DnaJ homolog subfamily B member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20560 AT4G28480 AT4G28480 |
| fragaria_vesca | FvH4_3g08630 FvH4_6g26690 |
| malus_domestica | MD05G1310300.v1.1 MD10G1289200.v1.1 |
| prunus_persica | Prupe.4G052500_v2.0.a1 |
| pyrus_communis | pycom05g28670 pycom10g24180 |
| rosa_chinensis | RchiOBHm_Chr2g0127101 RchiOBHm_Chr5g0009211 |
| rosa_laevigata | RLG00000018979 RLG00000031634 RLG00000031638 RLG00000031640 |
| rosa_multiflora | Rmu_sc0006233.1_g000031 Rmu_sc0008093.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00066850 Rroxscaffold_1G00067550 Rroxscaffold_2G00115770 Rroxscaffold_2G00116220 |
| rosa_rugosa | Rorug02G0277300 Rorug02G0277400 Rorug04G0441500 |
| rosa_samantha | Rh2AG327900 Rh2BG337900 Rh2CG315000 Rh2DG355000 Rh5AG071300 Rh5BG067800 Rh5CG080100 Rh5DG067800 |
| rosa_wichuraiana | Rw2G026600 Rw5G006660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 477 |
| Acc36I | ACCTGC | 1 cut(s) | 791 |
| AccB1I | GGYRCC | 1 cut(s) | 93 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 248 |
| AccI | GTMKAC | 1 cut(s) | 33 |
| AciI | CCGC | 4 cut(s) | 179, 236, 582, 1025 |
| AclWI | GGATC | 4 cut(s) | 170, 612, 646, 914 |
| AcsI | RAATTY | 5 cut(s) | 137, 330, 950, 962, 1057 |
| AcuI | CTGAAG | 1 cut(s) | 80 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 248, 368, 668, 898, 899 |
| AflIII | ACRYGT | 1 cut(s) | 444 |
| AgsI | TTSAA | 4 cut(s) | 142, 278, 310, 955 |
| AjiI | CACGTC | 1 cut(s) | 90 |
| AjnI | CCWGG | 2 cut(s) | 256, 628 |
| AluBI | AGCT | 3 cut(s) | 22, 128, 526 |
| AluI | AGCT | 3 cut(s) | 22, 128, 526 |
| Alw21I | GWGCWC | 1 cut(s) | 528 |
| Alw26I | GTCTC | 1 cut(s) | 125 |
| AlwI | GGATC | 4 cut(s) | 170, 612, 646, 914 |
| Ama87I | CYCGRG | 1 cut(s) | 894 |
| AoxI | GGCC | 3 cut(s) | 156, 226, 254 |
| ApeKI | GCWGC | 1 cut(s) | 1016 |
| ApoI | RAATTY | 5 cut(s) | 137, 330, 950, 962, 1057 |
| AspA2I | CCTAGG | 1 cut(s) | 314 |
| AspLEI | GCGC | 1 cut(s) | 44 |
| AspS9I | GGNCC | 4 cut(s) | 290, 485, 680, 837 |
| AsuHPI | GGTGA | 2 cut(s) | 221, 811 |
| AvaI | CYCGRG | 1 cut(s) | 894 |
| AvaII | GGWCC | 4 cut(s) | 290, 485, 680, 837 |
| AvrII | CCTAGG | 1 cut(s) | 314 |
| BanI | GGYRCC | 1 cut(s) | 93 |
| BanII | GRGCYC | 1 cut(s) | 528 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 53, 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 528 |
| BbvI | GCAGC | 1 cut(s) | 1003 |
| BccI | CCATC | 5 cut(s) | 281, 358, 743, 824, 860 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 677, 711 |
| BciT130I | CCWGG | 2 cut(s) | 258, 630 |
| BcoDI | GTCTC | 1 cut(s) | 125 |
| BfaI | CTAG | 7 cut(s) | 315, 357, 561, 761, 797, 827, 972 |
| BfmI | CTRYAG | 2 cut(s) | 511, 696 |
| BfoI | RGCGCY | 1 cut(s) | 45 |
| BfuAI | ACCTGC | 1 cut(s) | 791 |
