MD07G1095100.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
10236817 .. 10240372
3556 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1095100.v1.1.491

Sequence Viewer

Length: 1587 bp
ATGGCAGCAGCAAAGATAATGCTATCTATGTTGTTGGGTGGATTTGTGATATTGCTTTTGTATCTCTACGAGTCTTTGGTTTTAAAGCAAAGGAGGCAGAGATCAAAGCTTGAAAAGCAAGGAATCAGAGGACCTCCCTCTTCATCAATTATCTTTGGAAATATCCCGGACATGAAAAGGTTCAAGCTCGAGGTGACGAAGAAGTCAACAGCTGCAGCACCCAGCAGGAGTCCGATCTCGAAAGACCATCGTGTTTCCATTAATCATGATTGGCCTTCAACCCTTTTCCCTCATCTGGTGCAATGGCGAAACGAATATGGGCCAATCTTCATGTATTCAACTGGAATCATTCAGCATGTAAGTGTTTCAGATGTAGAGATGGTGAAGGAACTTAGCCTGGCATCTTTGAACTTAGGGCAGCCTGCTTACAAATTGTCTAAGGATCGCAAGCCTCTGTTAGGCCAAGGCATTCTATCTTCAAACGGCCCGATTTGGTCACACCAAAGAAAGATTATTGCTCCTGAGTTCTACTCCGACAAGGTTAAGGGTATGGTGGATTTGATGGTGGACTCGACAACAATGATGGTAAGAAACTGGGAGCATAAAATCGAAAGTGAGGGAGGAAGTTCAGTCTTTAGAGTGGATGATGATTTGAGAAGCTTGTCAGCAGATATCATATCTAGAGCATCCTTTGGAAGTAATTATTTACAAGGGAAAGAAATTTTTTTAAAGCTCAGAACTCTTCAGAAAATCATGTCGAATGGAAACATTGGGGTTCCCGGTGCAAGATACCTGCCAACGCAAAACAACAGACAGATAGGGAGATTAGAGAAAGAGATCCACTCAATGATCTTAAAGGCTGCGAAGCAACGCAGTACTGAAGCTACTCATGAGAAGGACCTTATGCAAATGATACTAGAGGGGGCAAAAAATTATGATGATGCTGATAACCTATTTTCAGGTTACTCCCGTGATAGTTTCATAGTGGATAATTGCAAAAGTATTTACTTTGCTGGCCATGAAACCATCGCCATCACAGCAACATGGAGCTTGATGTTGTTAGCTACACATCCAGAGTGGCAAGCTCATGTCCGTGCTGAGGTGCTTGAAATTTTCAGGGATGGTATTCCAGATGCTGATATGTTTCGAAGCATGAAAACATTGAATATGGTGATTCAAGAAACCTTACGGTTGTACCCACCAGCTGTGTTTGTTGTAAGACAAGCCCTCAAAGATATCGAGTTCAACAAAATCGTAGTTCCCAAGGGAACAAACATTCAGATTCCAGTTCCAATATTGCAGCAACTGCCTGATGTCTGGGGCCCTGACGCCCTTCAATTCAATCCAAAAAGATTTAGGCATGGAATTGTTGCTGCCTGCAAGTCTCCTGAGGCTTATATGCCATTTGGATTTGGTCCTCGGATTTGTGTTGGCAAAAACTTAGCAATGACAGAATTGAAGGTGATTCTATCTCTTATTCTTTCCAAGTTTTGCTTCTCACTCTCCCCGGCATACCAGCACTCGCCAGCTTGTAGGTTGGTCATTGAACCTGAGCATGGAGTAATTCTCCATCTGAAGAGAGTGTGA

Protein Analysis

529

Amino Acids

59.55

Weight (kDa)

