DnaJ homolog subfamily B member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20560 AT4G28480 AT4G28480 |
| fragaria_vesca | FvH4_3g08630 FvH4_6g26690 |
| malus_domestica | MD05G1310300.v1.1 MD10G1289200.v1.1 |
| prunus_persica | Prupe.4G052500_v2.0.a1 |
| pyrus_communis | pycom05g28670 pycom10g24180 |
| rosa_chinensis | RchiOBHm_Chr2g0127101 RchiOBHm_Chr5g0009211 |
| rosa_laevigata | RLG00000018979 RLG00000031634 RLG00000031638 RLG00000031640 |
| rosa_multiflora | Rmu_sc0006233.1_g000031 Rmu_sc0008093.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00066850 Rroxscaffold_1G00067550 Rroxscaffold_2G00115770 Rroxscaffold_2G00116220 |
| rosa_rugosa | Rorug02G0277300 Rorug02G0277400 Rorug04G0441500 |
| rosa_samantha | Rh2AG327900 Rh2BG337900 Rh2CG315000 Rh2DG355000 Rh5AG071300 Rh5BG067800 Rh5CG080100 Rh5DG067800 |
| rosa_wichuraiana | Rw2G026600 Rw5G006660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 19 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 797 |
| Acc36I | ACCTGC | 1 cut(s) | 19 |
| AccB1I | GGYRCC | 1 cut(s) | 93 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 90 |
| AccI | GTMKAC | 1 cut(s) | 846 |
| AciI | CCGC | 9 cut(s) | 236, 239, 242, 264, 405, 414, 420, 490, 615 |
| AclWI | GGATC | 1 cut(s) | 170 |
| AcsI | RAATTY | 1 cut(s) | 983 |
| AfaI | GTAC | 1 cut(s) | 945 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 90, 251, 266, 374, 701, 931, 932 |
| AflIII | ACRYGT | 1 cut(s) | 465 |
| AgsI | TTSAA | 4 cut(s) | 61, 142, 316, 988 |
| AjnI | CCWGG | 2 cut(s) | 259, 661 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 674, 706 |
| AleI | CACNNNNGTG | 1 cut(s) | 893 |
| AluBI | AGCT | 6 cut(s) | 22, 79, 272, 518, 559, 827 |
| AluI | AGCT | 6 cut(s) | 22, 79, 272, 518, 559, 827 |
| Alw21I | GWGCWC | 1 cut(s) | 561 |
| Alw26I | GTCTC | 1 cut(s) | 285 |
| AlwI | GGATC | 1 cut(s) | 170 |
| AoxI | GGCC | 5 cut(s) | 156, 226, 257, 487, 1026 |
| ApeKI | GCWGC | 1 cut(s) | 546 |
| ApoI | RAATTY | 1 cut(s) | 983 |
| AspLEI | GCGC | 1 cut(s) | 508 |
| AspS9I | GGNCC | 3 cut(s) | 257, 296, 952 |
| AsuC2I | CCSGG | 1 cut(s) | 695 |
| AsuHPI | GGTGA | 2 cut(s) | 868, 880 |
| AvaII | GGWCC | 2 cut(s) | 296, 952 |
| BanI | GGYRCC | 1 cut(s) | 93 |
| BanII | GRGCYC | 2 cut(s) | 368, 561 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 53, 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 561 |
| BbvI | GCAGC | 1 cut(s) | 558 |
| BccI | CCATC | 3 cut(s) | 857, 887, 893 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 323, 357 |
| BciT130I | CCWGG | 2 cut(s) | 261, 663 |
| BclI | TGATCA | 2 cut(s) | 199, 897 |
| BcnI | CCSGG | 1 cut(s) | 695 |
| BcoDI | GTCTC | 1 cut(s) | 285 |
| BfaI | CTAG | 2 cut(s) | 818, 860 |
| BfmI | CTRYAG | 1 cut(s) | 26 |
| BfuAI | ACCTGC | 1 cut(s) | 19 |
| BisI | GCNGC | 6 cut(s) | 236, 239, 242, 421, 490, 547 |
