Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005196

Physical Location & Seq

Genomic Coordinates Reverse (-)

2855106 .. 2856942

Gene Structure 1837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G038000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

GAGGCTATGTCCAAGAAAATCTTTTTGACTGGAGTTCCTGGAATGAGACACCTCCCCACAAAGAGCAACAGGGAAGCTTGGGCATTAGCAAAGGAGGCTAGCACTTTGATCCTGCAAGTAGTGAAGGAAAGACAGGCAGCAGGATATGAGAAAGACCTCTTTCAAATGATTCTTGAGGGTGCTCGAAACACTGACCTCAGCCCAGAAGCAACAGACCGCTTCATTGTTGATAATTGCAAGAACATTTACTTGGCCGGCTATGAAACCACAGCAGTTTCAGCCACTTGGTGCCTCATGCTGTTGGCTTCAAATCAAGAATGGCAAGAACGTGTCAGAGCACAGATCCTTCAGATTTTCCGAGGCCGGATTCCTGATAACGAAATGGTTCGCAAGATGAAACAGCTAACAATGGTGATTCATGAAACACTGCGGCTATATCCACCAGTTACTGTGGTGTCAAGGGAGGCTTTCAAGGACATGAAATTTGGGGACATAAATGTTCCGAAGGGTGTCAATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

174

Amino Acids

19.73

Weight (kDa)