9.46

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 98 - 506 4.2e-80 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 801
AclWI GGATC 2 cut(s) 450, 832
AcoI YGGCCR 1 cut(s) 1015
AcsI RAATTY 2 cut(s) 720, 1110
AcuI CTGAAG 2 cut(s) 728, 900
AcyI GRCGYC 1 cut(s) 1329
AfaI GTAC 2 cut(s) 877, 1196
AfiI CCNNNNNNNGG 4 cut(s) 295, 458, 1099, 1556
AjnI CCWGG 1 cut(s) 396
AjuI GAANNNNNNNTTGG 2 cut(s) 1478, 1510
Alw26I GTCTC 1 cut(s) 1389
AlwI GGATC 2 cut(s) 450, 832
AlwNI CAGNNNCTG 2 cut(s) 1136, 1306
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 6 cut(s) 272, 320, 460, 484, 1015, 1321
ApaI GGGCCC 1 cut(s) 1325
ApeKI GCWGC 8 cut(s) 5, 8, 212, 215, 418, 860, 1300, 1373
ApoI RAATTY 2 cut(s) 720, 1110
AseI ATTAAT 1 cut(s) 261
Asp700I GAANNNNTTC 1 cut(s) 179
AspS9I GGNCC 7 cut(s) 131, 320, 485, 898, 1321, 1322, 1415
AsuC2I CCSGG 3 cut(s) 167, 780, 1508
AsuHPI GGTGA 4 cut(s) 205, 394, 1183, 1474
AsuII TTCGAA 1 cut(s) 1147
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 3 cut(s) 131, 898, 1415
AxyI CCTNAGG 1 cut(s) 1389
BaeGI GKGCMC 1 cut(s) 1325
BaeI ACNNNNGTAYC 2 cut(s) 1178, 1211
BalI TGGCCA 1 cut(s) 1017
BanII GRGCYC 1 cut(s) 1325
BbvCI CCTCAGC 1 cut(s) 1098
BbvI GCAGC 8 cut(s) 17, 20, 199, 227, 430, 847, 1312, 1360
BccI CCATC 8 cut(s) 255, 373, 556, 577, 1034, 1040, 1115, 1578
BceAI ACGGC 1 cut(s) 499
BciT130I CCWGG 1 cut(s) 398
BcnI CCSGG 3 cut(s) 167, 780, 1508
BcoDI GTCTC 1 cut(s) 1389
BfaI CTAG 2 cut(s) 681, 917
BfmI CTRYAG 1 cut(s) 213
BfuAI ACCTGC 1 cut(s) 801
BisI GCNGC 8 cut(s) 6, 9, 213, 216, 419, 861, 1301, 1374
BlsI GCNGC 8 cut(s) 7, 10, 214, 217, 420, 862, 1302, 1375
BmcAI AGTACT 1 cut(s) 877
Bme1390I CCNGG 4 cut(s) 167, 398, 780, 1508
Bme18I GGWCC 3 cut(s) 131, 898, 1415
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 7 cut(s) 131, 320, 485, 898, 1321, 1322, 1415
BmiI GGNNCC 3 cut(s) 777, 1322, 1323
BmrFI CCNGG 4 cut(s) 167, 398, 780, 1508
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 4 cut(s) 410, 695, 931, 1123
BmuI ACTGGG 1 cut(s) 604
BplI GAGNNNNNCTC 6 cut(s) 515, 547, 827, 859, 1551, 1583
Bpu10I CCTNAGC 2 cut(s) 1098, 1551
Bpu14I TTCGAA 1 cut(s) 1147
BpuMI CCSGG 3 cut(s) 167, 780, 1508
BsaHI GRCGYC 1 cut(s) 1329
BsaJI CCNNGG 4 cut(s) 463, 1263, 1418, 1506
Bsc4I CCNNNNNNNGG 4 cut(s) 295, 458, 1099, 1556
Bse1I ACTGG 3 cut(s) 346, 599, 1286
Bse21I CCTNAGG 1 cut(s) 1389
Bse3DI GCAATG 2 cut(s) 308, 1452
BseBI CCWGG 1 cut(s) 398
BseDI CCNNGG 4 cut(s) 463, 1263, 1418, 1506
BseGI GGATG 4 cut(s) 649, 686, 1069, 1126
BseLI CCNNNNNNNGG 4 cut(s) 295, 458, 1099, 1556
BseMI GCAATG 2 cut(s) 308, 1452
BseMII CTCAG 5 cut(s) 513, 748, 1089, 1380, 1542
