Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003201

Physical Location & Seq

Genomic Coordinates Forward (+)

25852195 .. 25857187

Gene Structure 4993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG278100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGAAGAGAGGACTTGCTTGTTGCAGCCGGGACAGGGAGATTAGCATCGACTTTGATGAGCAAGAGAGAATAATGACATACAATGGCCTTGAAAATTGCATTCTGAATGTACAATCTTTTGAGAATGAGAGCGGAACAAGTAGAGGAGATGGGTTTGCAACTGACTCATTGGATGATGATGCTTCCACCTGTTCTTCTGGCAAAGATGCTTTTGGCTCATTCTCTTCAAAATGGTTGACAGTGAACAAAGATGACCATGGTCTGGATGAATGGGAGCACTTAGACAGTCCCAAGAATTTCTATGTCAAAGAAAAACCTGCTTATGCACTCCAGTATACAGATGTGGAGGCAATGAAAGAAAAGTTTGCAAAGCTGCTATTGGGTGAAGATATTACAGGAGGGTACAATGGCCTCAGCACTGCTTTAGCATTGTCAAATGCCATCACAAATCTAGCAGCAACGGTTTTTGGAGAGCTGTGGAAACTGGAACCACTATCTGAAGAGAGGAAAACAAAATGGCAAAGAGAAATGGACTGGTTGCTCTCCCCTACTAACTATATGGTTGAGCTGGTTCCTTCCAGGCAAAATGGTGCTAATGGCCGGACATTAGAGATTATGACTCCGAAAGCTCGTGCAGACATACATCTCAATCTTCCAGCACTTAAGAAGTTGGACTCGATGCTTATTGAAACACTTGATTCAATGGTGGATACTGAGTTTGGGTATGTAGAAGGTGGTAGCAGGGCAGAAGGACGAAACAGAACTCCAGGTCAGAGCAAGAGATGGTGGCTCCCATCACCCCAGGTACCAGCTACTGGACTCTCTGATACAGCAAAGAATAAGTTACTTAAACAGGGTAAGGTGGTACATCAAGTATTCAAGGCTGCCAGAACCATCAACGAAAGTGTTCTTCTTGAAATGCCTGTGCCAACCATTATCAGGGATGCACTTCCCAAGTCAGGAAAAGCAAGCCTGGGTGAGGAACTGTACAAGGTCTTAACTGCAGAATCAAGCTCAGCTGAGGAAATGCTTAATTCTCTCAATCTAAAATCCGAACATAATGCCCTCGAGGTCATCAACAGGCTGGAAGCTGCTGTATTTTCGTGGAAAGAAAGAATTACAGAACAAGAAAGTGGTAGATCCCCTGTTCGAACATCATGGTCCTTCATTAAGGACCCAATGTCTGAGATTGATAAGATGGAGTCCCTATTGGATCGAGCAGAAAGACTTGTACAGCGGCTCAAGAACAGATACCACAACCTTCCCCAAACTTTTCTTGACGTCACAAAAATCCAATACGGCAAGGATGTTGGGCATTCAATCTTGGAAGCATATTCTCGAGTCCTTGGAAATTTGGCTTTCAGCATACTGTCTAGAATAGGTGATGTACTGCAAGAAGATGCTCTGAACACTCCCAGTTCATTTACAGCATCATCTTACTTCCCAGGGATTAATTTTACTAATAAATTAGAAACTTCAGTGCTTGGCCAAAACATAAGATACTCATTCCTTGATCGAAGCAGTGGGGATCACCGTAATTCTGACTCTACTTCATCTAATATTGATTTAGAGTTTTCGTACAGTGTGACTAAAGGAAGTCCTGTAACAGCAACACCAAGTCGGGCTAGGGTTTGGTGCATTGGTAGAGAGGCTTGTATCAGTGTTTCCCCTACAAATTCCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

561

Amino Acids

62.55

Weight (kDa)

5.48

Isoelectric Point (pI)

