Rop guanine nucleotide exchange factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31650 AT1G31650 |
| fragaria_vesca | FvH4_5g24650 FvH4_5g24650 FvH4_5g24650 |
| malus_domestica | MD06G1012300.v1.1 |
| prunus_persica | Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 Prupe.5G015000_v2.0.a1 |
| pyrus_communis | pycom06g01030 |
| rosa_chinensis | RchiOBHm_Chr1g0348481 RchiOBHm_Chr3g0483451 RchiOBHm_Chr5g0060521 RchiOBHm_Chr7g0215031 |
| rosa_laevigata | RLG00000002698 RLG00000022617 |
| rosa_multiflora | Rmu_ssc0000134.1_g000066 |
| rosa_roxburghii | Rroxscaffold_3G00244650 |
| rosa_rugosa | Rorug03G0254500 Rorug07G0149700 Rorug07G0149700 |
| rosa_samantha | Rh1AG253100 Rh3AG184200 Rh3AG254500 Rh4AG241100 Rh4CG255300 Rh5AG463000 Rh5BG374200 Rh5CG248600 Rh7AG170100 Rh7AG286600 Rh7BG278100 Rh7CG306000 Rh7DG290100 |
| rosa_wichuraiana | Rw6G016450 Rw7G024440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 697 |
| AciI | CCGC | 1 cut(s) | 1134 |
| AclWI | GGATC | 3 cut(s) | 223, 885, 1530 |
| AcoI | YGGCCR | 2 cut(s) | 109, 1480 |
| AcsI | RAATTY | 3 cut(s) | 334, 362, 1565 |
| AcuI | CTGAAG | 4 cut(s) | 180, 314, 519, 647 |
| AcvI | CACGTG | 1 cut(s) | 1622 |
| AfaI | GTAC | 3 cut(s) | 807, 1227, 1344 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 959, 979, 1600 |
| AflIII | ACRYGT | 1 cut(s) | 1621 |
| AgsI | TTSAA | 9 cut(s) | 92, 186, 228, 369, 880, 917, 1320, 1408, 1473 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1180 |
| AjiI | CACGTC | 2 cut(s) | 343, 770 |
| AluBI | AGCT | 8 cut(s) | 373, 475, 568, 659, 812, 1019, 1091, 1240 |
| AluI | AGCT | 8 cut(s) | 373, 475, 568, 659, 812, 1019, 1091, 1240 |
| Alw21I | GWGCWC | 1 cut(s) | 1621 |
| Alw26I | GTCTC | 2 cut(s) | 630, 683 |
| AlwI | GGATC | 3 cut(s) | 223, 885, 1530 |
| Ama87I | CYCGRG | 2 cut(s) | 27, 1338 |
| AoxI | GGCC | 3 cut(s) | 109, 409, 1480 |
| ApeKI | GCWGC | 3 cut(s) | 455, 884, 1091 |
| ApoI | RAATTY | 3 cut(s) | 334, 362, 1565 |
| AseI | ATTAAT | 1 cut(s) | 1452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 906 |
| AspS9I | GGNCC | 4 cut(s) | 409, 1161, 1174, 1213 |
| AsuC2I | CCSGG | 3 cut(s) | 28, 29, 743 |
| AsuHPI | GGTGA | 2 cut(s) | 395, 989 |
| AsuII | TTCGAA | 1 cut(s) | 1150 |
| AvaI | CYCGRG | 2 cut(s) | 27, 1338 |
| AvaII | GGWCC | 3 cut(s) | 1161, 1174, 1213 |
| BalI | TGGCCA | 1 cut(s) | 1482 |
| BanII | GRGCYC | 1 cut(s) | 279 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1215, 1247 |
