pycom10g24180

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
26070760 .. 26072527
1768 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g24180.2

Sequence Viewer

Length: 1038 bp
ATGGGTGTGGATTACTACAAGCTTCTGCAGGTGGACAAGAACGCCAGCGATGACGATTTGAAGAAAGCTTACAGAAAGCTCGCCATGAAGTGGCACCCTGATAAGAACCCCACCAACAAGAAGGAAGCCGAGTCCAAGTTCAAACAGATCTCTGAGGCCTACGAGGTTCTGAGTGATCGACCCAGAAAAGAGCAATTTATCGATCAATACGGAGAAGAAGGACTGAAAGGCCAAGTGCCGCCGCCGGATGCCGGTGGGCCTGGCGGTGGAGCTACCTTCTTCCAAACCGGGGACGGTCCAAATGTGTTTAGATTCAACCCCAGAAACGCCGACGACATTTTTGCTGATTTCTTTGGGTTCTCGAGCCCCATGGGTGGAATGGGAGGCGGAATGGGCGGTGGCGGCATGAGGGGTGGAAGGTCTTTTGGTGGAATGTTTGGGGAGGACGTGTTTAGTTCATTCGGAGAAGGCCGGCCCATGAGTCATGCGCCACGAAAAGCTCCACCTATAGAGAAGAGGCTGCCTTGTAGCCTTGAGGAGCTGTACAAGGGGACTACCAAGAAGATGAAGATTTCGAGGGAAATCGCAGATGCAAGCGGGAAGACCATGCAAGTGGAGGAAATACTAACCATAGAAATCAAGCCTGGCTGGAAAAAGGGAACCAAAATCACCTTCCCGGAGAAAGGGAACGAGCAAGGAAACATAACTCCTGCGGATCTTGTGTTCATAATCGATGAGAAACCACACAGCACATTCACAAGGGATGGGAACGATCTTATTGTCACGCAGAGGATTACTCTAGCAGAAGCTCTAACAGGCTACACTGTCCGCCTGACCACCCTAGATGGAAGGAGCCTCACCATCCCCATCAACAATGTGATTAGCCCAGACTATGAGGAGGTAGTCCCTAGGGAGGGAATGCCCGTACCGAAAGACCCCTCCAAGAAGGGTAACCTCAGAATTAAATTCAACATCAAGTTTCCGACAAGATTGACTGCCGAACAGAAGGCCGGAATTAAGAAATGCTTGCCGGCTTGA

Protein Analysis

346

Amino Acids

38.0

Weight (kDa)