46.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	114 - 469	4.1e-168	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31650 AT1G31650
fragaria_vesca	FvH4_5g24650 FvH4_5g24650 FvH4_5g24650
malus_domestica	MD06G1012300.v1.1
prunus_persica	Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1
pyrus_communis	pycom06g01030
rosa_chinensis	RchiOBHm_Chr1g0348481 RchiOBHm_Chr3g0483451 RchiOBHm_Chr5g0060521 RchiOBHm_Chr7g0215031
rosa_laevigata	RLG00000002698 RLG00000022617
rosa_multiflora	Rmu_ssc0000134.1_g000066
rosa_roxburghii	Rroxscaffold_3G00244650
rosa_rugosa	Rorug03G0254500 Rorug07G0149700 Rorug07G0149700
rosa_samantha	Rh1AG253100 Rh3AG184200 Rh3AG254500 Rh4AG241100 Rh4CG255300 Rh5AG463000 Rh5BG374200 Rh5CG248600 Rh7AG170100 Rh7AG286600 Rh7BG278100 Rh7CG306000 Rh7DG290100
rosa_wichuraiana	Rw6G016450 Rw7G024440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1284
AbsI	CCTCGAGG	1 cut(s)	1067
Acc36I	ACCTGC	1 cut(s)	325
Acc65I	GGTACC	1 cut(s)	805
AccB1I	GGYRCC	1 cut(s)	805
AccB7I	CCANNNNNTGG	2 cut(s)	262, 815
AccBSI	CCGCTC	1 cut(s)	132
AccI	GTMKAC	1 cut(s)	335
AciI	CCGC	2 cut(s)	132, 1237
AclWI	GGATC	3 cut(s)	1134, 1221, 1536
AcoI	YGGCCR	2 cut(s)	598, 1486
AcsI	RAATTY	3 cut(s)	295, 1351, 1675
AcuI	CTGAAG	2 cut(s)	519, 1461
AcyI	GRCGYC	1 cut(s)	1281
AfaI	GTAC	8 cut(s)	111, 404, 807, 867, 989, 1233, 1389, 1580
AfiI	CCNNNNNNNGG	6 cut(s)	34, 262, 815, 939, 959, 979
AflII	CTTAAG	1 cut(s)	662
AgsI	TTSAA	7 cut(s)	92, 228, 689, 702, 880, 917, 1320
AhdI	GACNNNNNGTC	1 cut(s)	1180
AjnI	CCWGG	5 cut(s)	578, 766, 801, 972, 1444
AluBI	AGCT	8 cut(s)	373, 475, 568, 629, 812, 1014, 1019, 1091
AluI	AGCT	8 cut(s)	373, 475, 568, 629, 812, 1014, 1019, 1091
Alw21I	GWGCWC	1 cut(s)	279
AlwI	GGATC	3 cut(s)	1134, 1221, 1536
AlwNI	CAGNNNCTG	1 cut(s)	815
Ama87I	CYCGRG	2 cut(s)	1067, 1338
AoxI	GGCC	4 cut(s)	85, 409, 598, 1486
ApeKI	GCWGC	5 cut(s)	24, 373, 455, 884, 1091
ApoI	RAATTY	3 cut(s)	295, 1351, 1675
AseI	ATTAAT	1 cut(s)	1452
Asp700I	GAANNNNTTC	1 cut(s)	906
Asp718I	GGTACC	1 cut(s)	805
AspS9I	GGNCC	2 cut(s)	1161, 1174
AsuC2I	CCSGG	1 cut(s)	29
AsuHPI	GGTGA	5 cut(s)	395, 789, 989, 1394, 1523
AsuII	TTCGAA	1 cut(s)	1150
AvaI	CYCGRG	2 cut(s)	1067, 1338
AvaII	GGWCC	2 cut(s)	1161, 1174