| BglII | AGATCT | 2 cut(s) | 147, 700 |
| BisI | GCNGC | 3 cut(s) | 236, 1017, 1025 |
| BlnI | CCTAGG | 1 cut(s) | 314 |
| BlsI | GCNGC | 3 cut(s) | 237, 1018, 1026 |
| Bme1390I | CCNGG | 2 cut(s) | 258, 630 |
| Bme18I | GGWCC | 4 cut(s) | 290, 485, 680, 837 |
| BmeT110I | CYCGRG | 1 cut(s) | 894 |
| BmgBI | CACGTC | 1 cut(s) | 90 |
| BmgT120I | GGNCC | 4 cut(s) | 290, 485, 680, 837 |
| BmiI | GGNNCC | 5 cut(s) | 95, 486, 538, 681, 839 |
| BmrFI | CCNGG | 2 cut(s) | 258, 630 |
| BmsI | GCATC | 3 cut(s) | 565, 781, 823 |
| BpmI | CTGGAG | 1 cut(s) | 303 |
| BpuEI | CTTGAG | 1 cut(s) | 539 |
| Bsa29I | ATCGAT | 1 cut(s) | 717 |
| BsaAI | YACGTR | 1 cut(s) | 270 |
| BsaI | GGTCTC | 1 cut(s) | 125 |
| BsaJI | CCNNGG | 2 cut(s) | 314, 893 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 244, 274, 488, 518 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 248, 368, 668, 898, 899 |
| Bse118I | RCCGGY | 1 cut(s) | 595 |
| Bse1I | ACTGG | 1 cut(s) | 286 |
| Bse3DI | GCAATG | 1 cut(s) | 590 |
| BseBI | CCWGG | 2 cut(s) | 258, 630 |
| BseCI | ATCGAT | 1 cut(s) | 717 |
| BseDI | CCNNGG | 2 cut(s) | 314, 893 |
| BseGI | GGATG | 3 cut(s) | 445, 754, 868 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 248, 368, 668, 898, 899 |
| BseMI | GCAATG | 1 cut(s) | 590 |
| BseMII | CTCAG | 3 cut(s) | 120, 144, 161 |
| BseNI | ACTGG | 1 cut(s) | 286 |
| BseRI | GAGGAG | 3 cut(s) | 396, 536, 896 |
| BseXI | GCAGC | 1 cut(s) | 1003 |
| BseYI | CCCAGC | 2 cut(s) | 110, 248 |
| BsgI | GTGCAG | 1 cut(s) | 1002 |
| Bsh1285I | CGRYCG | 1 cut(s) | 473 |
| BshFI | GGCC | 3 cut(s) | 158, 228, 256 |
| BshNI | GGYRCC | 1 cut(s) | 93 |
| BshVI | ATCGAT | 1 cut(s) | 717 |
| BsiEI | CGRYCG | 1 cut(s) | 473 |
| BsiHKAI | GWGCWC | 1 cut(s) | 528 |
| BsiHKCI | CYCGRG | 1 cut(s) | 894 |
| BsiSI | CCGG | 1 cut(s) | 596 |
| BslFI | GGGAC | 2 cut(s) | 498, 875 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 248, 368, 668, 898, 899 |
| BsmAI | GTCTC | 1 cut(s) | 125 |
| BsmFI | GGGAC | 2 cut(s) | 498, 875 |
| BsmI | GAATGC | 1 cut(s) | 325 |
| BsnI | GGCC | 3 cut(s) | 158, 228, 256 |
| Bso31I | GGTCTC | 1 cut(s) | 125 |
| BsoBI | CYCGRG | 1 cut(s) | 894 |
| Bsp1286I | GDGCHC | 1 cut(s) | 528 |
| Bsp143I | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| BspACI | CCGC | 4 cut(s) | 179, 236, 582, 1025 |
| BspANI | GGCC | 3 cut(s) | 158, 228, 256 |
| BspCNI | CTCAG | 3 cut(s) | 121, 145, 162 |
| BspDI | ATCGAT | 1 cut(s) | 717 |
| BspLI | GGNNCC | 5 cut(s) | 95, 486, 538, 681, 839 |
| BspMAI | CTGCAG | 1 cut(s) | 700 |
| BspMI | ACCTGC | 1 cut(s) | 791 |
| BspPI | GGATC | 4 cut(s) | 170, 612, 646, 914 |
| BspT107I | GGYRCC | 1 cut(s) | 93 |
| BspTNI | GGTCTC | 1 cut(s) | 125 |
| BsrDI | GCAATG | 1 cut(s) | 590 |
| BsrFI | RCCGGY | 1 cut(s) | 595 |
| BsrI | ACTGG | 1 cut(s) | 286 |