9.02

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 19
Acc36I ACCTGC 1 cut(s) 19
AccB1I GGYRCC 1 cut(s) 93
AccB7I CCANNNNNTGG 1 cut(s) 90
AciI CCGC 9 cut(s) 239, 242, 264, 387, 396, 402, 597, 713, 829
AclWI GGATC 1 cut(s) 723
AcsI RAATTY 1 cut(s) 965
AfaI GTAC 2 cut(s) 545, 927
AfiI CCNNNNNNNGG 8 cut(s) 90, 251, 266, 289, 374, 683, 913, 914
AflIII ACRYGT 1 cut(s) 447
AgsI TTSAA 4 cut(s) 61, 142, 316, 970
AjiI CACGTC 1 cut(s) 448
AjnI CCWGG 2 cut(s) 259, 643
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
AloI GAACNNNNNNTCC 2 cut(s) 707, 739
AluBI AGCT 7 cut(s) 22, 68, 79, 272, 500, 541, 809
AluI AGCT 7 cut(s) 22, 68, 79, 272, 500, 541, 809
AlwI GGATC 1 cut(s) 723
Ama87I CYCGRG 1 cut(s) 361
AoxI GGCC 6 cut(s) 156, 229, 257, 469, 473, 1008
ApeKI GCWGC 1 cut(s) 520
ApoI RAATTY 1 cut(s) 965
ArsI GACNNNNNNTTYG 2 cut(s) 323, 355
AspA2I CCTAGG 1 cut(s) 908
AspLEI GCGC 1 cut(s) 490
AspS9I GGNCC 3 cut(s) 257, 296, 474
AsuC2I CCSGG 2 cut(s) 289, 677
AsuHPI GGTGA 2 cut(s) 661, 850
AvaI CYCGRG 1 cut(s) 361
AvaII GGWCC 1 cut(s) 296
AvrII CCTAGG 1 cut(s) 908
BanI GGYRCC 1 cut(s) 93
BanII GRGCYC 1 cut(s) 368
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
BbsI GAAGAC 1 cut(s) 608
BbvI GCAGC 1 cut(s) 507
BccI CCATC 4 cut(s) 758, 839, 869, 875
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciT130I CCWGG 2 cut(s) 261, 645
BcnI CCSGG 2 cut(s) 289, 677
BfaI CTAG 3 cut(s) 800, 842, 909
BfmI CTRYAG 2 cut(s) 26, 507
BfuAI ACCTGC 1 cut(s) 19
BglII AGATCT 1 cut(s) 147
BisI GCNGC 4 cut(s) 239, 242, 403, 521
BlnI CCTAGG 1 cut(s) 908
BlsI GCNGC 4 cut(s) 240, 243, 404, 522
Bme1390I CCNGG 4 cut(s) 261, 289, 645, 677
Bme18I GGWCC 1 cut(s) 296
BmeT110I CYCGRG 1 cut(s) 361
BmgBI CACGTC 1 cut(s) 448
BmgT120I GGNCC 3 cut(s) 257, 296, 474
BmiI GGNNCC 3 cut(s) 95, 661, 854
BmrFI CCNGG 4 cut(s) 261, 289, 645, 677
BmsI GCATC 2 cut(s) 238, 580
BpiI GAAGAC 1 cut(s) 608
BplI GAGNNNNNCTC 2 cut(s) 781, 813
BpuEI CTTGAG 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 289, 677
Bsa29I ATCGAT 2 cut(s) 201, 732
BsaJI CCNNGG 3 cut(s) 288, 369, 908
BsaXI ACNNNNNCTCC 2 cut(s) 434, 464
Bsc4I CCNNNNNNNGG 8 cut(s) 90, 251, 266, 289, 374, 683, 913, 914
Bse118I RCCGGY 3 cut(s) 251, 471, 1030
BseBI CCWGG 2 cut(s) 261, 645
BseCI ATCGAT 2 cut(s) 201, 732
BseDI CCNNGG 3 cut(s) 288, 369, 908
BseGI GGATG 3 cut(s) 253, 769, 861
BseLI CCNNNNNNNGG 8 cut(s) 90, 251, 266, 289, 374, 683, 913, 914
BseMII CTCAG 3 cut(s) 144, 161, 970
BseRI GAGGAG 2 cut(s) 551, 911
BseXI GCAGC 1 cut(s) 507