| BlsI | GCNGC | 6 cut(s) | 237, 240, 243, 422, 491, 548 |
| Bme1390I | CCNGG | 3 cut(s) | 261, 663, 695 |
| Bme18I | GGWCC | 2 cut(s) | 296, 952 |
| BmgT120I | GGNCC | 3 cut(s) | 257, 296, 952 |
| BmiI | GGNNCC | 3 cut(s) | 95, 679, 954 |
| BmrFI | CCNGG | 3 cut(s) | 261, 663, 695 |
| BmsI | GCATC | 3 cut(s) | 238, 598, 882 |
| BpmI | CTGGAG | 1 cut(s) | 309 |
| BpuEI | CTTGAG | 1 cut(s) | 572 |
| BpuMI | CCSGG | 1 cut(s) | 695 |
| BsaJI | CCNNGG | 1 cut(s) | 369 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 452, 482 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 90, 251, 266, 374, 701, 931, 932 |
| Bse118I | RCCGGY | 2 cut(s) | 251, 1048 |
| Bse1I | ACTGG | 2 cut(s) | 292, 629 |
| BseBI | CCWGG | 2 cut(s) | 261, 663 |
| BseDI | CCNNGG | 1 cut(s) | 369 |
| BseGI | GGATG | 3 cut(s) | 253, 624, 879 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 90, 251, 266, 374, 701, 931, 932 |
| BseMII | CTCAG | 4 cut(s) | 144, 161, 336, 988 |
| BseNI | ACTGG | 2 cut(s) | 292, 629 |
| BseRI | GAGGAG | 2 cut(s) | 569, 929 |
| BseXI | GCAGC | 1 cut(s) | 558 |
| BshFI | GGCC | 5 cut(s) | 158, 228, 259, 489, 1028 |
| BshNI | GGYRCC | 1 cut(s) | 93 |
| BsiHKAI | GWGCWC | 1 cut(s) | 561 |
| BsiSI | CCGG | 5 cut(s) | 245, 252, 695, 1029, 1049 |
| BslFI | GGGAC | 4 cut(s) | 583, 794, 908, 999 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 90, 251, 266, 374, 701, 931, 932 |
| BsmAI | GTCTC | 1 cut(s) | 285 |
| BsmBI | CGTCTC | 1 cut(s) | 285 |
| BsmFI | GGGAC | 4 cut(s) | 583, 794, 908, 999 |
| BsmI | GAATGC | 2 cut(s) | 46, 942 |
| BsnI | GGCC | 5 cut(s) | 158, 228, 259, 489, 1028 |
| Bsp1286I | GDGCHC | 2 cut(s) | 368, 561 |
| Bsp143I | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| Bsp19I | CCATGG | 1 cut(s) | 369 |
| BspACI | CCGC | 9 cut(s) | 236, 239, 242, 264, 405, 414, 420, 490, 615 |
| BspANI | GGCC | 5 cut(s) | 158, 228, 259, 489, 1028 |
| BspCNI | CTCAG | 4 cut(s) | 145, 162, 337, 987 |
| BspLI | GGNNCC | 3 cut(s) | 95, 679, 954 |
| BspMAI | CTGCAG | 1 cut(s) | 30 |
| BspMI | ACCTGC | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 170 |
| BspT107I | GGYRCC | 1 cut(s) | 93 |
| BsrFI | RCCGGY | 2 cut(s) | 251, 1048 |
| BsrI | ACTGG | 2 cut(s) | 292, 629 |
| BssAI | RCCGGY | 2 cut(s) | 251, 1048 |
| BssECI | CCNNGG | 1 cut(s) | 369 |
| BssMI | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| BssT1I | CCWWGG | 1 cut(s) | 369 |
| Bst2UI | CCWGG | 2 cut(s) | 261, 663 |
| Bst4CI | ACNGT | 2 cut(s) | 296, 844 |
| Bst6I | CTCTTC | 2 cut(s) | 179, 527 |
| BstC8I | GCNNGC | 3 cut(s) | 81, 613, 1050 |
| BstDEI | CTNAG | 4 cut(s) | 153, 170, 345, 974 |
| BstDSI | CCRYGG | 1 cut(s) | 369 |
| BstEII | GGTNACC | 1 cut(s) | 968 |
| BstF5I | GGATG | 3 cut(s) | 253, 624, 879 |
| BstHHI | GCGC | 1 cut(s) | 508 |
| BstKTI | GATC | 7 cut(s) | 178, 202, 657, 687, 736, 813, 900 |
