RLG00000031638

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
6952055 .. 6954087
2033 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031638

Sequence Viewer

Length: 1086 bp
ATGGGTGTGGATTACTACAAGCTCTTACAGGTCGACAAGAGCGCCACAGAAGATGAACTGAAGAAGGCTTACAGAAAATTGGCTCTGACGTGGCACCCTGATAAGAACCCCAGCAATAAGAAAGAAGCTGAGACCAAATTCAAGCAGATCTCTGAGGCCTATTATGTTCTGAGTGATCCGCAGAATAGAGCAATCTATCATCAGTATGGTGAAGAAGGCGTAAAAGGCCAAATGCCGCCTCCATATGCTGGGAGGCCTGGTGGTGCTACGTATTTTCAAACTGGAGATGGTCCAAATGTGTTTAGATTCAACCCTAGGAATGCCAACGAAATTTTGGCAGAGATGTTAAGGTTGTCTAGCCCGATGGGTGGTGGAATGGGAGGAGGTGGTCTTGGTAGTGGCATGAGGGGTGGAAGATCATTTGGTGGAATGTTTGGGGATGACATGTTTAGTTTTTTTGGAGAAGTCCGACCGATGAGTCAGGGACCTCCTTTGGAGAGGAAGTTGCCCTGTAGTCTTGAGGAGCTCTACACGGGAACCACAAAGAAGATGAAGGTATCTAGGAAAATTGCAGATGCAAGCGGGAGGACATTGCCGGTGGAGGATCGCTTAACCATTGAGGTCAAGCCTGGCTATAAAAAAGGAACACAGATCCCATTCCCAGAGAAAGGGAATGAGGGTCCAAACGAAGTTCCTGCAGATCTTGTATTCATAATCGATGAGAAACCACACAGCACGTTCACAAGGGATGGGAACGACCTAGTGGTAACACAGAATATCTGGCTGGCTGATGCTCTAGCAGGTTACACTATGCATCTCACCACACTAGATGGGAGGACCCTCAACATCTCCATCAACTCCGTCATTCATCCAAACTACGAGGAGATAGTCCCTCGGGAGGGTATGCCTATGCCAGAAGATCCCTCCAAGAAGGGCAACCTTAGAGTGAAATTCAACATCAAATTTCCAACTAGGTTGACTCCTGAACAGAAGGCTGGAATCAAGGAACTTTTGGCTGCACAGCCGCTTTTTTCGATTCTCAAAGAGCATTGTGAAAATTTTTTTAGAGGACTTGGATATGTATAA

Protein Analysis

362

Amino Acids

40.13

Weight (kDa)