BshFI GGCC 6 cut(s) 158, 231, 259, 471, 475, 1010
BshNI GGYRCC 1 cut(s) 93
BshVI ATCGAT 2 cut(s) 201, 732
BsiHKCI CYCGRG 1 cut(s) 361
BsiSI CCGG 7 cut(s) 245, 252, 288, 472, 677, 1011, 1031
BslFI GGGAC 3 cut(s) 305, 565, 890
BslI CCNNNNNNNGG 8 cut(s) 90, 251, 266, 289, 374, 683, 913, 914
BsmFI GGGAC 3 cut(s) 305, 565, 890
BsmI GAATGC 1 cut(s) 924
BsnI GGCC 6 cut(s) 158, 231, 259, 471, 475, 1010
BsoBI CYCGRG 1 cut(s) 361
Bsp1286I GDGCHC 1 cut(s) 368
Bsp1407I TGTACA 1 cut(s) 543
Bsp143I GATC 5 cut(s) 147, 175, 202, 715, 772
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 9 cut(s) 239, 242, 264, 387, 396, 402, 597, 713, 829
BspANI GGCC 6 cut(s) 158, 231, 259, 471, 475, 1010
BspCNI CTCAG 3 cut(s) 145, 162, 969
BspDI ATCGAT 2 cut(s) 201, 732
BspLI GGNNCC 3 cut(s) 95, 661, 854
BspMAI CTGCAG 1 cut(s) 30
BspMI ACCTGC 1 cut(s) 19
BspPI GGATC 1 cut(s) 723
BspT107I GGYRCC 1 cut(s) 93
BsrFI RCCGGY 3 cut(s) 251, 471, 1030
BsrGI TGTACA 1 cut(s) 543
BssAI RCCGGY 3 cut(s) 251, 471, 1030
BssECI CCNNGG 3 cut(s) 288, 369, 908
BssMI GATC 5 cut(s) 147, 175, 202, 715, 772
BssT1I CCWWGG 2 cut(s) 369, 908
Bst2UI CCWGG 2 cut(s) 261, 645
Bst4CI ACNGT 2 cut(s) 296, 826
Bst6I CTCTTC 1 cut(s) 509
BstAUI TGTACA 1 cut(s) 543
BstC8I GCNNGC 6 cut(s) 46, 81, 473, 595, 1028, 1032
BstDEI CTNAG 3 cut(s) 153, 170, 956
BstDSI CCRYGG 1 cut(s) 369
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 3 cut(s) 253, 769, 861
BstHHI GCGC 1 cut(s) 490
BstKTI GATC 5 cut(s) 150, 178, 205, 718, 775
BstMBI GATC 5 cut(s) 147, 175, 202, 715, 772
BstMWI GCNNNNNNNGC 2 cut(s) 393, 402
BstNI CCWGG 2 cut(s) 261, 645
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 259, 287, 643, 675
BstSFI CTRYAG 2 cut(s) 26, 507
BstV1I GCAGC 1 cut(s) 507
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 2 cut(s) 147, 715
BstXI CCANNNNNNTGG 1 cut(s) 613
BstYI RGATCY 2 cut(s) 147, 715
Bsu15I ATCGAT 2 cut(s) 201, 732
BsuRI GGCC 6 cut(s) 158, 231, 259, 471, 475, 1010
BsuTUI ATCGAT 2 cut(s) 201, 732
BtgI CCRYGG 1 cut(s) 369
BtgZI GCGATG 1 cut(s) 63
BtrI CACGTC 1 cut(s) 448
BtsCI GGATG 3 cut(s) 253, 769, 861
BtsIMutI CAGTG 1 cut(s) 822
BveI ACCTGC 1 cut(s) 19
Cac8I GCNNGC 6 cut(s) 46, 81, 473, 595, 1028, 1032
CfoI GCGC 1 cut(s) 490
Cfr10I RCCGGY 3 cut(s) 251, 471, 1030
Cfr13I GGNCC 3 cut(s) 257, 296, 474
ClaI ATCGAT 2 cut(s) 201, 732
Csp6I GTAC 2 cut(s) 544, 926
CviAII CATG 6 cut(s) 85, 370, 406, 478, 485, 607
CviQI GTAC 2 cut(s) 544, 926
DdeI CTNAG 3 cut(s) 153, 170, 956
DpnI GATC 5 cut(s) 149, 177, 204, 717, 774
DpnII GATC 5 cut(s) 147, 175, 202, 715, 772
