MD05G1253100.v1.1

Phosphatase IMPL1

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
38437084 .. 38441869
4786 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1253100.v1.1.491

Sequence Viewer

Length: 1122 bp
ATGGGCAGGTCCCTGGTTTTCTCCACAAACGTTCCTCTCAGAATTTCTCAAATACCCAGATCAATTTTACCTCCCAATCGACCAAGTTACTCACTTTTTCTGAATCCAAAGCAAAAATTGCAACATGGGTTTCAAAGATTTGGACTTTCGATTGCCAAACCGACGAGAAGTCTCTGCACAAAGGCCGTGTTGTCTGGAATTCCAAACCACGAGCTGTATGTGAAAGTTGGCGCCAAATCAACCGGACCAATTCCAATTGGTCAGCTCGTTGGAGTGGTTGAGAAGGCCGCTAAGACTGGCGCTGAGGTTGTGATGAATGCTGTTAATAAGCCTCGGAATATCACCTATAAAGGAGTAGCGGACTTGGTCACTGACACAGATAAAAAGAGTGAAGCCACAATTTTAGAAGTTGTGAGAAAGAACTTTGAAGATCACCTTATTCTTGGAGAGGAGGGTGGAATAACTGGAGATGCATCATCTGATTATATGTGGTGCATTGATCCTTTAGATGGAACAACAAATTTCGCACATGGTTATCCTAGCTTTGCAGTTTCTGTTGGAGTTTTATTTCGAGGAAAACCTGTTGCTGCTGCCGTGGTAGAGTTCGTTGGGGGCCCTATGTGTTGGAATACCCGCATTTTTTCTGCTAGTGCTGGAGGGGGAGCATTTTGTAATGGCCAAAAAATTCACGTGAGCCAAACTGATGAGGTGGGACGATCTCTTCTTGTTACTGGATTTGGTTATGAACATGATGACGTATGGATCACCAACATAGAGTTATTTAAAGAGTTCACCGACGTCAGCAGGGGTGTTAGAAGGCTCGGTGCAGCTTCAGTAGACATGTGCCATGTAGCTCTTGGGATTGTAGAAGCTTACTGGGAATATCGACTAAAGCCGTGGGATATGGCAGCTGGTGTTTTGATAGTTGAAGAGGCTGGAGGAAAGGTTACGTGCATGGATGGCGGAAAATTTTCTGTATTTGATAGATCTGTCTTGGTATCCAATGGTGTGCTGCATGGCAAGGTTTTAGAGAGGATTGCACCTGCAACAGAGAAGTTGAAGAGCAAAGAAATTGATTTCTCATTGTGGTACAAGCCCGAAGATTACACAACAGACATTTGA

Protein Analysis

374

Amino Acids

40.6

Weight (kDa)

7.63

Isoelectric Point (pI)

