MD13G1282000.v1.1
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
41193854 .. 41205901
12048 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1282000.v1.1.491

Sequence Viewer

Length: 1593 bp
ATGTCGCGCTGCTTTCCATTTCCTCCACCCGGATATGAAAAAAAGGCTAGGGCAGATGATGTGGACTTGCTGAAAAAGGAGAAGCACAGAGAAAAGAAGCATAAGAAGGAAAAGAAGGACAAAGAGAAGAGACAGAGTAAAGAAAAAAGTGATGGAAAGCATCGGGAAAAGAAAGACAAGAAGGAAAAAAAGAGAGACAAATGGAAGGATAAGGAGAAAGACAAGGACCTGGTTAAAGACAAAATTAGTACCTCAGATGAGAAGAGAGTTCCAGGAAAAAACAAGGGTCATGGTGAAGAGAGATACATTCAGAAAGAGTACAAGGGCAACTGTATTGACAAGAGAATTACGGGAAAAATTGGAGGTTATCAGGCAGAGAAACTCGGTCAGTACCGTTATCTGGCTGAGCAAAACCAGAATTCTGTATCGGTGGAGTTGGGTACAAGGAGTAAACATGAGGCCAGGGCAATTGGTAACCATCTGGTTGAGAAGATTACTGAATTAGACGGAAACAAGGATGAGGGGATGGTTGGATTGCTGACCAAGGGTACTGACATTTTGGCCAAAGTTAAGGAAAAGAACAAGGATAGGAGAGTTGATGACAGAAGGACAGATGGGCAAGGAGTCAGGGGGGCAGCACAGGTTAGTGGGAACACGATGGTTCAGAACCTTCTTGGTGTGGTTGAACCTAAAGTTGGACTTTCCAGACCATTGGCGAGCAACGTGGATAGAAAGATTGTTGGAAAAGAAAAGACCAAAGAGAAGGAAGGTGGTGACAAATGCAAGGACAAACATAGAGAGAAGAAAAAACAAGGGATAGACAAGGACAAAGATAAAGAGAAGAAAAATGAAGCGAAAGCAAAGGAGAAAATTGAATCTAAGAAAGGAGAGTCATATAAAGAGAAGAAAAAGGAAGAGAAAGCAAAGGAGAAAAATGAAACTAAGAATGCAGAGCCAGATAAATTAAGAAAGAGCAATAAAGAGGATCACATAGATTCCCATAGTGTTATAACCTCCCAGCTTCCAGAGGACAGCAACAAAACTGCTGGTGCTGATGGAAATCTTAAGAAACGAAAGGACATACAGATGAATGGAGTTGTGCATGCCGATGATATTAGGCCCAGTAAACTGTCGAGACCACCTTCTTCCTCTCATCAATTGCCAGTAAATGGAAGAACACTGGAACCTTGCCAAAATTCCATCCCATATGTGTCAGATAGGCTGGGTGCAGCAAATAACATTAAGGTGGACGTTAAGGACTTCAAGATAAATGGTAGTGGTGAAGCTCCGTCATTGGCCATCTCCACTACAAAGCCGACATCTACAGCTACACAGGCTGTGCCTATTGCTGAAGCATGCATGAAACCACCCCATCCGGATTCCAGATATCTAAGCCATGTGTATTTGGTTCCGAAATTGGATGAAATGCCTGATCATGACGACCAAGATTGGTTGTTTGGGTGCAGTGATGCCCAATTAAAGAAACCCAAGGTGGAATCTTCAAGGGTTGAGGAGACACCTAAGGTATGGTCAGAGGTCCTGCGGGTAGAGTCAGCTGATGTGCATGCTCTGCCGTATGTCATTCCATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

531

Amino Acids

59.91

Weight (kDa)

9.46

Isoelectric Point (pI)