| BstMAI | GTCTC | 1 cut(s) | 285 |
| BstMBI | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 241, 411, 420, 498 |
| BstNI | CCWGG | 2 cut(s) | 261, 663 |
| BstNSI | RCATGY | 1 cut(s) | 469 |
| BstPI | GGTNACC | 1 cut(s) | 968 |
| BstSCI | CCNGG | 3 cut(s) | 259, 661, 693 |
| BstSFI | CTRYAG | 1 cut(s) | 26 |
| BstV1I | GCAGC | 1 cut(s) | 558 |
| BsuRI | GGCC | 5 cut(s) | 158, 228, 259, 489, 1028 |
| BtgI | CCRYGG | 1 cut(s) | 369 |
| BtsCI | GGATG | 3 cut(s) | 253, 624, 879 |
| BtsIMutI | CAGTG | 2 cut(s) | 636, 840 |
| BveI | ACCTGC | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 3 cut(s) | 81, 613, 1050 |
| CfoI | GCGC | 1 cut(s) | 508 |
| Cfr10I | RCCGGY | 2 cut(s) | 251, 1048 |
| Cfr13I | GGNCC | 3 cut(s) | 257, 296, 952 |
| Csp6I | GTAC | 1 cut(s) | 944 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 612, 647 |
| CviAII | CATG | 7 cut(s) | 85, 370, 424, 466, 496, 503, 721 |
| CviQI | GTAC | 1 cut(s) | 944 |
| DdeI | CTNAG | 4 cut(s) | 153, 170, 345, 974 |
| DpnI | GATC | 7 cut(s) | 177, 201, 656, 686, 735, 812, 899 |
| DpnII | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 797 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 797 |
| Eam1104I | CTCTTC | 2 cut(s) | 179, 527 |
| EarI | CTCTTC | 2 cut(s) | 179, 527 |
| EciI | GGCGGA | 1 cut(s) | 420 |
| Ecl136II | GAGCTC | 1 cut(s) | 559 |
| Eco130I | CCWWGG | 1 cut(s) | 369 |
| Eco147I | AGGCCT | 1 cut(s) | 158 |
| Eco24I | GRGCYC | 2 cut(s) | 368, 561 |
| Eco47I | GGWCC | 2 cut(s) | 296, 952 |
| Eco53kI | GAGCTC | 1 cut(s) | 559 |
| Eco91I | GGTNACC | 1 cut(s) | 968 |
| EcoICRI | GAGCTC | 1 cut(s) | 559 |
| EcoO109I | RGGNCCY | 1 cut(s) | 952 |
| EcoO65I | GGTNACC | 1 cut(s) | 968 |
| EcoRII | CCWGG | 2 cut(s) | 259, 661 |
| EcoT14I | CCWWGG | 1 cut(s) | 369 |
| EcoT38I | GRGCYC | 2 cut(s) | 368, 561 |
| ErhI | CCWWGG | 1 cut(s) | 369 |
| Esp3I | CGTCTC | 1 cut(s) | 285 |
| FaeI | CATG | 7 cut(s) | 88, 373, 427, 469, 499, 506, 724 |
| FaqI | GGGAC | 4 cut(s) | 583, 794, 908, 999 |
| FatI | CATG | 7 cut(s) | 84, 369, 423, 465, 495, 502, 720 |
| FauI | CCCGC | 1 cut(s) | 608 |
| FbaI | TGATCA | 2 cut(s) | 199, 897 |
| FblI | GTMKAC | 1 cut(s) | 846 |
| Fnu4HI | GCNGC | 6 cut(s) | 236, 239, 242, 421, 490, 547 |
| FokI | GGATG | 3 cut(s) | 260, 631, 866 |
| FriOI | GRGCYC | 2 cut(s) | 368, 561 |
| Fsp4HI | GCNGC | 6 cut(s) | 236, 239, 242, 421, 490, 547 |
| FspBI | CTAG | 2 cut(s) | 818, 860 |
| GlaI | GCGC | 1 cut(s) | 507 |
| GluI | GCNGC | 6 cut(s) | 236, 239, 242, 421, 490, 547 |
| GsuI | CTGGAG | 1 cut(s) | 309 |
| HaeIII | GGCC | 5 cut(s) | 158, 228, 259, 489, 1028 |
| HapII | CCGG | 5 cut(s) | 245, 252, 695, 1029, 1049 |
| HhaI | GCGC | 1 cut(s) | 508 |
| Hin1II | CATG | 7 cut(s) | 88, 373, 427, 469, 499, 506, 724 |
| Hin6I | GCGC | 1 cut(s) | 506 |
| HinP1I | GCGC | 1 cut(s) | 506 |
