Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003496

Physical Location & Seq

Genomic Coordinates Forward (+)

6964548 .. 6970001

Gene Structure 5454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031640

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGGTGTGGATTACTACAAGCTTTTACAGGTCGACAGGAGCGCCACAGAAGATGAACTGAAGAAGGCTTACAGAAAATTGGCTGTGAAGCGGCACCCTGAGGAGAACCCCACCAACAAGAAAGAAGCTGAGACCAAATTCAAGCAGATCTCTGAGGCCTATGAGGTTCTGAGTGATCCACAGAAAAGAGCAATCTATGATCAGTATGGTGAAGAAGGCCTGAAAGGCGGAGTGCCGCCTCCTGATGCTGGGGGGCCTGGTGGTGCTACGTATTTCCAAACTGGGGATGGTCCAAATGTGTCTAGATTCAACCCCAGGAATGCTGACGACATTTTTGCAGAGTTCTTCGGGTTTTCTAGCCCGATGGGTGGTGGAATGGGAGGAGGTGGTCGTGGTAGTGGCATGAGGGGCGGAAGATCCTTTGGTGGAATGTTTGAGGATGACATGTTTAGTTCTTTTAGAGAAGGCCGAACCATGAGTGAGGAACCGAGAAAAGCTCCTCCTTTGGAGAGGAAGTTGCCATGTAGTCTTGAGGAGCTCTATAAGGGAACCACAAAGAAAATGAAGATATCTAAGGAAATTGCAGATGCAAGTGGGAGGACATTGCCGGTGGAGGATCGCTTAACCATTGAGGTCAAGCCTGGCTATAAAAAAGGAACACAGATCCCATTCCCAGAGAAAGGGAATGAGGGTCCAAACGAAGTTCCTGCAGATCTTGTATTCATAATCGATGAGAAACCACACAGCACGTTCACAAGGGATGGGAACGACCTAGTGGTAACACAGAATATCTGGCTGGCTGATGCTCTAGCAGGTTACACTATGCATCTCACCACACTAGATGGGAGGACCCTCAACATCTCCATCAACTCCGTCATTCATCCAAACTACGAGGAGATAGTCCCTCGGGAGGGTATGCCTATGCCAGAAGATCCCTCCAAGAAGGGCAACCTTAGAGTGAAATTCAACATCAAATTTCCAACTAGGTTGACTTCTGAGGCCTATGAGGTTCTGAGTGATCTGCAGAAAAAAGGAATCTATGATCAGTATGGTGAAGAAGGCCTGAAGGGCGGAATGCCGCCTCCAGATGCTGGGGGGCCTGGTGGTGCTACGTATTTCCAAACTGGAGATGGTCCAACTGAGTCTAGATTCAACCCCAGGAATGCCGACGACATTTTTGCGGAGTTCTTCGGGTTTTCTAGCCCGATGGGTGGTGGAATGGGAGGAGGTGGTCGTGATAATGGCATGAGGGGCGGAAGATCCTTTGGTGGAATGTTTGAGGATGACATGTTTAGTTCTTTTAGAGAAGGCCGACCCATGAGTGAGGGACCAAGAAAAGCTCCTCCTTTGGAGAGGAAGTTGCCATGTAGTCTTGAGGAGCTCTATAAGGGAACCACAAAGAAAATGAAGATATCTAGGGAAATTGCAGATGCAAGTGGGAGGAGATTGCCGGTGGAGGAAATCTTAACCATTGTGGTCAAGCCTGGCTGGAAAAAAGGAACAAAGATCACTTACCCAGAGAAAGGGAATGACCGTCCAAACGAAGTTCTTGCAGATCTTGTATTTATAATCGATGAGAAACCACACAGCACATTCACGAGGGATGGGAACGACCTGGTGGTAACACAGAAGATCTCGCCGGCCGAAGCTCTAGCAGGTTATACTCTGCATCTCACCACACTAGATGGGAGGACTCTCACCATCCCCATCAACACTGTCATTCATCCAAACTACGAGGAGATAGTCCCTTGGGAGGGTATGCCTATACCAGAAGATCCCTCCAAGAAGGGCAACCTTAGAGTCTATTTTCCGGCGAGGAATGAGATGATCGAACTCTGCCAACAGGCGGCGGAGGTGTGGCCGGAGACGGAGGAGAGCATCGGCAACGGAAGGGAGATGAAGGAAGAGATCGTGGCCGTGTGGGAAGAGACATGGGTGCCCAGATCAATTCTCTCTCTCTCTCACAGACGGACCGGAGGTGCCGATTCGGAGGTGGTGGGGCTTAGCCGCTCGAGTCTCAGCCACTACTTGCAGACAAGAGAGCAGGAGTCGTGGCTGGGCTTGGAGTCGAGTCGCCGGGATCTCGCCGGTGAAATTTTTGGCATTCCTTCCCTGAAACGCCTCTCTCTCTCTCTCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001578 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005929 GO:0005930 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0030030 GO:0030031 GO:0031514 GO:0032838 GO:0035082 GO:0036126 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0044782 GO:0060271 GO:0070925 GO:0071840 GO:0097014 GO:0097223 GO:0097224 GO:0097729 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1904158