Eam1104I CTCTTC 1 cut(s) 509
EarI CTCTTC 1 cut(s) 509
EciI GGCGGA 2 cut(s) 402, 818
Eco130I CCWWGG 2 cut(s) 369, 908
Eco147I AGGCCT 1 cut(s) 158
Eco24I GRGCYC 1 cut(s) 368
Eco47I GGWCC 1 cut(s) 296
Eco88I CYCGRG 1 cut(s) 361
Eco91I GGTNACC 1 cut(s) 950
EcoO65I GGTNACC 1 cut(s) 950
EcoRII CCWGG 2 cut(s) 259, 643
EcoT14I CCWWGG 2 cut(s) 369, 908
EcoT38I GRGCYC 1 cut(s) 368
ErhI CCWWGG 2 cut(s) 369, 908
FaeI CATG 6 cut(s) 88, 373, 409, 481, 488, 610
FalI AAGNNNNNCTT 1 cut(s) 1010
FaqI GGGAC 3 cut(s) 305, 565, 890
FatI CATG 6 cut(s) 84, 369, 405, 477, 484, 606
FauI CCCGC 1 cut(s) 590
Fnu4HI GCNGC 4 cut(s) 239, 242, 403, 521
FokI GGATG 3 cut(s) 260, 776, 848
FriOI GRGCYC 1 cut(s) 368
FseI GGCCGGCC 1 cut(s) 475
Fsp4HI GCNGC 4 cut(s) 239, 242, 403, 521
FspBI CTAG 3 cut(s) 800, 842, 909
GlaI GCGC 1 cut(s) 489
GluI GCNGC 4 cut(s) 239, 242, 403, 521
HaeIII GGCC 6 cut(s) 158, 231, 259, 471, 475, 1010
HapII CCGG 7 cut(s) 245, 252, 288, 472, 677, 1011, 1031
HhaI GCGC 1 cut(s) 490
Hin1II CATG 6 cut(s) 88, 373, 409, 481, 488, 610
Hin6I GCGC 1 cut(s) 488
HinP1I GCGC 1 cut(s) 488
HindIII AAGCTT 2 cut(s) 20, 66
HinfI GANTC 3 cut(s) 131, 312, 481
HpaII CCGG 7 cut(s) 245, 252, 288, 472, 677, 1011, 1031
HphI GGTGA 2 cut(s) 661, 850
Hpy166II GTNNAC 1 cut(s) 34
Hpy188I TCNGA 5 cut(s) 154, 171, 464, 959, 984
Hpy188III TCNNGA 1 cut(s) 361
Hpy8I GTNNAC 1 cut(s) 34
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 9 cut(s) 115, 212, 286, 411, 461, 682, 843, 940, 1000
HpyCH4III ACNGT 2 cut(s) 296, 826
HpyCH4IV ACGT 1 cut(s) 447
HpyCH4V TGCA 3 cut(s) 28, 593, 610
HpyF10VI GCNNNNNNNGC 2 cut(s) 393, 402
HpyF3I CTNAG 3 cut(s) 153, 170, 956
HpySE526I ACGT 1 cut(s) 447
Hsp92II CATG 6 cut(s) 88, 373, 409, 481, 488, 610
HspAI GCGC 1 cut(s) 488
KroI GCCGGC 2 cut(s) 471, 1030
KroNI GCCGGC 2 cut(s) 473, 1032
Kzo9I GATC 5 cut(s) 147, 175, 202, 715, 772
LmnI GCTCC 4 cut(s) 269, 505, 538, 852
Lsp1109I GCAGC 1 cut(s) 507
LweI GCATC 2 cut(s) 238, 580
MaeI CTAG 3 cut(s) 800, 842, 909
MaeII ACGT 1 cut(s) 447
MaeIII GTNAC 2 cut(s) 781, 950
MalI GATC 5 cut(s) 149, 177, 204, 717, 774
MboI GATC 5 cut(s) 147, 175, 202, 715, 772
MboII GAAGA 7 cut(s) 73, 227, 271, 526, 574, 580, 613
MflI RGATCY 2 cut(s) 147, 715
MhlI GDGCHC 1 cut(s) 368
MluCI AATT 4 cut(s) 194, 960, 965, 1014
MlyI GAGTC 2 cut(s) 140, 490
MmeI TCCRAC 1 cut(s) 1007
MroNI GCCGGC 2 cut(s) 471, 1030
MseI TTAA 2 cut(s) 963, 1017
MslI CAYNNNNRTG 1 cut(s) 611
MspI CCGG 7 cut(s) 245, 252, 288, 472, 677, 1011, 1031
MspR9I CCNGG 4 cut(s) 261, 289, 645, 677