29.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1010
AccB7I CCANNNNNTGG 1 cut(s) 1169
AccII CGCG 1 cut(s) 7
AccIII TCCGGA 1 cut(s) 1375
AciI CCGC 1 cut(s) 1543
AclWI GGATC 1 cut(s) 993
AcoI YGGCCR 2 cut(s) 561, 1296
AcsI RAATTY 2 cut(s) 418, 1195
AcuI CTGAAG 1 cut(s) 1371
AfaI GTAC 5 cut(s) 250, 320, 392, 442, 550
AfiI CCNNNNNNNGG 4 cut(s) 29, 400, 695, 1169
AflII CTTAAG 1 cut(s) 1064
AgsI TTSAA 4 cut(s) 686, 875, 1264, 1503
AjnI CCWGG 3 cut(s) 228, 271, 461
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
AluBI AGCT 4 cut(s) 1021, 1286, 1328, 1556
AluI AGCT 4 cut(s) 1021, 1286, 1328, 1556
Alw26I GTCTC 4 cut(s) 124, 189, 1129, 1508
AlwI GGATC 1 cut(s) 993
Aor13HI TCCGGA 1 cut(s) 1375
AoxI GGCC 4 cut(s) 459, 561, 1118, 1296
ApeKI GCWGC 3 cut(s) 9, 635, 1229
ApoI RAATTY 2 cut(s) 418, 1195
AspLEI GCGC 1 cut(s) 9
AspS9I GGNCC 3 cut(s) 226, 1119, 1537
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 3 cut(s) 305, 785, 1292
AvaII GGWCC 2 cut(s) 226, 1537
AxyI CCTNAGG 1 cut(s) 1521
BalI TGGCCA 2 cut(s) 563, 1298
BbvI GCAGC 2 cut(s) 647, 1241
BccI CCATC 9 cut(s) 146, 486, 520, 608, 652, 1049, 1208, 1307, 1380
BceAI ACGGC 1 cut(s) 1558
BciT130I CCWGG 3 cut(s) 230, 273, 463
BclI TGATCA 1 cut(s) 1432
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 4 cut(s) 124, 189, 1129, 1508
BfaI CTAG 1 cut(s) 48
BfmI CTRYAG 1 cut(s) 1323
BfrI CTTAAG 1 cut(s) 1064
BisI GCNGC 3 cut(s) 10, 636, 1230
BlpI GCTNAGC 1 cut(s) 405
BlsI GCNGC 3 cut(s) 11, 637, 1231
Bme1390I CCNGG 4 cut(s) 30, 230, 273, 463
Bme18I GGWCC 2 cut(s) 226, 1537
BmgT120I GGNCC 3 cut(s) 226, 1119, 1537
BmiI GGNNCC 2 cut(s) 1185, 1410
BmrFI CCNGG 4 cut(s) 30, 230, 273, 463
BmrI ACTGGG 1 cut(s) 1116
BmsI GCATC 2 cut(s) 169, 1459
BmuI ACTGGG 1 cut(s) 1116
Bpu1102I GCTNAGC 1 cut(s) 405
BpuMI CCSGG 1 cut(s) 30
BsaBI GATNNNNATC 1 cut(s) 1059
BsaI GGTCTC 1 cut(s) 1129
BsaJI CCNNGG 3 cut(s) 462, 543, 1488
BsaWI WCCGGW 1 cut(s) 1375
Bsc4I CCNNNNNNNGG 4 cut(s) 29, 400, 695, 1169
Bse1I ACTGG 3 cut(s) 1122, 1163, 1185
Bse21I CCTNAGG 1 cut(s) 1521
Bse8I GATNNNNATC 1 cut(s) 1059
BseAI TCCGGA 1 cut(s) 1375
BseBI CCWGG 3 cut(s) 230, 273, 463
BseDI CCNNGG 3 cut(s) 462, 543, 1488
BseGI GGATG 5 cut(s) 523, 531, 1200, 1372, 1426
BseJI GATNNNNATC 1 cut(s) 1059
BseLI CCNNNNNNNGG 4 cut(s) 29, 400, 695, 1169
BseMII CTCAG 2 cut(s) 267, 396
BseNI ACTGG 3 cut(s) 1122, 1163, 1185
BseRI GAGGAG 1 cut(s) 1526
BseXI GCAGC 2 cut(s) 647, 1241
BseYI CCCAGC 2 cut(s) 1017, 1222
BsgI GTGCAG 2 cut(s) 1248, 1483
Bsh1236I CGCG 1 cut(s) 7
BshFI GGCC 4 cut(s) 461, 563, 1120, 1298