BalI	TGGCCA	1 cut(s)	1488
BanI	GGYRCC	1 cut(s)	805
BauI	CACGAG	1 cut(s)	630
Bbv12I	GWGCWC	1 cut(s)	279
BbvCI	CCTCAGC	2 cut(s)	413, 1020
BbvI	GCAGC	5 cut(s)	36, 360, 467, 871, 1078
BccI	CCATC	6 cut(s)	143, 449, 777, 802, 902, 1192
BceAI	ACGGC	1 cut(s)	1315
BcgI	CGANNNNNNTGC	2 cut(s)	1043, 1077
BciT130I	CCWGG	5 cut(s)	580, 768, 803, 974, 1446
BciVI	GTATCC	1 cut(s)	703
BcnI	CCSGG	1 cut(s)	29
BfaI	CTAG	3 cut(s)	452, 1374, 1626
BfmI	CTRYAG	1 cut(s)	1002
BfrI	CTTAAG	1 cut(s)	662
BfuAI	ACCTGC	1 cut(s)	325
BfuI	GTATCC	1 cut(s)	703
BisI	GCNGC	6 cut(s)	25, 374, 456, 885, 1092, 1238
BlpI	GCTNAGC	1 cut(s)	1015
BlsI	GCNGC	6 cut(s)	26, 375, 457, 886, 1093, 1239
Bme1390I	CCNGG	6 cut(s)	29, 580, 768, 803, 974, 1446
Bme18I	GGWCC	2 cut(s)	1161, 1174
BmeRI	GACNNNNNGTC	1 cut(s)	1180
BmeT110I	CYCGRG	2 cut(s)	1067, 1338
BmgT120I	GGNCC	2 cut(s)	1161, 1174
BmiI	GGNNCC	5 cut(s)	489, 573, 791, 807, 1176
BmrFI	CCNGG	6 cut(s)	29, 580, 768, 803, 974, 1446
BmrI	ACTGGG	1 cut(s)	1410
BmsI	GCATC	7 cut(s)	54, 169, 196, 669, 934, 1390, 1439
BmuI	ACTGGG	1 cut(s)	1410
BoxI	GACNNNNGTC	1 cut(s)	258
BpmI	CTGGAG	2 cut(s)	314, 750
Bpu10I	CCTNAGC	2 cut(s)	413, 1020
Bpu1102I	GCTNAGC	1 cut(s)	1015
Bpu14I	TTCGAA	1 cut(s)	1150
BpuEI	CTTGAG	1 cut(s)	1226
BpuMI	CCSGG	1 cut(s)	29
BsaBI	GATNNNNATC	1 cut(s)	44
BsaHI	GRCGYC	1 cut(s)	1281
BsaJI	CCNNGG	6 cut(s)	256, 801, 973, 1345, 1444, 1445
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 262, 815, 939, 959, 979
Bse1I	ACTGG	5 cut(s)	331, 489, 539, 820, 1416
Bse3DI	GCAATG	1 cut(s)	357
Bse8I	GATNNNNATC	1 cut(s)	44
BseBI	CCWGG	5 cut(s)	580, 768, 803, 974, 1446
BseDI	CCNNGG	6 cut(s)	256, 801, 973, 1345, 1444, 1445
BseGI	GGATG	4 cut(s)	178, 271, 949, 1312
BseJI	GATNNNNATC	1 cut(s)	44
BseLI	CCNNNNNNNGG	6 cut(s)	34, 262, 815, 939, 959, 979
BseMI	GCAATG	1 cut(s)	357
BseMII	CTCAG	5 cut(s)	427, 705, 1011, 1029, 1176
BseNI	ACTGG	5 cut(s)	331, 489, 539, 820, 1416
BseRI	GAGGAG	1 cut(s)	159
BseXI	GCAGC	5 cut(s)	36, 360, 467, 871, 1078
BsgI	GTGCAG	1 cut(s)	654
BshFI	GGCC	4 cut(s)	87, 411, 600, 1488
BshNI	GGYRCC	1 cut(s)	805
BsiHKAI	GWGCWC	1 cut(s)	279
BsiHKCI	CYCGRG	2 cut(s)	1067, 1338