| BbrPI | CACGTG | 1 cut(s) | 1622 |
| Bbv12I | GWGCWC | 1 cut(s) | 1621 |
| BbvCI | CCTCAGC | 2 cut(s) | 413, 1020 |
| BbvI | GCAGC | 3 cut(s) | 467, 871, 1078 |
| BccI | CCATC | 6 cut(s) | 143, 325, 449, 777, 902, 1502 |
| BceAI | ACGGC | 2 cut(s) | 124, 1617 |
| BciVI | GTATCC | 1 cut(s) | 395 |
| BcnI | CCSGG | 3 cut(s) | 28, 29, 743 |
| BcoDI | GTCTC | 2 cut(s) | 630, 683 |
| BfaI | CTAG | 2 cut(s) | 452, 1374 |
| BfmI | CTRYAG | 1 cut(s) | 1002 |
| BfuI | GTATCC | 1 cut(s) | 395 |
| BisI | GCNGC | 3 cut(s) | 456, 885, 1092 |
| BlpI | GCTNAGC | 1 cut(s) | 579 |
| BlsI | GCNGC | 3 cut(s) | 457, 886, 1093 |
| BmcAI | AGTACT | 2 cut(s) | 1227, 1344 |
| Bme1390I | CCNGG | 3 cut(s) | 28, 29, 743 |
| Bme18I | GGWCC | 3 cut(s) | 1161, 1174, 1213 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1180 |
| BmeT110I | CYCGRG | 2 cut(s) | 27, 1338 |
| BmgBI | CACGTC | 2 cut(s) | 343, 770 |
| BmgT120I | GGNCC | 4 cut(s) | 409, 1161, 1174, 1213 |
| BmiI | GGNNCC | 4 cut(s) | 276, 489, 573, 1176 |
| BmrFI | CCNGG | 3 cut(s) | 28, 29, 743 |
| BmrI | ACTGGG | 1 cut(s) | 825 |
| BmsI | GCATC | 6 cut(s) | 54, 169, 196, 934, 1390, 1439 |
| BmuI | ACTGGG | 1 cut(s) | 825 |
| Bpu10I | CCTNAGC | 2 cut(s) | 413, 1020 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 579 |
| Bpu14I | TTCGAA | 1 cut(s) | 1150 |
| BpuEI | CTTGAG | 2 cut(s) | 716, 1088 |
| BpuMI | CCSGG | 3 cut(s) | 28, 29, 743 |
| BsaAI | YACGTR | 1 cut(s) | 1622 |
| BsaBI | GATNNNNATC | 2 cut(s) | 44, 1454 |
| BsaJI | CCNNGG | 4 cut(s) | 27, 631, 973, 1445 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 959, 979, 1600 |
| Bse1I | ACTGG | 5 cut(s) | 174, 267, 489, 539, 820 |
| Bse8I | GATNNNNATC | 2 cut(s) | 44, 1454 |
| BseDI | CCNNGG | 4 cut(s) | 27, 631, 973, 1445 |
| BseGI | GGATG | 5 cut(s) | 178, 271, 609, 949, 1312 |
| BseJI | GATNNNNATC | 2 cut(s) | 44, 1454 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 959, 979, 1600 |
| BseMII | CTCAG | 4 cut(s) | 427, 705, 1011, 1029 |
| BseNI | ACTGG | 5 cut(s) | 174, 267, 489, 539, 820 |
| BseRI | GAGGAG | 2 cut(s) | 19, 159 |
| BseXI | GCAGC | 3 cut(s) | 467, 871, 1078 |
| BshFI | GGCC | 3 cut(s) | 111, 411, 1482 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1621 |
| BsiHKCI | CYCGRG | 2 cut(s) | 27, 1338 |
| BsiSI | CCGG | 2 cut(s) | 28, 742 |
| BslFI | GGGAC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 959, 979, 1600 |
| BsmAI | GTCTC | 2 cut(s) | 630, 683 |
| BsmFI | GGGAC | 1 cut(s) | 44 |