BsiSI CCGG 2 cut(s) 30, 1376
BslI CCNNNNNNNGG 4 cut(s) 29, 400, 695, 1169
BsmAI GTCTC 4 cut(s) 124, 189, 1129, 1508
BsmI GAATGC 1 cut(s) 952
BsnI GGCC 4 cut(s) 461, 563, 1120, 1298
Bso31I GGTCTC 1 cut(s) 1129
Bsp13I TCCGGA 1 cut(s) 1375
Bsp143I GATC 2 cut(s) 985, 1432
Bsp1720I GCTNAGC 1 cut(s) 405
BspACI CCGC 1 cut(s) 1543
BspANI GGCC 4 cut(s) 461, 563, 1120, 1298
BspCNI CTCAG 2 cut(s) 266, 397
BspEI TCCGGA 1 cut(s) 1375
BspFNI CGCG 1 cut(s) 7
BspHI TCATGA 1 cut(s) 1435
BspLI GGNNCC 2 cut(s) 1185, 1410
BspPI GGATC 1 cut(s) 993
BspTI CTTAAG 1 cut(s) 1064
BspTNI GGTCTC 1 cut(s) 1129
BsrI ACTGG 3 cut(s) 1122, 1163, 1185
BssECI CCNNGG 3 cut(s) 462, 543, 1488
BssMI GATC 2 cut(s) 985, 1432
BssT1I CCWWGG 2 cut(s) 543, 1488
Bst2UI CCWGG 3 cut(s) 230, 273, 463
Bst4CI ACNGT 3 cut(s) 332, 395, 1131
Bst6I CTCTTC 4 cut(s) 122, 257, 291, 909
BstAFI CTTAAG 1 cut(s) 1064
BstAPI GCANNNNNTGC 1 cut(s) 1570
BstC8I GCNNGC 4 cut(s) 718, 1104, 1357, 1566
BstDEI CTNAG 6 cut(s) 253, 405, 879, 942, 1391, 1521
BstEII GGTNACC 1 cut(s) 473
BstF5I GGATG 5 cut(s) 523, 531, 1200, 1372, 1426
BstFNI CGCG 1 cut(s) 7
BstHHI GCGC 1 cut(s) 9
BstKTI GATC 2 cut(s) 988, 1435
BstMAI GTCTC 4 cut(s) 124, 189, 1129, 1508
BstMBI GATC 2 cut(s) 985, 1432
BstMWI GCNNNNNNNGC 2 cut(s) 1334, 1570
BstNI CCWGG 3 cut(s) 230, 273, 463
BstNSI RCATGY 3 cut(s) 1106, 1359, 1568
BstPI GGTNACC 1 cut(s) 473
BstSCI CCNGG 4 cut(s) 28, 228, 271, 461
BstSFI CTRYAG 1 cut(s) 1323
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 2 cut(s) 647, 1241
BstXI CCANNNNNNTGG 1 cut(s) 712
Bsu36I CCTNAGG 1 cut(s) 1521
BsuRI GGCC 4 cut(s) 461, 563, 1120, 1298
BtsCI GGATG 5 cut(s) 523, 531, 1200, 1372, 1426
BtsI GCAGTG 1 cut(s) 1471
BtsIMutI CAGTG 2 cut(s) 1178, 1471
Cac8I GCNNGC 4 cut(s) 718, 1104, 1357, 1566
CciI TCATGA 1 cut(s) 1435
CfoI GCGC 1 cut(s) 9
Cfr13I GGNCC 3 cut(s) 226, 1119, 1537
CsiI ACCWGGT 1 cut(s) 228
Csp6I GTAC 5 cut(s) 249, 319, 391, 441, 549
CviAII CATG 8 cut(s) 290, 455, 1103, 1356, 1360, 1397, 1436, 1565
CviQI GTAC 5 cut(s) 249, 319, 391, 441, 549
DdeI CTNAG 6 cut(s) 253, 405, 879, 942, 1391, 1521
DpnI GATC 2 cut(s) 987, 1434
DpnII GATC 2 cut(s) 985, 1432
EaeI YGGCCR 2 cut(s) 561, 1296
Eam1104I CTCTTC 4 cut(s) 122, 257, 291, 909
EarI CTCTTC 4 cut(s) 122, 257, 291, 909
Eco130I CCWWGG 2 cut(s) 543, 1488
Eco31I GGTCTC 1 cut(s) 1129
Eco32I GATATC 1 cut(s) 1388
Eco47I GGWCC 2 cut(s) 226, 1537
Eco57I CTGAAG 1 cut(s) 1371
Eco81I CCTNAGG 1 cut(s) 1521
Eco91I GGTNACC 1 cut(s) 473
EcoO109I RGGNCCY 2 cut(s) 226, 1537
EcoO65I GGTNACC 1 cut(s) 473
EcoRI GAATTC 1 cut(s) 418