BseNI ACTGG 3 cut(s) 346, 599, 1286
BseSI GKGCMC 1 cut(s) 1325
BseXI GCAGC 8 cut(s) 17, 20, 199, 227, 430, 847, 1312, 1360
BseYI CCCAGC 1 cut(s) 221
BshFI GGCC 6 cut(s) 274, 322, 462, 486, 1017, 1323
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 3 cut(s) 167, 780, 1508
BslI CCNNNNNNNGG 4 cut(s) 295, 458, 1099, 1556
BsmAI GTCTC 1 cut(s) 1389
BsmI GAATGC 1 cut(s) 468
BsnI GGCC 6 cut(s) 274, 322, 462, 486, 1017, 1323
BsoBI CYCGRG 1 cut(s) 188
Bsp119I TTCGAA 1 cut(s) 1147
Bsp120I GGGCCC 1 cut(s) 1321
Bsp1286I GDGCHC 1 cut(s) 1325
Bsp143I GATC 5 cut(s) 101, 234, 442, 837, 849
BspANI GGCC 6 cut(s) 274, 322, 462, 486, 1017, 1323
BspCNI CTCAG 5 cut(s) 514, 747, 1090, 1381, 1543
BspHI TCATGA 2 cut(s) 265, 889
BspLI GGNNCC 3 cut(s) 777, 1322, 1323
BspMAI CTGCAG 1 cut(s) 217
BspMI ACCTGC 1 cut(s) 801
BspPI GGATC 2 cut(s) 450, 832
BspT104I TTCGAA 1 cut(s) 1147
BsrDI GCAATG 2 cut(s) 308, 1452
BsrI ACTGG 3 cut(s) 346, 599, 1286
BssECI CCNNGG 4 cut(s) 463, 1263, 1418, 1506
BssMI GATC 5 cut(s) 101, 234, 442, 837, 849
BssNI GRCGYC 1 cut(s) 1329
BssT1I CCWWGG 2 cut(s) 463, 1263
Bst2UI CCWGG 1 cut(s) 398
Bst4CI ACNGT 1 cut(s) 1191
Bst6I CTCTTC 3 cut(s) 145, 747, 1571
BstACI GRCGYC 1 cut(s) 1329
BstAPI GCANNNNNTGC 1 cut(s) 1306
BstBI TTCGAA 1 cut(s) 1147
BstC8I GCNNGC 6 cut(s) 423, 449, 1015, 1083, 1378, 1527
BstDEI CTNAG 9 cut(s) 392, 412, 438, 522, 734, 1098, 1389, 1441, 1551
BstENI CCTNNNNNAGG 1 cut(s) 456
BstF5I GGATG 4 cut(s) 649, 686, 1069, 1126
BstKTI GATC 5 cut(s) 104, 237, 445, 840, 852
BstMAI GTCTC 1 cut(s) 1389
BstMBI GATC 5 cut(s) 101, 234, 442, 837, 849
BstMWI GCNNNNNNNGC 4 cut(s) 94, 115, 1037, 1306
BstNI CCWGG 1 cut(s) 398
BstNSI RCATGY 1 cut(s) 359
BstSCI CCNGG 4 cut(s) 165, 396, 778, 1506
BstSFI CTRYAG 1 cut(s) 213
BstSLI GKGCMC 1 cut(s) 1325
BstV1I GCAGC 8 cut(s) 17, 20, 199, 227, 430, 847, 1312, 1360
BstX2I RGATCY 1 cut(s) 837
BstYI RGATCY 1 cut(s) 837
Bsu36I CCTNAGG 1 cut(s) 1389
BsuRI GGCC 6 cut(s) 274, 322, 462, 486, 1017, 1323
BtgZI GCGATG 1 cut(s) 1012
BtsCI GGATG 4 cut(s) 649, 686, 1069, 1126
BveI ACCTGC 1 cut(s) 801
Cac8I GCNNGC 6 cut(s) 423, 449, 1015, 1083, 1378, 1527
CaiI CAGNNNCTG 2 cut(s) 1136, 1306
CciI TCATGA 2 cut(s) 265, 889
Cfr13I GGNCC 7 cut(s) 131, 320, 485, 898, 1321, 1322, 1415
CseI GACGC 1 cut(s) 1337
Csp6I GTAC 2 cut(s) 876, 1195
CviQI GTAC 2 cut(s) 876, 1195
DdeI CTNAG 9 cut(s) 392, 412, 438, 522, 734, 1098, 1389, 1441, 1551
DpnI GATC 5 cut(s) 103, 236, 444, 839, 851
DpnII GATC 5 cut(s) 101, 234, 442, 837, 849
DraI TTTAAA 2 cut(s) 84, 729
DrdI GACNNNNNNGTC 1 cut(s) 202
DseDI GACNNNNNNGTC 1 cut(s) 202
EaeI YGGCCR 1 cut(s) 1015
