Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002951

Physical Location & Seq

Genomic Coordinates Forward (+)

47158811 .. 47162488

Gene Structure 3678 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1355100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGGGCAGGTCCCTGATTTTCTCCCCAAACCTTCCTCTCAGAATTTCTCAAATACCAAGATCAAATTTACCGCCCAATCGACCAGATTACTCACTTTTACTGAATTCAAAGCAAAAATTGCAACATGGGCTTCAAAGATTTGGACTTTCGATTGCCAAACCGACGAGAAGTCTCTGCACAAAGGCTGTGTTCTCTGAAATTCCAAACCCGGAGCTGTATGTGAAAGTTGGGGCCAAATCAACTGGACCAATTCCAATTGGTCAGCTCGTTGGAGTGGTAGAGAAGGCCGCTAAGACTGGCGCTGAGGTTGTGATGGATGCTGTTAATAAGCCTCGGGATATCACCTATAAAGGACTAACAGACTTGGTCACTAATATAGATGGAACAACAAATTTTGCACATGGTTATTCTAGCTTTGCAGTTTCTGTTGGAGTTTTATTTCGAGGAAGACCTGTTGCTGCTGCAGTGAGTTCGTTGGGGGCCCTGTGTTGGAATACCCGCATTTTTTCTGCTAGTGCTTGCTCATACTCTTCCATATTTGAGGTGGGACGATCTCTTCTTGTTACTGGATTTGGTTATGAACAAGATGATGTGTGGATCACCAACATAGAGTTATTTAAAGAGTTCACCTACATCAGAAGGGGTGTAAGCAGGCTCAGTGCAGCTGCGGTAGACATGTGCCATGTAGCTCTTTGGATTGTAGAAGCCCACTGGGAATATCGACTAAAGCCATGGGATACAGCAGCTGGTGTTTTGAATCGTGGCATCCAGAAGTGTGATTTAAAGAATTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006020 GO:0006066 GO:0006793 GO:0006796 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008934 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0023052 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046164 GO:0046174 GO:0046434 GO:0046838 GO:0046855 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052745 GO:0052834 GO:0065007 GO:0071545 GO:0071704 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00521 ko00562 ko01100 ko04070 map00521 map00562 map01100 map04070

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

265

Amino Acids

28.94

Weight (kDa)

9.49

Isoelectric Point (pI)