| HincII | GTYRAC | 1 cut(s) | 847 |
| HindII | GTYRAC | 1 cut(s) | 847 |
| HindIII | AAGCTT | 1 cut(s) | 20 |
| HinfI | GANTC | 5 cut(s) | 131, 312, 724, 978, 1012 |
| HpaII | CCGG | 5 cut(s) | 245, 252, 695, 1029, 1049 |
| HphI | GGTGA | 2 cut(s) | 868, 880 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 847 |
| Hpy188I | TCNGA | 5 cut(s) | 154, 171, 482, 977, 1002 |
| Hpy188III | TCNNGA | 1 cut(s) | 1016 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 847 |
| Hpy99I | CGWCG | 3 cut(s) | 53, 56, 1006 |
| HpyAV | CCTTC | 9 cut(s) | 58, 115, 209, 286, 429, 479, 861, 958, 1018 |
| HpyCH4III | ACNGT | 2 cut(s) | 296, 844 |
| HpyCH4IV | ACGT | 1 cut(s) | 689 |
| HpyCH4V | TGCA | 4 cut(s) | 28, 546, 605, 611 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 241, 411, 420, 498 |
| HpyF3I | CTNAG | 4 cut(s) | 153, 170, 345, 974 |
| HpySE526I | ACGT | 1 cut(s) | 689 |
| Hsp92II | CATG | 7 cut(s) | 88, 373, 427, 469, 499, 506, 724 |
| HspAI | GCGC | 1 cut(s) | 506 |
| KroI | GCCGGC | 1 cut(s) | 1048 |
| KroNI | GCCGGC | 1 cut(s) | 1050 |
| Ksp22I | TGATCA | 2 cut(s) | 199, 897 |
| Kzo9I | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| LmnI | GCTCC | 3 cut(s) | 269, 556, 870 |
| Lsp1109I | GCAGC | 1 cut(s) | 558 |
| LweI | GCATC | 3 cut(s) | 238, 598, 882 |
| MaeI | CTAG | 2 cut(s) | 818, 860 |
| MaeII | ACGT | 1 cut(s) | 689 |
| MaeIII | GTNAC | 2 cut(s) | 799, 968 |
| MalI | GATC | 7 cut(s) | 177, 201, 656, 686, 735, 812, 899 |
| MboI | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| MboII | GAAGA | 8 cut(s) | 73, 196, 224, 271, 544, 592, 598, 820 |
| MhlI | GDGCHC | 2 cut(s) | 368, 561 |
| MluCI | AATT | 4 cut(s) | 600, 747, 983, 1032 |
| MlyI | GAGTC | 2 cut(s) | 140, 1021 |
| MmeI | TCCRAC | 1 cut(s) | 1025 |
| MroNI | GCCGGC | 1 cut(s) | 1048 |
| MseI | TTAA | 1 cut(s) | 1035 |
| MslI | CAYNNNNRTG | 1 cut(s) | 893 |
| MspI | CCGG | 5 cut(s) | 245, 252, 695, 1029, 1049 |
| MspR9I | CCNGG | 3 cut(s) | 261, 663, 695 |
| Mva1269I | GAATGC | 2 cut(s) | 46, 942 |
| MvaI | CCWGG | 2 cut(s) | 261, 663 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 241, 411, 420, 498 |
| NaeI | GCCGGC | 1 cut(s) | 1050 |
| NciI | CCSGG | 1 cut(s) | 695 |
| NcoI | CCATGG | 1 cut(s) | 369 |
| NdeII | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| NgoMIV | GCCGGC | 1 cut(s) | 1048 |
| NlaIII | CATG | 7 cut(s) | 88, 373, 427, 469, 499, 506, 724 |
| NlaIV | GGNNCC | 3 cut(s) | 95, 679, 954 |
| NmeAIII | GCCGAG | 1 cut(s) | 154 |
| NmuCI | GTSAC | 1 cut(s) | 799 |
| NspI | RCATGY | 1 cut(s) | 469 |
| OliI | CACNNNNGTG | 1 cut(s) | 893 |
| PaqCI | CACCTGC | 1 cut(s) | 19 |
| PceI | AGGCCT | 1 cut(s) | 158 |
| PciI | ACATGT | 1 cut(s) | 465 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 795 |
| PctI | GAATGC | 2 cut(s) | 46, 942 |
| PdiI | GCCGGC | 1 cut(s) | 1050 |