| BssAI | RCCGGY | 1 cut(s) | 595 |
| BssECI | CCNNGG | 2 cut(s) | 314, 893 |
| BssMI | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| BssT1I | CCWWGG | 1 cut(s) | 314 |
| Bst2UI | CCWGG | 2 cut(s) | 258, 630 |
| BstBAI | YACGTR | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 2 cut(s) | 580, 786 |
| BstDEI | CTNAG | 4 cut(s) | 129, 153, 170, 941 |
| BstF5I | GGATG | 3 cut(s) | 445, 754, 868 |
| BstH2I | RGCGCY | 1 cut(s) | 45 |
| BstHHI | GCGC | 1 cut(s) | 44 |
| BstKTI | GATC | 7 cut(s) | 150, 178, 419, 607, 654, 703, 922 |
| BstMAI | GTCTC | 1 cut(s) | 125 |
| BstMBI | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| BstMCI | CGRYCG | 1 cut(s) | 473 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 225 |
| BstNI | CCWGG | 2 cut(s) | 258, 630 |
| BstNSI | RCATGY | 1 cut(s) | 448 |
| BstSCI | CCNGG | 2 cut(s) | 256, 628 |
| BstSFI | CTRYAG | 2 cut(s) | 511, 696 |
| BstSNI | TACGTA | 1 cut(s) | 270 |
| BstV1I | GCAGC | 1 cut(s) | 1003 |
| BstX2I | RGATCY | 4 cut(s) | 147, 651, 700, 919 |
| BstYI | RGATCY | 4 cut(s) | 147, 651, 700, 919 |
| Bsu15I | ATCGAT | 1 cut(s) | 717 |
| BsuRI | GGCC | 3 cut(s) | 158, 228, 256 |
| BsuTUI | ATCGAT | 1 cut(s) | 717 |
| BtrI | CACGTC | 1 cut(s) | 90 |
| BtsCI | GGATG | 3 cut(s) | 445, 754, 868 |
| BveI | ACCTGC | 1 cut(s) | 791 |
| Cac8I | GCNNGC | 2 cut(s) | 580, 786 |
| CfoI | GCGC | 1 cut(s) | 44 |
| Cfr10I | RCCGGY | 1 cut(s) | 595 |
| Cfr13I | GGNCC | 4 cut(s) | 290, 485, 680, 837 |
| ClaI | ATCGAT | 1 cut(s) | 717 |
| CviAII | CATG | 2 cut(s) | 403, 445 |
| DdeI | CTNAG | 4 cut(s) | 129, 153, 170, 941 |
| DpnI | GATC | 7 cut(s) | 149, 177, 418, 606, 653, 702, 921 |
| DpnII | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 477 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 477 |
| Ecl136II | GAGCTC | 1 cut(s) | 526 |
| Eco105I | TACGTA | 1 cut(s) | 270 |
| Eco130I | CCWWGG | 1 cut(s) | 314 |
| Eco147I | AGGCCT | 2 cut(s) | 158, 256 |
| Eco24I | GRGCYC | 1 cut(s) | 528 |
| Eco31I | GGTCTC | 1 cut(s) | 125 |
| Eco47I | GGWCC | 4 cut(s) | 290, 485, 680, 837 |
| Eco53kI | GAGCTC | 1 cut(s) | 526 |
| Eco57I | CTGAAG | 1 cut(s) | 80 |
| Eco88I | CYCGRG | 1 cut(s) | 894 |
| EcoICRI | GAGCTC | 1 cut(s) | 526 |
| EcoO109I | RGGNCCY | 2 cut(s) | 485, 837 |
| EcoRII | CCWGG | 2 cut(s) | 256, 628 |
| EcoT14I | CCWWGG | 1 cut(s) | 314 |
| EcoT22I | ATGCAT | 1 cut(s) | 816 |
| EcoT38I | GRGCYC | 1 cut(s) | 528 |
| ErhI | CCWWGG | 1 cut(s) | 314 |
| FaeI | CATG | 2 cut(s) | 406, 448 |
| FaqI | GGGAC | 2 cut(s) | 498, 875 |
| FatI | CATG | 2 cut(s) | 402, 444 |
| FauI | CCCGC | 1 cut(s) | 575 |
| FauNDI | CATATG | 1 cut(s) | 244 |
| FblI | GTMKAC | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 3 cut(s) | 236, 1017, 1025 |
| FokI | GGATG | 3 cut(s) | 452, 761, 855 |