31.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	126 - 252	4.2e-19	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31190
fragaria_vesca	FvH4_3g12170 FvH4_3g12170 FvH4_3g12170 FvH4_3g12170
malus_domestica	MD05G1253100.v1.1 MD05G1253300.v1.1 MD05G1355100.v1.1 MD05G1355200.v1.1 MD10G1234100.v1.1 MD10G1234300.v1.1
prunus_persica	Prupe.4G110600_v2.0.a1 Prupe.4G110600_v2.0.a1 Prupe.4G110600_v2.0.a1 Prupe.4G110600_v2.0.a1 Prupe.4G110600_v2.0.a1 Prupe.4G110600_v2.0.a1
pyrus_communis	pycom05g23120 pycom05g23130 pycom05g23170 pycom05g23190 pycom10g19630
rosa_chinensis	RchiOBHm_Chr5g0019951 RchiOBHm_Chr5g0019961
rosa_laevigata	RLG00000032489
rosa_multiflora	Rmu_sc0023185.1_g000003 Rmu_sc0040606.1_g000001 Rmu_sc0040607.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058230
rosa_rugosa	Rorug05G0055700 Rorug05G0055800
rosa_samantha	Rh1BG130200 Rh5AG145700 Rh5BG145200 Rh5CG156800 Rh5DG144400 Rh5DG144600
rosa_wichuraiana	Rw5G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	672
AciI	CCGC	4 cut(s)	71, 288, 499, 668
AclWI	GGATC	1 cut(s)	605
AcsI	RAATTY	6 cut(s)	42, 64, 103, 198, 391, 787
AfiI	CCNNNNNNNGG	1 cut(s)	489
AflIII	ACRYGT	1 cut(s)	675
AgsI	TTSAA	3 cut(s)	108, 134, 757
AhdI	GACNNNNNGTC	1 cut(s)	168
AluBI	AGCT	6 cut(s)	214, 265, 414, 665, 689, 746
AluI	AGCT	6 cut(s)	214, 265, 414, 665, 689, 746
Alw26I	GTCTC	1 cut(s)	176
AlwI	GGATC	1 cut(s)	605
AlwNI	CAGNNNCTG	2 cut(s)	425, 746
Ama87I	CYCGRG	1 cut(s)	333
AoxI	GGCC	3 cut(s)	231, 285, 480
ApaI	GGGCCC	1 cut(s)	484
ApeKI	GCWGC	5 cut(s)	458, 461, 662, 665, 743
ApoI	RAATTY	6 cut(s)	42, 64, 103, 198, 391, 787
AspLEI	GCGC	1 cut(s)	302
AspS9I	GGNCC	5 cut(s)	9, 231, 245, 480, 481
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	3 cut(s)	334, 592, 619
AvaI	CYCGRG	1 cut(s)	333
AvaII	GGWCC	2 cut(s)	9, 245
BaeGI	GKGCMC	1 cut(s)	484
BanII	GRGCYC	1 cut(s)	484
BbsI	GAAGAC	1 cut(s)	454
BbvCI	CCTCAGC	1 cut(s)	303
BbvI	GCAGC	5 cut(s)	445, 448, 652, 674, 755
BccI	CCATC	2 cut(s)	307, 374
BcgI	CGANNNNNNTGC	2 cut(s)	453, 487
BciVI	GTATCC	1 cut(s)	730
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	1 cut(s)	176
BfaI	CTAG	2 cut(s)	411, 513
BfmI	CTRYAG	1 cut(s)	462
BfoI	RGCGCY	1 cut(s)	303
BfuI	GTATCC	1 cut(s)	730
BisI	GCNGC	6 cut(s)	288, 459, 462, 663, 666, 744
BlsI	GCNGC	6 cut(s)	289, 460, 463, 664, 667, 745
Bme1390I	CCNGG	1 cut(s)	209
Bme18I	GGWCC	2 cut(s)	9, 245
BmeRI	GACNNNNNGTC	1 cut(s)	168
BmeT110I	CYCGRG	1 cut(s)	333
BmgT120I	GGNCC	5 cut(s)	9, 231, 245, 480, 481
BmiI	GGNNCC	4 cut(s)	11, 232, 481, 482
BmrFI	CCNGG	1 cut(s)	209
BmrI	ACTGGG	1 cut(s)	721
BmsI	GCATC	2 cut(s)	307, 774
BmuI	ACTGGG	1 cut(s)	721
BpiI	GAAGAC	1 cut(s)	454
Bpu10I	CCTNAGC	1 cut(s)	303
BpuMI	CCSGG	1 cut(s)	209
BsaJI	CCNNGG	2 cut(s)	332, 731
Bsc4I	CCNNNNNNNGG	1 cut(s)	489
Bse1I	ACTGG	4 cut(s)	247, 301, 571, 716
BseDI	CCNNGG	2 cut(s)	332, 731
BseGI	GGATG	2 cut(s)	322, 765
BseLI	CCNNNNNNNGG	1 cut(s)	489
BseMII	CTCAG	3 cut(s)	52, 294, 670
BseNI	ACTGG	4 cut(s)	247, 301, 571, 716
BseSI	GKGCMC	1 cut(s)	484