8.57

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 66 7.3e-26 DnaJ domain
DnaJ_C PF01556 166 - 323 3.2e-36 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 477
Acc36I ACCTGC 1 cut(s) 791
AccB1I GGYRCC 1 cut(s) 93
AccB7I CCANNNNNTGG 1 cut(s) 248
AccI GTMKAC 1 cut(s) 33
AciI CCGC 4 cut(s) 179, 236, 582, 1025
AclWI GGATC 4 cut(s) 170, 612, 646, 914
AcsI RAATTY 5 cut(s) 137, 330, 950, 962, 1057
AcuI CTGAAG 1 cut(s) 80
AfiI CCNNNNNNNGG 5 cut(s) 248, 368, 668, 898, 899
AflIII ACRYGT 1 cut(s) 444
AgsI TTSAA 4 cut(s) 142, 278, 310, 955
AjiI CACGTC 1 cut(s) 90
AjnI CCWGG 2 cut(s) 256, 628
AluBI AGCT 3 cut(s) 22, 128, 526
AluI AGCT 3 cut(s) 22, 128, 526
Alw21I GWGCWC 1 cut(s) 528
Alw26I GTCTC 1 cut(s) 125
AlwI GGATC 4 cut(s) 170, 612, 646, 914
Ama87I CYCGRG 1 cut(s) 894
AoxI GGCC 3 cut(s) 156, 226, 254
ApeKI GCWGC 1 cut(s) 1016
ApoI RAATTY 5 cut(s) 137, 330, 950, 962, 1057
AspA2I CCTAGG 1 cut(s) 314
AspLEI GCGC 1 cut(s) 44
AspS9I GGNCC 4 cut(s) 290, 485, 680, 837
AsuHPI GGTGA 2 cut(s) 221, 811
AvaI CYCGRG 1 cut(s) 894
AvaII GGWCC 4 cut(s) 290, 485, 680, 837
AvrII CCTAGG 1 cut(s) 314
BanI GGYRCC 1 cut(s) 93
BanII GRGCYC 1 cut(s) 528
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
Bbv12I GWGCWC 1 cut(s) 528
BbvI GCAGC 1 cut(s) 1003
BccI CCATC 5 cut(s) 281, 358, 743, 824, 860
BcgI CGANNNNNNTGC 2 cut(s) 677, 711
BciT130I CCWGG 2 cut(s) 258, 630
BcoDI GTCTC 1 cut(s) 125
BfaI CTAG 7 cut(s) 315, 357, 561, 761, 797, 827, 972
BfmI CTRYAG 2 cut(s) 511, 696
BfoI RGCGCY 1 cut(s) 45
BfuAI ACCTGC 1 cut(s) 791
BglII AGATCT 2 cut(s) 147, 700
BisI GCNGC 3 cut(s) 236, 1017, 1025
BlnI CCTAGG 1 cut(s) 314
BlsI GCNGC 3 cut(s) 237, 1018, 1026
Bme1390I CCNGG 2 cut(s) 258, 630
Bme18I GGWCC 4 cut(s) 290, 485, 680, 837
BmeT110I CYCGRG 1 cut(s) 894
BmgBI CACGTC 1 cut(s) 90
BmgT120I GGNCC 4 cut(s) 290, 485, 680, 837
BmiI GGNNCC 5 cut(s) 95, 486, 538, 681, 839
BmrFI CCNGG 2 cut(s) 258, 630
BmsI GCATC 3 cut(s) 565, 781, 823
BpmI CTGGAG 1 cut(s) 303
BpuEI CTTGAG 1 cut(s) 539
Bsa29I ATCGAT 1 cut(s) 717
BsaAI YACGTR 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 2 cut(s) 314, 893
BsaXI ACNNNNNCTCC 4 cut(s) 244, 274, 488, 518
Bsc4I CCNNNNNNNGG 5 cut(s) 248, 368, 668, 898, 899
Bse118I RCCGGY 1 cut(s) 595
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 590
BseBI CCWGG 2 cut(s) 258, 630
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 2 cut(s) 314, 893
BseGI GGATG 3 cut(s) 445, 754, 868
BseLI CCNNNNNNNGG 5 cut(s) 248, 368, 668, 898, 899
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 3 cut(s) 120, 144, 161