26.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 93 - 351 1.2e-74 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1051
AatII GACGTC 1 cut(s) 801
Acc36I ACCTGC 1 cut(s) 1051
AccB1I GGYRCC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 837
AciI CCGC 4 cut(s) 288, 359, 634, 963
AclI AACGTT 1 cut(s) 30
AclWI GGATC 2 cut(s) 494, 770
AcoI YGGCCR 1 cut(s) 676
AcsI RAATTY 5 cut(s) 42, 198, 520, 684, 968
AcuI CTGAAG 1 cut(s) 816
AcvI CACGTG 1 cut(s) 691
AcyI GRCGYC 2 cut(s) 231, 798
AfaI GTAC 1 cut(s) 1091
AfiI CCNNNNNNNGG 1 cut(s) 509
AflIII ACRYGT 1 cut(s) 840
AgsI TTSAA 4 cut(s) 134, 428, 929, 1060
AhdI GACNNNNNGTC 1 cut(s) 168
AjnI CCWGG 1 cut(s) 12
AluBI AGCT 7 cut(s) 214, 265, 543, 830, 854, 872, 911
AluI AGCT 7 cut(s) 214, 265, 543, 830, 854, 872, 911
Alw26I GTCTC 1 cut(s) 176
AlwI GGATC 2 cut(s) 494, 770
AlwNI CAGNNNCTG 1 cut(s) 554
AoxI GGCC 4 cut(s) 183, 285, 613, 676
ApaI GGGCCC 1 cut(s) 617
ApeKI GCWGC 5 cut(s) 587, 590, 827, 908, 1012
ApoI RAATTY 5 cut(s) 42, 198, 520, 684, 968
Asp700I GAANNNNTTC 1 cut(s) 970
AspLEI GCGC 2 cut(s) 233, 302
AspS9I GGNCC 4 cut(s) 9, 245, 613, 614
AsuHPI GGTGA 4 cut(s) 334, 425, 757, 784
AvaII GGWCC 2 cut(s) 9, 245
BaeGI GKGCMC 1 cut(s) 617
BalI TGGCCA 1 cut(s) 678
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 617
BauI CACGAG 1 cut(s) 209
BbrPI CACGTG 1 cut(s) 691
BbvCI CCTCAGC 1 cut(s) 303
BbvI GCAGC 5 cut(s) 574, 577, 839, 920, 999
BccI CCATC 2 cut(s) 503, 953
BceAI ACGGC 3 cut(s) 170, 578, 880
BciT130I CCWGG 1 cut(s) 14
BciVI GTATCC 1 cut(s) 1009
BcoDI GTCTC 1 cut(s) 176
BfaI CTAG 2 cut(s) 540, 648
BfoI RGCGCY 2 cut(s) 234, 303
BfuAI ACCTGC 1 cut(s) 1051
BfuI GTATCC 1 cut(s) 1009
BglII AGATCT 1 cut(s) 986
BisI GCNGC 6 cut(s) 288, 588, 591, 828, 909, 1013
BlsI GCNGC 6 cut(s) 289, 589, 592, 829, 910, 1014
Bme1390I CCNGG 1 cut(s) 14
Bme18I GGWCC 2 cut(s) 9, 245
BmeRI GACNNNNNGTC 1 cut(s) 168
BmgT120I GGNCC 4 cut(s) 9, 245, 613, 614
BmiI GGNNCC 4 cut(s) 11, 232, 614, 615
BmrFI CCNGG 1 cut(s) 14
BmrI ACTGGG 1 cut(s) 886
BmsI GCATC 2 cut(s) 460, 482
BmuI ACTGGG 1 cut(s) 886
BpmI CTGGAG 3 cut(s) 486, 675, 957
Bpu10I CCTNAGC 1 cut(s) 303
BsaAI YACGTR 2 cut(s) 691, 951
BsaHI GRCGYC 2 cut(s) 231, 798
BsaJI CCNNGG 4 cut(s) 12, 332, 594, 896
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 2 cut(s) 930, 960
Bsc4I CCNNNNNNNGG 1 cut(s) 509
Bse1I ACTGG 4 cut(s) 301, 469, 736, 881
BseBI CCWGG 1 cut(s) 14
BseDI CCNNGG 4 cut(s) 12, 332, 594, 896
BseGI GGATG 1 cut(s) 964
BseLI CCNNNNNNNGG 1 cut(s) 509
