RLG00000031634

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
6923747 .. 6925682
1936 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031634

Sequence Viewer

Length: 1035 bp
ATGGGTGTAGATTACTACAAGCTTTTACAGGTAGACAAGAGCGCCACAGAAGATGAACTGAAGAAGGCTTACAGAAAATTGGCTATGAAGTGGCACCCTGATAAGAACCCCACCAATAAGAAAGATGCTGAGACCAAATTCAAGCAGATCTCTGAGGCCTATGAGGTTCTGAGTGATCCACAGAAAAGAGCAATCTATGATCAGTATGGTGAAGAAGGCCTTAAAGGCGGAATGCCGCCTCCAGATGCTGGGGGGCCTGGTGGTGCCACGTATTTCCAAACTGGAGATGGTCCAAATGTGTTTAGATTCAACCCTAGGAATGCCAACGACATTTTTGCGGAGATCTTCGGGTTTTCTAGCCCGATGGGTGGTGGAATGGGAGGAGGTGGTTTTGGTAGTGGCATGAGGGGTGGAAGATCCTTTGGTGGAATGTTTGGGGATGACATGTTTAGTTCTTTTGGAGAAGGCCGGCCGATGAGTCAGGGACCAAGAAAAGCTTCTCCTTTGGAGAGGAAGTTGCCATGTAGTCTTGAGGAGCTCTATAAGGGAACCACAAAGAAGATGAAGATATCTAGGGAAATTGCAGATGCAAGTGGGAGGACATTGCCGGTGGAGGAAATCTTAACCATTGAGGTCAAGCCTGGCTGGAAAAAAGGAACAAAGATCACTTTCCCAGAGAAAGGGAATGAGCGTCCAAATGAAGTTCCTGCGGATCTTATATTCATAATCGATGAGAAACCACACAGCACATTCACAAGGGATGGGAACGACCTGGTGGTAACACAGAAGATCTCGCTGGCAGAAGCACTAGCAGGTTACACTCTGCATCTCACCACACTAGATGGGAGGACCCTCACCATCCCCATCAACACTGTCATTCATCCAAACTACGAGGAGATAGTCCCTCGGGAGGGTATGCCTATACCAAAAGATCCCTCCAAGAAGGGCAACCTTAGAGTGAAATTCAACATCAAATTTCCAACTAGGTTGACTTCTGAACAGAAGGCTGGAATCAAGAAACTTTTGGCTGCATAA

Protein Analysis

345

Amino Acids

37.84

Weight (kDa)

9.15

Isoelectric Point (pI)