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 3 cut(s) 396, 536, 896
BseXI GCAGC 1 cut(s) 1003
BseYI CCCAGC 2 cut(s) 110, 248
BsgI GTGCAG 1 cut(s) 1002
Bsh1285I CGRYCG 1 cut(s) 473
BshFI GGCC 3 cut(s) 158, 228, 256
BshNI GGYRCC 1 cut(s) 93
BshVI ATCGAT 1 cut(s) 717
BsiEI CGRYCG 1 cut(s) 473
BsiHKAI GWGCWC 1 cut(s) 528
BsiHKCI CYCGRG 1 cut(s) 894
BsiSI CCGG 1 cut(s) 596
BslFI GGGAC 2 cut(s) 498, 875
BslI CCNNNNNNNGG 5 cut(s) 248, 368, 668, 898, 899
BsmAI GTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 498, 875
BsmI GAATGC 1 cut(s) 325
BsnI GGCC 3 cut(s) 158, 228, 256
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 894
Bsp1286I GDGCHC 1 cut(s) 528
Bsp143I GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
BspACI CCGC 4 cut(s) 179, 236, 582, 1025
BspANI GGCC 3 cut(s) 158, 228, 256
BspCNI CTCAG 3 cut(s) 121, 145, 162
BspDI ATCGAT 1 cut(s) 717
BspLI GGNNCC 5 cut(s) 95, 486, 538, 681, 839
BspMAI CTGCAG 1 cut(s) 700
BspMI ACCTGC 1 cut(s) 791
BspPI GGATC 4 cut(s) 170, 612, 646, 914
BspT107I GGYRCC 1 cut(s) 93
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 590
BsrFI RCCGGY 1 cut(s) 595
BsrI ACTGG 1 cut(s) 286
BssAI RCCGGY 1 cut(s) 595
BssECI CCNNGG 2 cut(s) 314, 893
BssMI GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
BssT1I CCWWGG 1 cut(s) 314
Bst2UI CCWGG 2 cut(s) 258, 630
BstBAI YACGTR 1 cut(s) 270
BstC8I GCNNGC 2 cut(s) 580, 786
BstDEI CTNAG 4 cut(s) 129, 153, 170, 941
BstF5I GGATG 3 cut(s) 445, 754, 868
BstH2I RGCGCY 1 cut(s) 45
BstHHI GCGC 1 cut(s) 44
BstKTI GATC 7 cut(s) 150, 178, 419, 607, 654, 703, 922
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
BstMCI CGRYCG 1 cut(s) 473
BstMWI GCNNNNNNNGC 1 cut(s) 225
BstNI CCWGG 2 cut(s) 258, 630
BstNSI RCATGY 1 cut(s) 448
BstSCI CCNGG 2 cut(s) 256, 628
BstSFI CTRYAG 2 cut(s) 511, 696
BstSNI TACGTA 1 cut(s) 270
BstV1I GCAGC 1 cut(s) 1003
BstX2I RGATCY 4 cut(s) 147, 651, 700, 919
BstYI RGATCY 4 cut(s) 147, 651, 700, 919
Bsu15I ATCGAT 1 cut(s) 717
BsuRI GGCC 3 cut(s) 158, 228, 256
BsuTUI ATCGAT 1 cut(s) 717
BtrI CACGTC 1 cut(s) 90
BtsCI GGATG 3 cut(s) 445, 754, 868
BveI ACCTGC 1 cut(s) 791
Cac8I GCNNGC 2 cut(s) 580, 786
CfoI GCGC 1 cut(s) 44
Cfr10I RCCGGY 1 cut(s) 595
Cfr13I GGNCC 4 cut(s) 290, 485, 680, 837
ClaI ATCGAT 1 cut(s) 717
CviAII CATG 2 cut(s) 403, 445
DdeI CTNAG 4 cut(s) 129, 153, 170, 941
DpnI GATC 7 cut(s) 149, 177, 418, 606, 653, 702, 921
DpnII GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
DrdI GACNNNNNNGTC 1 cut(s) 477
DseDI GACNNNNNNGTC 1 cut(s) 477
Ecl136II GAGCTC 1 cut(s) 526