Eam1104I CTCTTC 3 cut(s) 145, 747, 1571
EarI CTCTTC 3 cut(s) 145, 747, 1571
Eco130I CCWWGG 2 cut(s) 463, 1263
Eco24I GRGCYC 1 cut(s) 1325
Eco32I GATATC 2 cut(s) 673, 1237
Eco47I GGWCC 3 cut(s) 131, 898, 1415
Eco57I CTGAAG 2 cut(s) 728, 900
Eco81I CCTNAGG 1 cut(s) 1389
Eco88I CYCGRG 1 cut(s) 188
EcoNI CCTNNNNNAGG 1 cut(s) 456
EcoO109I RGGNCCY 4 cut(s) 131, 898, 1321, 1322
EcoRII CCWGG 1 cut(s) 396
EcoRV GATATC 2 cut(s) 673, 1237
EcoT14I CCWWGG 2 cut(s) 463, 1263
EcoT38I GRGCYC 1 cut(s) 1325
ErhI CCWWGG 2 cut(s) 463, 1263
FalI AAGNNNNNCTT 2 cut(s) 1478, 1510
Fnu4HI GCNGC 8 cut(s) 6, 9, 213, 216, 419, 861, 1301, 1374
FokI GGATG 4 cut(s) 656, 673, 1056, 1133
FriOI GRGCYC 1 cut(s) 1325
Fsp4HI GCNGC 8 cut(s) 6, 9, 213, 216, 419, 861, 1301, 1374
FspBI CTAG 2 cut(s) 681, 917
GluI GCNGC 8 cut(s) 6, 9, 213, 216, 419, 861, 1301, 1374
GsaI CCCAGC 1 cut(s) 225
HaeIII GGCC 6 cut(s) 274, 322, 462, 486, 1017, 1323
HapII CCGG 3 cut(s) 167, 780, 1508
HgaI GACGC 1 cut(s) 1337
Hin1I GRCGYC 1 cut(s) 1329
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HindIII AAGCTT 2 cut(s) 107, 658
HinfI GANTC 8 cut(s) 71, 123, 229, 345, 569, 1174, 1282, 1465
HpaII CCGG 3 cut(s) 167, 780, 1508
HphI GGTGA 4 cut(s) 205, 394, 1183, 1474
Hpy166II GTNNAC 2 cut(s) 207, 568
Hpy188I TCNGA 9 cut(s) 128, 234, 370, 535, 737, 747, 1281, 1422, 1575
Hpy188III TCNNGA 9 cut(s) 238, 266, 521, 681, 890, 1073, 1130, 1178, 1388
Hpy8I GTNNAC 2 cut(s) 207, 568
HpyAV CCTTC 5 cut(s) 285, 379, 889, 1343, 1453
HpyCH4III ACNGT 1 cut(s) 1191
HpyCH4V TGCA 7 cut(s) 215, 301, 785, 907, 996, 1300, 1380
HpyF10VI GCNNNNNNNGC 4 cut(s) 94, 115, 1037, 1306
HpyF3I CTNAG 9 cut(s) 392, 412, 438, 522, 734, 1098, 1389, 1441, 1551
Hsp92I GRCGYC 1 cut(s) 1329
Kzo9I GATC 5 cut(s) 101, 234, 442, 837, 849
LmnI GCTCC 3 cut(s) 523, 598, 1047
Lsp1109I GCAGC 8 cut(s) 17, 20, 199, 227, 430, 847, 1312, 1360
LweI GCATC 4 cut(s) 410, 695, 931, 1123
MaeI CTAG 2 cut(s) 681, 917
MaeIII GTNAC 3 cut(s) 193, 495, 962
MalI GATC 5 cut(s) 103, 236, 444, 839, 851
MboI GATC 5 cut(s) 101, 234, 442, 837, 849
MboII GAAGA 5 cut(s) 132, 211, 319, 468, 734
MflI RGATCY 1 cut(s) 837
MhlI GDGCHC 1 cut(s) 1325
MlsI TGGCCA 1 cut(s) 1017
MluNI TGGCCA 1 cut(s) 1017
MlyI GAGTC 3 cut(s) 80, 238, 563
MmeI TCCRAC 1 cut(s) 558
Mox20I TGGCCA 1 cut(s) 1017
MroXI GAANNNNTTC 1 cut(s) 179
MscI TGGCCA 1 cut(s) 1017
MseI TTAA 5 cut(s) 83, 261, 543, 728, 854
MslI CAYNNNNRTG 2 cut(s) 360, 1092
Msp20I TGGCCA 1 cut(s) 1017
MspA1I CMGCKG 2 cut(s) 212, 1205
MspI CCGG 3 cut(s) 167, 780, 1508
MspR9I CCNGG 4 cut(s) 167, 398, 780, 1508
Mva1269I GAATGC 1 cut(s) 468
MvaI CCWGG 1 cut(s) 398
MwoI GCNNNNNNNGC 4 cut(s) 94, 115, 1037, 1306
