Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0003242

Physical Location & Seq

Genomic Coordinates Reverse (-)

33464095 .. 33466760

Gene Structure 2666 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1205400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGAGTTTAATATCGCAGAATGTTCCTTCCGGTTTTAAAGCCAACAAGGCTAAAAGGGATGATGATGGCGCTGACGAGCCTTTGTTTCTGCAAGGAGATGAAGACAATGGGGATGGAGAAGCGATGGGTTTGGATATTATGAGGACGAAGAAAAGAAAGAAAGCGCGTAAGGAAGATGATGAGAAATTGGTGGTGGAACAAAAAGAAAAGGAGCAGCTGGAGGACTCATTGTTTGGCGCCATTAATTCCCCACTTGAGTTTGGGAAGGAGGATGAGGAGGAGGTCGGAGATGGAGCGGATTTGTTCTTTGTGGACCGTTCTGCCAATGGTGTGCGTTCGGTTGATGAAGAGGATGGAGAGTTATCAGAAGAGGAGACTCAGGAAAGGAAACCTGTGTGGGTGGACGAGGAAGAGGAGAAGGCCAAAATAAATATTGCTAAAGTTAATAGGTTAAGGAAGCTGAGGAAGGAGGAGGAGGAGAGTTTGATTTCGGGTTCAGATTATGTGTCGAGATTGAGGGCTCAGCACGCTAAGCTGAACCCAGGCACAGAATGGGCTCAACTTGATCGACAGTTGCGGGAGAGTATTTATTCTGATGATGAATCATCCGATGAACAGAATCAGGTAGCAGTGGCCCGTGGCTACAAAGGTGTAGACACTGTTGATGATCTCCTTCGAACGAATGAGGATCTTGTTGTGAAGAGCAGTTCAAAGTTATTACCTGGACTTCTTCAATATTCAGCACTTCTAAATGCAAATGCAGAGGAACCTTCAAATGGACCGATAAACTCAGTGCAGTTCCATAGAAACGGGCAGTTACTTCTTGCTGCTGGGTTGGATAGAAGGCTTAGGTTTTTTCAAATTGATGGCAAGCGAAATACTAAAATAGAAAGCATCTTCCTTGATGACTGTCCCATTCGAAAGGCGTCTTTTTTGCCTGATGGGTCGCAGGTTATTATTGCTGGAAGGAGGAACTTCTTTTACAGCTTTGATTTAGTGAAGGCAAAAGTAGATAAAATTGGTCCCCTGGTTGGTAGAGAGGAGAAAAGCTTGGAATGTTTTGAAGTTTCCCCTGATTCTAGTACAATTGCCTGTGTGGGCAATGAAGGCTATATCCTGTTGGTGTCCTCAAAAACGAAGGAATTGATCCAAACACTGAAGATGAATGGAACTGTTCGTTCTTTAGCTTTTACCAATGATGGGAAACAACTGTTGAGCTCCGGCGGAGATGGACAGGTCTACCACTGGGATCTGAGAACTGGAGCTTGCATCCATAAGGCTGTTGATGAAGGTTGCATAAATGGTACATCTCTCTGTACATCTCCAACCGGAACATTGTTTGCTGCTGGTTCAGACAGCGGGATTGTCAACATTTACAATAGAGAGGAGTTTTTGGGGGGAAAGAGAAAACCCATCAAGACCATCGAGAATCTTACAACGAAAGTAGACTTTCTCAAGTTCAATGGCGATGCTCAAATACTGGCCATTTGTTCGAGCATGAAGAAGGATAGCTTGAAGTTGATACATGTTCCATCATTTACTGTTTTCTCCAACTGGCCTCCGCCGAGAAGGTCCATACATTATCCCCGCTGTTTGGATTTCAGTCCCGGTGGAGGTTTCATGGCTGTGGGAAATGCTGCTGGAAAAGTGTTGTTGTACAAGTTGCATCACTACCATCACGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000462 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0030686 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

562

Amino Acids

62.32

Weight (kDa)

5.37