BseMII CTCAG 2 cut(s) 52, 294
BseNI ACTGG 4 cut(s) 301, 469, 736, 881
BseRI GAGGAG 1 cut(s) 464
BseSI GKGCMC 1 cut(s) 617
BseXI GCAGC 5 cut(s) 574, 577, 839, 920, 999
BsgI GTGCAG 2 cut(s) 160, 846
BshFI GGCC 4 cut(s) 185, 287, 615, 678
BshNI GGYRCC 1 cut(s) 230
BsiSI CCGG 1 cut(s) 243
BslFI GGGAC 1 cut(s) 726
BslI CCNNNNNNNGG 1 cut(s) 509
BsmAI GTCTC 1 cut(s) 176
BsmFI GGGAC 1 cut(s) 726
BsmI GAATGC 1 cut(s) 322
BsnI GGCC 4 cut(s) 185, 287, 615, 678
Bsp120I GGGCCC 1 cut(s) 613
Bsp1286I GDGCHC 1 cut(s) 617
Bsp143I GATC 6 cut(s) 59, 430, 499, 716, 762, 986
BspACI CCGC 4 cut(s) 288, 359, 634, 963
BspANI GGCC 4 cut(s) 185, 287, 615, 678
BspCNI CTCAG 2 cut(s) 51, 295
BspLI GGNNCC 4 cut(s) 11, 232, 614, 615
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 2 cut(s) 494, 770
BspQI GCTCTTC 1 cut(s) 1055
BspT107I GGYRCC 1 cut(s) 230
BsrI ACTGG 4 cut(s) 301, 469, 736, 881
BssECI CCNNGG 4 cut(s) 12, 332, 594, 896
BssMI GATC 6 cut(s) 59, 430, 499, 716, 762, 986
BssNI GRCGYC 2 cut(s) 231, 798
BssSI CACGAG 1 cut(s) 209
Bst2BI CACGAG 1 cut(s) 209
Bst2UI CCWGG 1 cut(s) 14
Bst6I CTCTTC 3 cut(s) 726, 924, 1055
BstACI GRCGYC 2 cut(s) 231, 798
BstAPI GCANNNNNTGC 1 cut(s) 118
BstBAI YACGTR 2 cut(s) 691, 951
BstDEI CTNAG 3 cut(s) 38, 291, 303
BstDSI CCRYGG 2 cut(s) 594, 896
BstF5I GGATG 1 cut(s) 964
BstH2I RGCGCY 2 cut(s) 234, 303
BstHHI GCGC 2 cut(s) 233, 302
BstKTI GATC 6 cut(s) 62, 433, 502, 719, 765, 989
BstMAI GTCTC 1 cut(s) 176
BstMBI GATC 6 cut(s) 59, 430, 499, 716, 762, 986
BstMWI GCNNNNNNNGC 2 cut(s) 118, 960
BstNI CCWGG 1 cut(s) 14
BstNSI RCATGY 1 cut(s) 844
BstSCI CCNGG 1 cut(s) 12
BstSLI GKGCMC 1 cut(s) 617
BstV1I GCAGC 5 cut(s) 574, 577, 839, 920, 999
BstX2I RGATCY 1 cut(s) 986
BstYI RGATCY 1 cut(s) 986
BsuI GTATCC 1 cut(s) 1009
BsuRI GGCC 4 cut(s) 185, 287, 615, 678
BtgI CCRYGG 2 cut(s) 594, 896
BtsCI GGATG 1 cut(s) 964
BtsIMutI CAGTG 1 cut(s) 369
BveI ACCTGC 1 cut(s) 1051
CaiI CAGNNNCTG 1 cut(s) 554
CfoI GCGC 2 cut(s) 233, 302
Cfr13I GGNCC 4 cut(s) 9, 245, 613, 614
Csp6I GTAC 1 cut(s) 1090
CviAII CATG 7 cut(s) 125, 530, 749, 841, 848, 955, 1016
CviQI GTAC 1 cut(s) 1090
DdeI CTNAG 3 cut(s) 38, 291, 303
DinI GGCGCC 1 cut(s) 232
DpnI GATC 6 cut(s) 61, 432, 501, 718, 764, 988
DpnII GATC 6 cut(s) 59, 430, 499, 716, 762, 986
DraI TTTAAA 1 cut(s) 784
DriI GACNNNNNGTC 1 cut(s) 168
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 3 cut(s) 726, 924, 1055
Eam1105I GACNNNNNGTC 1 cut(s) 168
EarI CTCTTC 3 cut(s) 726, 924, 1055
EciI GGCGGA 1 cut(s) 978
Eco24I GRGCYC 1 cut(s) 617
