Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003201

Physical Location & Seq

Genomic Coordinates Reverse (-)

1534669 .. 1537367

Gene Structure 2699 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1012300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGATGAGATTAAACTTGCGCGTTTCAGGGATAATGACATACAATGGACTCGAAAATTGCATACTCAGCAGTCAATCTTTTGAAAATGAAAGCGGAACAAGTAGGGGAGATGGCTTTGTAACTGACTCACTGGACGATGATGCATCAACCTGTTCTTCAGGAAAGGATGCTTCTGGATCTTTCTCGTCAAAATGGATGACGGTGAACAAGGATGAACAAAGTCTTGATGAATGGGATCACTTGGACAGACCCCAGCATTTCTATGTTAACCAAAAACCTGATTATCCGCTTCAGAACTCAGATGTCGAGGCAATGAAAGAAAAATTTGCAAAGCTGTTATTGGGTGAAGATGTCACCGGAGGGAACAGGGGCCTCAGCACTGCACTTGCACTGTCAAATGCCATTACAAACCTGGCAGCAACGATTTTTGGAGAGCTGTGGAAACTCGAACCACTACCTGAAGATAGGAAAAGCAAATGGCGACGAGAAATGGACTGGTTTCTTACGCCTACGAACTATATGGTTGAGCTGGTTCCTGCCAAGCAAAATGGTGCAAATGGTAGAACACTAGAGATTATGACCCCAAAAGCCCGTGCAGACATACACATGAATCTTCCAGCACTTAAGAAGTTGGACTCCATGCTTATTGACACACTTGAGGCAATGGTCGATACTGAGTTTTGGTATGCAGAGGGAGGTAGCCGGGCAGAAGGGAGGAACAAAATGGCACGTCAGAGCAAGAGATGGTGGCTTCCAACACCCCAAGTACCAGCTACTGGGCTCTCTGATACAGCTAAAAGGAAATTGCTTAGTCATGGTAGGATAGTGCATCAAGTATTCAAGGCTGCCAGATCTATCAACGAAAGTGTGCTGCTTGAAATGCCTGTGCCAACCATTGTCAGGGATGCACTTCCGAAGTCTGGAAAAGCAAGCCTTAGCGAGGAACTGTACAAGGTCTTGACTGCTGAAACAAACTCAGCTGAGGAAATGCTCAATTCACTCAATCTAAAATCCGAGCACAATGCCCTTGAGGTCATTAACAGGCTGGAAGCTGCTGTTTTCTCTTGGAAAGAAAGAATTACAGAACAAGCGAGCAGTAAATCTCCTGCTCGAACATCTTGGTCCTTCATTAAGGACCCTTTATCTGAGATTGATAAGATGGAGTCACTATTGGATCAAGCCGAAGTACTTATACAGCAGCTGAAGACCAAATACCCCAACCTTCCCCAAACTTTTCTAGATGTTACAAAAATCCAATACGGCAAGGATATTGGTCATTCAATTCTGGAAGCATATTCACGAGTACTTGGAAACTTGGCATTCAGCATACTGTCCAGAGTAGGAGATGTTTTGCGAGAAGATGCTTTGCACAATCCCGACTCATGTACAGAATCATGTTACCTTCCGGGGACTAGTATCAGCTGTAACTCAAACAGTTACTCATTCATTGATGGCAACAGTGGGGTTCCCCGGCATTCTGATTCTACTTTGGGTAGCATCGTTTTAGAATTTTCATATAATGTAGCTAAAGATAGCCCTGTGACTGCAACACCAAGCCGATCACGTGTATGGTGCATTGGTAGAGAGGCTTGTGTAAGTGTTTCCCCTACAAACTCCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

541

Amino Acids

59.99

Weight (kDa)

5.58

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	100 - 457	8.2e-167	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31650 AT1G31650
fragaria_vesca	FvH4_5g24650 FvH4_5g24650 FvH4_5g24650
