pycom05g23130

Phosphatase IMPL1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
25141915 .. 25143191
1277 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g23130.2

Sequence Viewer

Length: 219 bp
ATGGCAGCTGGTGTTTTGATAGTTGAAGAGGCTGGAGGAAAGGTTACGTGCATGGATGGTGGAAAATTTTCTGTATTTGATAGATCTGTCTTGGTATCCAATGGTGCGTTGCATGGCAAGCTTTTAGAGAGGATTGCACCTGCAACAGAGACGTTGAAGAGCAAAGAAATTGATTTCTCATTGTGGTACAAGCCCGAAGATTACACAACAGACATTTGA

Protein Analysis

73

Amino Acids

7.82

Weight (kDa)

4.94

Isoelectric Point (pI)

32.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 148
Acc36I ACCTGC 1 cut(s) 148
AcsI RAATTY 1 cut(s) 65
AfaI GTAC 1 cut(s) 188
AgsI TTSAA 2 cut(s) 26, 157
AluBI AGCT 2 cut(s) 8, 121
AluI AGCT 2 cut(s) 8, 121
Alw26I GTCTC 1 cut(s) 143
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 65
Asp700I GAANNNNTTC 1 cut(s) 67
BbvI GCAGC 1 cut(s) 17
BccI CCATC 1 cut(s) 50
BciVI GTATCC 1 cut(s) 106
BcoDI GTCTC 1 cut(s) 143
BfuAI ACCTGC 1 cut(s) 148
BfuI GTATCC 1 cut(s) 106
BglII AGATCT 1 cut(s) 83
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BpmI CTGGAG 1 cut(s) 54
BsaAI YACGTR 1 cut(s) 48
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
BseGI GGATG 1 cut(s) 61
BseXI GCAGC 1 cut(s) 17
BsmAI GTCTC 1 cut(s) 143
BsmBI CGTCTC 1 cut(s) 143
Bsp143I GATC 1 cut(s) 83
BspMI ACCTGC 1 cut(s) 148
BspQI GCTCTTC 1 cut(s) 152
BssMI GATC 1 cut(s) 83
Bst6I CTCTTC 2 cut(s) 21, 152
BstBAI YACGTR 1 cut(s) 48
BstC8I GCNNGC 1 cut(s) 119
BstF5I GGATG 1 cut(s) 61
BstKTI GATC 1 cut(s) 86
BstMAI GTCTC 1 cut(s) 143
BstMBI GATC 1 cut(s) 83
BstMWI GCNNNNNNNGC 1 cut(s) 118
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 83
BstYI RGATCY 1 cut(s) 83
BsuI GTATCC 1 cut(s) 106
BtsCI GGATG 1 cut(s) 61
BveI ACCTGC 1 cut(s) 148
Cac8I GCNNGC 1 cut(s) 119
Csp6I GTAC 1 cut(s) 187
CviAII CATG 2 cut(s) 52, 113
CviJI RGCY 4 cut(s) 8, 32, 121, 193
CviKI_1 RGCY 4 cut(s) 8, 32, 121, 193
CviQI GTAC 1 cut(s) 187
DpnI GATC 1 cut(s) 85
DpnII GATC 1 cut(s) 83
Eam1104I CTCTTC 2 cut(s) 21, 152
EarI CTCTTC 2 cut(s) 21, 152
Esp3I CGTCTC 1 cut(s) 143
FaeI CATG 2 cut(s) 55, 116
FaiI YATR 2 cut(s) 53, 114
FatI CATG 2 cut(s) 51, 112
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 1 cut(s) 68
Fsp4HI GCNGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 6
GsuI CTGGAG 1 cut(s) 54
Hin1II CATG 2 cut(s) 55, 116
HindIII AAGCTT 1 cut(s) 119
HpyCH4IV ACGT 2 cut(s) 47, 152
HpyCH4V TGCA 4 cut(s) 51, 112, 137, 143
HpyF10VI GCNNNNNNNGC 1 cut(s) 118
HpySE526I ACGT 2 cut(s) 47, 152
Hsp92II CATG 2 cut(s) 55, 116
Kzo9I GATC 1 cut(s) 83
LguI GCTCTTC 1 cut(s) 152
LpnPI CCDG 2 cut(s) 18, 153
Lsp1109I GCAGC 1 cut(s) 17
MaeII ACGT 2 cut(s) 47, 152
MaeIII GTNAC 1 cut(s) 43
MalI GATC 1 cut(s) 85
MboI GATC 1 cut(s) 83
MboII GAAGA 3 cut(s) 38, 169, 209
MflI RGATCY 1 cut(s) 83
MluCI AATT 2 cut(s) 65, 168
MnlI CCTC 3 cut(s) 22, 29, 123
MroXI GAANNNNTTC 1 cut(s) 67
MspA1I CMGCKG 1 cut(s) 8
MwoI GCNNNNNNNGC 1 cut(s) 118
NdeII GATC 1 cut(s) 83
NlaIII CATG 2 cut(s) 55, 116
PaqCI CACCTGC 1 cut(s) 148
PciSI GCTCTTC 1 cut(s) 152
PdmI GAANNNNTTC 1 cut(s) 67
PkrI GCNGC 1 cut(s) 7
Ppu21I YACGTR 1 cut(s) 48
PsuI RGATCY 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
SapI GCTCTTC 1 cut(s) 152
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 83
SetI ASST 6 cut(s) 10, 45, 50, 123, 142, 155
Sse9I AATT 2 cut(s) 65, 168
TaiI ACGT 2 cut(s) 50, 155
TasI AATT 2 cut(s) 65, 168
TseI GCWGC 1 cut(s) 5
XapI RAATTY 1 cut(s) 65
XmnI GAANNNNTTC 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.