Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0003242

Physical Location & Seq

Genomic Coordinates Reverse (-)

22965010 .. 22966647

Gene Structure 1638 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG232000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGATGCTGATGAACCTTCATTTCTGCAAGGGAATGAAGACAATGGTGATGGAAAAGAATCTAATTTAGAGATCATGAGGATGACAAAGAGAAAGAAAGCACGCGACGGAGAGGATGAGAAGGAGGATGAGGAAGAAGCTGTAGACCAGGTCGATAAAGGCTCTGCTTTATTCTTTGTTGACCGTTCTGCAAGTATTGTGCACCCTGGTAATGATGATGATGCAAAATTCTCAGAAGAGGATACTAAGCAAAGGAAACCTGTGTGGATGGATGAGGAAGAGGAAAAGGCCAACATTAATATCGCTAGGGTTAATAGATTGAGGAAGCTGAGGAAGGAAGAGGATGAGAATTTTATTTCTGGTTCTGAGTATGTTTTACAATTAAGGGCTCAGCATGCTAAGCTGAATCCAGGTACAGAATGGTCTCAATTTGATTCACAGTCGAGGTACAATAGATACTCTGATGATGAATCCTCCGATGAAGAAAATAGCTTAGTAGTGCCCCGTGGCTACAAGGAGGTTGGAGCTGTTGATGATCTCCTTCGTACAAATGTGGACCTTGTTGTGAAGAGTGGTGGAAAGTTGCTGCCTGGACTTCTTGAATATTCAACACTTGTGGATGCAAATGCAGAGGAACCATGTAATGGTCCAATTAATTCGGTGCAATTTCATAGAAATGCTCAGTTGCTTCTTGCTGCTGGATTGGATCGAACGCTTAGATTTTTTCAGATTGATGGCAAACGGAATACTAAAATTGAAAGCATTTTCATTGATGATATTCCCATACGGAAGGCAGCTTTCTTGCCTGATGGTTCTCAGGTTATTATAGCTGGAAGGAGGAAATTCTTCTATAGTTTTGATTTAGTAAAGGCGAAAGTTGATAAAATAGGTCCCCTGGTTGGTAGAGAAGAGAAAAGCTTGGAAGTTTTTGAGGTTTCCCCTGATTCAAGTACGATCGCGTTCGTGGGAAATGAAGGTTATATCTTATTGGTTTCCACTAAAACAAAGGAATTGATTGGGACACTCAAGATGAATGGAACAGTTCGCTCTTTAGCTTTTTCCAATGATGGGAAGCAACTATTGAGCTCTGGTGGAGATGGACAGGTTTACCAGTGGGATCTGAGAACAGGGGCCTGCTTCCATAAAATGGTTGATGAAGGTTGTATCAATGGTACAGCCCTTTGTACATCTCCAAATGGATCCTTGTTTGCTGCTGGTTCAGACAGTGGGATTGTTAATATTTATAATAGAGATGAGGTTTTAGGAGGCAAAAGAAAACCAATCAAGACTATCGAGAATCTTACAACCAAAGTAGATTTTATGAAGTTCAATAATGATGCTCAAATTTTAGCTATTTGTTCGAGCATGAAGAAGGACAGCTTAAAGTTGGTACATGTTCCATCATACACTGTATTTTCCAACTGGCCTCCTCAAAGGCAGGGCCTGCATTATCCTCGCTGTTTGGATTTTAGTCCCGGTGGAGGTTTCATGGCTGTGGGCAATGCTGCTGGAAAAGTGTTGTTGTACAAGTTGCATCATTACCATCATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000462 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0030686 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

517

Amino Acids

57.61

Weight (kDa)

5.43

Isoelectric Point (pI)

