Prupe.8G196300_v2.0.a1
MYB Family

Myb-like protein X

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0003553
Physical Location & Seq
Forward (+)
18800837 .. 18806497
5661 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G196300.1

Sequence Viewer

Length: 1671 bp
ATGTCTCGCTGCTTTCCATTTCCTCCTCCAGGATATGAAAAGAAAGTTGGAATCAATGATATAGACTTACTTGCAAAGGAGAAGCACAAGGAGAAAAAGCATAAAAAGGATAAGAAGGACAAAGAGAAAAGAGACGGTAAAGAGAAAAAGGATAAAGACAGAAGTAAAGAAAAACACGGTGAAAGGAAAGACAGAAAAGAAAAGCACAAAGACAAGAAGGAAAGGGGTGGGGATAATGGGATTACTTGGACATCAGAAGAGAAGAGAATTGAAGGGCAGCCAGAGTCTTATAACGGACAGAATCATGTTCCAAACGGATTCCATAATGTTGACATCAAGGATTATAAATATGTGCAGGAATTGGATCGAAGATGTAGGAATGATGACAGAGCTACTGGGAGTCAGGTGGTTCAGAAGATTTTGGTTGCTGATCAAAGATCATTGTTGTCAAATCAGTCCAGAGAAAAAGAGAGAATTAAGGATAAGAAAGAAGTTGATAGGACTGTCAATGCACAAAGAAACCATATCGAGGGAAAAATTGTTCAAAATGTCCCGAGCATTGACCAAAGAAGACTTGAAGGCATTACTAAGCCAATTGAGAAGCAACTGGAAGTCTATAGGAATAGTGAAAGAGCAACAGGAAATCCGGTTGTTCAGAAGATTATGGTTTCTGATAAAAAACCTTTGTTGTCAACTCAGTCCAGAGAAAAAGAGAGAATTAAGGATAAGAAAGAAGATGATAGGACTGCCAATGCACAAAGAAACCATGTCGAGGGAAAATGTTCAGCGGAGGCATTTTTTGAAAACTTCCCTAGCATTGAGCAAAGAAGACTTGAAGGCATTGCTAAGCCAATTGAGAAGGATGTTGAGAAGCAGATGGAGGGAAGAGATCGGAAGAAAAACACAGATAATGACAGTAAAGGTCATAAACCCAAGGAGAGAGATAAAGAGAAGAAAGTTAAATCGAAGGATAAGGACAGGGAGAAGAAGAAAGAGAAGAAGGAGAAGGTGAAGGTGATAAACAAACCATCCGATGAACAGCCTAAACTAGAAGGAAATGGCAAGGAATCCCTAGATGCTTTCAGTAATAAAGCATTAAACCTTTTACAGATGAATAGCAAGAACTCTGCTGCTGGGGGAATTCTTGGCAAACGCAAGGAACTTGAGATGAATGGATATTTACACGAAAATGGATTTCTGCCCCATAAGTTGCCAAGATCTGTTTCTTCTCACCCAGTAGTGGAAAATGGGAGGAAATCAGAACCAAGCCAAACTGTTCTCCAGTTTTTATCAGAGGGACAGGGGGCAGCCAGCGATTGTAAAGCAGATATCAAGGAACACAGAATTAATGGTTTGAGAGGGCCTGAACAACTCAATGCATTCTCAACAAAGCCATCATCTTCTCGTGTTAAAGTTAATGAGAATGGTGGAGCATCTGCAAAACCACCACATCCTGATTCCAAGTATCTGAGTGAGATACTTTCCATTCCCAAGATGGCGGATGAGTCCAATCTTGACGATCAGGAATGGCTGCTCGGCAGCAATGGTTCAGGGTCAAAGAAACCCAAAGTGGGATCCCCTGAGATTGAAATGACTCCCCAAGTATGGGCAGAAGCTATGCAAATAGAGTCTGTGGATGTTTATGCTCTGCCATATGTCATCCCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