malus_domestica	MD06G1012300.v1.1
prunus_persica	Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1
pyrus_communis	pycom06g01030
rosa_chinensis	RchiOBHm_Chr1g0348481 RchiOBHm_Chr3g0483451 RchiOBHm_Chr5g0060521 RchiOBHm_Chr7g0215031
rosa_laevigata	RLG00000002698 RLG00000022617
rosa_multiflora	Rmu_ssc0000134.1_g000066
rosa_roxburghii	Rroxscaffold_3G00244650
rosa_rugosa	Rorug03G0254500 Rorug07G0149700 Rorug07G0149700
rosa_samantha	Rh1AG253100 Rh3AG184200 Rh3AG254500 Rh4AG241100 Rh4CG255300 Rh5AG463000 Rh5BG374200 Rh5CG248600 Rh7AG170100 Rh7AG286600 Rh7BG278100 Rh7CG306000 Rh7DG290100
rosa_wichuraiana	Rw6G016450 Rw7G024440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	776
AccII	CGCG	1 cut(s)	21
AciI	CCGC	2 cut(s)	93, 287
AclWI	GGATC	3 cut(s)	184, 243, 1182
AcsI	RAATTY	2 cut(s)	323, 1508
AcuI	CTGAAG	4 cut(s)	141, 275, 480, 1223
AcvI	CACGTG	1 cut(s)	1565
AfaI	GTAC	5 cut(s)	768, 950, 1188, 1305, 1387
AfiI	CCNNNNNNNGG	4 cut(s)	776, 900, 920, 940
AflII	CTTAAG	1 cut(s)	623
AflIII	ACRYGT	1 cut(s)	1564
AgsI	TTSAA	4 cut(s)	83, 841, 878, 1281
AhlI	ACTAGT	1 cut(s)	1412
AjiI	CACGTC	1 cut(s)	731
AjnI	CCWGG	1 cut(s)	411
Alw21I	GWGCWC	1 cut(s)	1020
AlwI	GGATC	3 cut(s)	184, 243, 1182
AlwNI	CAGNNNCTG	2 cut(s)	776, 1201
AoxI	GGCC	1 cut(s)	370
ApeKI	GCWGC	5 cut(s)	416, 845, 871, 1052, 1198
ApoI	RAATTY	2 cut(s)	323, 1508
AspLEI	GCGC	1 cut(s)	21
AspS9I	GGNCC	3 cut(s)	370, 1122, 1135
AsuC2I	CCSGG	3 cut(s)	704, 1407, 1471
AsuHPI	GGTGA	3 cut(s)	214, 346, 356
AvaII	GGWCC	2 cut(s)	1122, 1135
BanII	GRGCYC	1 cut(s)	783
BarI	GAAGNNNNNNTAC	4 cut(s)	1176, 1196, 1208, 1228
BauI	CACGAG	1 cut(s)	1299
BbrPI	CACGTG	1 cut(s)	1565
BbsI	GAAGAC	1 cut(s)	1211
Bbv12I	GWGCWC	1 cut(s)	1020
BbvCI	CCTCAGC	2 cut(s)	374, 981
BbvI	GCAGC	5 cut(s)	428, 832, 858, 1039, 1210
BccI	CCATC	4 cut(s)	104, 738, 1153, 1445
BceAI	ACGGC	1 cut(s)	1276
BcgI	CGANNNNNNTGC	2 cut(s)	1004, 1038
BciT130I	CCWGG	1 cut(s)	413
BcnI	CCSGG	3 cut(s)	704, 1407, 1471
BcuI	ACTAGT	1 cut(s)	1412
BfaI	CTAG	3 cut(s)	569, 1238, 1413
BfrI	CTTAAG	1 cut(s)	623
BglII	AGATCT	1 cut(s)	851
BisI	GCNGC	5 cut(s)	417, 846, 872, 1053, 1199
BlsI	GCNGC	5 cut(s)	418, 847, 873, 1054, 1200