EcoRII CCWGG 3 cut(s) 228, 271, 461
EcoRV GATATC 1 cut(s) 1388
EcoT14I CCWWGG 2 cut(s) 543, 1488
EcoT22I ATGCAT 1 cut(s) 1361
ErhI CCWWGG 2 cut(s) 543, 1488
FaeI CATG 8 cut(s) 293, 458, 1106, 1359, 1363, 1400, 1439, 1568
FalI AAGNNNNNCTT 2 cut(s) 684, 716
FatI CATG 8 cut(s) 289, 454, 1102, 1355, 1359, 1396, 1435, 1564
FauI CCCGC 1 cut(s) 1536
FauNDI CATATG 1 cut(s) 1207
FbaI TGATCA 1 cut(s) 1432
Fnu4HI GCNGC 3 cut(s) 10, 636, 1230
FokI GGATG 5 cut(s) 530, 538, 1187, 1359, 1433
Fsp4HI GCNGC 3 cut(s) 10, 636, 1230
FspBI CTAG 1 cut(s) 48
GlaI GCGC 1 cut(s) 8
GluI GCNGC 3 cut(s) 10, 636, 1230
GsaI CCCAGC 2 cut(s) 1021, 1226
HaeIII GGCC 4 cut(s) 461, 563, 1120, 1298
HapII CCGG 2 cut(s) 30, 1376
HhaI GCGC 1 cut(s) 9
Hin1II CATG 8 cut(s) 293, 458, 1106, 1359, 1363, 1400, 1439, 1568
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HinfI GANTC 7 cut(s) 624, 875, 890, 995, 1379, 1496, 1550
HpaII CCGG 2 cut(s) 30, 1376
HphI GGTGA 3 cut(s) 305, 785, 1292
Hpy166II GTNNAC 4 cut(s) 64, 452, 1127, 1249
Hpy188I TCNGA 6 cut(s) 256, 312, 666, 1216, 1413, 1534
Hpy188III TCNNGA 8 cut(s) 164, 705, 1025, 1134, 1264, 1376, 1383, 1436
Hpy8I GTNNAC 4 cut(s) 64, 452, 1127, 1249
HpyAV CCTTC 9 cut(s) 100, 109, 175, 199, 600, 680, 757, 761, 1152
HpyCH4III ACNGT 3 cut(s) 332, 395, 1131
HpyCH4IV ACGT 2 cut(s) 723, 1251
HpyCH4V TGCA 7 cut(s) 783, 950, 1102, 1229, 1359, 1464, 1564
HpyF10VI GCNNNNNNNGC 2 cut(s) 1334, 1570
HpyF3I CTNAG 6 cut(s) 253, 405, 879, 942, 1391, 1521
HpySE526I ACGT 2 cut(s) 723, 1251
Hsp92II CATG 8 cut(s) 293, 458, 1106, 1359, 1363, 1400, 1439, 1568
HspAI GCGC 1 cut(s) 7
Kpn2I TCCGGA 1 cut(s) 1375
Ksp22I TGATCA 1 cut(s) 1432
Kzo9I GATC 2 cut(s) 985, 1432
LmnI GCTCC 1 cut(s) 1291
Lsp1109I GCAGC 2 cut(s) 647, 1241
LweI GCATC 2 cut(s) 169, 1459
MabI ACCWGGT 1 cut(s) 228
MaeI CTAG 1 cut(s) 48
MaeII ACGT 2 cut(s) 723, 1251
MaeIII GTNAC 2 cut(s) 473, 773
MalI GATC 2 cut(s) 987, 1434
MboI GATC 2 cut(s) 985, 1432
MfeI CAATTG 2 cut(s) 468, 1157
MlsI TGGCCA 2 cut(s) 563, 1298
MluNI TGGCCA 2 cut(s) 563, 1298
MlyI GAGTC 3 cut(s) 633, 899, 1559
MmeI TCCRAC 3 cut(s) 511, 676, 721
Mox20I TGGCCA 2 cut(s) 563, 1298
Mph1103I ATGCAT 1 cut(s) 1361
MroI TCCGGA 1 cut(s) 1375
MscI TGGCCA 2 cut(s) 563, 1298
MseI TTAA 7 cut(s) 234, 570, 965, 1065, 1242, 1254, 1478
MslI CAYNNNNRTG 3 cut(s) 1085, 1107, 1244
Msp20I TGGCCA 2 cut(s) 563, 1298
MspA1I CMGCKG 1 cut(s) 1556
MspCI CTTAAG 1 cut(s) 1064
MspI CCGG 2 cut(s) 30, 1376
MspR9I CCNGG 4 cut(s) 30, 230, 273, 463
MunI CAATTG 2 cut(s) 468, 1157
Mva1269I GAATGC 1 cut(s) 952