| BsmI | GAATGC | 2 cut(s) | 99, 1315 |
| BsnI | GGCC | 3 cut(s) | 111, 411, 1482 |
| BsoBI | CYCGRG | 2 cut(s) | 27, 1338 |
| Bsp119I | TTCGAA | 1 cut(s) | 1150 |
| Bsp1286I | GDGCHC | 2 cut(s) | 279, 1621 |
| Bsp143I | GATC | 3 cut(s) | 215, 890, 1522 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 579 |
| Bsp19I | CCATGG | 1 cut(s) | 1445 |
| BspACI | CCGC | 1 cut(s) | 1134 |
| BspANI | GGCC | 3 cut(s) | 111, 411, 1482 |
| BspCNI | CTCAG | 4 cut(s) | 426, 706, 1012, 1028 |
| BspLI | GGNNCC | 4 cut(s) | 276, 489, 573, 1176 |
| BspMAI | CTGCAG | 1 cut(s) | 1006 |
| BspPI | GGATC | 3 cut(s) | 223, 885, 1530 |
| BspQI | GCTCTTC | 1 cut(s) | 666 |
| BspT104I | TTCGAA | 1 cut(s) | 1150 |
| BsrI | ACTGG | 5 cut(s) | 174, 267, 489, 539, 820 |
| BssECI | CCNNGG | 4 cut(s) | 27, 631, 973, 1445 |
| BssMI | GATC | 3 cut(s) | 215, 890, 1522 |
| BssT1I | CCWWGG | 2 cut(s) | 973, 1445 |
| Bst4CI | ACNGT | 6 cut(s) | 241, 432, 463, 934, 1371, 1577 |
| Bst6I | CTCTTC | 5 cut(s) | 229, 495, 517, 666, 1474 |
| BstBAI | YACGTR | 1 cut(s) | 1622 |
| BstBI | TTCGAA | 1 cut(s) | 1150 |
| BstC8I | GCNNGC | 3 cut(s) | 15, 970, 1480 |
| BstDEI | CTNAG | 7 cut(s) | 280, 413, 579, 714, 1015, 1020, 1561 |
| BstDSI | CCRYGG | 2 cut(s) | 631, 1445 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 977 |
| BstF5I | GGATG | 5 cut(s) | 178, 271, 609, 949, 1312 |
| BstKTI | GATC | 3 cut(s) | 218, 893, 1525 |
| BstMAI | GTCTC | 2 cut(s) | 630, 683 |
| BstMBI | GATC | 3 cut(s) | 215, 890, 1522 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 138, 919 |
| BstSCI | CCNGG | 3 cut(s) | 26, 27, 741 |
| BstSFI | CTRYAG | 1 cut(s) | 1002 |
| BstV1I | GCAGC | 3 cut(s) | 467, 871, 1078 |
| BstX2I | RGATCY | 1 cut(s) | 890 |
| BstYI | RGATCY | 1 cut(s) | 890 |
| BsuI | GTATCC | 1 cut(s) | 395 |
| BsuRI | GGCC | 3 cut(s) | 111, 411, 1482 |
| BtgI | CCRYGG | 2 cut(s) | 631, 1445 |
| BtrI | CACGTC | 2 cut(s) | 343, 770 |
| BtsCI | GGATG | 5 cut(s) | 178, 271, 609, 949, 1312 |
| BtsIMutI | CAGTG | 4 cut(s) | 167, 246, 428, 1582 |
| Cac8I | GCNNGC | 3 cut(s) | 15, 970, 1480 |
| Cfr13I | GGNCC | 4 cut(s) | 409, 1161, 1174, 1213 |
| Cfr9I | CCCGGG | 1 cut(s) | 27 |
| Csp6I | GTAC | 3 cut(s) | 806, 1226, 1343 |
| CviAII | CATG | 3 cut(s) | 646, 679, 1446 |
| CviQI | GTAC | 3 cut(s) | 806, 1226, 1343 |
| DdeI | CTNAG | 7 cut(s) | 280, 413, 579, 714, 1015, 1020, 1561 |
| DpnI | GATC | 3 cut(s) | 217, 892, 1524 |
