U3 small nucleolar RNA-associated protein 18 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14050 |
| fragaria_vesca | FvH4_2g22480 FvH4_2g22480 FvH4_5g20520 |
| malus_domestica | MD05G1205300.v1.1 MD05G1205400.v1.1 MD10G1192400.v1.1 |
| prunus_persica | Prupe.5G054300_v2.0.a1 Prupe.5G054300_v2.0.a1 Prupe.8G231800_v2.0.a1 |
| pyrus_communis | pycom05g19150 pycom12426g00550 pycom13g23680 |
| rosa_chinensis | RchiOBHm_Chr6g0289431 RchiOBHm_Chr7g0205871 RchiOBHm_Chr7g0205881 |
| rosa_laevigata | RLG00000012303 |
| rosa_multiflora | Rmu_sc0000076.1_g000034 Rmu_sc0001527.1_g000035 Rmu_sc0004084.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00251900 Rroxscaffold_7G00179220 |
| rosa_rugosa | Rorug06G0203300 Rorug06G0203400 Rorug07G0093600 |
| rosa_samantha | Rh6AG314600 Rh6BG322100 Rh6CG328300 Rh6DG314000 Rh7AG225300 Rh7BG221200 Rh7CG238900 Rh7CG239300 Rh7CG239400 Rh7DG232000 |
| rosa_wichuraiana | Rw6G027180 Rw7G019430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 150 |
| AcoI | YGGCCR | 1 cut(s) | 28 |
| AluBI | AGCT | 1 cut(s) | 202 |
| AluI | AGCT | 1 cut(s) | 202 |
| AoxI | GGCC | 1 cut(s) | 28 |
| AsuC2I | CCSGG | 1 cut(s) | 27 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BbsI | GAAGAC | 1 cut(s) | 90 |
| BccI | CCATC | 2 cut(s) | 40, 89 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcnI | CCSGG | 1 cut(s) | 27 |
| Bme1390I | CCNGG | 1 cut(s) | 27 |
| BmrFI | CCNGG | 1 cut(s) | 27 |
| BmsI | GCATC | 1 cut(s) | 40 |
| BpiI | GAAGAC | 1 cut(s) | 90 |
| BpuMI | CCSGG | 1 cut(s) | 27 |
| BseGI | GGATG | 4 cut(s) | 51, 55, 132, 166 |
| Bsh1236I | CGCG | 1 cut(s) | 150 |
| BshFI | GGCC | 1 cut(s) | 30 |
| BsiSI | CCGG | 1 cut(s) | 27 |
| BsnI | GGCC | 1 cut(s) | 30 |
| Bsp143I | GATC | 2 cut(s) | 117, 178 |
| BspANI | GGCC | 1 cut(s) | 30 |
| BspFNI | CGCG | 1 cut(s) | 150 |
| BspHI | TCATGA | 1 cut(s) | 120 |
| BssMI | GATC | 2 cut(s) | 117, 178 |
| BstC8I | GCNNGC | 1 cut(s) | 148 |
| BstDEI | CTNAG | 1 cut(s) | 39 |
| BstF5I | GGATG | 4 cut(s) | 51, 55, 132, 166 |
| BstFNI | CGCG | 1 cut(s) | 150 |
| BstKTI | GATC | 2 cut(s) | 120, 181 |
| BstMBI | GATC | 2 cut(s) | 117, 178 |
| BstSCI | CCNGG | 1 cut(s) | 25 |
| BstUI | CGCG | 1 cut(s) | 150 |
| BstV2I | GAAGAC | 1 cut(s) | 90 |
| BsuRI | GGCC | 1 cut(s) | 30 |
| BtsCI | GGATG | 4 cut(s) | 51, 55, 132, 166 |
| Cac8I | GCNNGC | 1 cut(s) | 148 |
| CciI | TCATGA | 1 cut(s) | 120 |
| CviAII | CATG | 1 cut(s) | 121 |
| CviJI | RGCY | 2 cut(s) | 30, 202 |
| CviKI_1 | RGCY | 2 cut(s) | 30, 202 |
| DdeI | CTNAG | 1 cut(s) | 39 |
| DpnI | GATC | 2 cut(s) | 119, 180 |
| DpnII | GATC | 2 cut(s) | 117, 178 |
| EaeI | YGGCCR | 1 cut(s) | 28 |
| FaeI | CATG | 1 cut(s) | 124 |
| FaiI | YATR | 1 cut(s) | 122 |
| FatI | CATG | 1 cut(s) | 120 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| FokI | GGATG | 4 cut(s) | 58, 62, 139, 173 |
| HaeIII | GGCC | 1 cut(s) | 30 |
| HapII | CCGG | 1 cut(s) | 27 |
| Hin1II | CATG | 1 cut(s) | 124 |
| HinfI | GANTC | 1 cut(s) | 104 |
| HpaII | CCGG | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy188III | TCNNGA | 2 cut(s) | 121, 182 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyAV | CCTTC | 2 cut(s) | 72, 160 |
| HpyCH4V | TGCA | 1 cut(s) | 73 |
| HpyF3I | CTNAG | 1 cut(s) | 39 |
| Hsp92II | CATG | 1 cut(s) | 124 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 2 cut(s) | 117, 178 |
| LpnPI | CCDG | 2 cut(s) | 40, 188 |
| LweI | GCATC | 1 cut(s) | 40 |
| MalI | GATC | 2 cut(s) | 119, 180 |
| MboI | GATC | 2 cut(s) | 117, 178 |
| MboII | GAAGA | 2 cut(s) | 95, 208 |
| MluCI | AATT | 1 cut(s) | 109 |
| MnlI | CCTC | 3 cut(s) | 36, 117, 151 |
| MseI | TTAA | 1 cut(s) | 8 |
| MslI | CAYNNNNRTG | 1 cut(s) | 125 |
| MspI | CCGG | 1 cut(s) | 27 |
| MspR9I | CCNGG | 1 cut(s) | 27 |
| MvnI | CGCG | 1 cut(s) | 150 |
| NciI | CCSGG | 1 cut(s) | 27 |
| NdeII | GATC | 2 cut(s) | 117, 178 |
| NlaIII | CATG | 1 cut(s) | 124 |
| PagI | TCATGA | 1 cut(s) | 120 |
| PfeI | GAWTC | 1 cut(s) | 104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 125 |
| SaqAI | TTAA | 1 cut(s) | 8 |
| Sau3AI | GATC | 2 cut(s) | 117, 178 |
| ScrFI | CCNGG | 1 cut(s) | 27 |
| SetI | ASST | 3 cut(s) | 64, 171, 204 |
| SfaNI | GCATC | 1 cut(s) | 40 |
| SgeI | CNNG | 9 cut(s) | 38, 39, 46, 86, 133, 159, 161, 194, 215 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 125 |
| Sse9I | AATT | 1 cut(s) | 109 |
| StyD4I | CCNGG | 1 cut(s) | 25 |
| TasI | AATT | 1 cut(s) | 109 |
| TfiI | GAWTC | 1 cut(s) | 104 |
| Tru1I | TTAA | 1 cut(s) | 8 |
| Tru9I | TTAA | 1 cut(s) | 8 |
| TspDTI | ATGAA | 3 cut(s) | 54, 72, 96 |
| TspGWI | ACGGA | 1 cut(s) | 168 |