Mva1269I GAATGC 1 cut(s) 924
MvaI CCWGG 2 cut(s) 261, 645
MwoI GCNNNNNNNGC 2 cut(s) 393, 402
NaeI GCCGGC 2 cut(s) 473, 1032
NciI CCSGG 2 cut(s) 289, 677
NcoI CCATGG 1 cut(s) 369
NdeII GATC 5 cut(s) 147, 175, 202, 715, 772
NgoMIV GCCGGC 2 cut(s) 471, 1030
NlaIII CATG 6 cut(s) 88, 373, 409, 481, 488, 610
NlaIV GGNNCC 3 cut(s) 95, 661, 854
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 1 cut(s) 781
PaeR7I CTCGAG 1 cut(s) 361
PaqCI CACCTGC 1 cut(s) 19
PceI AGGCCT 1 cut(s) 158
PctI GAATGC 1 cut(s) 924
PdiI GCCGGC 2 cut(s) 473, 1032
PfeI GAWTC 1 cut(s) 312
PflMI CCANNNNNTGG 1 cut(s) 90
PfoI TCCNGGA 1 cut(s) 675
PkrI GCNGC 4 cut(s) 240, 243, 404, 522
PleI GAGTC 2 cut(s) 139, 489
PpsI GAGTC 2 cut(s) 139, 489
Psp6I CCWGG 2 cut(s) 259, 643
PspEI GGTNACC 1 cut(s) 950
PspGI CCWGG 2 cut(s) 259, 643
PspN4I GGNNCC 3 cut(s) 95, 661, 854
PspPI GGNCC 3 cut(s) 257, 296, 474
PstI CTGCAG 1 cut(s) 30
PsuI RGATCY 2 cut(s) 147, 715
RigI GGCCGGCC 1 cut(s) 475
RsaI GTAC 2 cut(s) 545, 927
RsaNI GTAC 2 cut(s) 544, 926
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 2 cut(s) 963, 1017
SatI GCNGC 4 cut(s) 239, 242, 403, 521
Sau3AI GATC 5 cut(s) 147, 175, 202, 715, 772
Sau96I GGNCC 3 cut(s) 257, 296, 474
SchI GAGTC 2 cut(s) 140, 490
ScrFI CCNGG 4 cut(s) 261, 289, 645, 677
SduI GDGCHC 1 cut(s) 368
SfaNI GCATC 2 cut(s) 238, 580
SfcI CTRYAG 2 cut(s) 26, 507
Sfr274I CTCGAG 1 cut(s) 361
SinI GGWCC 1 cut(s) 296
SlaI CTCGAG 1 cut(s) 361
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 2 cut(s) 361, 533
SmoI CTYRAG 2 cut(s) 361, 533
Sse9I AATT 4 cut(s) 194, 960, 965, 1014
SseBI AGGCCT 1 cut(s) 158
SsiI CCGC 9 cut(s) 239, 242, 264, 387, 396, 402, 597, 713, 829
SspMI CTAG 3 cut(s) 800, 842, 909
StuI AGGCCT 1 cut(s) 158
StyD4I CCNGG 4 cut(s) 259, 287, 643, 675
StyI CCWWGG 2 cut(s) 369, 908
TaaI ACNGT 2 cut(s) 296, 826
TaiI ACGT 1 cut(s) 450
TaqI TCGA 5 cut(s) 178, 201, 362, 575, 732
TasI AATT 4 cut(s) 194, 960, 965, 1014
TatI WGTACW 1 cut(s) 543
TauI GCSGC 3 cut(s) 241, 244, 405
TfiI GAWTC 1 cut(s) 312
Tru1I TTAA 2 cut(s) 963, 1017
Tru9I TTAA 2 cut(s) 963, 1017
TscAI CASTG 1 cut(s) 829
TseFI GTSAC 1 cut(s) 781
TseI GCWGC 1 cut(s) 520
Tsp45I GTSAC 1 cut(s) 781
TspDTI ATGAA 4 cut(s) 101, 447, 581, 715
TspGWI ACGGA 1 cut(s) 225
TspRI CASTG 1 cut(s) 829
Van91I CCANNNNNTGG 1 cut(s) 90
VpaK11BI GGWCC 1 cut(s) 296
XapI RAATTY 1 cut(s) 965
XcmI CCANNNNNNNNNTGG 1 cut(s) 376
XhoI CTCGAG 1 cut(s) 361
XmaJI CCTAGG 1 cut(s) 908
XspI CTAG 3 cut(s) 800, 842, 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.