Eco105I TACGTA 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 314
Eco147I AGGCCT 2 cut(s) 158, 256
Eco24I GRGCYC 1 cut(s) 528
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 4 cut(s) 290, 485, 680, 837
Eco53kI GAGCTC 1 cut(s) 526
Eco57I CTGAAG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 894
EcoICRI GAGCTC 1 cut(s) 526
EcoO109I RGGNCCY 2 cut(s) 485, 837
EcoRII CCWGG 2 cut(s) 256, 628
EcoT14I CCWWGG 1 cut(s) 314
EcoT22I ATGCAT 1 cut(s) 816
EcoT38I GRGCYC 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 314
FaeI CATG 2 cut(s) 406, 448
FaqI GGGAC 2 cut(s) 498, 875
FatI CATG 2 cut(s) 402, 444
FauI CCCGC 1 cut(s) 575
FauNDI CATATG 1 cut(s) 244
FblI GTMKAC 1 cut(s) 33
Fnu4HI GCNGC 3 cut(s) 236, 1017, 1025
FokI GGATG 3 cut(s) 452, 761, 855
FriOI GRGCYC 1 cut(s) 528
Fsp4HI GCNGC 3 cut(s) 236, 1017, 1025
FspBI CTAG 7 cut(s) 315, 357, 561, 761, 797, 827, 972
GlaI GCGC 1 cut(s) 43
GluI GCNGC 3 cut(s) 236, 1017, 1025
GsaI CCCAGC 2 cut(s) 114, 252
GsuI CTGGAG 1 cut(s) 303
HaeII RGCGCY 1 cut(s) 45
HaeIII GGCC 3 cut(s) 158, 228, 256
HapII CCGG 1 cut(s) 596
HhaI GCGC 1 cut(s) 44
Hin1II CATG 2 cut(s) 406, 448
Hin6I GCGC 1 cut(s) 42
HinP1I GCGC 1 cut(s) 42
HincII GTYRAC 2 cut(s) 34, 978
HindII GTYRAC 2 cut(s) 34, 978
HinfI GANTC 5 cut(s) 306, 478, 979, 999, 1036
HpaII CCGG 1 cut(s) 596
HphI GGTGA 2 cut(s) 221, 811
Hpy166II GTNNAC 3 cut(s) 34, 741, 978
Hpy188I TCNGA 4 cut(s) 87, 154, 171, 470
Hpy188III TCNNGA 3 cut(s) 518, 896, 983
Hpy8I GTNNAC 3 cut(s) 34, 741, 978
HpyAV CCTTC 5 cut(s) 58, 209, 547, 925, 985
HpyCH4IV ACGT 3 cut(s) 89, 269, 737
HpyCH4V TGCA 5 cut(s) 572, 578, 698, 814, 1019
HpyF10VI GCNNNNNNNGC 1 cut(s) 225
HpyF3I CTNAG 4 cut(s) 129, 153, 170, 941
HpySE526I ACGT 3 cut(s) 89, 269, 737
Hsp92II CATG 2 cut(s) 406, 448
HspAI GCGC 1 cut(s) 42
Kzo9I GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
LmnI GCTCC 1 cut(s) 523
Lsp1109I GCAGC 1 cut(s) 1003
LweI GCATC 3 cut(s) 565, 781, 823
MaeI CTAG 7 cut(s) 315, 357, 561, 761, 797, 827, 972
MaeII ACGT 3 cut(s) 89, 269, 737
MaeIII GTNAC 2 cut(s) 766, 803
MalI GATC 7 cut(s) 149, 177, 418, 606, 653, 702, 921
MboI GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
MboII GAAGA 6 cut(s) 62, 73, 224, 426, 559, 929
MflI RGATCY 4 cut(s) 147, 651, 700, 919
MhlI GDGCHC 1 cut(s) 528
MluCI AATT 7 cut(s) 77, 137, 330, 567, 950, 962, 1057
MlyI GAGTC 2 cut(s) 487, 973
MmeI TCCRAC 2 cut(s) 493, 992
Mph1103I ATGCAT 1 cut(s) 816
MseI TTAA 2 cut(s) 347, 611
MslI CAYNNNNRTG 1 cut(s) 204
MspI CCGG 1 cut(s) 596