Isoelectric Point (pI)

46.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	258 - 426	4.2e-08	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	259 - 498	2.1e-19	Prp19 WD40 domain
WDR55	PF24796	261 - 464	2.7e-11	WDR55
Beta-prop_EML	PF23409	261 - 451	1.8e-08	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	263 - 426	7.4e-13	WDHD1 first WD40 domain
WD40_Gbeta	PF25391	264 - 459	2.5e-07	G protein beta WD-40 repeat protein
Beta-prop_WDR5	PF25175	309 - 556	2.6e-12	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	319 - 514	5.6e-11	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	346 - 425	1e-07	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	348 - 450	5.1e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	349 - 427	1.2e-08	WDR36/Utp21 first beta-propeller
Beta-prop_THOC3	PF25174	354 - 519	4.3e-18	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	355 - 498	3.3e-11	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14050
fragaria_vesca	FvH4_2g22480 FvH4_2g22480 FvH4_5g20520
malus_domestica	MD05G1205300.v1.1 MD05G1205400.v1.1 MD10G1192400.v1.1
prunus_persica	Prupe.5G054300_v2.0.a1 Prupe.5G054300_v2.0.a1 Prupe.8G231800_v2.0.a1
pyrus_communis	pycom05g19150 pycom12426g00550 pycom13g23680
rosa_chinensis	RchiOBHm_Chr6g0289431 RchiOBHm_Chr7g0205871 RchiOBHm_Chr7g0205881
rosa_laevigata	RLG00000012303
rosa_multiflora	Rmu_sc0000076.1_g000034 Rmu_sc0001527.1_g000035 Rmu_sc0004084.1_g000004
rosa_roxburghii	Rroxscaffold_3G00251900 Rroxscaffold_7G00179220
rosa_rugosa	Rorug06G0203300 Rorug06G0203400 Rorug07G0093600
rosa_samantha	Rh6AG314600 Rh6BG322100 Rh6CG328300 Rh6DG314000 Rh7AG225300 Rh7BG221200 Rh7CG238900 Rh7CG239300 Rh7CG239400 Rh7DG232000
rosa_wichuraiana	Rw6G027180 Rw7G019430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	940
AccB1I	GGYRCC	1 cut(s)	236
AccBSI	CCGCTC	1 cut(s)	296
AccI	GTMKAC	3 cut(s)	654, 1239, 1446
AccII	CGCG	1 cut(s)	166
AciI	CCGC	6 cut(s)	296, 577, 1224, 1359, 1562, 1588
AclWI	GGATC	3 cut(s)	696, 1141, 1257
AcoI	YGGCCR	1 cut(s)	1482
AcuI	CTGAAG	1 cut(s)	1178
AcyI	GRCGYC	2 cut(s)	237, 926
AfaI	GTAC	4 cut(s)	1084, 1306, 1318, 1658
AfiI	CCNNNNNNNGG	5 cut(s)	776, 1031, 1200, 1594, 1613
AflIII	ACRYGT	1 cut(s)	1525