BmcAI	AGTACT	2 cut(s)	1188, 1305
Bme1390I	CCNGG	4 cut(s)	413, 704, 1407, 1471
Bme18I	GGWCC	2 cut(s)	1122, 1135
BmgBI	CACGTC	1 cut(s)	731
BmgT120I	GGNCC	3 cut(s)	370, 1122, 1135
BmiI	GGNNCC	4 cut(s)	371, 534, 1137, 1467
BmrFI	CCNGG	4 cut(s)	413, 704, 1407, 1471
BmrI	ACTGGG	1 cut(s)	786
BmsI	GCATC	7 cut(s)	130, 152, 157, 838, 895, 1351, 1506
BmuI	ACTGGG	1 cut(s)	786
BpiI	GAAGAC	1 cut(s)	1211
Bpu10I	CCTNAGC	3 cut(s)	374, 935, 981
BpuEI	CTTGAG	2 cut(s)	677, 1049
BpuMI	CCSGG	3 cut(s)	704, 1407, 1471
BsaAI	YACGTR	1 cut(s)	1565
BsaJI	CCNNGG	2 cut(s)	1406, 1469
BsaWI	WCCGGW	1 cut(s)	356
Bsc4I	CCNNNNNNNGG	4 cut(s)	776, 900, 920, 940
Bse1I	ACTGG	3 cut(s)	135, 500, 781
Bse3DI	GCAATG	2 cut(s)	318, 669
BseBI	CCWGG	1 cut(s)	413
BseDI	CCNNGG	2 cut(s)	1406, 1469
BseGI	GGATG	4 cut(s)	172, 201, 217, 910
BseLI	CCNNNNNNNGG	4 cut(s)	776, 900, 920, 940
BseMI	GCAATG	2 cut(s)	318, 669
BseMII	CTCAG	7 cut(s)	79, 312, 388, 666, 972, 990, 1137
BseNI	ACTGG	3 cut(s)	135, 500, 781
BseXI	GCAGC	5 cut(s)	428, 832, 858, 1039, 1210
BseYI	CCCAGC	1 cut(s)	252
BsgI	GTGCAG	2 cut(s)	366, 615
Bsh1236I	CGCG	1 cut(s)	21
BshFI	GGCC	1 cut(s)	372
BsiHKAI	GWGCWC	1 cut(s)	1020
BsiSI	CCGG	4 cut(s)	357, 703, 1406, 1471
BslFI	GGGAC	1 cut(s)	1423
BslI	CCNNNNNNNGG	4 cut(s)	776, 900, 920, 940
BsmFI	GGGAC	1 cut(s)	1423
BsmI	GAATGC	2 cut(s)	1319, 1474
BsnI	GGCC	1 cut(s)	372
Bsp1286I	GDGCHC	2 cut(s)	783, 1020
Bsp1407I	TGTACA	2 cut(s)	948, 1385
Bsp143I	GATC	5 cut(s)	176, 235, 851, 1174, 1559
BspACI	CCGC	2 cut(s)	93, 287
BspANI	GGCC	1 cut(s)	372
BspCNI	CTCAG	7 cut(s)	78, 311, 387, 667, 973, 989, 1138
BspFNI	CGCG	1 cut(s)	21
BspLI	GGNNCC	4 cut(s)	371, 534, 1137, 1467
BspPI	GGATC	3 cut(s)	184, 243, 1182
BspTI	CTTAAG	1 cut(s)	623
BsrDI	GCAATG	2 cut(s)	318, 669
BsrGI	TGTACA	2 cut(s)	948, 1385
BsrI	ACTGG	3 cut(s)	135, 500, 781
BssECI	CCNNGG	2 cut(s)	1406, 1469
BssMI	GATC	5 cut(s)	176, 235, 851, 1174, 1559
BssSI	CACGAG	1 cut(s)	1299
Bst2BI	CACGAG	1 cut(s)	1299
Bst2UI	CCWGG	1 cut(s)	413
Bst4CI	ACNGT	6 cut(s)	202, 393, 948, 1332, 1436, 1460
BstAFI	CTTAAG	1 cut(s)	623
BstAUI	TGTACA	2 cut(s)	948, 1385
BstBAI	YACGTR	1 cut(s)	1565
BstC8I	GCNNGC	2 cut(s)	931, 1093
BstDEI	CTNAG	9 cut(s)	65, 298, 374, 675, 809, 935, 976, 981, 1146