| DpnII | GATC | 3 cut(s) | 215, 890, 1522 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 697 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1180 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 697 |
| EaeI | YGGCCR | 2 cut(s) | 109, 1480 |
| Eam1104I | CTCTTC | 5 cut(s) | 229, 495, 517, 666, 1474 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1180 |
| EarI | CTCTTC | 5 cut(s) | 229, 495, 517, 666, 1474 |
| Eco130I | CCWWGG | 2 cut(s) | 973, 1445 |
| Eco24I | GRGCYC | 1 cut(s) | 279 |
| Eco32I | GATATC | 1 cut(s) | 1253 |
| Eco47I | GGWCC | 3 cut(s) | 1161, 1174, 1213 |
| Eco57I | CTGAAG | 4 cut(s) | 180, 314, 519, 647 |
| Eco72I | CACGTG | 1 cut(s) | 1622 |
| Eco88I | CYCGRG | 2 cut(s) | 27, 1338 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 977 |
| EcoO109I | RGGNCCY | 2 cut(s) | 409, 1174 |
| EcoRI | GAATTC | 1 cut(s) | 334 |
| EcoRV | GATATC | 1 cut(s) | 1253 |
| EcoT14I | CCWWGG | 2 cut(s) | 973, 1445 |
| EcoT38I | GRGCYC | 1 cut(s) | 279 |
| ErhI | CCWWGG | 2 cut(s) | 973, 1445 |
| FaeI | CATG | 3 cut(s) | 649, 682, 1449 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 957, 989 |
| FaqI | GGGAC | 1 cut(s) | 44 |
| FatI | CATG | 3 cut(s) | 645, 678, 1445 |
| Fnu4HI | GCNGC | 3 cut(s) | 456, 885, 1092 |
| FokI | GGATG | 5 cut(s) | 185, 278, 616, 956, 1319 |
| FriOI | GRGCYC | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 3 cut(s) | 456, 885, 1092 |
| FspBI | CTAG | 2 cut(s) | 452, 1374 |
| GluI | GCNGC | 3 cut(s) | 456, 885, 1092 |
| HaeIII | GGCC | 3 cut(s) | 111, 411, 1482 |
| HapII | CCGG | 2 cut(s) | 28, 742 |
| Hin1II | CATG | 3 cut(s) | 649, 682, 1449 |
| HincII | GTYRAC | 1 cut(s) | 237 |
| HindII | GTYRAC | 1 cut(s) | 237 |
| HinfI | GANTC | 6 cut(s) | 164, 649, 674, 698, 1202, 1538 |
| HpaII | CCGG | 2 cut(s) | 28, 742 |
| HphI | GGTGA | 2 cut(s) | 395, 989 |
| Hpy166II | GTNNAC | 2 cut(s) | 237, 244 |
| Hpy188III | TCNNGA | 5 cut(s) | 119, 960, 1277, 1338, 1374 |
| Hpy8I | GTNNAC | 2 cut(s) | 237, 244 |
| HpyAV | CCTTC | 5 cut(s) | 725, 743, 747, 1174, 1271 |
| HpyCH4III | ACNGT | 6 cut(s) | 241, 432, 463, 934, 1371, 1577 |
| HpyCH4IV | ACGT | 4 cut(s) | 324, 342, 769, 1621 |
| HpyCH4V | TGCA | 9 cut(s) | 24, 99, 158, 593, 728, 947, 1004, 1393, 1632 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 138, 919 |
| HpyF3I | CTNAG | 7 cut(s) | 280, 413, 579, 714, 1015, 1020, 1561 |
| HpySE526I | ACGT | 4 cut(s) | 324, 342, 769, 1621 |
| Hsp92II | CATG | 3 cut(s) | 649, 682, 1449 |