9.12

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005196)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g09110 FvH4_7g09111 FvH4_7g09111
malus_domestica	MD02G1221300.v1.1 MD07G1095000.v1.1 MD07G1095100.v1.1
prunus_persica	Prupe.2G119500_v2.0.a1 Prupe.2G119600_v2.0.a1 Prupe.2G119700_v2.0.a1 Prupe.6G038000_v2.0.a1
pyrus_communis	pycom02g18640 pycom07g07830 pycom07g07850
rosa_chinensis	RchiOBHm_Chr1g0344981
rosa_laevigata	RLG00000028863 RLG00000028864
rosa_multiflora	Rmu_co8441511.1_g000001 Rmu_sc0001143.1_g000030 Rmu_sc0008167.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309450 Rroxscaffold_4G00309480
rosa_rugosa	Rorug01G0175400 Rorug01G0175500
rosa_samantha	Rh1AG193300 Rh1BG159700 Rh1BG159900 Rh1CG178400 Rh1DG190500 Rh1DG190600
rosa_wichuraiana	Rw1G015920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	288
AciI	CCGC	2 cut(s)	217, 430
AclWI	GGATC	2 cut(s)	103, 337
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	1 cut(s)	482
AcuI	CTGAAG	1 cut(s)	332
AdeI	CACNNNGTG	1 cut(s)	288
AflIII	ACRYGT	1 cut(s)	328
AgsI	TTSAA	3 cut(s)	164, 309, 472
AjnI	CCWGG	1 cut(s)	37
AjuI	GAANNNNNNNTTGG	2 cut(s)	233, 265
AluBI	AGCT	2 cut(s)	77, 403
AluI	AGCT	2 cut(s)	77, 403
Alw21I	GWGCWC	2 cut(s)	184, 340
Alw26I	GTCTC	1 cut(s)	40
AlwI	GGATC	2 cut(s)	103, 337
AlwNI	CAGNNNCTG	1 cut(s)	449
AoxI	GGCC	2 cut(s)	252, 361
ApeKI	GCWGC	1 cut(s)	137
ApoI	RAATTY	1 cut(s)	482
ArsI	GACNNNNNNTTYG	2 cut(s)	467, 499
Asp700I	GAANNNNTTC	1 cut(s)	384
AsuHPI	GGTGA	1 cut(s)	424
AsuNHI	GCTAGC	1 cut(s)	98
BanI	GGYRCC	1 cut(s)	288
Bbv12I	GWGCWC	2 cut(s)	184, 340
BbvCI	CCTCAGC	1 cut(s)	197
BbvI	GCAGC	1 cut(s)	149
BciT130I	CCWGG	1 cut(s)	39
BcoDI	GTCTC	1 cut(s)	40
BfaI	CTAG	1 cut(s)	99
BisI	GCNGC	2 cut(s)	138, 431
BlsI	GCNGC	2 cut(s)	139, 432
Bme1390I	CCNGG	1 cut(s)	39
BmiI	GGNNCC	1 cut(s)	290
BmrFI	CCNGG	1 cut(s)	39
BmtI	GCTAGC	1 cut(s)	102
BpmI	CTGGAG	1 cut(s)	51
Bpu10I	CCTNAGC	1 cut(s)	197
BpuEI	CTTGAG	1 cut(s)	194
BsaJI	CCNNGG	1 cut(s)	358
Bse118I	RCCGGY	1 cut(s)	254
Bse1I	ACTGG	2 cut(s)	34, 443
BseBI	CCWGG	1 cut(s)	39
BseDI	CCNNGG	1 cut(s)	358
BseMII	CTCAG	1 cut(s)	211
BseNI	ACTGG	2 cut(s)	34, 443
BseXI	GCAGC	1 cut(s)	149
BshFI	GGCC	2 cut(s)	254, 363
BshNI	GGYRCC	1 cut(s)	288
BsiHKAI	GWGCWC	2 cut(s)	184, 340
BsiSI	CCGG	2 cut(s)	255, 364
BslFI	GGGAC	1 cut(s)	503
BsmAI	GTCTC	1 cut(s)	40
BsmFI	GGGAC	1 cut(s)	503
BsnI	GGCC	2 cut(s)	254, 363
Bsp1286I	GDGCHC	2 cut(s)	184, 340
Bsp143I	GATC	2 cut(s)	108, 342
BspACI	CCGC	2 cut(s)	217, 430
BspANI	GGCC	2 cut(s)	254, 363
BspCNI	CTCAG	1 cut(s)	210
BspHI	TCATGA	1 cut(s)	418
BspLI	GGNNCC	1 cut(s)	290
BspOI	GCTAGC	1 cut(s)	102
BspPI	GGATC	2 cut(s)	103, 337
BspT107I	GGYRCC	1 cut(s)	288
BsrFI	RCCGGY	1 cut(s)	254
BsrI	ACTGG	2 cut(s)	34, 443
BssAI	RCCGGY	1 cut(s)	254
BssECI	CCNNGG	1 cut(s)	358
BssMI	GATC	2 cut(s)	108, 342
Bst2UI	CCWGG	1 cut(s)	39
Bst4CI	ACNGT	1 cut(s)	451
BstC8I	GCNNGC	2 cut(s)	100, 256
BstDEI	CTNAG	1 cut(s)	197
BstKTI	GATC	2 cut(s)	111, 345
BstMAI	GTCTC	1 cut(s)	40
BstMBI	GATC	2 cut(s)	108, 342
BstMWI	GCNNNNNNNGC	2 cut(s)	95, 278
BstNI	CCWGG	1 cut(s)	39
BstSCI	CCNGG	1 cut(s)	37
BstV1I	GCAGC	1 cut(s)	149