Eco47I GGWCC 2 cut(s) 9, 245
Eco57I CTGAAG 1 cut(s) 816
Eco72I CACGTG 1 cut(s) 691
EcoO109I RGGNCCY 3 cut(s) 9, 613, 614
EcoRI GAATTC 1 cut(s) 198
EcoRII CCWGG 1 cut(s) 12
EcoT22I ATGCAT 1 cut(s) 475
EcoT38I GRGCYC 1 cut(s) 617
EgeI GGCGCC 1 cut(s) 232
EheI GGCGCC 1 cut(s) 232
FaeI CATG 7 cut(s) 128, 533, 752, 844, 851, 958, 1019
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FaqI GGGAC 1 cut(s) 726
FatI CATG 7 cut(s) 124, 529, 748, 840, 847, 954, 1015
FauI CCCGC 1 cut(s) 641
FblI GTMKAC 1 cut(s) 837
Fnu4HI GCNGC 6 cut(s) 288, 588, 591, 828, 909, 1013
FokI GGATG 1 cut(s) 971
FriOI GRGCYC 1 cut(s) 617
Fsp4HI GCNGC 6 cut(s) 288, 588, 591, 828, 909, 1013
FspBI CTAG 2 cut(s) 540, 648
GlaI GCGC 2 cut(s) 232, 301
GluI GCNGC 6 cut(s) 288, 588, 591, 828, 909, 1013
GsuI CTGGAG 3 cut(s) 486, 675, 957
HaeII RGCGCY 2 cut(s) 234, 303
HaeIII GGCC 4 cut(s) 185, 287, 615, 678
HapII CCGG 1 cut(s) 243
HhaI GCGC 2 cut(s) 233, 302
Hin1I GRCGYC 2 cut(s) 231, 798
Hin1II CATG 7 cut(s) 128, 533, 752, 844, 851, 958, 1019
Hin6I GCGC 2 cut(s) 231, 300
HinP1I GCGC 2 cut(s) 231, 300
HindIII AAGCTT 1 cut(s) 870
HinfI GANTC 1 cut(s) 103
HpaII CCGG 1 cut(s) 243
HphI GGTGA 4 cut(s) 334, 425, 757, 784
Hpy166II GTNNAC 2 cut(s) 792, 838
Hpy188I TCNGA 4 cut(s) 41, 102, 336, 481
Hpy188III TCNNGA 1 cut(s) 195
Hpy8I GTNNAC 2 cut(s) 792, 838
Hpy99I CGWCG 2 cut(s) 166, 800
HpyAV CCTTC 2 cut(s) 277, 810
HpyCH4IV ACGT 5 cut(s) 30, 690, 756, 798, 950
HpyF10VI GCNNNNNNNGC 2 cut(s) 118, 960
HpyF3I CTNAG 3 cut(s) 38, 291, 303
HpySE526I ACGT 5 cut(s) 30, 690, 756, 798, 950
Hsp92I GRCGYC 2 cut(s) 231, 798
Hsp92II CATG 7 cut(s) 128, 533, 752, 844, 851, 958, 1019
HspAI GCGC 2 cut(s) 231, 300
KasI GGCGCC 1 cut(s) 230
Kzo9I GATC 6 cut(s) 59, 430, 499, 716, 762, 986
LguI GCTCTTC 1 cut(s) 1055
LmnI GCTCC 1 cut(s) 662
Lsp1109I GCAGC 5 cut(s) 574, 577, 839, 920, 999
LweI GCATC 2 cut(s) 460, 482
MaeI CTAG 2 cut(s) 540, 648
MaeII ACGT 5 cut(s) 30, 690, 756, 798, 950
MaeIII GTNAC 4 cut(s) 86, 367, 727, 946
MalI GATC 6 cut(s) 61, 432, 501, 718, 764, 988
MboI GATC 6 cut(s) 59, 430, 499, 716, 762, 986
MboII GAAGA 5 cut(s) 440, 713, 941, 1072, 1112
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 1 cut(s) 986
MhlI GDGCHC 1 cut(s) 617
MlsI TGGCCA 1 cut(s) 678
MluNI TGGCCA 1 cut(s) 678
Mly113I GGCGCC 1 cut(s) 231
MmeI TCCRAC 3 cut(s) 250, 538, 605
Mox20I TGGCCA 1 cut(s) 678
Mph1103I ATGCAT 1 cut(s) 475
MroXI GAANNNNTTC 1 cut(s) 970
MscI TGGCCA 1 cut(s) 678
MseI TTAA 2 cut(s) 324, 783
Msp20I TGGCCA 1 cut(s) 678