36.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 67 1.8e-28 DnaJ domain
DnaJ_C PF01556 170 - 327 1.6e-39 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 803
AccB1I GGYRCC 2 cut(s) 93, 263
AccB7I CCANNNNNTGG 1 cut(s) 248
AccI GTMKAC 1 cut(s) 33
AciI CCGC 4 cut(s) 228, 236, 338, 710
AclWI GGATC 4 cut(s) 170, 411, 720, 926
AcoI YGGCCR 1 cut(s) 470
AcsI RAATTY 3 cut(s) 137, 962, 974
AcuI CTGAAG 1 cut(s) 80
AfiI CCNNNNNNNGG 5 cut(s) 248, 368, 680, 910, 911
AflIII ACRYGT 1 cut(s) 444
AgsI TTSAA 3 cut(s) 142, 310, 967
AjnI CCWGG 3 cut(s) 256, 640, 771
AjuI GAANNNNNNNTTGG 2 cut(s) 481, 513
AluBI AGCT 3 cut(s) 22, 497, 538
AluI AGCT 3 cut(s) 22, 497, 538
Alw21I GWGCWC 1 cut(s) 540
Alw26I GTCTC 1 cut(s) 125
AlwI GGATC 4 cut(s) 170, 411, 720, 926
AlwNI CAGNNNCTG 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 906
AoxI GGCC 5 cut(s) 156, 217, 254, 466, 470
ApeKI GCWGC 1 cut(s) 1028
ApoI RAATTY 3 cut(s) 137, 962, 974
Asp700I GAANNNNTTC 1 cut(s) 496
AspA2I CCTAGG 1 cut(s) 314
AspLEI GCGC 1 cut(s) 44
AspS9I GGNCC 4 cut(s) 254, 290, 485, 849
AsuHPI GGTGA 3 cut(s) 221, 823, 847
AvaI CYCGRG 1 cut(s) 906
AvaII GGWCC 3 cut(s) 290, 485, 849
AvrII CCTAGG 1 cut(s) 314
BanI GGYRCC 2 cut(s) 93, 263
BanII GRGCYC 1 cut(s) 540
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
Bbv12I GWGCWC 1 cut(s) 540
BbvI GCAGC 1 cut(s) 1015
BccI CCATC 6 cut(s) 281, 358, 755, 836, 866, 872
BcgI CGANNNNNNTGC 2 cut(s) 317, 351
BciT130I CCWGG 3 cut(s) 258, 642, 773
BclI TGATCA 1 cut(s) 199
BcoDI GTCTC 1 cut(s) 125
BfaI CTAG 6 cut(s) 315, 357, 573, 809, 839, 984
BfoI RGCGCY 1 cut(s) 45
BfuAI ACCTGC 1 cut(s) 803
BglI GCCNNNNNGGC 1 cut(s) 225
BglII AGATCT 3 cut(s) 147, 342, 789
BisI GCNGC 2 cut(s) 236, 1029
BlnI CCTAGG 1 cut(s) 314
BlsI GCNGC 2 cut(s) 237, 1030
Bme1390I CCNGG 3 cut(s) 258, 642, 773
Bme18I GGWCC 3 cut(s) 290, 485, 849
BmeT110I CYCGRG 1 cut(s) 906
BmgT120I GGNCC 4 cut(s) 254, 290, 485, 849
BmiI GGNNCC 6 cut(s) 95, 255, 265, 486, 550, 851
BmrFI CCNGG 3 cut(s) 258, 642, 773
BmsI GCATC 4 cut(s) 115, 235, 577, 835
BpmI CTGGAG 2 cut(s) 225, 303
BpuEI CTTGAG 1 cut(s) 551
Bsa29I ATCGAT 1 cut(s) 729
BsaAI YACGTR 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 2 cut(s) 314, 905
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 5 cut(s) 248, 368, 680, 910, 911
Bse118I RCCGGY 2 cut(s) 468, 607
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 602
BseBI CCWGG 3 cut(s) 258, 642, 773
BseCI ATCGAT 1 cut(s) 729
BseDI CCNNGG 2 cut(s) 314, 905
BseGI GGATG 4 cut(s) 445, 766, 858, 880
BseLI CCNNNNNNNGG 5 cut(s) 248, 368, 680, 910, 911
BseMI GCAATG 1 cut(s) 602
BseMII CTCAG 3 cut(s) 120, 144, 161