| Kzo9I | GATC | 3 cut(s) | 215, 890, 1522 |
| LguI | GCTCTTC | 1 cut(s) | 666 |
| LmnI | GCTCC | 1 cut(s) | 274 |
| Lsp1109I | GCAGC | 3 cut(s) | 467, 871, 1078 |
| LweI | GCATC | 6 cut(s) | 54, 169, 196, 934, 1390, 1439 |
| MaeI | CTAG | 2 cut(s) | 452, 1374 |
| MaeII | ACGT | 4 cut(s) | 324, 342, 769, 1621 |
| MaeIII | GTNAC | 5 cut(s) | 391, 1203, 1282, 1436, 1597 |
| MalI | GATC | 3 cut(s) | 217, 892, 1524 |
| MboI | GATC | 3 cut(s) | 215, 890, 1522 |
| MflI | RGATCY | 1 cut(s) | 890 |
| MhlI | GDGCHC | 2 cut(s) | 279, 1621 |
| MlsI | TGGCCA | 1 cut(s) | 1482 |
| MluCI | AATT | 9 cut(s) | 94, 334, 362, 842, 1033, 1116, 1320, 1417, 1565 |
| MluNI | TGGCCA | 1 cut(s) | 1482 |
| MlyI | GAGTC | 4 cut(s) | 158, 668, 707, 1211 |
| MmeI | TCCRAC | 2 cut(s) | 581, 651 |
| MnlI | CCTC | 9 cut(s) | 60, 137, 340, 392, 422, 973, 1015, 1063, 1636 |
| Mox20I | TGGCCA | 1 cut(s) | 1482 |
| MroXI | GAANNNNTTC | 1 cut(s) | 906 |
| MscI | TGGCCA | 1 cut(s) | 1482 |
| MseI | TTAA | 5 cut(s) | 998, 1041, 1077, 1170, 1452 |
| MslI | CAYNNNNRTG | 3 cut(s) | 300, 644, 1624 |
| Msp20I | TGGCCA | 1 cut(s) | 1482 |
| MspA1I | CMGCKG | 2 cut(s) | 1019, 1240 |
| MspI | CCGG | 2 cut(s) | 28, 742 |
| MspR9I | CCNGG | 3 cut(s) | 28, 29, 743 |
| Mva1269I | GAATGC | 2 cut(s) | 99, 1315 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 138, 919 |
| NciI | CCSGG | 3 cut(s) | 28, 29, 743 |
| NcoI | CCATGG | 1 cut(s) | 1445 |
| NdeII | GATC | 3 cut(s) | 215, 890, 1522 |
| NlaIII | CATG | 3 cut(s) | 649, 682, 1449 |
| NlaIV | GGNNCC | 4 cut(s) | 276, 489, 573, 1176 |
| NmuCI | GTSAC | 3 cut(s) | 391, 1203, 1597 |
| NspV | TTCGAA | 1 cut(s) | 1150 |
| PaeR7I | CTCGAG | 1 cut(s) | 1338 |
| PciSI | GCTCTTC | 1 cut(s) | 666 |
| PctI | GAATGC | 2 cut(s) | 99, 1315 |
| PdmI | GAANNNNTTC | 1 cut(s) | 906 |
| PfeI | GAWTC | 2 cut(s) | 649, 1538 |
| PkrI | GCNGC | 3 cut(s) | 457, 886, 1093 |
| PleI | GAGTC | 4 cut(s) | 158, 668, 706, 1210 |
| PmaCI | CACGTG | 1 cut(s) | 1622 |
| PmlI | CACGTG | 1 cut(s) | 1622 |
| PpsI | GAGTC | 4 cut(s) | 158, 668, 706, 1210 |
| Ppu21I | YACGTR | 1 cut(s) | 1622 |
| PpuMI | RGGWCCY | 1 cut(s) | 1174 |
| PshBI | ATTAAT | 1 cut(s) | 1452 |
| Psp5II | RGGWCCY | 1 cut(s) | 1174 |
| PspCI | CACGTG | 1 cut(s) | 1622 |
| PspN4I | GGNNCC | 4 cut(s) | 276, 489, 573, 1176 |
| PspPI | GGNCC | 4 cut(s) | 409, 1161, 1174, 1213 |
| PspPPI | RGGWCCY | 1 cut(s) | 1174 |
| PstI | CTGCAG | 1 cut(s) | 1006 |
| PsuI | RGATCY | 1 cut(s) | 890 |