MvaI CCWGG 3 cut(s) 230, 273, 463
MvnI CGCG 1 cut(s) 7
MwoI GCNNNNNNNGC 2 cut(s) 1334, 1570
NciI CCSGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 1207
NdeII GATC 2 cut(s) 985, 1432
NlaIII CATG 8 cut(s) 293, 458, 1106, 1359, 1363, 1400, 1439, 1568
NlaIV GGNNCC 2 cut(s) 1185, 1410
NmuCI GTSAC 1 cut(s) 773
NsiI ATGCAT 1 cut(s) 1361
NspI RCATGY 3 cut(s) 1106, 1359, 1568
PaeI GCATGC 3 cut(s) 1106, 1359, 1568
PagI TCATGA 1 cut(s) 1435
PctI GAATGC 1 cut(s) 952
PfeI GAWTC 4 cut(s) 875, 995, 1379, 1496
PflMI CCANNNNNTGG 1 cut(s) 1169
PfoI TCCNGGA 1 cut(s) 271
PkrI GCNGC 3 cut(s) 11, 637, 1231
PleI GAGTC 3 cut(s) 632, 898, 1558
PpsI GAGTC 3 cut(s) 632, 898, 1558
PpuMI RGGWCCY 2 cut(s) 226, 1537
PsiI TTATAA 1 cut(s) 1010
Psp5II RGGWCCY 2 cut(s) 226, 1537
Psp6I CCWGG 3 cut(s) 228, 271, 461
PspEI GGTNACC 1 cut(s) 473
PspFI CCCAGC 2 cut(s) 1017, 1222
PspGI CCWGG 3 cut(s) 228, 271, 461
PspN4I GGNNCC 2 cut(s) 1185, 1410
PspPI GGNCC 3 cut(s) 226, 1119, 1537
PspPPI RGGWCCY 2 cut(s) 226, 1537
PvuII CAGCTG 1 cut(s) 1556
RsaI GTAC 5 cut(s) 250, 320, 392, 442, 550
RsaNI GTAC 5 cut(s) 249, 319, 391, 441, 549
RseI CAYNNNNRTG 3 cut(s) 1085, 1107, 1244
SaqAI TTAA 7 cut(s) 234, 570, 965, 1065, 1242, 1254, 1478
SatI GCNGC 3 cut(s) 10, 636, 1230
Sau3AI GATC 2 cut(s) 985, 1432
Sau96I GGNCC 3 cut(s) 226, 1119, 1537
SchI GAGTC 3 cut(s) 633, 899, 1559
ScrFI CCNGG 4 cut(s) 30, 230, 273, 463
SexAI ACCWGGT 1 cut(s) 228
SfaNI GCATC 2 cut(s) 169, 1459
SfcI CTRYAG 1 cut(s) 1323
SinI GGWCC 2 cut(s) 226, 1537
SmiMI CAYNNNNRTG 3 cut(s) 1085, 1107, 1244
SmlI CTYRAG 1 cut(s) 1064
SmoI CTYRAG 1 cut(s) 1064
SphI GCATGC 3 cut(s) 1106, 1359, 1568
SsiI CCGC 1 cut(s) 1543
SspMI CTAG 1 cut(s) 48
StyD4I CCNGG 4 cut(s) 28, 228, 271, 461
StyI CCWWGG 2 cut(s) 543, 1488
TaaI ACNGT 3 cut(s) 332, 395, 1131
TaiI ACGT 2 cut(s) 726, 1254
TaqI TCGA 1 cut(s) 1133
TaqII GACCGA 1 cut(s) 374
TatI WGTACW 1 cut(s) 318
TfiI GAWTC 4 cut(s) 875, 995, 1379, 1496
Tru1I TTAA 7 cut(s) 234, 570, 965, 1065, 1242, 1254, 1478
Tru9I TTAA 7 cut(s) 234, 570, 965, 1065, 1242, 1254, 1478
TscAI CASTG 2 cut(s) 1185, 1471
TseFI GTSAC 1 cut(s) 773
TseI GCWGC 3 cut(s) 9, 635, 1229
Tsp45I GTSAC 1 cut(s) 773
TspDTI ATGAA 6 cut(s) 51, 864, 951, 1103, 1376, 1437
TspGWI ACGGA 2 cut(s) 522, 1278
TspRI CASTG 2 cut(s) 1185, 1471
Van91I CCANNNNNTGG 1 cut(s) 1169
Vha464I CTTAAG 1 cut(s) 1064
VpaK11BI GGWCC 2 cut(s) 226, 1537
XapI RAATTY 2 cut(s) 418, 1195
XceI RCATGY 3 cut(s) 1106, 1359, 1568
XspI CTAG 1 cut(s) 48
Zsp2I ATGCAT 1 cut(s) 1361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.