AgsI	TTSAA	7 cut(s)	711, 734, 774, 860, 1064, 1462, 1516
AjnI	CCWGG	3 cut(s)	541, 721, 1026
AluBI	AGCT	9 cut(s)	217, 460, 535, 987, 1050, 1187, 1218, 1265, 1512
AluI	AGCT	9 cut(s)	217, 460, 535, 987, 1050, 1187, 1218, 1265, 1512
Alw21I	GWGCWC	1 cut(s)	1220
Alw26I	GTCTC	1 cut(s)	368
AlwI	GGATC	3 cut(s)	696, 1141, 1257
AoxI	GGCC	4 cut(s)	420, 633, 1482, 1556
ApeKI	GCWGC	4 cut(s)	214, 827, 1343, 1637
ArsI	GACNNNNNNTTYG	2 cut(s)	215, 247
AseI	ATTAAT	1 cut(s)	243
AspLEI	GCGC	3 cut(s)	71, 166, 239
AspS9I	GGNCC	5 cut(s)	313, 634, 779, 1022, 1572
AsuC2I	CCSGG	1 cut(s)	1608
AsuII	TTCGAA	2 cut(s)	676, 919
AvaII	GGWCC	4 cut(s)	313, 779, 1022, 1572
BalI	TGGCCA	1 cut(s)	1484
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	3 cut(s)	523, 559, 1220
BbsI	GAAGAC	1 cut(s)	108
Bbv12I	GWGCWC	1 cut(s)	1220
BbvCI	CCTCAGC	1 cut(s)	461
BbvI	GCAGC	4 cut(s)	226, 814, 1330, 1624
BciT130I	CCWGG	3 cut(s)	543, 723, 1028
BcnI	CCSGG	1 cut(s)	1608
BcoDI	GTCTC	1 cut(s)	368
BfaI	CTAG	1 cut(s)	1080
BfoI	RGCGCY	2 cut(s)	72, 240
BfuAI	ACCTGC	1 cut(s)	940
BglI	GCCNNNNNGGC	1 cut(s)	47
BisI	GCNGC	4 cut(s)	215, 828, 1344, 1638
BlpI	GCTNAGC	2 cut(s)	522, 531
BlsI	GCNGC	4 cut(s)	216, 829, 1345, 1639
Bme1390I	CCNGG	4 cut(s)	543, 723, 1028, 1608
Bme18I	GGWCC	4 cut(s)	313, 779, 1022, 1572
BmgT120I	GGNCC	5 cut(s)	313, 634, 779, 1022, 1572
BmiI	GGNNCC	3 cut(s)	238, 768, 1024
BmrFI	CCNGG	4 cut(s)	543, 723, 1028, 1608
BmrI	ACTGGG	1 cut(s)	1255
BmsI	GCATC	4 cut(s)	903, 1278, 1459, 1675
BmuI	ACTGGG	1 cut(s)	1255
BpiI	GAAGAC	1 cut(s)	108
BpmI	CTGGAG	2 cut(s)	239, 1281
Bpu10I	CCTNAGC	2 cut(s)	461, 848
Bpu1102I	GCTNAGC	2 cut(s)	522, 531
Bpu14I	TTCGAA	2 cut(s)	676, 919
BpuEI	CTTGAG	2 cut(s)	275, 1439
BpuMI	CCSGG	1 cut(s)	1608
BsaHI	GRCGYC	2 cut(s)	237, 926
BsaJI	CCNNGG	3 cut(s)	541, 637, 1026
BsaWI	WCCGGW	2 cut(s)	29, 1328
Bsc4I	CCNNNNNNNGG	5 cut(s)	776, 1031, 1200, 1594, 1613
Bse1I	ACTGG	4 cut(s)	1250, 1264, 1485, 1559
Bse3DI	GCAATG	1 cut(s)	1108
BseBI	CCWGG	3 cut(s)	543, 723, 1028
BseDI	CCNNGG	3 cut(s)	541, 637, 1026
BseGI	GGATG	6 cut(s)	64, 118, 277, 358, 605, 1269
BseLI	CCNNNNNNNGG	5 cut(s)	776, 1031, 1200, 1594, 1613
BseMI	GCAATG	1 cut(s)	1108
BseMII	CTCAG	5 cut(s)	392, 452, 536, 804, 1244