MspR9I CCNGG 2 cut(s) 258, 630
Mva1269I GAATGC 1 cut(s) 325
MvaI CCWGG 2 cut(s) 258, 630
MwoI GCNNNNNNNGC 1 cut(s) 225
NdeI CATATG 1 cut(s) 244
NdeII GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
NlaIII CATG 2 cut(s) 406, 448
NlaIV GGNNCC 5 cut(s) 95, 486, 538, 681, 839
NsiI ATGCAT 1 cut(s) 816
NspI RCATGY 1 cut(s) 448
PceI AGGCCT 2 cut(s) 158, 256
PciI ACATGT 1 cut(s) 444
PctI GAATGC 1 cut(s) 325
PfeI GAWTC 3 cut(s) 306, 999, 1036
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 3 cut(s) 237, 1018, 1026
PleI GAGTC 2 cut(s) 486, 973
PpsI GAGTC 2 cut(s) 486, 973
Ppu21I YACGTR 1 cut(s) 270
PpuMI RGGWCCY 2 cut(s) 485, 837
PscI ACATGT 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 528
Psp5II RGGWCCY 2 cut(s) 485, 837
Psp6I CCWGG 2 cut(s) 256, 628
PspFI CCCAGC 2 cut(s) 110, 248
PspGI CCWGG 2 cut(s) 256, 628
PspN4I GGNNCC 5 cut(s) 95, 486, 538, 681, 839
PspPI GGNCC 4 cut(s) 290, 485, 680, 837
PspPPI RGGWCCY 2 cut(s) 485, 837
PstI CTGCAG 1 cut(s) 700
PsuI RGATCY 4 cut(s) 147, 651, 700, 919
RseI CAYNNNNRTG 1 cut(s) 204
SacI GAGCTC 1 cut(s) 528
SalI GTCGAC 1 cut(s) 32
SaqAI TTAA 2 cut(s) 347, 611
SatI GCNGC 3 cut(s) 236, 1017, 1025
Sau3AI GATC 7 cut(s) 147, 175, 416, 604, 651, 700, 919
Sau96I GGNCC 4 cut(s) 290, 485, 680, 837
SchI GAGTC 2 cut(s) 487, 973
ScrFI CCNGG 2 cut(s) 258, 630
SduI GDGCHC 1 cut(s) 528
SfaNI GCATC 3 cut(s) 565, 781, 823
SfcI CTRYAG 2 cut(s) 511, 696
SinI GGWCC 4 cut(s) 290, 485, 680, 837
SmiMI CAYNNNNRTG 1 cut(s) 204
SmlI CTYRAG 1 cut(s) 518
SmoI CTYRAG 1 cut(s) 518
SnaBI TACGTA 1 cut(s) 270
Sse9I AATT 7 cut(s) 77, 137, 330, 567, 950, 962, 1057
SseBI AGGCCT 2 cut(s) 158, 256
SsiI CCGC 4 cut(s) 179, 236, 582, 1025
SspMI CTAG 7 cut(s) 315, 357, 561, 761, 797, 827, 972
SstI GAGCTC 1 cut(s) 528
StuI AGGCCT 2 cut(s) 158, 256
StyD4I CCNGG 2 cut(s) 256, 628
StyI CCWWGG 1 cut(s) 314
TaiI ACGT 3 cut(s) 92, 272, 740
TaqI TCGA 3 cut(s) 33, 717, 1034
TaqII GACCGA 1 cut(s) 487
TasI AATT 7 cut(s) 77, 137, 330, 567, 950, 962, 1057
TauI GCSGC 2 cut(s) 238, 1027
TfiI GAWTC 3 cut(s) 306, 999, 1036
Tru1I TTAA 2 cut(s) 347, 611
Tru9I TTAA 2 cut(s) 347, 611
TseI GCWGC 1 cut(s) 1016
TspDTI ATGAA 4 cut(s) 69, 566, 700, 857
TspGWI ACGGA 1 cut(s) 850
Van91I CCANNNNNTGG 1 cut(s) 248
VpaK11BI GGWCC 4 cut(s) 290, 485, 680, 837
XapI RAATTY 5 cut(s) 137, 330, 950, 962, 1057
XceI RCATGY 1 cut(s) 448
XcmI CCANNNNNNNNNTGG 1 cut(s) 331
XmaJI CCTAGG 1 cut(s) 314
XmiI GTMKAC 1 cut(s) 33
XspI CTAG 7 cut(s) 315, 357, 561, 761, 797, 827, 972
Zsp2I ATGCAT 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.