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ DnaJ_C

Protein Analysis

714

Amino Acids

78.84

Weight (kDa)

5.48

Isoelectric Point (pI)

49.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	4 - 67	6e-25	DnaJ domain
DnaJ_C	PF01556	170 - 327	1e-35	DnaJ C terminal domain
DnaJ_C	PF01556	451 - 603	9.3e-32	DnaJ C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20560 AT4G28480 AT4G28480
fragaria_vesca	FvH4_3g08630 FvH4_6g26690
malus_domestica	MD05G1310300.v1.1 MD10G1289200.v1.1
prunus_persica	Prupe.4G052500_v2.0.a1
pyrus_communis	pycom05g28670 pycom10g24180
rosa_chinensis	RchiOBHm_Chr2g0127101 RchiOBHm_Chr5g0009211
rosa_laevigata	RLG00000018979 RLG00000031634 RLG00000031638 RLG00000031640
rosa_multiflora	Rmu_sc0006233.1_g000031 Rmu_sc0008093.1_g000002
rosa_roxburghii	Rroxscaffold_1G00066850 Rroxscaffold_1G00067550 Rroxscaffold_2G00115770 Rroxscaffold_2G00116220
rosa_rugosa	Rorug02G0277300 Rorug02G0277400 Rorug04G0441500
rosa_samantha	Rh2AG327900 Rh2BG337900 Rh2CG315000 Rh2DG355000 Rh5AG071300 Rh5BG067800 Rh5CG080100 Rh5DG067800
rosa_wichuraiana	Rw2G026600 Rw5G006660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1568
Acc36I	ACCTGC	2 cut(s)	803, 1646
AccB1I	GGYRCC	3 cut(s)	93, 1936, 1979
AccB7I	CCANNNNNTGG	1 cut(s)	1091
AccBSI	CCGCTC	1 cut(s)	2010
AccI	GTMKAC	1 cut(s)	33
AclWI	GGATC	8 cut(s)	170, 411, 624, 658, 926, 1254, 1769, 2088
AcoI	YGGCCR	3 cut(s)	1641, 1859, 1914
AcsI	RAATTY	4 cut(s)	137, 962, 974, 2094
AcuI	CTGAAG	2 cut(s)	80, 1085
AflIII	ACRYGT	2 cut(s)	444, 1287
AgsI	TTSAA	4 cut(s)	142, 310, 967, 1153
AjnI	CCWGG	7 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614
AluBI	AGCT	7 cut(s)	22, 128, 497, 538, 1340, 1381, 1649
AluI	AGCT	7 cut(s)	22, 128, 497, 538, 1340, 1381, 1649
Alw21I	GWGCWC	2 cut(s)	540, 1383
Alw26I	GTCTC	4 cut(s)	125, 1859, 1922, 2021
AlwI	GGATC	8 cut(s)	170, 411, 624, 658, 926, 1254, 1769, 2088
AlwNI	CAGNNNCTG	1 cut(s)	1091
Ama87I	CYCGRG	2 cut(s)	906, 2011
ApoI	RAATTY	4 cut(s)	137, 962, 974, 2094
ArsI	GACNNNNNNTTYG	4 cut(s)	317, 349, 1160, 1192
AspLEI	GCGC	1 cut(s)	44
AspS9I	GGNCC	8 cut(s)	254, 290, 692, 849, 1097, 1133, 1328, 1971
AsuC2I	CCSGG	1 cut(s)	2078
AsuHPI	GGTGA	6 cut(s)	221, 823, 1064, 1666, 1690, 2102
AvaI	CYCGRG	2 cut(s)	906, 2011