BstENI	CCTNNNNNAGG	1 cut(s)	938
BstF5I	GGATG	4 cut(s)	172, 201, 217, 910
BstFNI	CGCG	1 cut(s)	21
BstHHI	GCGC	1 cut(s)	21
BstKTI	GATC	5 cut(s)	179, 238, 854, 1177, 1562
BstMBI	GATC	5 cut(s)	176, 235, 851, 1174, 1559
BstMWI	GCNNNNNNNGC	2 cut(s)	66, 880
BstNI	CCWGG	1 cut(s)	413
BstSCI	CCNGG	4 cut(s)	411, 702, 1405, 1469
BstUI	CGCG	1 cut(s)	21
BstV1I	GCAGC	5 cut(s)	428, 832, 858, 1039, 1210
BstV2I	GAAGAC	1 cut(s)	1211
BstX2I	RGATCY	2 cut(s)	176, 851
BstYI	RGATCY	2 cut(s)	176, 851
BsuRI	GGCC	1 cut(s)	372
BtrI	CACGTC	1 cut(s)	731
BtsCI	GGATG	4 cut(s)	172, 201, 217, 910
BtsI	GCAGTG	1 cut(s)	378
BtsIMutI	CAGTG	4 cut(s)	128, 378, 389, 1465
Cac8I	GCNNGC	2 cut(s)	931, 1093
CaiI	CAGNNNCTG	2 cut(s)	776, 1201
CfoI	GCGC	1 cut(s)	21
Cfr13I	GGNCC	3 cut(s)	370, 1122, 1135
Csp6I	GTAC	5 cut(s)	767, 949, 1187, 1304, 1386
CviAII	CATG	5 cut(s)	607, 640, 815, 1383, 1395
CviQI	GTAC	5 cut(s)	767, 949, 1187, 1304, 1386
DdeI	CTNAG	9 cut(s)	65, 298, 374, 675, 809, 935, 976, 981, 1146
DpnI	GATC	5 cut(s)	178, 237, 853, 1176, 1561
DpnII	GATC	5 cut(s)	176, 235, 851, 1174, 1559
Eco24I	GRGCYC	1 cut(s)	783
Eco47I	GGWCC	2 cut(s)	1122, 1135
Eco57I	CTGAAG	4 cut(s)	141, 275, 480, 1223
Eco72I	CACGTG	1 cut(s)	1565
EcoNI	CCTNNNNNAGG	1 cut(s)	938
EcoO109I	RGGNCCY	2 cut(s)	370, 1135
EcoRII	CCWGG	1 cut(s)	411
EcoT22I	ATGCAT	1 cut(s)	145
EcoT38I	GRGCYC	1 cut(s)	783
FaeI	CATG	5 cut(s)	610, 643, 818, 1386, 1398
FalI	AAGNNNNNCTT	2 cut(s)	918, 950
FaqI	GGGAC	1 cut(s)	1423
FatI	CATG	5 cut(s)	606, 639, 814, 1382, 1394
Fnu4HI	GCNGC	5 cut(s)	417, 846, 872, 1053, 1199
FokI	GGATG	4 cut(s)	179, 208, 224, 917
FriOI	GRGCYC	1 cut(s)	783
Fsp4HI	GCNGC	5 cut(s)	417, 846, 872, 1053, 1199
FspBI	CTAG	3 cut(s)	569, 1238, 1413
GlaI	GCGC	1 cut(s)	20
GluI	GCNGC	5 cut(s)	417, 846, 872, 1053, 1199
GsaI	CCCAGC	1 cut(s)	256
HaeIII	GGCC	1 cut(s)	372
HapII	CCGG	4 cut(s)	357, 703, 1406, 1471
HhaI	GCGC	1 cut(s)	21
Hin1II	CATG	5 cut(s)	610, 643, 818, 1386, 1398
Hin6I	GCGC	1 cut(s)	19
HinP1I	GCGC	1 cut(s)	19
HincII	GTYRAC	1 cut(s)	268
HindII	GTYRAC	1 cut(s)	268
HinfI	GANTC	8 cut(s)	48, 125, 610, 635, 1163, 1379, 1391, 1481
HpaI	GTTAAC	1 cut(s)	268
HpaII	CCGG	4 cut(s)	357, 703, 1406, 1471