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 3 cut(s) 396, 548, 908
BseX3I CGGCCG 1 cut(s) 470
BseXI GCAGC 1 cut(s) 1015
BseYI CCCAGC 1 cut(s) 248
Bsh1285I CGRYCG 1 cut(s) 473
BshFI GGCC 5 cut(s) 158, 219, 256, 468, 472
BshNI GGYRCC 2 cut(s) 93, 263
BshVI ATCGAT 1 cut(s) 729
BsiEI CGRYCG 1 cut(s) 473
BsiHKAI GWGCWC 1 cut(s) 540
BsiHKCI CYCGRG 1 cut(s) 906
BsiSI CCGG 2 cut(s) 469, 608
BslFI GGGAC 2 cut(s) 498, 887
BslI CCNNNNNNNGG 5 cut(s) 248, 368, 680, 910, 911
BsmAI GTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 498, 887
BsmI GAATGC 2 cut(s) 237, 325
BsnI GGCC 5 cut(s) 158, 219, 256, 468, 472
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 906
Bsp1286I GDGCHC 1 cut(s) 540
Bsp143I GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
BspACI CCGC 4 cut(s) 228, 236, 338, 710
BspANI GGCC 5 cut(s) 158, 219, 256, 468, 472
BspCNI CTCAG 3 cut(s) 121, 145, 162
BspDI ATCGAT 1 cut(s) 729
BspLI GGNNCC 6 cut(s) 95, 255, 265, 486, 550, 851
BspMI ACCTGC 1 cut(s) 803
BspPI GGATC 4 cut(s) 170, 411, 720, 926
BspT107I GGYRCC 2 cut(s) 93, 263
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 602
BsrFI RCCGGY 2 cut(s) 468, 607
BsrI ACTGG 1 cut(s) 286
BssAI RCCGGY 2 cut(s) 468, 607
BssECI CCNNGG 2 cut(s) 314, 905
BssMI GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
BssT1I CCWWGG 1 cut(s) 314
Bst2UI CCWGG 3 cut(s) 258, 642, 773
Bst4CI ACNGT 1 cut(s) 874
BstBAI YACGTR 1 cut(s) 270
BstC8I GCNNGC 2 cut(s) 470, 798
BstDEI CTNAG 4 cut(s) 129, 153, 170, 953
BstF5I GGATG 4 cut(s) 445, 766, 858, 880
BstH2I RGCGCY 1 cut(s) 45
BstHHI GCGC 1 cut(s) 44
BstKTI GATC 9 cut(s) 150, 178, 202, 345, 419, 666, 715, 792, 934
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
BstMCI CGRYCG 1 cut(s) 473
BstMWI GCNNNNNNNGC 1 cut(s) 225
BstNI CCWGG 3 cut(s) 258, 642, 773
BstNSI RCATGY 1 cut(s) 448
BstSCI CCNGG 3 cut(s) 256, 640, 771
BstV1I GCAGC 1 cut(s) 1015
BstX2I RGATCY 6 cut(s) 147, 342, 416, 712, 789, 931
BstYI RGATCY 6 cut(s) 147, 342, 416, 712, 789, 931
BstZI CGGCCG 1 cut(s) 470
Bsu15I ATCGAT 1 cut(s) 729
BsuRI GGCC 5 cut(s) 158, 219, 256, 468, 472
BsuTUI ATCGAT 1 cut(s) 729
BtsCI GGATG 4 cut(s) 445, 766, 858, 880
BtsIMutI CAGTG 1 cut(s) 870
BveI ACCTGC 1 cut(s) 803
Cac8I GCNNGC 2 cut(s) 470, 798
CaiI CAGNNNCTG 1 cut(s) 248
CfoI GCGC 1 cut(s) 44
Cfr10I RCCGGY 2 cut(s) 468, 607
Cfr13I GGNCC 4 cut(s) 254, 290, 485, 849
ClaI ATCGAT 1 cut(s) 729
CseI GACGC 1 cut(s) 680
CsiI ACCWGGT 1 cut(s) 771
CviAII CATG 3 cut(s) 403, 445, 522
DdeI CTNAG 4 cut(s) 129, 153, 170, 953
DpnI GATC 9 cut(s) 149, 177, 201, 344, 418, 665, 714, 791, 933
DpnII GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
EaeI YGGCCR 1 cut(s) 470
EagI CGGCCG 1 cut(s) 470
EciI GGCGGA 1 cut(s) 243