BsiSI	CCGG	2 cut(s)	28, 601
BslFI	GGGAC	3 cut(s)	44, 273, 1189
BslI	CCNNNNNNNGG	6 cut(s)	34, 262, 815, 939, 959, 979
BsmFI	GGGAC	3 cut(s)	44, 273, 1189
BsmI	GAATGC	2 cut(s)	99, 1315
BsnI	GGCC	4 cut(s)	87, 411, 600, 1488
BsoBI	CYCGRG	2 cut(s)	1067, 1338
Bsp119I	TTCGAA	1 cut(s)	1150
Bsp1286I	GDGCHC	1 cut(s)	279
Bsp1407I	TGTACA	3 cut(s)	109, 987, 1231
Bsp143I	GATC	4 cut(s)	1139, 1213, 1513, 1528
Bsp1720I	GCTNAGC	1 cut(s)	1015
Bsp19I	CCATGG	1 cut(s)	256
BspACI	CCGC	2 cut(s)	132, 1237
BspANI	GGCC	4 cut(s)	87, 411, 600, 1488
BspCNI	CTCAG	5 cut(s)	426, 706, 1012, 1028, 1177
BspLI	GGNNCC	5 cut(s)	489, 573, 791, 807, 1176
BspMAI	CTGCAG	1 cut(s)	1006
BspMI	ACCTGC	1 cut(s)	325
BspPI	GGATC	3 cut(s)	1134, 1221, 1536
BspT104I	TTCGAA	1 cut(s)	1150
BspT107I	GGYRCC	1 cut(s)	805
BspTI	CTTAAG	1 cut(s)	662
BsrBI	CCGCTC	1 cut(s)	132
BsrDI	GCAATG	1 cut(s)	357
BsrGI	TGTACA	3 cut(s)	109, 987, 1231
BsrI	ACTGG	5 cut(s)	331, 489, 539, 820, 1416
BssECI	CCNNGG	6 cut(s)	256, 801, 973, 1345, 1444, 1445
BssMI	GATC	4 cut(s)	1139, 1213, 1513, 1528
BssNAI	GTATAC	1 cut(s)	336
BssNI	GRCGYC	1 cut(s)	1281
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	2 cut(s)	256, 1345
Bst1107I	GTATAC	1 cut(s)	336
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	5 cut(s)	580, 768, 803, 974, 1446
Bst4CI	ACNGT	7 cut(s)	241, 287, 463, 987, 1371, 1535, 1583
Bst6I	CTCTTC	2 cut(s)	229, 495
BstACI	GRCGYC	1 cut(s)	1281
BstAFI	CTTAAG	1 cut(s)	662
BstAUI	TGTACA	3 cut(s)	109, 987, 1231
BstBI	TTCGAA	1 cut(s)	1150
BstC8I	GCNNGC	1 cut(s)	970
BstDEI	CTNAG	6 cut(s)	280, 413, 714, 1015, 1020, 1185
BstDSI	CCRYGG	1 cut(s)	256
BstENI	CCTNNNNNAGG	1 cut(s)	977
BstF5I	GGATG	4 cut(s)	178, 271, 949, 1312
BstKTI	GATC	4 cut(s)	1142, 1216, 1516, 1531
BstMBI	GATC	4 cut(s)	1139, 1213, 1513, 1528
BstNI	CCWGG	5 cut(s)	580, 768, 803, 974, 1446
BstPAI	GACNNNNGTC	1 cut(s)	258
BstSCI	CCNGG	6 cut(s)	27, 578, 766, 801, 972, 1444
BstSFI	CTRYAG	1 cut(s)	1002
BstV1I	GCAGC	5 cut(s)	36, 360, 467, 871, 1078
BstX2I	RGATCY	1 cut(s)	1139
BstYI	RGATCY	1 cut(s)	1139
BstZ17I	GTATAC	1 cut(s)	336
BsuI	GTATCC	1 cut(s)	703
BsuRI	GGCC	4 cut(s)	87, 411, 600, 1488
BtgI	CCRYGG	1 cut(s)	256