40.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_EML	PF23409	214 - 410	1.7e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19	PF24814	216 - 454	3.4e-20	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	216 - 383	1.1e-06	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	220 - 383	2.4e-09	WDHD1 first WD40 domain
WD40_Gbeta	PF25391	221 - 415	6.7e-07	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	222 - 378	1.6e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	263 - 512	1.9e-12	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	284 - 474	3.6e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	297 - 383	2.3e-08	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	303 - 383	6e-07	WDR3 first beta-propeller domain
WDR55	PF24796	310 - 454	1.2e-08	WDR55
Beta-prop_THOC3	PF25174	311 - 493	3e-18	THOC3 beta-propeller domain
WD40	PF00400	338 - 373	5.6e-06	WD domain, G-beta repeat
Beta-prop_EML_2	PF23414	360 - 455	2e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_EML_2	PF23414	393 - 512	7.9e-06	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0003242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14050
fragaria_vesca	FvH4_2g22480 FvH4_2g22480 FvH4_5g20520
malus_domestica	MD05G1205300.v1.1 MD05G1205400.v1.1 MD10G1192400.v1.1
prunus_persica	Prupe.5G054300_v2.0.a1 Prupe.5G054300_v2.0.a1 Prupe.8G231800_v2.0.a1
pyrus_communis	pycom05g19150 pycom12426g00550 pycom13g23680
rosa_chinensis	RchiOBHm_Chr6g0289431 RchiOBHm_Chr7g0205871 RchiOBHm_Chr7g0205881
rosa_laevigata	RLG00000012303
rosa_multiflora	Rmu_sc0000076.1_g000034 Rmu_sc0001527.1_g000035 Rmu_sc0004084.1_g000004
rosa_roxburghii	Rroxscaffold_3G00251900 Rroxscaffold_7G00179220
rosa_rugosa	Rorug06G0203300 Rorug06G0203400 Rorug07G0093600
rosa_samantha	Rh6AG314600 Rh6BG322100 Rh6CG328300 Rh6DG314000 Rh7AG225300 Rh7BG221200 Rh7CG238900 Rh7CG239300 Rh7CG239400 Rh7DG232000
rosa_wichuraiana	Rw6G027180 Rw7G019430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1245
AccB7I	CCANNNNNTGG	2 cut(s)	644, 1147
AccI	GTMKAC	1 cut(s)	144
AccII	CGCG	2 cut(s)	105, 959
AclWI	GGATC	4 cut(s)	714, 1125, 1194, 1207
AcsI	RAATTY	4 cut(s)	227, 349, 842, 1344
AfaI	GTAC	8 cut(s)	415, 449, 547, 952, 1174, 1186, 1392, 1526
AfiI	CCNNNNNNNGG	5 cut(s)	644, 899, 1068, 1147, 1481
AflIII	ACRYGT	1 cut(s)	1393
AgsI	TTSAA	5 cut(s)	602, 609, 758, 948, 1330
AjnI	CCWGG	5 cut(s)	147, 205, 409, 589, 894
Alw21I	GWGCWC	2 cut(s)	204, 1088
Alw26I	GTCTC	1 cut(s)	429
Alw44I	GTGCAC	1 cut(s)	200
AlwI	GGATC	4 cut(s)	714, 1125, 1194, 1207