BseNI	ACTGG	4 cut(s)	1250, 1264, 1485, 1559
BseRI	GAGGAG	9 cut(s)	290, 293, 386, 428, 485, 488, 491, 1055, 1400
BseXI	GCAGC	4 cut(s)	226, 814, 1330, 1624
BseYI	CCCAGC	1 cut(s)	830
BsgI	GTGCAG	1 cut(s)	815
Bsh1236I	CGCG	1 cut(s)	166
BshFI	GGCC	4 cut(s)	422, 635, 1484, 1558
BshNI	GGYRCC	1 cut(s)	236
BsiHKAI	GWGCWC	1 cut(s)	1220
BsiSI	CCGG	4 cut(s)	30, 1221, 1329, 1608
BslFI	GGGAC	3 cut(s)	897, 1008, 1590
BslI	CCNNNNNNNGG	5 cut(s)	776, 1031, 1200, 1594, 1613
BsmAI	GTCTC	1 cut(s)	368
BsmFI	GGGAC	3 cut(s)	897, 1008, 1590
BsnI	GGCC	4 cut(s)	422, 635, 1484, 1558
Bsp119I	TTCGAA	2 cut(s)	676, 919
Bsp1286I	GDGCHC	3 cut(s)	523, 559, 1220
Bsp1407I	TGTACA	2 cut(s)	1316, 1656
Bsp143I	GATC	5 cut(s)	565, 667, 688, 1146, 1249
Bsp1720I	GCTNAGC	2 cut(s)	522, 531
BspACI	CCGC	6 cut(s)	296, 577, 1224, 1359, 1562, 1588
BspANI	GGCC	4 cut(s)	422, 635, 1484, 1558
BspCNI	CTCAG	5 cut(s)	391, 453, 535, 803, 1245
BspFNI	CGCG	1 cut(s)	166
BspLI	GGNNCC	3 cut(s)	238, 768, 1024
BspMI	ACCTGC	1 cut(s)	940
BspPI	GGATC	3 cut(s)	696, 1141, 1257
BspQI	GCTCTTC	1 cut(s)	695
BspT104I	TTCGAA	2 cut(s)	676, 919
BspT107I	GGYRCC	1 cut(s)	236
BsrBI	CCGCTC	1 cut(s)	296
BsrDI	GCAATG	1 cut(s)	1108
BsrGI	TGTACA	2 cut(s)	1316, 1656
BsrI	ACTGG	4 cut(s)	1250, 1264, 1485, 1559
BssECI	CCNNGG	3 cut(s)	541, 637, 1026
BssMI	GATC	5 cut(s)	565, 667, 688, 1146, 1249
BssNI	GRCGYC	2 cut(s)	237, 926
Bst2UI	CCWGG	3 cut(s)	543, 723, 1028
Bst4CI	ACNGT	7 cut(s)	317, 573, 661, 911, 1174, 1212, 1543
Bst6I	CTCTTC	4 cut(s)	342, 363, 405, 695
BstACI	GRCGYC	2 cut(s)	237, 926
BstAUI	TGTACA	2 cut(s)	1316, 1656
BstBI	TTCGAA	2 cut(s)	676, 919
BstC8I	GCNNGC	3 cut(s)	528, 872, 1267
BstDEI	CTNAG	7 cut(s)	378, 461, 522, 531, 790, 848, 1253
BstDSI	CCRYGG	1 cut(s)	637
BstF5I	GGATG	6 cut(s)	64, 118, 277, 358, 605, 1269
BstFNI	CGCG	1 cut(s)	166
BstH2I	RGCGCY	2 cut(s)	72, 240
BstHHI	GCGC	3 cut(s)	71, 166, 239
BstKTI	GATC	5 cut(s)	568, 670, 691, 1149, 1252
BstMAI	GTCTC	1 cut(s)	368
BstMBI	GATC	5 cut(s)	565, 667, 688, 1146, 1249
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 527, 532, 1107
BstNI	CCWGG	3 cut(s)	543, 723, 1028
BstNSI	RCATGY	1 cut(s)	1529
BstSCI	CCNGG	4 cut(s)	541, 721, 1026, 1606
BstUI	CGCG	1 cut(s)	166