BtsCI	GGATG	4 cut(s)	178, 271, 949, 1312
BtsI	GCAGTG	2 cut(s)	417, 1528
BtsIMutI	CAGTG	6 cut(s)	246, 417, 1485, 1528, 1588, 1666
BveI	ACCTGC	1 cut(s)	325
Cac8I	GCNNGC	1 cut(s)	970
CaiI	CAGNNNCTG	1 cut(s)	815
Cfr13I	GGNCC	2 cut(s)	1161, 1174
Csp6I	GTAC	8 cut(s)	110, 403, 806, 866, 988, 1232, 1388, 1579
CviAII	CATG	2 cut(s)	257, 1158
CviQI	GTAC	8 cut(s)	110, 403, 806, 866, 988, 1232, 1388, 1579
DdeI	CTNAG	6 cut(s)	280, 413, 714, 1015, 1020, 1185
DpnI	GATC	4 cut(s)	1141, 1215, 1515, 1530
DpnII	GATC	4 cut(s)	1139, 1213, 1513, 1528
DriI	GACNNNNNGTC	1 cut(s)	1180
EaeI	YGGCCR	2 cut(s)	598, 1486
Eam1104I	CTCTTC	2 cut(s)	229, 495
Eam1105I	GACNNNNNGTC	1 cut(s)	1180
EarI	CTCTTC	2 cut(s)	229, 495
Eco130I	CCWWGG	2 cut(s)	256, 1345
Eco47I	GGWCC	2 cut(s)	1161, 1174
Eco57I	CTGAAG	2 cut(s)	519, 1461
Eco88I	CYCGRG	2 cut(s)	1067, 1338
EcoNI	CCTNNNNNAGG	1 cut(s)	977
EcoO109I	RGGNCCY	1 cut(s)	1174
EcoRII	CCWGG	5 cut(s)	578, 766, 801, 972, 1444
EcoT14I	CCWWGG	2 cut(s)	256, 1345
ErhI	CCWWGG	2 cut(s)	256, 1345
FaeI	CATG	2 cut(s)	260, 1161
FaqI	GGGAC	3 cut(s)	44, 273, 1189
FatI	CATG	2 cut(s)	256, 1157
FblI	GTMKAC	1 cut(s)	335
Fnu4HI	GCNGC	6 cut(s)	25, 374, 456, 885, 1092, 1238
FokI	GGATG	4 cut(s)	185, 278, 956, 1319
Fsp4HI	GCNGC	6 cut(s)	25, 374, 456, 885, 1092, 1238
FspBI	CTAG	3 cut(s)	452, 1374, 1626
GluI	GCNGC	6 cut(s)	25, 374, 456, 885, 1092, 1238
GsuI	CTGGAG	2 cut(s)	314, 750
HaeIII	GGCC	4 cut(s)	87, 411, 600, 1488
HapII	CCGG	2 cut(s)	28, 601
Hin1I	GRCGYC	1 cut(s)	1281
Hin1II	CATG	2 cut(s)	260, 1161
HincII	GTYRAC	1 cut(s)	237
HindII	GTYRAC	1 cut(s)	237
HinfI	GANTC	9 cut(s)	164, 619, 674, 698, 819, 1007, 1202, 1341, 1544
HpaII	CCGG	2 cut(s)	28, 601
HphI	GGTGA	5 cut(s)	395, 789, 989, 1394, 1523
Hpy166II	GTNNAC	3 cut(s)	237, 244, 336
Hpy188I	TCNGA	9 cut(s)	105, 499, 624, 774, 826, 1054, 1186, 1407, 1543
Hpy188III	TCNNGA	7 cut(s)	263, 914, 960, 1243, 1277, 1338, 1374
Hpy8I	GTNNAC	3 cut(s)	237, 244, 336
HpyAV	CCTTC	5 cut(s)	585, 725, 743, 1174, 1271
HpyCH4III	ACNGT	7 cut(s)	241, 287, 463, 987, 1371, 1535, 1583
HpyCH4IV	ACGT	1 cut(s)	1281
HpyF3I	CTNAG	6 cut(s)	280, 413, 714, 1015, 1020, 1185
HpySE526I	ACGT	1 cut(s)	1281
