Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g09110 FvH4_7g09111 FvH4_7g09111 |
| malus_domestica | MD02G1221300.v1.1 MD07G1095000.v1.1 MD07G1095100.v1.1 |
| prunus_persica | Prupe.2G119500_v2.0.a1 Prupe.2G119600_v2.0.a1 Prupe.2G119700_v2.0.a1 Prupe.6G038000_v2.0.a1 |
| pyrus_communis | pycom02g18640 pycom07g07830 pycom07g07850 |
| rosa_chinensis | RchiOBHm_Chr1g0344981 |
| rosa_laevigata | RLG00000028863 RLG00000028864 |
| rosa_multiflora | Rmu_co8441511.1_g000001 Rmu_sc0001143.1_g000030 Rmu_sc0008167.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00309450 Rroxscaffold_4G00309480 |
| rosa_rugosa | Rorug01G0175400 Rorug01G0175500 |
| rosa_samantha | Rh1AG193300 Rh1BG159700 Rh1BG159900 Rh1CG178400 Rh1DG190500 Rh1DG190600 |
| rosa_wichuraiana | Rw1G015920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 223 |
| AciI | CCGC | 2 cut(s) | 51, 86 |
| AclI | AACGTT | 1 cut(s) | 340 |
| AcsI | RAATTY | 2 cut(s) | 293, 415 |
| AcuI | CTGAAG | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 12, 41, 76 |
| AgsI | TTSAA | 1 cut(s) | 337 |
| AluBI | AGCT | 2 cut(s) | 203, 253 |
| AluI | AGCT | 2 cut(s) | 203, 253 |
| Alw26I | GTCTC | 1 cut(s) | 277 |
| ApoI | RAATTY | 2 cut(s) | 293, 415 |
| AsuC2I | CCSGG | 1 cut(s) | 42 |
| BanI | GGYRCC | 1 cut(s) | 223 |
| BauI | CACGAG | 1 cut(s) | 320 |
| BccI | CCATC | 3 cut(s) | 170, 302, 367 |
| BcnI | CCSGG | 1 cut(s) | 42 |
| BcoDI | GTCTC | 1 cut(s) | 277 |
| BfaI | CTAG | 1 cut(s) | 305 |
| BfmI | CTRYAG | 1 cut(s) | 96 |
| Bme1390I | CCNGG | 1 cut(s) | 42 |
| BmiI | GGNNCC | 3 cut(s) | 55, 90, 225 |
| BmrFI | CCNGG | 1 cut(s) | 42 |
| BmsI | GCATC | 1 cut(s) | 291 |
| BpmI | CTGGAG | 1 cut(s) | 45 |
| Bpu10I | CCTNAGC | 2 cut(s) | 147, 254 |
| BpuMI | CCSGG | 1 cut(s) | 42 |
| BsaJI | CCNNGG | 1 cut(s) | 357 |
| BsaWI | WCCGGW | 1 cut(s) | 369 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 12, 41, 76 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| BseDI | CCNNGG | 1 cut(s) | 357 |
| BseGI | GGATG | 2 cut(s) | 306, 378 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 12, 41, 76 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BshNI | GGYRCC | 1 cut(s) | 223 |
| BsiSI | CCGG | 2 cut(s) | 41, 370 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 12, 41, 76 |
| BsmAI | GTCTC | 1 cut(s) | 277 |
| BsmI | GAATGC | 1 cut(s) | 358 |
| BspACI | CCGC | 2 cut(s) | 51, 86 |
| BspLI | GGNNCC | 3 cut(s) | 55, 90, 225 |
| BspMAI | CTGCAG | 1 cut(s) | 100 |
| BspT107I | GGYRCC | 1 cut(s) | 223 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssECI | CCNNGG | 1 cut(s) | 357 |