AvaII	GGWCC	6 cut(s)	290, 692, 849, 1133, 1328, 1971
AxyI	CCTNAGG	1 cut(s)	99
BaeGI	GKGCMC	1 cut(s)	1941
BanI	GGYRCC	3 cut(s)	93, 1936, 1979
BanII	GRGCYC	2 cut(s)	540, 1383
BarI	GAAGNNNNNNTAC	2 cut(s)	53, 85
BauI	CACGAG	1 cut(s)	1597
Bbv12I	GWGCWC	2 cut(s)	540, 1383
BceAI	ACGGC	1 cut(s)	1901
BcgI	CGANNNNNNTGC	8 cut(s)	317, 351, 689, 723, 1160, 1194, 1532, 1566
BciT130I	CCWGG	7 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616
BclI	TGATCA	2 cut(s)	199, 1042
BcnI	CCSGG	1 cut(s)	2078
BcoDI	GTCTC	4 cut(s)	125, 1859, 1922, 2021
BfmI	CTRYAG	2 cut(s)	708, 1022
BfoI	RGCGCY	1 cut(s)	45
BfuAI	ACCTGC	2 cut(s)	803, 1646
BglI	GCCNNNNNGGC	2 cut(s)	225, 1068
BglII	AGATCT	4 cut(s)	147, 712, 1555, 1632
BisI	GCNGC	5 cut(s)	92, 236, 1079, 1848, 2008
BlpI	GCTNAGC	1 cut(s)	2003
BlsI	GCNGC	5 cut(s)	93, 237, 1080, 1849, 2009
Bme1390I	CCNGG	8 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616, 2078
Bme18I	GGWCC	6 cut(s)	290, 692, 849, 1133, 1328, 1971
BmeT110I	CYCGRG	2 cut(s)	906, 2011
BmgT120I	GGNCC	8 cut(s)	254, 290, 692, 849, 1097, 1133, 1328, 1971
BmrFI	CCNGG	8 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616, 2078
BmrI	ACTGGG	1 cut(s)	291
BmsI	GCATC	8 cut(s)	235, 577, 793, 835, 1078, 1420, 1678, 1887
BmuI	ACTGGG	1 cut(s)	291
BplI	GAGNNNNNCTC	2 cut(s)	481, 513
BpmI	CTGGAG	2 cut(s)	1068, 1146
Bpu1102I	GCTNAGC	1 cut(s)	2003
BpuEI	CTTGAG	2 cut(s)	551, 1394
BpuMI	CCSGG	1 cut(s)	2078
Bsa29I	ATCGAT	2 cut(s)	729, 1572
BsaAI	YACGTR	2 cut(s)	270, 1113
BsaI	GGTCTC	1 cut(s)	125
BsaJI	CCNNGG	4 cut(s)	314, 905, 1157, 1748
BsaWI	WCCGGW	1 cut(s)	1973
BsaXI	ACNNNNNCTCC	4 cut(s)	500, 530, 1343, 1373
Bse118I	RCCGGY	4 cut(s)	607, 1450, 1639, 2087
Bse1I	ACTGG	2 cut(s)	286, 1129
Bse21I	CCTNAGG	1 cut(s)	99
Bse3DI	GCAATG	1 cut(s)	602
BseBI	CCWGG	7 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616
BseCI	ATCGAT	2 cut(s)	729, 1572
BseDI	CCNNGG	4 cut(s)	314, 905, 1157, 1748
BseGI	GGATG	8 cut(s)	292, 445, 766, 880, 1288, 1609, 1701, 1723
BseMI	GCAATG	1 cut(s)	602
BseMII	CTCAG	8 cut(s)	90, 120, 144, 161, 987, 1004, 1131, 2032
BseNI	ACTGG	2 cut(s)	286, 1129
BseSI	GKGCMC	1 cut(s)	1941
BseX3I	CGGCCG	1 cut(s)	1641
BseYI	CCCAGC	3 cut(s)	248, 1091, 2056
Bsh1285I	CGRYCG	1 cut(s)	1644
BshNI	GGYRCC	3 cut(s)	93, 1936, 1979