Hsp92I	GRCGYC	1 cut(s)	1281
Hsp92II	CATG	2 cut(s)	260, 1161
KpnI	GGTACC	1 cut(s)	809
Kzo9I	GATC	4 cut(s)	1139, 1213, 1513, 1528
LmnI	GCTCC	2 cut(s)	274, 795
Lsp1109I	GCAGC	5 cut(s)	36, 360, 467, 871, 1078
LweI	GCATC	7 cut(s)	54, 169, 196, 669, 934, 1390, 1439
MaeI	CTAG	3 cut(s)	452, 1374, 1626
MaeII	ACGT	1 cut(s)	1281
MaeIII	GTNAC	4 cut(s)	843, 1282, 1585, 1603
MalI	GATC	4 cut(s)	1141, 1215, 1515, 1530
MbiI	CCGCTC	1 cut(s)	132
MboI	GATC	4 cut(s)	1139, 1213, 1513, 1528
MboII	GAAGA	8 cut(s)	16, 186, 216, 398, 512, 644, 902, 1409
MflI	RGATCY	1 cut(s)	1139
MhlI	GDGCHC	1 cut(s)	279
MlsI	TGGCCA	1 cut(s)	1488
MluCI	AATT	9 cut(s)	94, 295, 1033, 1116, 1351, 1453, 1466, 1537, 1675
MluNI	TGGCCA	1 cut(s)	1488
MlyI	GAGTC	7 cut(s)	158, 613, 668, 813, 1211, 1350, 1538
MmeI	TCCRAC	1 cut(s)	651
Mox20I	TGGCCA	1 cut(s)	1488
MroXI	GAANNNNTTC	1 cut(s)	906
MscI	TGGCCA	1 cut(s)	1488
MseI	TTAA	6 cut(s)	663, 849, 998, 1032, 1170, 1452
Msp20I	TGGCCA	1 cut(s)	1488
MspA1I	CMGCKG	2 cut(s)	1019, 1237
MspCI	CTTAAG	1 cut(s)	662
MspI	CCGG	2 cut(s)	28, 601
MspR9I	CCNGG	6 cut(s)	29, 580, 768, 803, 974, 1446
Mva1269I	GAATGC	2 cut(s)	99, 1315
MvaI	CCWGG	5 cut(s)	580, 768, 803, 974, 1446
NciI	CCSGG	1 cut(s)	29
NcoI	CCATGG	1 cut(s)	256
NdeII	GATC	4 cut(s)	1139, 1213, 1513, 1528
NlaIII	CATG	2 cut(s)	260, 1161
NlaIV	GGNNCC	5 cut(s)	489, 573, 791, 807, 1176
NmuCI	GTSAC	2 cut(s)	1282, 1585
NspV	TTCGAA	1 cut(s)	1150
PaeR7I	CTCGAG	2 cut(s)	1067, 1338
PasI	CCCWGGG	1 cut(s)	1445
PctI	GAATGC	2 cut(s)	99, 1315
PdmI	GAANNNNTTC	1 cut(s)	906
PfeI	GAWTC	2 cut(s)	698, 1007
PflMI	CCANNNNNTGG	2 cut(s)	262, 815
PkrI	GCNGC	6 cut(s)	26, 375, 457, 886, 1093, 1239
PleI	GAGTC	7 cut(s)	158, 613, 668, 813, 1210, 1349, 1538
PpsI	GAGTC	7 cut(s)	158, 613, 668, 813, 1210, 1349, 1538
PpuMI	RGGWCCY	1 cut(s)	1174
PshAI	GACNNNNGTC	1 cut(s)	258
PshBI	ATTAAT	1 cut(s)	1452
Psp5II	RGGWCCY	1 cut(s)	1174
Psp6I	CCWGG	5 cut(s)	578, 766, 801, 972, 1444
PspGI	CCWGG	5 cut(s)	578, 766, 801, 972, 1444
PspN4I	GGNNCC	5 cut(s)	489, 573, 791, 807, 1176
PspPI	GGNCC	2 cut(s)	1161, 1174
PspPPI	RGGWCCY	1 cut(s)	1174
PspXI	VCTCGAGB	1 cut(s)	1067
PstI	CTGCAG	1 cut(s)	1006
PstNI	CAGNNNCTG	1 cut(s)	815