Ecl136II GAGCTC 1 cut(s) 538
EclXI CGGCCG 1 cut(s) 470
Eco130I CCWWGG 1 cut(s) 314
Eco147I AGGCCT 2 cut(s) 158, 219
Eco24I GRGCYC 1 cut(s) 540
Eco31I GGTCTC 1 cut(s) 125
Eco32I GATATC 1 cut(s) 570
Eco47I GGWCC 3 cut(s) 290, 485, 849
Eco52I CGGCCG 1 cut(s) 470
Eco53kI GAGCTC 1 cut(s) 538
Eco57I CTGAAG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 906
EcoICRI GAGCTC 1 cut(s) 538
EcoO109I RGGNCCY 2 cut(s) 254, 849
EcoRII CCWGG 3 cut(s) 256, 640, 771
EcoRV GATATC 1 cut(s) 570
EcoT14I CCWWGG 1 cut(s) 314
EcoT38I GRGCYC 1 cut(s) 540
ErhI CCWWGG 1 cut(s) 314
FaeI CATG 3 cut(s) 406, 448, 525
FalI AAGNNNNNCTT 4 cut(s) 204, 236, 481, 513
FaqI GGGAC 2 cut(s) 498, 887
FatI CATG 3 cut(s) 402, 444, 521
FbaI TGATCA 1 cut(s) 199
FblI GTMKAC 1 cut(s) 33
Fnu4HI GCNGC 2 cut(s) 236, 1029
FokI GGATG 4 cut(s) 452, 773, 845, 867
FriOI GRGCYC 1 cut(s) 540
FseI GGCCGGCC 1 cut(s) 472
Fsp4HI GCNGC 2 cut(s) 236, 1029
FspBI CTAG 6 cut(s) 315, 357, 573, 809, 839, 984
GlaI GCGC 1 cut(s) 43
GluI GCNGC 2 cut(s) 236, 1029
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 2 cut(s) 225, 303
HaeII RGCGCY 1 cut(s) 45
HaeIII GGCC 5 cut(s) 158, 219, 256, 468, 472
HapII CCGG 2 cut(s) 469, 608
HgaI GACGC 1 cut(s) 680
HhaI GCGC 1 cut(s) 44
Hin1II CATG 3 cut(s) 406, 448, 525
Hin6I GCGC 1 cut(s) 42
HinP1I GCGC 1 cut(s) 42
HincII GTYRAC 1 cut(s) 990
HindII GTYRAC 1 cut(s) 990
HindIII AAGCTT 2 cut(s) 20, 495
HinfI GANTC 3 cut(s) 306, 478, 1011
HpaII CCGG 2 cut(s) 469, 608
HphI GGTGA 3 cut(s) 221, 823, 847
Hpy166II GTNNAC 2 cut(s) 34, 990
Hpy188I TCNGA 3 cut(s) 154, 171, 997
Hpy188III TCNNGA 4 cut(s) 242, 530, 908, 1015
Hpy8I GTNNAC 2 cut(s) 34, 990
HpyAV CCTTC 5 cut(s) 58, 209, 458, 937, 997
HpyCH4III ACNGT 1 cut(s) 874
HpyCH4IV ACGT 1 cut(s) 269
HpyCH4V TGCA 4 cut(s) 584, 590, 826, 1031
HpyF10VI GCNNNNNNNGC 1 cut(s) 225
HpyF3I CTNAG 4 cut(s) 129, 153, 170, 953
HpySE526I ACGT 1 cut(s) 269
Hsp92II CATG 3 cut(s) 406, 448, 525
HspAI GCGC 1 cut(s) 42
KroI GCCGGC 1 cut(s) 468
KroNI GCCGGC 1 cut(s) 470
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
LmnI GCTCC 1 cut(s) 535
Lsp1109I GCAGC 1 cut(s) 1015
LweI GCATC 4 cut(s) 115, 235, 577, 835
MabI ACCWGGT 1 cut(s) 771
MaeI CTAG 6 cut(s) 315, 357, 573, 809, 839, 984
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 2 cut(s) 778, 815
MalI GATC 9 cut(s) 149, 177, 201, 344, 418, 665, 714, 791, 933
MboI GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
MboII GAAGA 8 cut(s) 62, 73, 224, 337, 426, 571, 577, 799
MflI RGATCY 6 cut(s) 147, 342, 416, 712, 789, 931
MhlI GDGCHC 1 cut(s) 540
MluCI AATT 5 cut(s) 77, 137, 579, 962, 974
MlyI GAGTC 1 cut(s) 487
MmeI TCCRAC 1 cut(s) 1004
MroNI GCCGGC 1 cut(s) 468