| FriOI | GRGCYC | 1 cut(s) | 528 |
| Fsp4HI | GCNGC | 3 cut(s) | 236, 1017, 1025 |
| FspBI | CTAG | 7 cut(s) | 315, 357, 561, 761, 797, 827, 972 |
| GlaI | GCGC | 1 cut(s) | 43 |
| GluI | GCNGC | 3 cut(s) | 236, 1017, 1025 |
| GsaI | CCCAGC | 2 cut(s) | 114, 252 |
| GsuI | CTGGAG | 1 cut(s) | 303 |
| HaeII | RGCGCY | 1 cut(s) | 45 |
| HaeIII | GGCC | 3 cut(s) | 158, 228, 256 |
| HapII | CCGG | 1 cut(s) | 596 |
| HhaI | GCGC | 1 cut(s) | 44 |
| Hin1II | CATG | 2 cut(s) | 406, 448 |
| Hin6I | GCGC | 1 cut(s) | 42 |
| HinP1I | GCGC | 1 cut(s) | 42 |
| HincII | GTYRAC | 2 cut(s) | 34, 978 |
| HindII | GTYRAC | 2 cut(s) | 34, 978 |
| HinfI | GANTC | 5 cut(s) | 306, 478, 979, 999, 1036 |
| HpaII | CCGG | 1 cut(s) | 596 |
| HphI | GGTGA | 2 cut(s) | 221, 811 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 741, 978 |
| Hpy188I | TCNGA | 4 cut(s) | 87, 154, 171, 470 |
| Hpy188III | TCNNGA | 3 cut(s) | 518, 896, 983 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 741, 978 |
| HpyAV | CCTTC | 5 cut(s) | 58, 209, 547, 925, 985 |
| HpyCH4IV | ACGT | 3 cut(s) | 89, 269, 737 |
| HpyCH4V | TGCA | 5 cut(s) | 572, 578, 698, 814, 1019 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 225 |
| HpyF3I | CTNAG | 4 cut(s) | 129, 153, 170, 941 |
| HpySE526I | ACGT | 3 cut(s) | 89, 269, 737 |
| Hsp92II | CATG | 2 cut(s) | 406, 448 |
| HspAI | GCGC | 1 cut(s) | 42 |
| Kzo9I | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| LmnI | GCTCC | 1 cut(s) | 523 |
| Lsp1109I | GCAGC | 1 cut(s) | 1003 |
| LweI | GCATC | 3 cut(s) | 565, 781, 823 |
| MaeI | CTAG | 7 cut(s) | 315, 357, 561, 761, 797, 827, 972 |
| MaeII | ACGT | 3 cut(s) | 89, 269, 737 |
| MaeIII | GTNAC | 2 cut(s) | 766, 803 |
| MalI | GATC | 7 cut(s) | 149, 177, 418, 606, 653, 702, 921 |
| MboI | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| MboII | GAAGA | 6 cut(s) | 62, 73, 224, 426, 559, 929 |
| MflI | RGATCY | 4 cut(s) | 147, 651, 700, 919 |
| MhlI | GDGCHC | 1 cut(s) | 528 |
| MluCI | AATT | 7 cut(s) | 77, 137, 330, 567, 950, 962, 1057 |
| MlyI | GAGTC | 2 cut(s) | 487, 973 |
| MmeI | TCCRAC | 2 cut(s) | 493, 992 |
| Mph1103I | ATGCAT | 1 cut(s) | 816 |
| MseI | TTAA | 2 cut(s) | 347, 611 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspI | CCGG | 1 cut(s) | 596 |
| MspR9I | CCNGG | 2 cut(s) | 258, 630 |
| Mva1269I | GAATGC | 1 cut(s) | 325 |
| MvaI | CCWGG | 2 cut(s) | 258, 630 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 225 |
| NdeI | CATATG | 1 cut(s) | 244 |
| NdeII | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| NlaIII | CATG | 2 cut(s) | 406, 448 |
| NlaIV | GGNNCC | 5 cut(s) | 95, 486, 538, 681, 839 |
| NsiI | ATGCAT | 1 cut(s) | 816 |
| NspI | RCATGY | 1 cut(s) | 448 |
| PceI | AGGCCT | 2 cut(s) | 158, 256 |
| PciI | ACATGT | 1 cut(s) | 444 |