557

Amino Acids

63.42

Weight (kDa)

9.43

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 291, 345
AciI CCGC 2 cut(s) 788, 1499
AclWI GGATC 3 cut(s) 372, 1569, 1582
AcsI RAATTY 1 cut(s) 1140
AfiI CCNNNNNNNGG 7 cut(s) 29, 529, 772, 1240, 1571, 1605, 1606
AgsI TTSAA 6 cut(s) 272, 545, 578, 803, 836, 1589
AjnI CCWGG 1 cut(s) 28
AjuI GAANNNNNNNTTGG 4 cut(s) 30, 62, 1207, 1239
AloI GAACNNNNNNTCC 2 cut(s) 525, 557
AluBI AGCT 2 cut(s) 392, 1616
AluI AGCT 2 cut(s) 392, 1616
Alw26I GTCTC 2 cut(s) 9, 126
AlwI GGATC 3 cut(s) 372, 1569, 1582
Ama87I CYCGRG 1 cut(s) 553
AoxI GGCC 1 cut(s) 1361
ApeKI GCWGC 6 cut(s) 9, 277, 1130, 1307, 1531, 1539
ApoI RAATTY 1 cut(s) 1140
AseI ATTAAT 1 cut(s) 1347
Asp700I GAANNNNTTC 1 cut(s) 781
AspS9I GGNCC 1 cut(s) 1361
AsuHPI GGTGA 4 cut(s) 191, 1021, 1027, 1223
AvaI CYCGRG 1 cut(s) 553
BamHI GGATCC 1 cut(s) 1574
BauI CACGAG 1 cut(s) 1404
BbsI GAAGAC 2 cut(s) 577, 835
BbvI GCAGC 5 cut(s) 289, 1117, 1319, 1518, 1551
BccI CCATC 4 cut(s) 871, 1036, 1402, 1489
BciT130I CCWGG 1 cut(s) 30
BclI TGATCA 1 cut(s) 430
BcoDI GTCTC 2 cut(s) 9, 126
BfaI CTAG 3 cut(s) 813, 1049, 1073
BfmI CTRYAG 1 cut(s) 616
BglII AGATCT 1 cut(s) 1217
BisI GCNGC 6 cut(s) 10, 278, 1131, 1308, 1532, 1540
BlpI GCTNAGC 1 cut(s) 846
BlsI GCNGC 6 cut(s) 11, 279, 1132, 1309, 1533, 1541
Bme1390I CCNGG 1 cut(s) 30
BmeT110I CYCGRG 1 cut(s) 553
BmgT120I GGNCC 1 cut(s) 1361
BmiI GGNNCC 1 cut(s) 1576
BmrFI CCNGG 1 cut(s) 30
BmrI ACTGGG 2 cut(s) 405, 1229
BmsI GCATC 2 cut(s) 1066, 1442
BmuI ACTGGG 2 cut(s) 405, 1229
BpiI GAAGAC 2 cut(s) 577, 835
BpmI CTGGAG 2 cut(s) 12, 1265
Bpu1102I GCTNAGC 1 cut(s) 846
BpuEI CTTGAG 1 cut(s) 1184
BsaJI CCNNGG 1 cut(s) 933
BsaWI WCCGGW 1 cut(s) 646
Bsc4I CCNNNNNNNGG 7 cut(s) 29, 529, 772, 1240, 1571, 1605, 1606
Bse1I ACTGG 4 cut(s) 400, 612, 1235, 1282
Bse3DI GCAATG 2 cut(s) 840, 1549
BseBI CCWGG 1 cut(s) 30
BseDI CCNNGG 1 cut(s) 933
BseGI GGATG 6 cut(s) 868, 1028, 1450, 1507, 1642, 1659
BseLI CCNNNNNNNGG 7 cut(s) 29, 529, 772, 1240, 1571, 1605, 1606
BseMI GCAATG 2 cut(s) 840, 1549
BseMII CTCAG 3 cut(s) 710, 1460, 1572
BseNI ACTGG 4 cut(s) 400, 612, 1235, 1282
BseRI GAGGAG 1 cut(s) 15
BseXI GCAGC 5 cut(s) 289, 1117, 1319, 1518, 1551
BseYI CCCAGC 1 cut(s) 1133
BsgI GTGCAG 1 cut(s) 374