BshVI	ATCGAT	2 cut(s)	729, 1572
BsiEI	CGRYCG	1 cut(s)	1644
BsiHKAI	GWGCWC	2 cut(s)	540, 1383
BsiHKCI	CYCGRG	2 cut(s)	906, 2011
BsiSI	CCGG	8 cut(s)	608, 1451, 1640, 1811, 1862, 1974, 2077, 2088
BslFI	GGGAC	3 cut(s)	887, 1341, 1730
BsmAI	GTCTC	4 cut(s)	125, 1859, 1922, 2021
BsmBI	CGTCTC	1 cut(s)	1859
BsmFI	GGGAC	3 cut(s)	887, 1341, 1730
BsmI	GAATGC	4 cut(s)	325, 1080, 1168, 2103
Bso31I	GGTCTC	1 cut(s)	125
BsoBI	CYCGRG	2 cut(s)	906, 2011
Bsp1286I	GDGCHC	3 cut(s)	540, 1383, 1941
Bsp1720I	GCTNAGC	1 cut(s)	2003
BspCNI	CTCAG	8 cut(s)	91, 121, 145, 162, 988, 1005, 1132, 2031
BspDI	ATCGAT	2 cut(s)	729, 1572
BspMAI	CTGCAG	2 cut(s)	712, 1026
BspMI	ACCTGC	2 cut(s)	803, 1646
BspPI	GGATC	8 cut(s)	170, 411, 624, 658, 926, 1254, 1769, 2088
BspT107I	GGYRCC	3 cut(s)	93, 1936, 1979
BspTNI	GGTCTC	1 cut(s)	125
BsrBI	CCGCTC	1 cut(s)	2010
BsrDI	GCAATG	1 cut(s)	602
BsrFI	RCCGGY	4 cut(s)	607, 1450, 1639, 2087
BsrI	ACTGG	2 cut(s)	286, 1129
BssAI	RCCGGY	4 cut(s)	607, 1450, 1639, 2087
BssECI	CCNNGG	4 cut(s)	314, 905, 1157, 1748
BssSI	CACGAG	1 cut(s)	1597
BssT1I	CCWWGG	1 cut(s)	1748
Bst2BI	CACGAG	1 cut(s)	1597
Bst2UI	CCWGG	7 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616
Bst4CI	ACNGT	2 cut(s)	1535, 1717
Bst6I	CTCTTC	2 cut(s)	1899, 1920
BstBAI	YACGTR	2 cut(s)	270, 1113
BstC8I	GCNNGC	2 cut(s)	798, 1641
BstF5I	GGATG	8 cut(s)	292, 445, 766, 880, 1288, 1609, 1701, 1723
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	1 cut(s)	44
BstMAI	GTCTC	4 cut(s)	125, 1859, 1922, 2021
BstMCI	CGRYCG	1 cut(s)	1644
BstMWI	GCNNNNNNNGC	4 cut(s)	225, 408, 1068, 1251
BstNI	CCWGG	7 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616
BstNSI	RCATGY	2 cut(s)	448, 1291
BstSCI	CCNGG	8 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614, 2076
BstSFI	CTRYAG	2 cut(s)	708, 1022
BstSLI	GKGCMC	1 cut(s)	1941
BstSNI	TACGTA	2 cut(s)	270, 1113
BstZI	CGGCCG	1 cut(s)	1641
Bsu15I	ATCGAT	2 cut(s)	729, 1572
Bsu36I	CCTNAGG	1 cut(s)	99
BsuTUI	ATCGAT	2 cut(s)	729, 1572
BtsCI	GGATG	8 cut(s)	292, 445, 766, 880, 1288, 1609, 1701, 1723
BtsIMutI	CAGTG	1 cut(s)	1713
BveI	ACCTGC	2 cut(s)	803, 1646
Cac8I	GCNNGC	2 cut(s)	798, 1641
CaiI	CAGNNNCTG	1 cut(s)	1091
CfoI	GCGC	1 cut(s)	44
Cfr10I	RCCGGY	4 cut(s)	607, 1450, 1639, 2087
