATGCAT 1 cut(s) 765
MseI TTAA 4 cut(s) 60, 195, 1290, 1395
MslI CAYNNNNRTG 1 cut(s) 744
Mva1269I GAATGC 2 cut(s) 18, 855
MwoI GCNNNNNNNGC 1 cut(s) 1472
NdeI CATATG 2 cut(s) 759, 997
NdeII GATC 3 cut(s) 787, 1089, 1452
NlaIII CATG 5 cut(s) 743, 749, 787, 1072, 1345
NlaIV GGNNCC 3 cut(s) 1361, 1362, 1454
NsiI ATGCAT 1 cut(s) 765
NspI RCATGY 1 cut(s) 749
PagI TCATGA 1 cut(s) 739
PaqCI CACCTGC 1 cut(s) 1471
PciSI GCTCTTC 1 cut(s) 1173
PctI GAATGC 2 cut(s) 18, 855
PfeI GAWTC 1 cut(s) 908
PflMI CCANNNNNTGG 1 cut(s) 1225
PkrI GCNGC 1 cut(s) 223
PpuMI RGGWCCY 1 cut(s) 1360
Psp5II RGGWCCY 1 cut(s) 1360
PspN4I GGNNCC 3 cut(s) 1361, 1362, 1454
PspPI GGNCC 1 cut(s) 1360
PspPPI RGGWCCY 1 cut(s) 1360
PsuI RGATCY 1 cut(s) 1452
RseI CAYNNNNRTG 1 cut(s) 744
SapI GCTCTTC 1 cut(s) 1173
SaqAI TTAA 4 cut(s) 60, 195, 1290, 1395
SatI GCNGC 1 cut(s) 222
Sau3AI GATC 3 cut(s) 787, 1089, 1452
Sau96I GGNCC 1 cut(s) 1360
SduI GDGCHC 1 cut(s) 1134
SfaNI GCATC 2 cut(s) 772, 809
SfcI CTRYAG 1 cut(s) 1326
SinI GGWCC 1 cut(s) 1360
SmiMI CAYNNNNRTG 1 cut(s) 744
SmlI CTYRAG 1 cut(s) 975
SmoI CTYRAG 1 cut(s) 975
Sse9I AATT 6 cut(s) 25, 37, 451, 942, 1075, 1392
SsiI CCGC 3 cut(s) 560, 638, 840
SspMI CTAG 2 cut(s) 1401, 1445
TaiI ACGT 1 cut(s) 824
TaqI TCGA 1 cut(s) 825
TasI AATT 6 cut(s) 25, 37, 451, 942, 1075, 1392
TfiI GAWTC 1 cut(s) 908
Tru1I TTAA 4 cut(s) 60, 195, 1290, 1395
Tru9I TTAA 4 cut(s) 60, 195, 1290, 1395
TscAI CASTG 2 cut(s) 842, 1248
TseI GCWGC 1 cut(s) 221
TspDTI ATGAA 6 cut(s) 17, 464, 740, 746, 810, 1034
TspRI CASTG 2 cut(s) 842, 1248
Van91I CCANNNNNTGG 1 cut(s) 1225
VpaK11BI GGWCC 1 cut(s) 1360
XapI RAATTY 2 cut(s) 942, 1075
XceI RCATGY 1 cut(s) 749
XspI CTAG 2 cut(s) 1401, 1445
Zsp2I ATGCAT 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.