MspA1I CMGCKG 1 cut(s) 911
MspI CCGG 1 cut(s) 243
MspR9I CCNGG 1 cut(s) 14
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 1 cut(s) 322
MvaI CCWGG 1 cut(s) 14
MwoI GCNNNNNNNGC 2 cut(s) 118, 960
NarI GGCGCC 1 cut(s) 231
NdeII GATC 6 cut(s) 59, 430, 499, 716, 762, 986
NlaIII CATG 7 cut(s) 128, 533, 752, 844, 851, 958, 1019
NlaIV GGNNCC 4 cut(s) 11, 232, 614, 615
NmuCI GTSAC 1 cut(s) 367
NsiI ATGCAT 1 cut(s) 475
NspI RCATGY 1 cut(s) 844
PaqCI CACCTGC 1 cut(s) 1051
PciI ACATGT 1 cut(s) 840
PciSI GCTCTTC 1 cut(s) 1055
PctI GAATGC 1 cut(s) 322
PdmI GAANNNNTTC 1 cut(s) 970
PfeI GAWTC 1 cut(s) 103
PflFI GACNNNGTC 1 cut(s) 365
PkrI GCNGC 6 cut(s) 289, 589, 592, 829, 910, 1014
PluTI GGCGCC 1 cut(s) 234
PmaCI CACGTG 1 cut(s) 691
PmlI CACGTG 1 cut(s) 691
Ppu21I YACGTR 2 cut(s) 691, 951
PpuMI RGGWCCY 1 cut(s) 9
PscI ACATGT 1 cut(s) 840
Psp1406I AACGTT 1 cut(s) 30
Psp5II RGGWCCY 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 12
PspCI CACGTG 1 cut(s) 691
PspGI CCWGG 1 cut(s) 12
PspN4I GGNNCC 4 cut(s) 11, 232, 614, 615
PspOMI GGGCCC 1 cut(s) 613
PspPI GGNCC 4 cut(s) 9, 245, 613, 614
PspPPI RGGWCCY 1 cut(s) 9
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 1 cut(s) 986
PsyI GACNNNGTC 1 cut(s) 365
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 1 cut(s) 1091
RsaNI GTAC 1 cut(s) 1090
SapI GCTCTTC 1 cut(s) 1055
SaqAI TTAA 2 cut(s) 324, 783
SatI GCNGC 6 cut(s) 288, 588, 591, 828, 909, 1013
Sau3AI GATC 6 cut(s) 59, 430, 499, 716, 762, 986
Sau96I GGNCC 4 cut(s) 9, 245, 613, 614
ScrFI CCNGG 1 cut(s) 14
SduI GDGCHC 1 cut(s) 617
SfaNI GCATC 2 cut(s) 460, 482
SfoI GGCGCC 1 cut(s) 232
SinI GGWCC 2 cut(s) 9, 245
SsiI CCGC 4 cut(s) 288, 359, 634, 963
SspDI GGCGCC 1 cut(s) 230
SspMI CTAG 2 cut(s) 540, 648
StyD4I CCNGG 1 cut(s) 12
TaiI ACGT 5 cut(s) 33, 693, 759, 801, 953
TaqI TCGA 4 cut(s) 79, 149, 571, 886
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 1 cut(s) 103
Tru1I TTAA 2 cut(s) 324, 783
Tru9I TTAA 2 cut(s) 324, 783
TscAI CASTG 1 cut(s) 376
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 5 cut(s) 587, 590, 827, 908, 1012
Tsp45I GTSAC 1 cut(s) 367
TspDTI ATGAA 2 cut(s) 329, 759
TspRI CASTG 1 cut(s) 376
Tth111I GACNNNGTC 1 cut(s) 365
VpaK11BI GGWCC 2 cut(s) 9, 245
XapI RAATTY 5 cut(s) 42, 198, 520, 684, 968
XceI RCATGY 1 cut(s) 844
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XmiI GTMKAC 1 cut(s) 837
XmnI GAANNNNTTC 1 cut(s) 970
XspI CTAG 2 cut(s) 540, 648
ZraI GACGTC 1 cut(s) 799
Zsp2I ATGCAT 1 cut(s) 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.