Cfr13I	GGNCC	8 cut(s)	254, 290, 692, 849, 1097, 1133, 1328, 1971
ClaI	ATCGAT	2 cut(s)	729, 1572
CpoI	CGGWCCG	1 cut(s)	1971
CsiI	ACCWGGT	1 cut(s)	1614
CspI	CGGWCCG	1 cut(s)	1971
CviAII	CATG	9 cut(s)	403, 445, 475, 522, 1246, 1288, 1318, 1365, 1932
EaeI	YGGCCR	3 cut(s)	1641, 1859, 1914
EagI	CGGCCG	1 cut(s)	1641
Eam1104I	CTCTTC	2 cut(s)	1899, 1920
EarI	CTCTTC	2 cut(s)	1899, 1920
EciI	GGCGGA	5 cut(s)	243, 426, 1086, 1269, 1865
Ecl136II	GAGCTC	2 cut(s)	538, 1381
EclXI	CGGCCG	1 cut(s)	1641
Eco105I	TACGTA	2 cut(s)	270, 1113
Eco130I	CCWWGG	1 cut(s)	1748
Eco147I	AGGCCT	4 cut(s)	158, 219, 1001, 1062
Eco24I	GRGCYC	2 cut(s)	540, 1383
Eco31I	GGTCTC	1 cut(s)	125
Eco32I	GATATC	2 cut(s)	570, 1413
Eco47I	GGWCC	6 cut(s)	290, 692, 849, 1133, 1328, 1971
Eco52I	CGGCCG	1 cut(s)	1641
Eco53kI	GAGCTC	2 cut(s)	538, 1381
Eco57I	CTGAAG	2 cut(s)	80, 1085
Eco81I	CCTNAGG	1 cut(s)	99
Eco88I	CYCGRG	2 cut(s)	906, 2011
EcoICRI	GAGCTC	2 cut(s)	538, 1381
EcoO109I	RGGNCCY	3 cut(s)	254, 849, 1097
EcoRII	CCWGG	7 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614
EcoRV	GATATC	2 cut(s)	570, 1413
EcoT14I	CCWWGG	1 cut(s)	1748
EcoT22I	ATGCAT	1 cut(s)	828
EcoT38I	GRGCYC	2 cut(s)	540, 1383
ErhI	CCWWGG	1 cut(s)	1748
Esp3I	CGTCTC	1 cut(s)	1859
FaeI	CATG	9 cut(s)	406, 448, 478, 525, 1249, 1291, 1321, 1368, 1935
FaqI	GGGAC	3 cut(s)	887, 1341, 1730
FatI	CATG	9 cut(s)	402, 444, 474, 521, 1245, 1287, 1317, 1364, 1931
FbaI	TGATCA	2 cut(s)	199, 1042
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	5 cut(s)	92, 236, 1079, 1848, 2008
FokI	GGATG	8 cut(s)	299, 452, 773, 867, 1295, 1616, 1688, 1710
FriOI	GRGCYC	2 cut(s)	540, 1383
Fsp4HI	GCNGC	5 cut(s)	92, 236, 1079, 1848, 2008
GlaI	GCGC	1 cut(s)	43
GluI	GCNGC	5 cut(s)	92, 236, 1079, 1848, 2008
GsaI	CCCAGC	3 cut(s)	252, 1095, 2060
GsuI	CTGGAG	2 cut(s)	1068, 1146
HaeII	RGCGCY	1 cut(s)	45
HapII	CCGG	8 cut(s)	608, 1451, 1640, 1811, 1862, 1974, 2077, 2088
HhaI	GCGC	1 cut(s)	44
Hin1II	CATG	9 cut(s)	406, 448, 478, 525, 1249, 1291, 1321, 1368, 1935
Hin6I	GCGC	1 cut(s)	42
HinP1I	GCGC	1 cut(s)	42
HincII	GTYRAC	2 cut(s)	34, 990
HindII	GTYRAC	2 cut(s)	34, 990
HindIII	AAGCTT	1 cut(s)	20
HpaII	CCGG	8 cut(s)	608, 1451, 1640, 1811, 1862, 1974, 2077, 2088
HphI	GGTGA	6 cut(s)	221, 823, 1064, 1666, 1690, 2102