AlwNI	CAGNNNCTG	1 cut(s)	1444
AoxI	GGCC	4 cut(s)	288, 1131, 1424, 1441
ApaLI	GTGCAC	1 cut(s)	200
ApeKI	GCWGC	5 cut(s)	586, 695, 794, 1211, 1505
ApoI	RAATTY	4 cut(s)	227, 349, 842, 1344
AseI	ATTAAT	2 cut(s)	297, 654
Asp700I	GAANNNNTTC	1 cut(s)	845
AspS9I	GGNCC	5 cut(s)	556, 647, 890, 1131, 1441
AsuC2I	CCSGG	1 cut(s)	1476
AsuHPI	GGTGA	1 cut(s)	59
AvaII	GGWCC	3 cut(s)	556, 647, 890
BaeGI	GKGCMC	2 cut(s)	204, 504
BamHI	GGATCC	1 cut(s)	1199
BanII	GRGCYC	2 cut(s)	391, 1088
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	2 cut(s)	204, 1088
BbvCI	CCTCAGC	1 cut(s)	329
BbvI	GCAGC	5 cut(s)	573, 682, 806, 1198, 1492
BccI	CCATC	8 cut(s)	44, 262, 728, 803, 1061, 1091, 1408, 1551
BcgI	CGANNNNNNTGC	2 cut(s)	1436, 1470
BciT130I	CCWGG	5 cut(s)	149, 207, 411, 591, 896
BciVI	GTATCC	1 cut(s)	235
BcnI	CCSGG	1 cut(s)	1476
BcoDI	GTCTC	1 cut(s)	429
BfaI	CTAG	1 cut(s)	306
BfmI	CTRYAG	2 cut(s)	141, 850
BfuI	GTATCC	1 cut(s)	235
BisI	GCNGC	5 cut(s)	587, 696, 795, 1212, 1506
BlpI	GCTNAGC	2 cut(s)	390, 399
BlsI	GCNGC	5 cut(s)	588, 697, 796, 1213, 1507
Bme1390I	CCNGG	6 cut(s)	149, 207, 411, 591, 896, 1476
Bme18I	GGWCC	3 cut(s)	556, 647, 890
BmgT120I	GGNCC	5 cut(s)	556, 647, 890, 1131, 1441
BmiI	GGNNCC	4 cut(s)	636, 892, 1132, 1201
BmrFI	CCNGG	6 cut(s)	149, 207, 411, 591, 896, 1476
BmsI	GCATC	4 cut(s)	211, 610, 1327, 1543
BpiI	GAAGAC	1 cut(s)	45
Bpu10I	CCTNAGC	1 cut(s)	329
Bpu1102I	GCTNAGC	2 cut(s)	390, 399
BpuEI	CTTGAG	1 cut(s)	1010
BpuMI	CCSGG	1 cut(s)	1476
BsaI	GGTCTC	1 cut(s)	429
BsaJI	CCNNGG	3 cut(s)	205, 505, 894
Bsc4I	CCNNNNNNNGG	5 cut(s)	644, 899, 1068, 1147, 1481
Bse1I	ACTGG	2 cut(s)	1111, 1427
Bse3DI	GCAATG	1 cut(s)	1507
BseBI	CCWGG	5 cut(s)	149, 207, 411, 591, 896
BseDI	CCNNGG	3 cut(s)	205, 505, 894
BseGI	GGATG	8 cut(s)	10, 87, 121, 133, 273, 277, 349, 625
BseLI	CCNNNNNNNGG	5 cut(s)	644, 899, 1068, 1147, 1481
BseMI	GCAATG	1 cut(s)	1507
BseMII	CTCAG	7 cut(s)	246, 320, 357, 404, 695, 830, 1112
BseNI	ACTGG	2 cut(s)	1111, 1427
BseRI	GAGGAG	1 cut(s)	1419
BseSI	GKGCMC	2 cut(s)	204, 504
BseXI	GCAGC	5 cut(s)	573, 682, 806, 1198, 1492
Bsh1236I	CGCG	2 cut(s)	105, 959
Bsh1285I	CGRYCG	1 cut(s)	957
BshFI	GGCC	4 cut(s)	290, 1133, 1426, 1443
BsiEI	CGRYCG	1 cut(s)	957
BsiHKAI	GWGCWC	2 cut(s)	204, 1088
BsiSI	CCGG	1 cut(s)	1476
BslFI	GGGAC	3 cut(s)	876, 1033, 1458
BslI	CCNNNNNNNGG	5 cut(s)	644, 899, 1068, 1147, 1481
BsmAI	GTCTC	1 cut(s)	429
BsmFI	GGGAC	3 cut(s)	876, 1033, 1458
BsnI	GGCC	4 cut(s)	290, 1133, 1426, 1443
Bso31I	GGTCTC	1 cut(s)	429