BstX2I	RGATCY	1 cut(s)	342
BstYI	RGATCY	1 cut(s)	342
BsuRI	GGCC	2 cut(s)	254, 363
BtsI	GCAGTG	1 cut(s)	425
BtsIMutI	CAGTG	2 cut(s)	189, 425
Cac8I	GCNNGC	2 cut(s)	100, 256
CaiI	CAGNNNCTG	1 cut(s)	449
CciI	TCATGA	1 cut(s)	418
Cfr10I	RCCGGY	1 cut(s)	254
CviAII	CATG	3 cut(s)	295, 419, 478
DdeI	CTNAG	1 cut(s)	197
DpnI	GATC	2 cut(s)	110, 344
DpnII	GATC	2 cut(s)	108, 342
DraIII	CACNNNGTG	1 cut(s)	288
EaeI	YGGCCR	1 cut(s)	252
Eco57I	CTGAAG	1 cut(s)	332
EcoRII	CCWGG	1 cut(s)	37
FaeI	CATG	3 cut(s)	298, 422, 481
FaiI	YATR	8 cut(s)	8, 147, 261, 296, 420, 436, 479, 494
FalI	AAGNNNNNCTT	3 cut(s)	37, 451, 483
FaqI	GGGAC	1 cut(s)	503
FatI	CATG	3 cut(s)	294, 418, 477
Fnu4HI	GCNGC	2 cut(s)	138, 431
Fsp4HI	GCNGC	2 cut(s)	138, 431
FspBI	CTAG	1 cut(s)	99
GluI	GCNGC	2 cut(s)	138, 431
GsuI	CTGGAG	1 cut(s)	51
HaeIII	GGCC	2 cut(s)	254, 363
HapII	CCGG	2 cut(s)	255, 364
Hin1II	CATG	3 cut(s)	298, 422, 481
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	3 cut(s)	169, 367, 415
HpaII	CCGG	2 cut(s)	255, 364
HphI	GGTGA	1 cut(s)	424
Hpy188I	TCNGA	4 cut(s)	335, 351, 359, 504
Hpy188III	TCNNGA	4 cut(s)	173, 314, 371, 419
HpyAV	CCTTC	3 cut(s)	118, 356, 499
HpyCH4III	ACNGT	1 cut(s)	451
HpyCH4IV	ACGT	1 cut(s)	328
HpyCH4V	TGCA	2 cut(s)	115, 237
HpyF10VI	GCNNNNNNNGC	2 cut(s)	95, 278
HpyF3I	CTNAG	1 cut(s)	197
HpySE526I	ACGT	1 cut(s)	328
Hsp92II	CATG	3 cut(s)	298, 422, 481
KroI	GCCGGC	1 cut(s)	254
KroNI	GCCGGC	1 cut(s)	256
Kzo9I	GATC	2 cut(s)	108, 342
Lsp1109I	GCAGC	1 cut(s)	149
MaeI	CTAG	1 cut(s)	99
MaeII	ACGT	1 cut(s)	328
MaeIII	GTNAC	1 cut(s)	445
MalI	GATC	2 cut(s)	110, 344
MboI	GATC	2 cut(s)	108, 342
MflI	RGATCY	1 cut(s)	342
MhlI	GDGCHC	2 cut(s)	184, 340
MluCI	AATT	2 cut(s)	232, 482
MnlI	CCTC	8 cut(s)	62, 88, 167, 169, 206, 302, 353, 457
MroNI	GCCGGC	1 cut(s)	254
MroXI	GAANNNNTTC	1 cut(s)	384
MspI	CCGG	2 cut(s)	255, 364
MspR9I	CCNGG	1 cut(s)	39
MvaI	CCWGG	1 cut(s)	39
MwoI	GCNNNNNNNGC	2 cut(s)	95, 278
NaeI	GCCGGC	1 cut(s)	256
NdeII	GATC	2 cut(s)	108, 342
NgoMIV	GCCGGC	1 cut(s)	254
NheI	GCTAGC	1 cut(s)	98
NlaIII	CATG	3 cut(s)	298, 422, 481
NlaIV	GGNNCC	1 cut(s)	290
PagI	TCATGA	1 cut(s)	418
PdiI	GCCGGC	1 cut(s)	256
PdmI	GAANNNNTTC	1 cut(s)	384
PfeI	GAWTC	3 cut(s)	169, 367, 415
PfoI	TCCNGGA	1 cut(s)	37
PkrI	GCNGC	2 cut(s)	139, 432
Psp6I	CCWGG	1 cut(s)	37
PspGI	CCWGG	1 cut(s)	37
PspN4I	GGNNCC	1 cut(s)	290
PstNI	CAGNNNCTG	1 cut(s)	449
PsuI	RGATCY	1 cut(s)	342
SatI	GCNGC	2 cut(s)	138, 431
Sau3AI	GATC	2 cut(s)	108, 342
ScrFI	CCNGG	1 cut(s)	39
SduI	GDGCHC	2 cut(s)	184, 340
SetI	ASST	6 cut(s)	54, 79, 159, 198, 331, 405
SmlI	CTYRAG	1 cut(s)	173
SmoI	CTYRAG	1 cut(s)	173
Sse9I	AATT	2 cut(s)	232, 482
SsiI	CCGC	2 cut(s)	217, 430
SspMI	CTAG	1 cut(s)	99
StyD4I	CCNGG	1 cut(s)	37
TaaI	ACNGT	1 cut(s)	451
TaiI	ACGT	1 cut(s)	331
TaqI	TCGA	1 cut(s)	184
TasI	AATT	2 cut(s)	232, 482
TauI	GCSGC	1 cut(s)	433
TfiI	GAWTC	3 cut(s)	169, 367, 415
TscAI	CASTG	2 cut(s)	196, 432
TseI	GCWGC	1 cut(s)	137
TspDTI	ATGAA	6 cut(s)	211, 276, 407, 410, 435, 494
TspRI	CASTG	2 cut(s)	196, 432
XapI	RAATTY	1 cut(s)	482
XmnI	GAANNNNTTC	1 cut(s)	384
XspI	CTAG	1 cut(s)	99

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.