Hpy166II	GTNNAC	3 cut(s)	34, 753, 990
Hpy188I	TCNGA	5 cut(s)	154, 171, 997, 1014, 1990
Hpy188III	TCNNGA	9 cut(s)	242, 303, 530, 908, 1085, 1146, 1235, 1373, 1597
Hpy8I	GTNNAC	3 cut(s)	34, 753, 990
Hpy99I	CGWCG	1 cut(s)	1172
HpyCH4III	ACNGT	2 cut(s)	1535, 1717
HpyCH4IV	ACGT	3 cut(s)	269, 749, 1112
HpyF10VI	GCNNNNNNNGC	4 cut(s)	225, 408, 1068, 1251
HpySE526I	ACGT	3 cut(s)	269, 749, 1112
Hsp92II	CATG	9 cut(s)	406, 448, 478, 525, 1249, 1291, 1321, 1368, 1935
HspAI	GCGC	1 cut(s)	42
KroI	GCCGGC	1 cut(s)	1639
KroNI	GCCGGC	1 cut(s)	1641
Ksp22I	TGATCA	2 cut(s)	199, 1042
LmnI	GCTCC	5 cut(s)	39, 502, 535, 1345, 1378
LweI	GCATC	8 cut(s)	235, 577, 793, 835, 1078, 1420, 1678, 1887
MabI	ACCWGGT	1 cut(s)	1614
MaeII	ACGT	3 cut(s)	269, 749, 1112
MaeIII	GTNAC	3 cut(s)	778, 815, 1621
MbiI	CCGCTC	1 cut(s)	2010
MhlI	GDGCHC	3 cut(s)	540, 1383, 1941
MluCI	AATT	8 cut(s)	77, 137, 579, 962, 974, 1422, 1947, 2094
MlyI	GAGTC	7 cut(s)	1151, 1687, 1809, 2023, 2057, 2075, 2080
MmeI	TCCRAC	2 cut(s)	1004, 1160
Mph1103I	ATGCAT	1 cut(s)	828
MroNI	GCCGGC	1 cut(s)	1639
MseI	TTAA	2 cut(s)	623, 1466
MspI	CCGG	8 cut(s)	608, 1451, 1640, 1811, 1862, 1974, 2077, 2088
MspR9I	CCNGG	8 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616, 2078
Mva1269I	GAATGC	4 cut(s)	325, 1080, 1168, 2103
MvaI	CCWGG	7 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616
MwoI	GCNNNNNNNGC	4 cut(s)	225, 408, 1068, 1251
NaeI	GCCGGC	1 cut(s)	1641
NciI	CCSGG	1 cut(s)	2078
NgoMIV	GCCGGC	1 cut(s)	1639
NlaIII	CATG	9 cut(s)	406, 448, 478, 525, 1249, 1291, 1321, 1368, 1935
NsiI	ATGCAT	1 cut(s)	828
NspI	RCATGY	2 cut(s)	448, 1291
PaeR7I	CTCGAG	1 cut(s)	2011
PceI	AGGCCT	4 cut(s)	158, 219, 1001, 1062
PciI	ACATGT	2 cut(s)	444, 1287
PctI	GAATGC	4 cut(s)	325, 1080, 1168, 2103
PdiI	GCCGGC	1 cut(s)	1641
PfeI	GAWTC	4 cut(s)	306, 1035, 1149, 1985
PflMI	CCANNNNNTGG	1 cut(s)	1091
PkrI	GCNGC	5 cut(s)	93, 237, 1080, 1849, 2009
PleI	GAGTC	7 cut(s)	1150, 1687, 1808, 2022, 2056, 2074, 2079
PpsI	GAGTC	7 cut(s)	1150, 1687, 1808, 2022, 2056, 2074, 2079
Ppu21I	YACGTR	2 cut(s)	270, 1113
PpuMI	RGGWCCY	1 cut(s)	849
PscI	ACATGT	2 cut(s)	444, 1287
PsiI	TTATAA	1 cut(s)	1568
Psp124BI	GAGCTC	2 cut(s)	540, 1383
Psp5II	RGGWCCY	1 cut(s)	849
Psp6I	CCWGG	7 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614