NciI CCSGG 3 cut(s) 167, 780, 1508
NdeII GATC 5 cut(s) 101, 234, 442, 837, 849
NlaIV GGNNCC 3 cut(s) 777, 1322, 1323
NmuCI GTSAC 2 cut(s) 193, 495
NspI RCATGY 1 cut(s) 359
NspV TTCGAA 1 cut(s) 1147
PaeR7I CTCGAG 1 cut(s) 188
PagI TCATGA 2 cut(s) 265, 889
PctI GAATGC 1 cut(s) 468
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 5 cut(s) 123, 345, 1174, 1282, 1465
PfoI TCCNGGA 1 cut(s) 165
PkrI GCNGC 8 cut(s) 7, 10, 214, 217, 420, 862, 1302, 1375
PleI GAGTC 3 cut(s) 79, 237, 563
PpsI GAGTC 3 cut(s) 79, 237, 563
PpuMI RGGWCCY 2 cut(s) 131, 898
PshBI ATTAAT 1 cut(s) 261
Psp5II RGGWCCY 2 cut(s) 131, 898
Psp6I CCWGG 1 cut(s) 396
PspFI CCCAGC 1 cut(s) 221
PspGI CCWGG 1 cut(s) 396
PspN4I GGNNCC 3 cut(s) 777, 1322, 1323
PspOMI GGGCCC 1 cut(s) 1321
PspPI GGNCC 7 cut(s) 131, 320, 485, 898, 1321, 1322, 1415
PspPPI RGGWCCY 2 cut(s) 131, 898
PspXI VCTCGAGB 1 cut(s) 188
PstI CTGCAG 1 cut(s) 217
PstNI CAGNNNCTG 2 cut(s) 1136, 1306
PsuI RGATCY 1 cut(s) 837
PvuII CAGCTG 2 cut(s) 212, 1205
RsaI GTAC 2 cut(s) 877, 1196
RsaNI GTAC 2 cut(s) 876, 1195
RseI CAYNNNNRTG 2 cut(s) 360, 1092
SaqAI TTAA 5 cut(s) 83, 261, 543, 728, 854
SatI GCNGC 8 cut(s) 6, 9, 213, 216, 419, 861, 1301, 1374
Sau3AI GATC 5 cut(s) 101, 234, 442, 837, 849
Sau96I GGNCC 7 cut(s) 131, 320, 485, 898, 1321, 1322, 1415
ScaI AGTACT 1 cut(s) 877
SchI GAGTC 3 cut(s) 80, 238, 563
ScrFI CCNGG 4 cut(s) 167, 398, 780, 1508
SduI GDGCHC 1 cut(s) 1325
SfaNI GCATC 4 cut(s) 410, 695, 931, 1123
SfcI CTRYAG 1 cut(s) 213
Sfr274I CTCGAG 1 cut(s) 188
SfuI TTCGAA 1 cut(s) 1147
SinI GGWCC 3 cut(s) 131, 898, 1415
SlaI CTCGAG 1 cut(s) 188
SmiMI CAYNNNNRTG 2 cut(s) 360, 1092
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SspI AATATT 1 cut(s) 1296
SspMI CTAG 2 cut(s) 681, 917
StyD4I CCNGG 4 cut(s) 165, 396, 778, 1506
StyI CCWWGG 2 cut(s) 463, 1263
TaaI ACNGT 1 cut(s) 1191
TaqI TCGA 7 cut(s) 189, 239, 572, 609, 758, 1147, 1239
TatI WGTACW 1 cut(s) 875
TfiI GAWTC 5 cut(s) 123, 345, 1174, 1282, 1465
Tru1I TTAA 5 cut(s) 83, 261, 543, 728, 854
Tru9I TTAA 5 cut(s) 83, 261, 543, 728, 854
TseFI GTSAC 2 cut(s) 193, 495
TseI GCWGC 8 cut(s) 5, 8, 212, 215, 418, 860, 1300, 1373
Tsp45I GTSAC 2 cut(s) 193, 495
TspDTI ATGAA 6 cut(s) 132, 188, 319, 970, 1035, 1169
TspGWI ACGGA 1 cut(s) 1082
VpaK11BI GGWCC 3 cut(s) 131, 898, 1415
VspI ATTAAT 1 cut(s) 261
XagI CCTNNNNNAGG 1 cut(s) 456
XapI RAATTY 2 cut(s) 720, 1110
XbaI TCTAGA 1 cut(s) 680
XceI RCATGY 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 188
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 2 cut(s) 681, 917
ZrmI AGTACT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.