| PctI | GAATGC | 1 cut(s) | 325 |
| PfeI | GAWTC | 3 cut(s) | 306, 999, 1036 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 248 |
| PkrI | GCNGC | 3 cut(s) | 237, 1018, 1026 |
| PleI | GAGTC | 2 cut(s) | 486, 973 |
| PpsI | GAGTC | 2 cut(s) | 486, 973 |
| Ppu21I | YACGTR | 1 cut(s) | 270 |
| PpuMI | RGGWCCY | 2 cut(s) | 485, 837 |
| PscI | ACATGT | 1 cut(s) | 444 |
| Psp124BI | GAGCTC | 1 cut(s) | 528 |
| Psp5II | RGGWCCY | 2 cut(s) | 485, 837 |
| Psp6I | CCWGG | 2 cut(s) | 256, 628 |
| PspFI | CCCAGC | 2 cut(s) | 110, 248 |
| PspGI | CCWGG | 2 cut(s) | 256, 628 |
| PspN4I | GGNNCC | 5 cut(s) | 95, 486, 538, 681, 839 |
| PspPI | GGNCC | 4 cut(s) | 290, 485, 680, 837 |
| PspPPI | RGGWCCY | 2 cut(s) | 485, 837 |
| PstI | CTGCAG | 1 cut(s) | 700 |
| PsuI | RGATCY | 4 cut(s) | 147, 651, 700, 919 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SacI | GAGCTC | 1 cut(s) | 528 |
| SalI | GTCGAC | 1 cut(s) | 32 |
| SaqAI | TTAA | 2 cut(s) | 347, 611 |
| SatI | GCNGC | 3 cut(s) | 236, 1017, 1025 |
| Sau3AI | GATC | 7 cut(s) | 147, 175, 416, 604, 651, 700, 919 |
| Sau96I | GGNCC | 4 cut(s) | 290, 485, 680, 837 |
| SchI | GAGTC | 2 cut(s) | 487, 973 |
| ScrFI | CCNGG | 2 cut(s) | 258, 630 |
| SduI | GDGCHC | 1 cut(s) | 528 |
| SfaNI | GCATC | 3 cut(s) | 565, 781, 823 |
| SfcI | CTRYAG | 2 cut(s) | 511, 696 |
| SinI | GGWCC | 4 cut(s) | 290, 485, 680, 837 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| SmlI | CTYRAG | 1 cut(s) | 518 |
| SmoI | CTYRAG | 1 cut(s) | 518 |
| SnaBI | TACGTA | 1 cut(s) | 270 |
| Sse9I | AATT | 7 cut(s) | 77, 137, 330, 567, 950, 962, 1057 |
| SseBI | AGGCCT | 2 cut(s) | 158, 256 |
| SsiI | CCGC | 4 cut(s) | 179, 236, 582, 1025 |
| SspMI | CTAG | 7 cut(s) | 315, 357, 561, 761, 797, 827, 972 |
| SstI | GAGCTC | 1 cut(s) | 528 |
| StuI | AGGCCT | 2 cut(s) | 158, 256 |
| StyD4I | CCNGG | 2 cut(s) | 256, 628 |
| StyI | CCWWGG | 1 cut(s) | 314 |
| TaiI | ACGT | 3 cut(s) | 92, 272, 740 |
| TaqI | TCGA | 3 cut(s) | 33, 717, 1034 |
| TaqII | GACCGA | 1 cut(s) | 487 |
| TasI | AATT | 7 cut(s) | 77, 137, 330, 567, 950, 962, 1057 |
| TauI | GCSGC | 2 cut(s) | 238, 1027 |
| TfiI | GAWTC | 3 cut(s) | 306, 999, 1036 |
| Tru1I | TTAA | 2 cut(s) | 347, 611 |
| Tru9I | TTAA | 2 cut(s) | 347, 611 |
| TseI | GCWGC | 1 cut(s) | 1016 |
| TspDTI | ATGAA | 4 cut(s) | 69, 566, 700, 857 |
| TspGWI | ACGGA | 1 cut(s) | 850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 248 |
| VpaK11BI | GGWCC | 4 cut(s) | 290, 485, 680, 837 |
| XapI | RAATTY | 5 cut(s) | 137, 330, 950, 962, 1057 |
| XceI | RCATGY | 1 cut(s) | 448 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 331 |
| XmaJI | CCTAGG | 1 cut(s) | 314 |
| XmiI | GTMKAC | 1 cut(s) | 33 |
| XspI | CTAG | 7 cut(s) | 315, 357, 561, 761, 797, 827, 972 |
| Zsp2I | ATGCAT | 1 cut(s) | 816 |