PspFI	CCCAGC	3 cut(s)	248, 1091, 2056
PspGI	CCWGG	7 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614
PspPI	GGNCC	8 cut(s)	254, 290, 692, 849, 1097, 1133, 1328, 1971
PspPPI	RGGWCCY	1 cut(s)	849
PspXI	VCTCGAGB	1 cut(s)	2011
PstI	CTGCAG	2 cut(s)	712, 1026
PstNI	CAGNNNCTG	1 cut(s)	1091
Rsr2I	CGGWCCG	1 cut(s)	1971
RsrII	CGGWCCG	1 cut(s)	1971
SacI	GAGCTC	2 cut(s)	540, 1383
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	2 cut(s)	623, 1466
SatI	GCNGC	5 cut(s)	92, 236, 1079, 1848, 2008
Sau96I	GGNCC	8 cut(s)	254, 290, 692, 849, 1097, 1133, 1328, 1971
SchI	GAGTC	7 cut(s)	1151, 1687, 1809, 2023, 2057, 2075, 2080
ScrFI	CCNGG	8 cut(s)	258, 316, 642, 1101, 1159, 1485, 1616, 2078
SduI	GDGCHC	3 cut(s)	540, 1383, 1941
SexAI	ACCWGGT	1 cut(s)	1614
SfaNI	GCATC	8 cut(s)	235, 577, 793, 835, 1078, 1420, 1678, 1887
SfcI	CTRYAG	2 cut(s)	708, 1022
Sfr274I	CTCGAG	1 cut(s)	2011
SgrAI	CRCCGGYG	1 cut(s)	2087
SinI	GGWCC	6 cut(s)	290, 692, 849, 1133, 1328, 1971
SlaI	CTCGAG	1 cut(s)	2011
SmlI	CTYRAG	3 cut(s)	530, 1373, 2011
SmoI	CTYRAG	3 cut(s)	530, 1373, 2011
SnaBI	TACGTA	2 cut(s)	270, 1113
Sse9I	AATT	8 cut(s)	77, 137, 579, 962, 974, 1422, 1947, 2094
SseBI	AGGCCT	4 cut(s)	158, 219, 1001, 1062
SstI	GAGCTC	2 cut(s)	540, 1383
StuI	AGGCCT	4 cut(s)	158, 219, 1001, 1062
StyD4I	CCNGG	8 cut(s)	256, 314, 640, 1099, 1157, 1483, 1614, 2076
StyI	CCWWGG	1 cut(s)	1748
TaaI	ACNGT	2 cut(s)	1535, 1717
TaiI	ACGT	3 cut(s)	272, 752, 1115
TaqI	TCGA	6 cut(s)	33, 729, 1572, 1830, 2012, 2069
TasI	AATT	8 cut(s)	77, 137, 579, 962, 974, 1422, 1947, 2094
TauI	GCSGC	5 cut(s)	94, 238, 1081, 1850, 2010
TfiI	GAWTC	4 cut(s)	306, 1035, 1149, 1985
Tru1I	TTAA	2 cut(s)	623, 1466
Tru9I	TTAA	2 cut(s)	623, 1466
TscAI	CASTG	1 cut(s)	1720
TspDTI	ATGAA	7 cut(s)	69, 578, 712, 869, 1421, 1712, 1913
TspGWI	ACGGA	4 cut(s)	862, 1883, 1902, 1984
TspRI	CASTG	1 cut(s)	1720
Van91I	CCANNNNNTGG	1 cut(s)	1091
VpaK11BI	GGWCC	6 cut(s)	290, 692, 849, 1133, 1328, 1971
XapI	RAATTY	4 cut(s)	137, 962, 974, 2094
XbaI	TCTAGA	2 cut(s)	302, 1145
XceI	RCATGY	2 cut(s)	448, 1291
XcmI	CCANNNNNNNNNTGG	2 cut(s)	284, 1127
XhoI	CTCGAG	1 cut(s)	2011
XmiI	GTMKAC	1 cut(s)	33
Zsp2I	ATGCAT	1 cut(s)	828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.