MroXI GAANNNNTTC 1 cut(s) 496
MseI TTAA 2 cut(s) 222, 623
MspI CCGG 2 cut(s) 469, 608
MspR9I CCNGG 3 cut(s) 258, 642, 773
Mva1269I GAATGC 2 cut(s) 237, 325
MvaI CCWGG 3 cut(s) 258, 642, 773
MwoI GCNNNNNNNGC 1 cut(s) 225
NaeI GCCGGC 1 cut(s) 470
NdeII GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
NgoMIV GCCGGC 1 cut(s) 468
NlaIII CATG 3 cut(s) 406, 448, 525
NlaIV GGNNCC 6 cut(s) 95, 255, 265, 486, 550, 851
NspI RCATGY 1 cut(s) 448
PceI AGGCCT 2 cut(s) 158, 219
PciI ACATGT 1 cut(s) 444
PctI GAATGC 2 cut(s) 237, 325
PdiI GCCGGC 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 496
PfeI GAWTC 2 cut(s) 306, 1011
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 2 cut(s) 237, 1030
PleI GAGTC 1 cut(s) 486
PpsI GAGTC 1 cut(s) 486
Ppu21I YACGTR 1 cut(s) 270
PpuMI RGGWCCY 1 cut(s) 849
PscI ACATGT 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 540
Psp5II RGGWCCY 1 cut(s) 849
Psp6I CCWGG 3 cut(s) 256, 640, 771
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 3 cut(s) 256, 640, 771
PspN4I GGNNCC 6 cut(s) 95, 255, 265, 486, 550, 851
PspPI GGNCC 4 cut(s) 254, 290, 485, 849
PspPPI RGGWCCY 1 cut(s) 849
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 6 cut(s) 147, 342, 416, 712, 789, 931
RigI GGCCGGCC 1 cut(s) 472
SacI GAGCTC 1 cut(s) 540
SaqAI TTAA 2 cut(s) 222, 623
SatI GCNGC 2 cut(s) 236, 1029
Sau3AI GATC 9 cut(s) 147, 175, 199, 342, 416, 663, 712, 789, 931
Sau96I GGNCC 4 cut(s) 254, 290, 485, 849
SchI GAGTC 1 cut(s) 487
ScrFI CCNGG 3 cut(s) 258, 642, 773
SduI GDGCHC 1 cut(s) 540
SexAI ACCWGGT 1 cut(s) 771
SfaNI GCATC 4 cut(s) 115, 235, 577, 835
SinI GGWCC 3 cut(s) 290, 485, 849
SmlI CTYRAG 1 cut(s) 530
SmoI CTYRAG 1 cut(s) 530
Sse9I AATT 5 cut(s) 77, 137, 579, 962, 974
SseBI AGGCCT 2 cut(s) 158, 219
SsiI CCGC 4 cut(s) 228, 236, 338, 710
SspMI CTAG 6 cut(s) 315, 357, 573, 809, 839, 984
SstI GAGCTC 1 cut(s) 540
StuI AGGCCT 2 cut(s) 158, 219
StyD4I CCNGG 3 cut(s) 256, 640, 771
StyI CCWWGG 1 cut(s) 314
TaaI ACNGT 1 cut(s) 874
TaiI ACGT 1 cut(s) 272
TaqI TCGA 1 cut(s) 729
TasI AATT 5 cut(s) 77, 137, 579, 962, 974
TauI GCSGC 1 cut(s) 238
TfiI GAWTC 2 cut(s) 306, 1011
Tru1I TTAA 2 cut(s) 222, 623
Tru9I TTAA 2 cut(s) 222, 623
TscAI CASTG 1 cut(s) 877
TseI GCWGC 1 cut(s) 1028
TspDTI ATGAA 6 cut(s) 69, 101, 578, 712, 714, 869
TspRI CASTG 1 cut(s) 877
Van91I CCANNNNNTGG 1 cut(s) 248
VpaK11BI GGWCC 3 cut(s) 290, 485, 849
XapI RAATTY 3 cut(s) 137, 962, 974
XceI RCATGY 1 cut(s) 448
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XmaJI CCTAGG 1 cut(s) 314
XmiI GTMKAC 1 cut(s) 33
XmnI GAANNNNTTC 1 cut(s) 496
XspI CTAG 6 cut(s) 315, 357, 573, 809, 839, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.