HphI	GGTGA	3 cut(s)	214, 346, 356
Hpy166II	GTNNAC	2 cut(s)	205, 268
Hpy188I	TCNGA	8 cut(s)	294, 301, 735, 787, 915, 1015, 1147, 1480
Hpy8I	GTNNAC	2 cut(s)	205, 268
Hpy99I	CGWCG	1 cut(s)	486
HpyAV	CCTTC	4 cut(s)	704, 1135, 1232, 1412
HpyCH4III	ACNGT	6 cut(s)	202, 393, 948, 1332, 1436, 1460
HpyCH4IV	ACGT	2 cut(s)	730, 1564
HpyF10VI	GCNNNNNNNGC	2 cut(s)	66, 880
HpyF3I	CTNAG	9 cut(s)	65, 298, 374, 675, 809, 935, 976, 981, 1146
HpySE526I	ACGT	2 cut(s)	730, 1564
Hsp92II	CATG	5 cut(s)	610, 643, 818, 1386, 1398
HspAI	GCGC	1 cut(s)	19
KspAI	GTTAAC	1 cut(s)	268
Kzo9I	GATC	5 cut(s)	176, 235, 851, 1174, 1559
Lsp1109I	GCAGC	5 cut(s)	428, 832, 858, 1039, 1210
LweI	GCATC	7 cut(s)	130, 152, 157, 838, 895, 1351, 1506
MaeI	CTAG	3 cut(s)	569, 1238, 1413
MaeII	ACGT	2 cut(s)	730, 1564
MaeIII	GTNAC	8 cut(s)	118, 352, 1164, 1243, 1397, 1424, 1436, 1540
MalI	GATC	5 cut(s)	178, 237, 853, 1176, 1561
MboI	GATC	5 cut(s)	176, 235, 851, 1174, 1559
MboII	GAAGA	6 cut(s)	147, 359, 473, 605, 1216, 1370
MflI	RGATCY	2 cut(s)	176, 851
MhlI	GDGCHC	2 cut(s)	783, 1020
MluCI	AATT	7 cut(s)	55, 323, 803, 994, 1077, 1281, 1508
MlyI	GAGTC	5 cut(s)	42, 119, 629, 1172, 1373
MmeI	TCCRAC	2 cut(s)	612, 779
Mph1103I	ATGCAT	1 cut(s)	145
MseI	TTAA	5 cut(s)	11, 267, 624, 1038, 1131
MslI	CAYNNNNRTG	3 cut(s)	261, 605, 1567
MspA1I	CMGCKG	3 cut(s)	980, 1201, 1422
MspCI	CTTAAG	1 cut(s)	623
MspI	CCGG	4 cut(s)	357, 703, 1406, 1471
MspR9I	CCNGG	4 cut(s)	413, 704, 1407, 1471
Mva1269I	GAATGC	2 cut(s)	1319, 1474
MvaI	CCWGG	1 cut(s)	413
MvnI	CGCG	1 cut(s)	21
MwoI	GCNNNNNNNGC	2 cut(s)	66, 880
NciI	CCSGG	3 cut(s)	704, 1407, 1471
NdeII	GATC	5 cut(s)	176, 235, 851, 1174, 1559
NlaIII	CATG	5 cut(s)	610, 643, 818, 1386, 1398
NlaIV	GGNNCC	4 cut(s)	371, 534, 1137, 1467
NmuCI	GTSAC	3 cut(s)	352, 1164, 1540
NsiI	ATGCAT	1 cut(s)	145
PctI	GAATGC	2 cut(s)	1319, 1474
PfeI	GAWTC	3 cut(s)	610, 1391, 1481
PflMI	CCANNNNNTGG	1 cut(s)	776
PkrI	GCNGC	5 cut(s)	418, 847, 873, 1054, 1200
PleI	GAGTC	5 cut(s)	42, 119, 629, 1171, 1373
PmaCI	CACGTG	1 cut(s)	1565
PmlI	CACGTG	1 cut(s)	1565
PpsI	GAGTC	5 cut(s)	42, 119, 629, 1171, 1373
Ppu21I	YACGTR	1 cut(s)	1565
PpuMI	RGGWCCY	1 cut(s)	1135
Psp5II	RGGWCCY	1 cut(s)	1135