BstV1I	GCAGC	4 cut(s)	226, 814, 1330, 1624
BstV2I	GAAGAC	1 cut(s)	108
BstX2I	RGATCY	2 cut(s)	688, 1249
BstYI	RGATCY	2 cut(s)	688, 1249
BsuRI	GGCC	4 cut(s)	422, 635, 1484, 1558
BtgI	CCRYGG	1 cut(s)	637
BtgZI	GCGATG	2 cut(s)	137, 1482
BtsCI	GGATG	6 cut(s)	64, 118, 277, 358, 605, 1269
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	5 cut(s)	636, 657, 798, 1154, 1243
BveI	ACCTGC	1 cut(s)	940
Cac8I	GCNNGC	3 cut(s)	528, 872, 1267
CfoI	GCGC	3 cut(s)	71, 166, 239
Cfr13I	GGNCC	5 cut(s)	313, 634, 779, 1022, 1572
CseI	GACGC	1 cut(s)	915
Csp6I	GTAC	4 cut(s)	1083, 1305, 1317, 1657
CviAII	CATG	3 cut(s)	1498, 1526, 1621
CviQI	GTAC	4 cut(s)	1083, 1305, 1317, 1657
DdeI	CTNAG	7 cut(s)	378, 461, 522, 531, 790, 848, 1253
DinI	GGCGCC	1 cut(s)	238
DpnI	GATC	5 cut(s)	567, 669, 690, 1148, 1251
DpnII	GATC	5 cut(s)	565, 667, 688, 1146, 1249
DraI	TTTAAA	1 cut(s)	37
EaeI	YGGCCR	1 cut(s)	1482
Eam1104I	CTCTTC	4 cut(s)	342, 363, 405, 695
EarI	CTCTTC	4 cut(s)	342, 363, 405, 695
EciI	GGCGGA	2 cut(s)	1239, 1551
Ecl136II	GAGCTC	1 cut(s)	1218
Eco24I	GRGCYC	3 cut(s)	523, 559, 1220
Eco47I	GGWCC	4 cut(s)	313, 779, 1022, 1572
Eco53kI	GAGCTC	1 cut(s)	1218
Eco57I	CTGAAG	1 cut(s)	1178
EcoICRI	GAGCTC	1 cut(s)	1218
EcoRII	CCWGG	3 cut(s)	541, 721, 1026
EcoT38I	GRGCYC	3 cut(s)	523, 559, 1220
EgeI	GGCGCC	1 cut(s)	238
EheI	GGCGCC	1 cut(s)	238
FaeI	CATG	3 cut(s)	1501, 1529, 1624
FalI	AAGNNNNNCTT	2 cut(s)	1496, 1528
FaqI	GGGAC	3 cut(s)	897, 1008, 1590
FatI	CATG	3 cut(s)	1497, 1525, 1620
FauI	CCCGC	3 cut(s)	570, 1352, 1595
FblI	GTMKAC	3 cut(s)	654, 1239, 1446
Fnu4HI	GCNGC	4 cut(s)	215, 828, 1344, 1638
FokI	GGATG	6 cut(s)	71, 125, 284, 365, 592, 1256
FriOI	GRGCYC	3 cut(s)	523, 559, 1220
Fsp4HI	GCNGC	4 cut(s)	215, 828, 1344, 1638
FspBI	CTAG	1 cut(s)	1080
GlaI	GCGC	3 cut(s)	70, 165, 238
GluI	GCNGC	4 cut(s)	215, 828, 1344, 1638
GsaI	CCCAGC	1 cut(s)	834
GsuI	CTGGAG	2 cut(s)	239, 1281
HaeII	RGCGCY	2 cut(s)	72, 240
HaeIII	GGCC	4 cut(s)	422, 635, 1484, 1558
HapII	CCGG	4 cut(s)	30, 1221, 1329, 1608
HgaI	GACGC	1 cut(s)	915
HhaI	GCGC	3 cut(s)	71, 166, 239
Hin1I	GRCGYC	2 cut(s)	237, 926
Hin1II	CATG	3 cut(s)	1501, 1529, 1624
Hin6I	GCGC	3 cut(s)	69, 164, 237
HinP1I	GCGC	3 cut(s)	69, 164, 237