Bsp1286I	GDGCHC	4 cut(s)	204, 391, 504, 1088
Bsp1407I	TGTACA	2 cut(s)	1184, 1524
Bsp143I	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
Bsp1720I	GCTNAGC	2 cut(s)	390, 399
BspANI	GGCC	4 cut(s)	290, 1133, 1426, 1443
BspCNI	CTCAG	7 cut(s)	245, 321, 358, 403, 694, 829, 1113
BspFNI	CGCG	2 cut(s)	105, 959
BspHI	TCATGA	1 cut(s)	75
BspLI	GGNNCC	4 cut(s)	636, 892, 1132, 1201
BspPI	GGATC	4 cut(s)	714, 1125, 1194, 1207
BspTNI	GGTCTC	1 cut(s)	429
BsrDI	GCAATG	1 cut(s)	1507
BsrGI	TGTACA	2 cut(s)	1184, 1524
BsrI	ACTGG	2 cut(s)	1111, 1427
BssECI	CCNNGG	3 cut(s)	205, 505, 894
BssMI	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
Bst2UI	CCWGG	5 cut(s)	149, 207, 411, 591, 896
Bst4CI	ACNGT	5 cut(s)	185, 441, 1042, 1226, 1411
Bst6I	CTCTTC	5 cut(s)	231, 273, 333, 563, 903
BstAPI	GCANNNNNTGC	1 cut(s)	1444
BstAUI	TGTACA	2 cut(s)	1184, 1524
BstC8I	GCNNGC	4 cut(s)	103, 396, 1135, 1445
BstDSI	CCRYGG	1 cut(s)	505
BstF5I	GGATG	8 cut(s)	10, 87, 121, 133, 273, 277, 349, 625
BstFNI	CGCG	2 cut(s)	105, 959
BstKTI	GATC	6 cut(s)	75, 538, 709, 957, 1120, 1202
BstMAI	GTCTC	1 cut(s)	429
BstMBI	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
BstMCI	CGRYCG	1 cut(s)	957
BstMWI	GCNNNNNNNGC	3 cut(s)	395, 400, 1444
BstNI	CCWGG	5 cut(s)	149, 207, 411, 591, 896
BstNSI	RCATGY	2 cut(s)	398, 1397
BstSCI	CCNGG	6 cut(s)	147, 205, 409, 589, 894, 1474
BstSFI	CTRYAG	2 cut(s)	141, 850
BstSLI	GKGCMC	2 cut(s)	204, 504
BstUI	CGCG	2 cut(s)	105, 959
BstV1I	GCAGC	5 cut(s)	573, 682, 806, 1198, 1492
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	2 cut(s)	1117, 1199
BstYI	RGATCY	2 cut(s)	1117, 1199
BsuI	GTATCC	1 cut(s)	235
BsuRI	GGCC	4 cut(s)	290, 1133, 1426, 1443
BtgI	CCRYGG	1 cut(s)	505
BtsCI	GGATG	8 cut(s)	10, 87, 121, 133, 273, 277, 349, 625
BtsIMutI	CAGTG	3 cut(s)	1118, 1231, 1407
Cac8I	GCNNGC	4 cut(s)	103, 396, 1135, 1445
CaiI	CAGNNNCTG	1 cut(s)	1444
CciI	TCATGA	1 cut(s)	75
Cfr13I	GGNCC	5 cut(s)	556, 647, 890, 1131, 1441
CsiI	ACCWGGT	1 cut(s)	147
Csp6I	GTAC	8 cut(s)	414, 448, 546, 951, 1173, 1185, 1391, 1525
CspCI	CAANNNNNGTGG	2 cut(s)	597, 632
CviAII	CATG	7 cut(s)	76, 395, 639, 1366, 1394, 1489, 1547
CviQI	GTAC	8 cut(s)	414, 448, 546, 951, 1173, 1185, 1391, 1525
DpnI	GATC	6 cut(s)	74, 537, 708, 956, 1119, 1201
DpnII	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
Eam1104I	CTCTTC	5 cut(s)	231, 273, 333, 563, 903
EarI	CTCTTC	5 cut(s)	231, 273, 333, 563, 903
Ecl136II	GAGCTC	1 cut(s)	1086
Eco24I	GRGCYC	2 cut(s)	391, 1088
Eco31I	GGTCTC	1 cut(s)	429
Eco47I	GGWCC	3 cut(s)	556, 647, 890
Eco53kI	GAGCTC	1 cut(s)	1086