| PfeI | GAWTC | 3 cut(s) | 312, 724, 978 |
| PflFI | GACNNNGTC | 1 cut(s) | 794 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 90 |
| PfoI | TCCNGGA | 1 cut(s) | 693 |
| PkrI | GCNGC | 6 cut(s) | 237, 240, 243, 422, 491, 548 |
| PleI | GAGTC | 2 cut(s) | 139, 1020 |
| PpsI | GAGTC | 2 cut(s) | 139, 1020 |
| PpuMI | RGGWCCY | 1 cut(s) | 952 |
| PscI | ACATGT | 1 cut(s) | 465 |
| Psp124BI | GAGCTC | 1 cut(s) | 561 |
| Psp5II | RGGWCCY | 1 cut(s) | 952 |
| Psp6I | CCWGG | 2 cut(s) | 259, 661 |
| PspEI | GGTNACC | 1 cut(s) | 968 |
| PspGI | CCWGG | 2 cut(s) | 259, 661 |
| PspN4I | GGNNCC | 3 cut(s) | 95, 679, 954 |
| PspPI | GGNCC | 3 cut(s) | 257, 296, 952 |
| PspPPI | RGGWCCY | 1 cut(s) | 952 |
| PstI | CTGCAG | 1 cut(s) | 30 |
| PsyI | GACNNNGTC | 1 cut(s) | 794 |
| RsaI | GTAC | 1 cut(s) | 945 |
| RsaNI | GTAC | 1 cut(s) | 944 |
| RseI | CAYNNNNRTG | 1 cut(s) | 893 |
| SacI | GAGCTC | 1 cut(s) | 561 |
| SalI | GTCGAC | 1 cut(s) | 845 |
| SaqAI | TTAA | 1 cut(s) | 1035 |
| SatI | GCNGC | 6 cut(s) | 236, 239, 242, 421, 490, 547 |
| Sau3AI | GATC | 7 cut(s) | 175, 199, 654, 684, 733, 810, 897 |
| Sau96I | GGNCC | 3 cut(s) | 257, 296, 952 |
| SchI | GAGTC | 2 cut(s) | 140, 1021 |
| ScrFI | CCNGG | 3 cut(s) | 261, 663, 695 |
| SduI | GDGCHC | 2 cut(s) | 368, 561 |
| SfaNI | GCATC | 3 cut(s) | 238, 598, 882 |
| SfcI | CTRYAG | 1 cut(s) | 26 |
| SinI | GGWCC | 2 cut(s) | 296, 952 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 893 |
| SmlI | CTYRAG | 1 cut(s) | 551 |
| SmoI | CTYRAG | 1 cut(s) | 551 |
| Sse9I | AATT | 4 cut(s) | 600, 747, 983, 1032 |
| SseBI | AGGCCT | 1 cut(s) | 158 |
| SsiI | CCGC | 9 cut(s) | 236, 239, 242, 264, 405, 414, 420, 490, 615 |
| SspI | AATATT | 1 cut(s) | 1043 |
| SspMI | CTAG | 2 cut(s) | 818, 860 |
| SstI | GAGCTC | 1 cut(s) | 561 |
| StuI | AGGCCT | 1 cut(s) | 158 |
| StyD4I | CCNGG | 3 cut(s) | 259, 661, 693 |
| StyI | CCWWGG | 1 cut(s) | 369 |
| TaaI | ACNGT | 2 cut(s) | 296, 844 |
| TaiI | ACGT | 1 cut(s) | 692 |
| TaqI | TCGA | 3 cut(s) | 362, 593, 846 |
| TasI | AATT | 4 cut(s) | 600, 747, 983, 1032 |
| TauI | GCSGC | 5 cut(s) | 238, 241, 244, 423, 492 |
| TfiI | GAWTC | 3 cut(s) | 312, 724, 978 |
| Tru1I | TTAA | 1 cut(s) | 1035 |
| Tru9I | TTAA | 1 cut(s) | 1035 |
| TscAI | CASTG | 2 cut(s) | 636, 847 |
| TseFI | GTSAC | 1 cut(s) | 799 |
| TseI | GCWGC | 1 cut(s) | 546 |
| Tsp45I | GTSAC | 1 cut(s) | 799 |
| TspDTI | ATGAA | 4 cut(s) | 101, 465, 599, 733 |
| TspGWI | ACGGA | 1 cut(s) | 222 |
| TspRI | CASTG | 2 cut(s) | 636, 847 |
| Tth111I | GACNNNGTC | 1 cut(s) | 794 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 2 cut(s) | 296, 952 |
| XapI | RAATTY | 1 cut(s) | 983 |
| XceI | RCATGY | 1 cut(s) | 469 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 376 |
| XmiI | GTMKAC | 1 cut(s) | 846 |
| XspI | CTAG | 2 cut(s) | 818, 860 |