BseXI	GCAGC	5 cut(s)	445, 448, 652, 674, 755
BsgI	GTGCAG	2 cut(s)	160, 681
BshFI	GGCC	3 cut(s)	233, 287, 482
BsiHKCI	CYCGRG	1 cut(s)	333
BsiSI	CCGG	1 cut(s)	209
BslFI	GGGAC	1 cut(s)	561
BslI	CCNNNNNNNGG	1 cut(s)	489
BsmAI	GTCTC	1 cut(s)	176
BsmFI	GGGAC	1 cut(s)	561
BsnI	GGCC	3 cut(s)	233, 287, 482
BsoBI	CYCGRG	1 cut(s)	333
Bsp120I	GGGCCC	1 cut(s)	480
Bsp1286I	GDGCHC	1 cut(s)	484
Bsp143I	GATC	3 cut(s)	59, 551, 597
Bsp19I	CCATGG	1 cut(s)	731
BspACI	CCGC	4 cut(s)	71, 288, 499, 668
BspANI	GGCC	3 cut(s)	233, 287, 482
BspCNI	CTCAG	3 cut(s)	51, 295, 669
BspLI	GGNNCC	4 cut(s)	11, 232, 481, 482
BspMAI	CTGCAG	1 cut(s)	466
BspPI	GGATC	1 cut(s)	605
BsrI	ACTGG	4 cut(s)	247, 301, 571, 716
BssECI	CCNNGG	2 cut(s)	332, 731
BssMI	GATC	3 cut(s)	59, 551, 597
BssT1I	CCWWGG	1 cut(s)	731
Bst6I	CTCTTC	2 cut(s)	535, 561
BstAPI	GCANNNNNTGC	1 cut(s)	118
BstC8I	GCNNGC	2 cut(s)	520, 653
BstDEI	CTNAG	4 cut(s)	38, 291, 303, 656
BstDSI	CCRYGG	1 cut(s)	731
BstF5I	GGATG	2 cut(s)	322, 765
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	1 cut(s)	302
BstKTI	GATC	3 cut(s)	62, 554, 600
BstMAI	GTCTC	1 cut(s)	176
BstMBI	GATC	3 cut(s)	59, 551, 597
BstMWI	GCNNNNNNNGC	2 cut(s)	118, 127
BstNSI	RCATGY	1 cut(s)	679
BstSCI	CCNGG	1 cut(s)	207
BstSFI	CTRYAG	1 cut(s)	462
BstSLI	GKGCMC	1 cut(s)	484
BstV1I	GCAGC	5 cut(s)	445, 448, 652, 674, 755
BstV2I	GAAGAC	1 cut(s)	454
BsuI	GTATCC	1 cut(s)	730
BsuRI	GGCC	3 cut(s)	233, 287, 482
BtgI	CCRYGG	1 cut(s)	731
BtsCI	GGATG	2 cut(s)	322, 765
BtsI	GCAGTG	1 cut(s)	471
BtsIMutI	CAGTG	3 cut(s)	471, 664, 709
Cac8I	GCNNGC	2 cut(s)	520, 653
CaiI	CAGNNNCTG	2 cut(s)	425, 746
CfoI	GCGC	1 cut(s)	302
Cfr13I	GGNCC	5 cut(s)	9, 231, 245, 480, 481
CviAII	CATG	5 cut(s)	125, 401, 676, 683, 732
DdeI	CTNAG	4 cut(s)	38, 291, 303, 656
DpnI	GATC	3 cut(s)	61, 553, 599
DpnII	GATC	3 cut(s)	59, 551, 597
DraI	TTTAAA	2 cut(s)	619, 783
DriI	GACNNNNNGTC	1 cut(s)	168
Eam1104I	CTCTTC	2 cut(s)	535, 561
Eam1105I	GACNNNNNGTC	1 cut(s)	168
EarI	CTCTTC	2 cut(s)	535, 561
Eco130I	CCWWGG	1 cut(s)	731
Eco24I	GRGCYC	1 cut(s)	484
Eco32I	GATATC	1 cut(s)	340
Eco47I	GGWCC	2 cut(s)	9, 245
Eco88I	CYCGRG	1 cut(s)	333
EcoO109I	RGGNCCY	3 cut(s)	9, 480, 481
EcoRI	GAATTC	2 cut(s)	103, 787
EcoRV	GATATC	1 cut(s)	340
EcoT14I	CCWWGG	1 cut(s)	731
EcoT38I	GRGCYC	1 cut(s)	484
ErhI	CCWWGG	1 cut(s)	731
FaeI	CATG	5 cut(s)	128, 404, 679, 686, 735
FaqI	GGGAC	1 cut(s)	561
FatI	CATG	5 cut(s)	124, 400, 675, 682, 731
FauI	CCCGC	1 cut(s)	506
FblI	GTMKAC	1 cut(s)	672
Fnu4HI	GCNGC	6 cut(s)	288, 459, 462, 663, 666, 744
FokI	GGATG	2 cut(s)	329, 752
FriOI	GRGCYC	1 cut(s)	484
Fsp4HI	GCNGC	6 cut(s)	288, 459, 462, 663, 666, 744
FspBI	CTAG	2 cut(s)	411, 513
GlaI	GCGC	1 cut(s)	301
GluI	GCNGC	6 cut(s)	288, 459, 462, 663, 666, 744
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	3 cut(s)	233, 287, 482
HapII	CCGG	1 cut(s)	209
HhaI	GCGC	1 cut(s)	302
Hin1II	CATG	5 cut(s)	128, 404, 679, 686, 735
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HinfI	GANTC	1 cut(s)	757
HpaII	CCGG	1 cut(s)	209