| BssSI | CACGAG | 1 cut(s) | 320 |
| BssT1I | CCWWGG | 1 cut(s) | 357 |
| Bst2BI | CACGAG | 1 cut(s) | 320 |
| BstDEI | CTNAG | 4 cut(s) | 147, 254, 347, 363 |
| BstF5I | GGATG | 2 cut(s) | 306, 378 |
| BstMAI | GTCTC | 1 cut(s) | 277 |
| BstSCI | CCNGG | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 1 cut(s) | 96 |
| BtsCI | GGATG | 2 cut(s) | 306, 378 |
| CviJI | RGCY | 5 cut(s) | 135, 180, 203, 253, 362 |
| CviKI_1 | RGCY | 5 cut(s) | 135, 180, 203, 253, 362 |
| DdeI | CTNAG | 4 cut(s) | 147, 254, 347, 363 |
| Eco130I | CCWWGG | 1 cut(s) | 357 |
| Eco57I | CTGAAG | 1 cut(s) | 233 |
| EcoRI | GAATTC | 1 cut(s) | 415 |
| EcoT14I | CCWWGG | 1 cut(s) | 357 |
| ErhI | CCWWGG | 1 cut(s) | 357 |
| FaiI | YATR | 8 cut(s) | 29, 49, 84, 118, 131, 144, 173, 183 |
| FokI | GGATG | 2 cut(s) | 313, 385 |
| FspBI | CTAG | 1 cut(s) | 305 |
| GsuI | CTGGAG | 1 cut(s) | 45 |
| HapII | CCGG | 2 cut(s) | 41, 370 |
| HinfI | GANTC | 1 cut(s) | 153 |
| HpaII | CCGG | 2 cut(s) | 41, 370 |
| Hpy188I | TCNGA | 1 cut(s) | 276 |
| HpyAV | CCTTC | 3 cut(s) | 45, 80, 319 |
| HpyCH4IV | ACGT | 1 cut(s) | 340 |
| HpyCH4V | TGCA | 4 cut(s) | 98, 120, 217, 380 |
| HpyF3I | CTNAG | 4 cut(s) | 147, 254, 347, 363 |
| HpySE526I | ACGT | 1 cut(s) | 340 |
| LpnPI | CCDG | 5 cut(s) | 54, 61, 75, 108, 383 |
| LweI | GCATC | 1 cut(s) | 291 |
| MaeI | CTAG | 1 cut(s) | 305 |
| MaeII | ACGT | 1 cut(s) | 340 |
| MaeIII | GTNAC | 1 cut(s) | 421 |
| MboII | GAAGA | 1 cut(s) | 239 |
| MluCI | AATT | 2 cut(s) | 293, 415 |
| MnlI | CCTC | 2 cut(s) | 102, 324 |
| MspI | CCGG | 2 cut(s) | 41, 370 |
| MspR9I | CCNGG | 1 cut(s) | 42 |
| Mva1269I | GAATGC | 1 cut(s) | 358 |
| NciI | CCSGG | 1 cut(s) | 42 |
| NlaIV | GGNNCC | 3 cut(s) | 55, 90, 225 |
| NmuCI | GTSAC | 1 cut(s) | 421 |
| PctI | GAATGC | 1 cut(s) | 358 |
| PfeI | GAWTC | 1 cut(s) | 153 |
| Psp1406I | AACGTT | 1 cut(s) | 340 |
| PspN4I | GGNNCC | 3 cut(s) | 55, 90, 225 |
| PstI | CTGCAG | 1 cut(s) | 100 |
| ScrFI | CCNGG | 1 cut(s) | 42 |
| SetI | ASST | 6 cut(s) | 205, 255, 271, 335, 343, 437 |
| SfaNI | GCATC | 1 cut(s) | 291 |
| SfcI | CTRYAG | 1 cut(s) | 96 |
| Sse9I | AATT | 2 cut(s) | 293, 415 |
| SsiI | CCGC | 2 cut(s) | 51, 86 |
| SspMI | CTAG | 1 cut(s) | 305 |
| StyD4I | CCNGG | 1 cut(s) | 40 |
| StyI | CCWWGG | 1 cut(s) | 357 |
| TaiI | ACGT | 1 cut(s) | 343 |
| TaqI | TCGA | 1 cut(s) | 291 |
| TasI | AATT | 2 cut(s) | 293, 415 |
| TfiI | GAWTC | 1 cut(s) | 153 |
| TseFI | GTSAC | 1 cut(s) | 421 |
| Tsp45I | GTSAC | 1 cut(s) | 421 |
| TspGWI | ACGGA | 1 cut(s) | 409 |
| XapI | RAATTY | 2 cut(s) | 293, 415 |
| XspI | CTAG | 1 cut(s) | 305 |