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
HindIII	AAGCTT	1 cut(s)	1048
HinfI	GANTC	6 cut(s)	224, 376, 602, 619, 1076, 1429
HpaII	CCGG	4 cut(s)	30, 1221, 1329, 1608
Hpy166II	GTNNAC	6 cut(s)	313, 403, 655, 1240, 1369, 1447
Hpy188I	TCNGA	7 cut(s)	287, 367, 499, 595, 610, 1254, 1354
Hpy188III	TCNNGA	4 cut(s)	380, 510, 1417, 1426
Hpy8I	GTNNAC	6 cut(s)	313, 403, 655, 1240, 1369, 1447
HpyCH4III	ACNGT	7 cut(s)	317, 573, 661, 911, 1174, 1212, 1543
HpyCH4V	TGCA	7 cut(s)	91, 755, 761, 796, 1269, 1296, 1666
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 527, 532, 1107
HpyF3I	CTNAG	7 cut(s)	378, 461, 522, 531, 790, 848, 1253
Hsp92I	GRCGYC	2 cut(s)	237, 926
Hsp92II	CATG	3 cut(s)	1501, 1529, 1624
HspAI	GCGC	3 cut(s)	69, 164, 237
KasI	GGCGCC	1 cut(s)	236
Kzo9I	GATC	5 cut(s)	565, 667, 688, 1146, 1249
LguI	GCTCTTC	1 cut(s)	695
LmnI	GCTCC	4 cut(s)	211, 293, 1223, 1262
Lsp1109I	GCAGC	4 cut(s)	226, 814, 1330, 1624
LweI	GCATC	4 cut(s)	903, 1278, 1459, 1675
MaeI	CTAG	1 cut(s)	1080
MaeIII	GTNAC	1 cut(s)	816
MalI	GATC	5 cut(s)	567, 669, 690, 1148, 1251
MbiI	CCGCTC	1 cut(s)	296
MboI	GATC	5 cut(s)	565, 667, 688, 1146, 1249
MfeI	CAATTG	1 cut(s)	1086
MflI	RGATCY	2 cut(s)	688, 1249
MhlI	GDGCHC	3 cut(s)	523, 559, 1220
MlsI	TGGCCA	1 cut(s)	1484
MluCI	AATT	6 cut(s)	185, 244, 861, 1017, 1086, 1142
MluNI	TGGCCA	1 cut(s)	1484
Mly113I	GGCGCC	1 cut(s)	237
MlyI	GAGTC	2 cut(s)	218, 370
MmeI	TCCRAC	4 cut(s)	265, 816, 1349, 1575
Mox20I	TGGCCA	1 cut(s)	1484
MscI	TGGCCA	1 cut(s)	1484
MseI	TTAA	5 cut(s)	8, 36, 243, 444, 452
MslI	CAYNNNNRTG	1 cut(s)	1625
Msp20I	TGGCCA	1 cut(s)	1484
MspA1I	CMGCKG	3 cut(s)	217, 1359, 1590
MspI	CCGG	4 cut(s)	30, 1221, 1329, 1608
MspR9I	CCNGG	4 cut(s)	543, 723, 1028, 1608
MunI	CAATTG	1 cut(s)	1086
MvaI	CCWGG	3 cut(s)	543, 723, 1028
MvnI	CGCG	1 cut(s)	166
MwoI	GCNNNNNNNGC	4 cut(s)	47, 527, 532, 1107
NarI	GGCGCC	1 cut(s)	237
NciI	CCSGG	1 cut(s)	1608
NdeII	GATC	5 cut(s)	565, 667, 688, 1146, 1249
NlaIII	CATG	3 cut(s)	1501, 1529, 1624
NlaIV	GGNNCC	3 cut(s)	238, 768, 1024
NmeAIII	GCCGAG	1 cut(s)	1590
NspI	RCATGY	1 cut(s)	1529
NspV	TTCGAA	2 cut(s)	676, 919
PciI	ACATGT	1 cut(s)	1525
PciSI	GCTCTTC	1 cut(s)	695
PfeI	GAWTC	4 cut(s)	602, 619, 1076, 1429
PkrI	GCNGC	4 cut(s)	216, 829, 1345, 1639