HphI	GGTGA	3 cut(s)	334, 592, 619
Hpy166II	GTNNAC	2 cut(s)	627, 673
Hpy188I	TCNGA	3 cut(s)	41, 196, 638
Hpy188III	TCNNGA	2 cut(s)	335, 769
Hpy8I	GTNNAC	2 cut(s)	627, 673
Hpy99I	CGWCG	1 cut(s)	166
HpyAV	CCTTC	3 cut(s)	41, 277, 633
HpyCH4V	TGCA	6 cut(s)	121, 177, 398, 419, 464, 662
HpyF10VI	GCNNNNNNNGC	2 cut(s)	118, 127
HpyF3I	CTNAG	4 cut(s)	38, 291, 303, 656
Hsp92II	CATG	5 cut(s)	128, 404, 679, 686, 735
HspAI	GCGC	1 cut(s)	300
Kzo9I	GATC	3 cut(s)	59, 551, 597
LmnI	GCTCC	1 cut(s)	211
Lsp1109I	GCAGC	5 cut(s)	445, 448, 652, 674, 755
LweI	GCATC	2 cut(s)	307, 774
MaeI	CTAG	2 cut(s)	411, 513
MaeIII	GTNAC	2 cut(s)	367, 562
MalI	GATC	3 cut(s)	61, 553, 599
MboI	GATC	3 cut(s)	59, 551, 597
MboII	GAAGA	3 cut(s)	459, 522, 548
MfeI	CAATTG	1 cut(s)	255
MhlI	GDGCHC	1 cut(s)	484
MluCI	AATT	9 cut(s)	42, 64, 103, 116, 198, 249, 255, 391, 787
MmeI	TCCRAC	3 cut(s)	250, 409, 470
MnlI	CCTC	5 cut(s)	45, 298, 342, 437, 535
MseI	TTAA	3 cut(s)	324, 618, 782
MspA1I	CMGCKG	2 cut(s)	665, 746
MspI	CCGG	1 cut(s)	209
MspR9I	CCNGG	1 cut(s)	209
MunI	CAATTG	1 cut(s)	255
MwoI	GCNNNNNNNGC	2 cut(s)	118, 127
NciI	CCSGG	1 cut(s)	209
NcoI	CCATGG	1 cut(s)	731
NdeII	GATC	3 cut(s)	59, 551, 597
NlaIII	CATG	5 cut(s)	128, 404, 679, 686, 735
NlaIV	GGNNCC	4 cut(s)	11, 232, 481, 482
NmuCI	GTSAC	1 cut(s)	367
NspI	RCATGY	1 cut(s)	679
PciI	ACATGT	1 cut(s)	675
PfeI	GAWTC	1 cut(s)	757
PflFI	GACNNNGTC	1 cut(s)	365
PkrI	GCNGC	6 cut(s)	289, 460, 463, 664, 667, 745
PpuMI	RGGWCCY	1 cut(s)	9
PscI	ACATGT	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	9
PspN4I	GGNNCC	4 cut(s)	11, 232, 481, 482
PspOMI	GGGCCC	1 cut(s)	480
PspPI	GGNCC	5 cut(s)	9, 231, 245, 480, 481
PspPPI	RGGWCCY	1 cut(s)	9
PstI	CTGCAG	1 cut(s)	466
PstNI	CAGNNNCTG	2 cut(s)	425, 746
PsyI	GACNNNGTC	1 cut(s)	365
PvuII	CAGCTG	2 cut(s)	665, 746
SaqAI	TTAA	3 cut(s)	324, 618, 782
SatI	GCNGC	6 cut(s)	288, 459, 462, 663, 666, 744
Sau3AI	GATC	3 cut(s)	59, 551, 597
Sau96I	GGNCC	5 cut(s)	9, 231, 245, 480, 481
ScrFI	CCNGG	1 cut(s)	209
SduI	GDGCHC	1 cut(s)	484
SfaNI	GCATC	2 cut(s)	307, 774
SfcI	CTRYAG	1 cut(s)	462
SinI	GGWCC	2 cut(s)	9, 245
Sse9I	AATT	9 cut(s)	42, 64, 103, 116, 198, 249, 255, 391, 787
SsiI	CCGC	4 cut(s)	71, 288, 499, 668
SspMI	CTAG	2 cut(s)	411, 513
StyD4I	CCNGG	1 cut(s)	207
StyI	CCWWGG	1 cut(s)	731
TaqI	TCGA	4 cut(s)	79, 149, 442, 721
TasI	AATT	9 cut(s)	42, 64, 103, 116, 198, 249, 255, 391, 787
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	1 cut(s)	757
Tru1I	TTAA	3 cut(s)	324, 618, 782
Tru9I	TTAA	3 cut(s)	324, 618, 782
TscAI	CASTG	3 cut(s)	471, 664, 716
TseFI	GTSAC	1 cut(s)	367
TseI	GCWGC	5 cut(s)	458, 461, 662, 665, 743
Tsp45I	GTSAC	1 cut(s)	367
TspDTI	ATGAA	2 cut(s)	594, 780
TspRI	CASTG	3 cut(s)	471, 664, 716
Tth111I	GACNNNGTC	1 cut(s)	365
VpaK11BI	GGWCC	2 cut(s)	9, 245
XapI	RAATTY	6 cut(s)	42, 64, 103, 198, 391, 787
XceI	RCATGY	1 cut(s)	679
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XmiI	GTMKAC	1 cut(s)	672
XspI	CTAG	2 cut(s)	411, 513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.