Psp6I	CCWGG	1 cut(s)	411
PspCI	CACGTG	1 cut(s)	1565
PspFI	CCCAGC	1 cut(s)	252
PspGI	CCWGG	1 cut(s)	411
PspN4I	GGNNCC	4 cut(s)	371, 534, 1137, 1467
PspPI	GGNCC	3 cut(s)	370, 1122, 1135
PspPPI	RGGWCCY	1 cut(s)	1135
PstNI	CAGNNNCTG	2 cut(s)	776, 1201
PsuI	RGATCY	2 cut(s)	176, 851
PvuII	CAGCTG	3 cut(s)	980, 1201, 1422
RsaI	GTAC	5 cut(s)	768, 950, 1188, 1305, 1387
RsaNI	GTAC	5 cut(s)	767, 949, 1187, 1304, 1386
RseI	CAYNNNNRTG	3 cut(s)	261, 605, 1567
SaqAI	TTAA	5 cut(s)	11, 267, 624, 1038, 1131
SatI	GCNGC	5 cut(s)	417, 846, 872, 1053, 1199
Sau3AI	GATC	5 cut(s)	176, 235, 851, 1174, 1559
Sau96I	GGNCC	3 cut(s)	370, 1122, 1135
ScaI	AGTACT	2 cut(s)	1188, 1305
SchI	GAGTC	5 cut(s)	42, 119, 629, 1172, 1373
ScrFI	CCNGG	4 cut(s)	413, 704, 1407, 1471
SduI	GDGCHC	2 cut(s)	783, 1020
SfaNI	GCATC	7 cut(s)	130, 152, 157, 838, 895, 1351, 1506
SinI	GGWCC	2 cut(s)	1122, 1135
SmiMI	CAYNNNNRTG	3 cut(s)	261, 605, 1567
SmlI	CTYRAG	3 cut(s)	623, 656, 1028
SmoI	CTYRAG	3 cut(s)	623, 656, 1028
SpeI	ACTAGT	1 cut(s)	1412
Sse9I	AATT	7 cut(s)	55, 323, 803, 994, 1077, 1281, 1508
SsiI	CCGC	2 cut(s)	93, 287
SspMI	CTAG	3 cut(s)	569, 1238, 1413
StyD4I	CCNGG	4 cut(s)	411, 702, 1405, 1469
TaaI	ACNGT	6 cut(s)	202, 393, 948, 1332, 1436, 1460
TaiI	ACGT	2 cut(s)	733, 1567
TaqI	TCGA	5 cut(s)	51, 306, 447, 669, 1111
TasI	AATT	7 cut(s)	55, 323, 803, 994, 1077, 1281, 1508
TatI	WGTACW	4 cut(s)	948, 1186, 1303, 1385
TfiI	GAWTC	3 cut(s)	610, 1391, 1481
Tru1I	TTAA	5 cut(s)	11, 267, 624, 1038, 1131
Tru9I	TTAA	5 cut(s)	11, 267, 624, 1038, 1131
TscAI	CASTG	4 cut(s)	135, 385, 396, 1465
TseFI	GTSAC	3 cut(s)	352, 1164, 1540
TseI	GCWGC	5 cut(s)	416, 845, 871, 1052, 1198
Tsp45I	GTSAC	3 cut(s)	352, 1164, 1540
TspDTI	ATGAA	8 cut(s)	102, 228, 243, 329, 623, 1117, 1435, 1503
TspRI	CASTG	4 cut(s)	135, 385, 396, 1465
Van91I	CCANNNNNTGG	1 cut(s)	776
Vha464I	CTTAAG	1 cut(s)	623
VpaK11BI	GGWCC	2 cut(s)	1122, 1135
XagI	CCTNNNNNAGG	1 cut(s)	938
XapI	RAATTY	2 cut(s)	323, 1508
XbaI	TCTAGA	1 cut(s)	1237
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XspI	CTAG	3 cut(s)	569, 1238, 1413
ZrmI	AGTACT	2 cut(s)	1188, 1305
Zsp2I	ATGCAT	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.