EcoICRI	GAGCTC	1 cut(s)	1086
EcoO109I	RGGNCCY	3 cut(s)	890, 1131, 1441
EcoRII	CCWGG	5 cut(s)	147, 205, 409, 589, 894
EcoT22I	ATGCAT	1 cut(s)	1552
EcoT38I	GRGCYC	2 cut(s)	391, 1088
FaeI	CATG	7 cut(s)	79, 398, 642, 1369, 1397, 1492, 1550
FalI	AAGNNNNNCTT	2 cut(s)	1364, 1396
FaqI	GGGAC	3 cut(s)	876, 1033, 1458
FatI	CATG	7 cut(s)	75, 394, 638, 1365, 1393, 1488, 1546
FblI	GTMKAC	1 cut(s)	144
Fnu4HI	GCNGC	5 cut(s)	587, 696, 795, 1212, 1506
FokI	GGATG	8 cut(s)	17, 94, 128, 140, 280, 284, 356, 632
FriOI	GRGCYC	2 cut(s)	391, 1088
Fsp4HI	GCNGC	5 cut(s)	587, 696, 795, 1212, 1506
FspBI	CTAG	1 cut(s)	306
GluI	GCNGC	5 cut(s)	587, 696, 795, 1212, 1506
HaeIII	GGCC	4 cut(s)	290, 1133, 1426, 1443
HapII	CCGG	1 cut(s)	1476
Hin1II	CATG	7 cut(s)	79, 398, 642, 1369, 1397, 1492, 1550
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HindIII	AAGCTT	1 cut(s)	916
HinfI	GANTC	6 cut(s)	59, 406, 434, 470, 944, 1297
HpaII	CCGG	1 cut(s)	1476
HphI	GGTGA	1 cut(s)	59
Hpy166II	GTNNAC	5 cut(s)	145, 181, 202, 556, 1108
Hpy188I	TCNGA	7 cut(s)	235, 367, 463, 478, 729, 1122, 1222
Hpy188III	TCNNGA	5 cut(s)	76, 599, 1027, 1285, 1294
Hpy8I	GTNNAC	5 cut(s)	145, 181, 202, 556, 1108
Hpy99I	CGWCG	1 cut(s)	110
HpyAV	CCTTC	9 cut(s)	27, 115, 328, 551, 784, 828, 968, 1151, 1366
HpyCH4III	ACNGT	5 cut(s)	185, 441, 1042, 1226, 1411
HpyF10VI	GCNNNNNNNGC	3 cut(s)	395, 400, 1444
Hsp92II	CATG	7 cut(s)	79, 398, 642, 1369, 1397, 1492, 1550
Kzo9I	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
LmnI	GCTCC	1 cut(s)	524
Lsp1109I	GCAGC	5 cut(s)	573, 682, 806, 1198, 1492
LweI	GCATC	4 cut(s)	211, 610, 1327, 1543
MabI	ACCWGGT	1 cut(s)	147
MaeI	CTAG	1 cut(s)	306
MalI	GATC	6 cut(s)	74, 537, 708, 956, 1119, 1201
MboI	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
MflI	RGATCY	2 cut(s)	1117, 1199
MhlI	GDGCHC	4 cut(s)	204, 391, 504, 1088
MmeI	TCCRAC	2 cut(s)	502, 1443
Mph1103I	ATGCAT	1 cut(s)	1552
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	6 cut(s)	297, 312, 383, 654, 1236, 1382
MslI	CAYNNNNRTG	3 cut(s)	80, 675, 1493
MspI	CCGG	1 cut(s)	1476
MspR9I	CCNGG	6 cut(s)	149, 207, 411, 591, 896, 1476
MvaI	CCWGG	5 cut(s)	149, 207, 411, 591, 896
MvnI	CGCG	2 cut(s)	105, 959
MwoI	GCNNNNNNNGC	3 cut(s)	395, 400, 1444
NciI	CCSGG	1 cut(s)	1476
NdeII	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
NlaIII	CATG	7 cut(s)	79, 398, 642, 1369, 1397, 1492, 1550
NlaIV	GGNNCC	4 cut(s)	636, 892, 1132, 1201
NsiI	ATGCAT	1 cut(s)	1552
NspI	RCATGY	2 cut(s)	398, 1397
PaeI	GCATGC	1 cut(s)	398
PagI	TCATGA	1 cut(s)	75