| PvuII | CAGCTG | 2 cut(s) | 1019, 1240 |
| RsaI | GTAC | 3 cut(s) | 807, 1227, 1344 |
| RsaNI | GTAC | 3 cut(s) | 806, 1226, 1343 |
| RseI | CAYNNNNRTG | 3 cut(s) | 300, 644, 1624 |
| SapI | GCTCTTC | 1 cut(s) | 666 |
| SaqAI | TTAA | 5 cut(s) | 998, 1041, 1077, 1170, 1452 |
| SatI | GCNGC | 3 cut(s) | 456, 885, 1092 |
| Sau3AI | GATC | 3 cut(s) | 215, 890, 1522 |
| Sau96I | GGNCC | 4 cut(s) | 409, 1161, 1174, 1213 |
| ScaI | AGTACT | 2 cut(s) | 1227, 1344 |
| SchI | GAGTC | 4 cut(s) | 158, 668, 707, 1211 |
| ScrFI | CCNGG | 3 cut(s) | 28, 29, 743 |
| SduI | GDGCHC | 2 cut(s) | 279, 1621 |
| SfaNI | GCATC | 6 cut(s) | 54, 169, 196, 934, 1390, 1439 |
| SfcI | CTRYAG | 1 cut(s) | 1002 |
| Sfr274I | CTCGAG | 1 cut(s) | 1338 |
| SfuI | TTCGAA | 1 cut(s) | 1150 |
| SinI | GGWCC | 3 cut(s) | 1161, 1174, 1213 |
| SlaI | CTCGAG | 1 cut(s) | 1338 |
| SmaI | CCCGGG | 1 cut(s) | 29 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 300, 644, 1624 |
| SmlI | CTYRAG | 3 cut(s) | 695, 1067, 1338 |
| SmoI | CTYRAG | 3 cut(s) | 695, 1067, 1338 |
| Sse9I | AATT | 9 cut(s) | 94, 334, 362, 842, 1033, 1116, 1320, 1417, 1565 |
| SsiI | CCGC | 1 cut(s) | 1134 |
| SspMI | CTAG | 2 cut(s) | 452, 1374 |
| StyD4I | CCNGG | 3 cut(s) | 26, 27, 741 |
| StyI | CCWWGG | 2 cut(s) | 973, 1445 |
| TaaI | ACNGT | 6 cut(s) | 241, 432, 463, 934, 1371, 1577 |
| TaiI | ACGT | 4 cut(s) | 327, 345, 772, 1624 |
| TaqI | TCGA | 7 cut(s) | 48, 120, 1150, 1339, 1541, 1557, 1615 |
| TaqII | GACCGA | 1 cut(s) | 1230 |
| TasI | AATT | 9 cut(s) | 94, 334, 362, 842, 1033, 1116, 1320, 1417, 1565 |
| TatI | WGTACW | 3 cut(s) | 805, 1225, 1342 |
| TfiI | GAWTC | 2 cut(s) | 649, 1538 |
| Tru1I | TTAA | 5 cut(s) | 998, 1041, 1077, 1170, 1452 |
| Tru9I | TTAA | 5 cut(s) | 998, 1041, 1077, 1170, 1452 |
| TscAI | CASTG | 4 cut(s) | 174, 246, 435, 1582 |
| TseFI | GTSAC | 3 cut(s) | 391, 1203, 1597 |
| TseI | GCWGC | 3 cut(s) | 455, 884, 1091 |
| Tsp45I | GTSAC | 3 cut(s) | 391, 1203, 1597 |
| TspMI | CCCGGG | 1 cut(s) | 27 |
| TspRI | CASTG | 4 cut(s) | 174, 246, 435, 1582 |
| VpaK11BI | GGWCC | 3 cut(s) | 1161, 1174, 1213 |
| VspI | ATTAAT | 1 cut(s) | 1452 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 977 |
| XapI | RAATTY | 3 cut(s) | 334, 362, 1565 |
| XbaI | TCTAGA | 1 cut(s) | 1373 |
| XhoI | CTCGAG | 1 cut(s) | 1338 |
| XmaI | CCCGGG | 1 cut(s) | 27 |
| XmnI | GAANNNNTTC | 1 cut(s) | 906 |
| XspI | CTAG | 2 cut(s) | 452, 1374 |
| ZrmI | AGTACT | 2 cut(s) | 1227, 1344 |