PleI	GAGTC	2 cut(s)	218, 370
PluTI	GGCGCC	1 cut(s)	240
PpsI	GAGTC	2 cut(s)	218, 370
PscI	ACATGT	1 cut(s)	1525
PshBI	ATTAAT	1 cut(s)	243
Psp124BI	GAGCTC	1 cut(s)	1220
Psp6I	CCWGG	3 cut(s)	541, 721, 1026
PspFI	CCCAGC	1 cut(s)	830
PspGI	CCWGG	3 cut(s)	541, 721, 1026
PspN4I	GGNNCC	3 cut(s)	238, 768, 1024
PspPI	GGNCC	5 cut(s)	313, 634, 779, 1022, 1572
PsrI	GAACNNNNNNTAC	2 cut(s)	965, 997
PsuI	RGATCY	2 cut(s)	688, 1249
PvuII	CAGCTG	1 cut(s)	217
RsaI	GTAC	4 cut(s)	1084, 1306, 1318, 1658
RsaNI	GTAC	4 cut(s)	1083, 1305, 1317, 1657
RseI	CAYNNNNRTG	1 cut(s)	1625
SacI	GAGCTC	1 cut(s)	1220
SapI	GCTCTTC	1 cut(s)	695
SaqAI	TTAA	5 cut(s)	8, 36, 243, 444, 452
SatI	GCNGC	4 cut(s)	215, 828, 1344, 1638
Sau3AI	GATC	5 cut(s)	565, 667, 688, 1146, 1249
Sau96I	GGNCC	5 cut(s)	313, 634, 779, 1022, 1572
SchI	GAGTC	2 cut(s)	218, 370
ScrFI	CCNGG	4 cut(s)	543, 723, 1028, 1608
SduI	GDGCHC	3 cut(s)	523, 559, 1220
SfaNI	GCATC	4 cut(s)	903, 1278, 1459, 1675
SfoI	GGCGCC	1 cut(s)	238
SfuI	TTCGAA	2 cut(s)	676, 919
SinI	GGWCC	4 cut(s)	313, 779, 1022, 1572
SmiMI	CAYNNNNRTG	1 cut(s)	1625
SmlI	CTYRAG	2 cut(s)	254, 1454
SmoI	CTYRAG	2 cut(s)	254, 1454
Sse9I	AATT	6 cut(s)	185, 244, 861, 1017, 1086, 1142
SsiI	CCGC	6 cut(s)	296, 577, 1224, 1359, 1562, 1588
SspDI	GGCGCC	1 cut(s)	236
SspI	AATATT	2 cut(s)	433, 737
SspMI	CTAG	1 cut(s)	1080
SstI	GAGCTC	1 cut(s)	1220
StyD4I	CCNGG	4 cut(s)	541, 721, 1026, 1606
TaaI	ACNGT	7 cut(s)	317, 573, 661, 911, 1174, 1212, 1543
TaqI	TCGA	6 cut(s)	509, 568, 676, 919, 1425, 1493
TaqII	GACCGA	1 cut(s)	796
TasI	AATT	6 cut(s)	185, 244, 861, 1017, 1086, 1142
TatI	WGTACW	3 cut(s)	1082, 1316, 1656
TfiI	GAWTC	4 cut(s)	602, 619, 1076, 1429
Tru1I	TTAA	5 cut(s)	8, 36, 243, 444, 452
Tru9I	TTAA	5 cut(s)	8, 36, 243, 444, 452
TscAI	CASTG	5 cut(s)	636, 664, 798, 1161, 1250
TseI	GCWGC	4 cut(s)	214, 827, 1343, 1637
TspDTI	ATGAA	9 cut(s)	114, 360, 615, 627, 1119, 1178, 1302, 1514, 1609
TspRI	CASTG	5 cut(s)	636, 664, 798, 1161, 1250
VpaK11BI	GGWCC	4 cut(s)	313, 779, 1022, 1572
VspI	ATTAAT	1 cut(s)	243
XceI	RCATGY	1 cut(s)	1529
XcmI	CCANNNNNNNNNTGG	1 cut(s)	549
XmiI	GTMKAC	3 cut(s)	654, 1239, 1446
XspI	CTAG	1 cut(s)	1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.