PciI	ACATGT	1 cut(s)	1393
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	6 cut(s)	59, 406, 434, 470, 944, 1297
PflFI	GACNNNGTC	1 cut(s)	149
PflMI	CCANNNNNTGG	2 cut(s)	644, 1147
PkrI	GCNGC	5 cut(s)	588, 697, 796, 1213, 1507
Ple19I	CGATCG	1 cut(s)	957
PpuMI	RGGWCCY	1 cut(s)	890
PscI	ACATGT	1 cut(s)	1393
PshBI	ATTAAT	2 cut(s)	297, 654
PsiI	TTATAA	1 cut(s)	1245
Psp124BI	GAGCTC	1 cut(s)	1088
Psp5II	RGGWCCY	1 cut(s)	890
Psp6I	CCWGG	5 cut(s)	147, 205, 409, 589, 894
PspGI	CCWGG	5 cut(s)	147, 205, 409, 589, 894
PspN4I	GGNNCC	4 cut(s)	636, 892, 1132, 1201
PspPI	GGNCC	5 cut(s)	556, 647, 890, 1131, 1441
PspPPI	RGGWCCY	1 cut(s)	890
PstNI	CAGNNNCTG	1 cut(s)	1444
PsuI	RGATCY	2 cut(s)	1117, 1199
PsyI	GACNNNGTC	1 cut(s)	149
PvuI	CGATCG	1 cut(s)	957
RsaI	GTAC	8 cut(s)	415, 449, 547, 952, 1174, 1186, 1392, 1526
RsaNI	GTAC	8 cut(s)	414, 448, 546, 951, 1173, 1185, 1391, 1525
RseI	CAYNNNNRTG	3 cut(s)	80, 675, 1493
SacI	GAGCTC	1 cut(s)	1088
SaqAI	TTAA	6 cut(s)	297, 312, 383, 654, 1236, 1382
SatI	GCNGC	5 cut(s)	587, 696, 795, 1212, 1506
Sau3AI	GATC	6 cut(s)	72, 535, 706, 954, 1117, 1199
Sau96I	GGNCC	5 cut(s)	556, 647, 890, 1131, 1441
ScrFI	CCNGG	6 cut(s)	149, 207, 411, 591, 896, 1476
SduI	GDGCHC	4 cut(s)	204, 391, 504, 1088
SexAI	ACCWGGT	1 cut(s)	147
SfaNI	GCATC	4 cut(s)	211, 610, 1327, 1543
SfcI	CTRYAG	2 cut(s)	141, 850
SinI	GGWCC	3 cut(s)	556, 647, 890
SmiMI	CAYNNNNRTG	3 cut(s)	80, 675, 1493
SmlI	CTYRAG	1 cut(s)	1025
SmoI	CTYRAG	1 cut(s)	1025
SphI	GCATGC	1 cut(s)	398
SspI	AATATT	2 cut(s)	605, 1240
SspMI	CTAG	1 cut(s)	306
SstI	GAGCTC	1 cut(s)	1088
StyD4I	CCNGG	6 cut(s)	147, 205, 409, 589, 894, 1474
TaaI	ACNGT	5 cut(s)	185, 441, 1042, 1226, 1411
TaqI	TCGA	5 cut(s)	153, 443, 709, 1293, 1361
TatI	WGTACW	2 cut(s)	1184, 1524
TfiI	GAWTC	6 cut(s)	59, 406, 434, 470, 944, 1297
Tru1I	TTAA	6 cut(s)	297, 312, 383, 654, 1236, 1382
Tru9I	TTAA	6 cut(s)	297, 312, 383, 654, 1236, 1382
TscAI	CASTG	3 cut(s)	1118, 1231, 1414
TseI	GCWGC	5 cut(s)	586, 695, 794, 1211, 1505
TspGWI	ACGGA	3 cut(s)	123, 757, 802
TspRI	CASTG	3 cut(s)	1118, 1231, 1414
Tth111I	GACNNNGTC	1 cut(s)	149
Van91I	CCANNNNNTGG	2 cut(s)	644, 1147
VneI	GTGCAC	1 cut(s)	200
VpaK11BI	GGWCC	3 cut(s)	556, 647, 890
VspI	ATTAAT	2 cut(s)	297, 654
XapI	RAATTY	4 cut(s)	227, 349, 842, 1344
XceI	RCATGY	2 cut(s)	398, 1397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	417
XmiI	GTMKAC	1 cut(s)	144
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	1 cut(s)	306
Zsp2I	ATGCAT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.