PsuI	RGATCY	1 cut(s)	1139
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	8 cut(s)	111, 404, 807, 867, 989, 1233, 1389, 1580
RsaNI	GTAC	8 cut(s)	110, 403, 806, 866, 988, 1232, 1388, 1579
SaqAI	TTAA	6 cut(s)	663, 849, 998, 1032, 1170, 1452
SatI	GCNGC	6 cut(s)	25, 374, 456, 885, 1092, 1238
Sau3AI	GATC	4 cut(s)	1139, 1213, 1513, 1528
Sau96I	GGNCC	2 cut(s)	1161, 1174
SchI	GAGTC	7 cut(s)	158, 613, 668, 813, 1211, 1350, 1538
ScrFI	CCNGG	6 cut(s)	29, 580, 768, 803, 974, 1446
SduI	GDGCHC	1 cut(s)	279
SfaNI	GCATC	7 cut(s)	54, 169, 196, 669, 934, 1390, 1439
SfcI	CTRYAG	1 cut(s)	1002
Sfr274I	CTCGAG	2 cut(s)	1067, 1338
SfuI	TTCGAA	1 cut(s)	1150
SinI	GGWCC	2 cut(s)	1161, 1174
SlaI	CTCGAG	2 cut(s)	1067, 1338
SmlI	CTYRAG	4 cut(s)	662, 1067, 1241, 1338
SmoI	CTYRAG	4 cut(s)	662, 1067, 1241, 1338
Sse9I	AATT	9 cut(s)	94, 295, 1033, 1116, 1351, 1453, 1466, 1537, 1675
SsiI	CCGC	2 cut(s)	132, 1237
SspI	AATATT	1 cut(s)	1561
SspMI	CTAG	3 cut(s)	452, 1374, 1626
StyD4I	CCNGG	6 cut(s)	27, 578, 766, 801, 972, 1444
StyI	CCWWGG	2 cut(s)	256, 1345
TaaI	ACNGT	7 cut(s)	241, 287, 463, 987, 1371, 1535, 1583
TaiI	ACGT	1 cut(s)	1284
TaqI	TCGA	7 cut(s)	48, 677, 1068, 1150, 1216, 1339, 1516
TasI	AATT	9 cut(s)	94, 295, 1033, 1116, 1351, 1453, 1466, 1537, 1675
TatI	WGTACW	4 cut(s)	109, 987, 1231, 1387
TauI	GCSGC	1 cut(s)	1240
TfiI	GAWTC	2 cut(s)	698, 1007
Tru1I	TTAA	6 cut(s)	663, 849, 998, 1032, 1170, 1452
Tru9I	TTAA	6 cut(s)	663, 849, 998, 1032, 1170, 1452
TscAI	CASTG	6 cut(s)	246, 424, 1485, 1528, 1588, 1666
TseFI	GTSAC	2 cut(s)	1282, 1585
TseI	GCWGC	5 cut(s)	24, 373, 455, 884, 1091
Tsp45I	GTSAC	2 cut(s)	1282, 1585
TspDTI	ATGAA	6 cut(s)	17, 282, 368, 1156, 1410, 1542
TspRI	CASTG	6 cut(s)	246, 424, 1485, 1528, 1588, 1666
Van91I	CCANNNNNTGG	2 cut(s)	262, 815
Vha464I	CTTAAG	1 cut(s)	662
VpaK11BI	GGWCC	2 cut(s)	1161, 1174
VspI	ATTAAT	1 cut(s)	1452
XagI	CCTNNNNNAGG	1 cut(s)	977
XapI	RAATTY	3 cut(s)	295, 1351, 1675
XbaI	TCTAGA	1 cut(s)	1373
XhoI	CTCGAG	2 cut(s)	1067, 1338
XmiI	GTMKAC	1 cut(s)	335
XmnI	GAANNNNTTC	1 cut(s)	906
XspI	CTAG	3 cut(s)	452, 1374, 1626
ZraI	GACGTC	1 cut(s)	1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.