BshFI GGCC 1 cut(s) 1363
BsiHKCI CYCGRG 1 cut(s) 553
BsiSI CCGG 1 cut(s) 647
BslFI GGGAC 2 cut(s) 536, 1311
BslI CCNNNNNNNGG 7 cut(s) 29, 529, 772, 1240, 1571, 1605, 1606
BsmAI GTCTC 2 cut(s) 9, 126
BsmBI CGTCTC 1 cut(s) 126
BsmFI GGGAC 2 cut(s) 536, 1311
BsmI GAATGC 1 cut(s) 1379
BsnI GGCC 1 cut(s) 1363
BsoBI CYCGRG 1 cut(s) 553
Bsp143I GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
Bsp1720I GCTNAGC 1 cut(s) 846
BspACI CCGC 2 cut(s) 788, 1499
BspANI GGCC 1 cut(s) 1363
BspCNI CTCAG 3 cut(s) 709, 1461, 1573
BspLI GGNNCC 1 cut(s) 1576
BspPI GGATC 3 cut(s) 372, 1569, 1582
BsrDI GCAATG 2 cut(s) 840, 1549
BsrI ACTGG 4 cut(s) 400, 612, 1235, 1282
BssECI CCNNGG 1 cut(s) 933
BssMI GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
BssSI CACGAG 1 cut(s) 1404
BssT1I CCWWGG 1 cut(s) 933
Bst2BI CACGAG 1 cut(s) 1404
Bst2UI CCWGG 1 cut(s) 30
Bst4CI ACNGT 5 cut(s) 137, 179, 505, 917, 1276
Bst6I CTCTTC 3 cut(s) 252, 257, 880
BstC8I GCNNGC 1 cut(s) 1312
BstDEI CTNAG 5 cut(s) 588, 696, 846, 1469, 1581
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 6 cut(s) 868, 1028, 1450, 1507, 1642, 1659
BstKTI GATC 7 cut(s) 367, 433, 440, 892, 1220, 1522, 1577
BstMAI GTCTC 2 cut(s) 9, 126
BstMBI GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
BstNI CCWGG 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 28
BstSFI CTRYAG 1 cut(s) 616
BstV1I GCAGC 5 cut(s) 289, 1117, 1319, 1518, 1551
BstV2I GAAGAC 2 cut(s) 577, 835
BstX2I RGATCY 2 cut(s) 1217, 1574
BstYI RGATCY 2 cut(s) 1217, 1574
BsuRI GGCC 1 cut(s) 1363
BtsCI GGATG 6 cut(s) 868, 1028, 1450, 1507, 1642, 1659
Cac8I GCNNGC 1 cut(s) 1312
Cfr13I GGNCC 1 cut(s) 1361
CviAII CATG 2 cut(s) 305, 767
DdeI CTNAG 5 cut(s) 588, 696, 846, 1469, 1581
DpnI GATC 7 cut(s) 366, 432, 439, 891, 1219, 1521, 1576
DpnII GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
Eam1104I CTCTTC 3 cut(s) 252, 257, 880
EarI CTCTTC 3 cut(s) 252, 257, 880
EciI GGCGGA 1 cut(s) 1514
Eco130I CCWWGG 1 cut(s) 933
Eco32I GATATC 1 cut(s) 1330
Eco88I CYCGRG 1 cut(s) 553
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 1361
EcoRI GAATTC 1 cut(s) 1140
EcoRII CCWGG 1 cut(s) 28
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 1 cut(s) 933
EcoT22I ATGCAT 1 cut(s) 1381
ErhI CCWWGG 1 cut(s) 933
Esp3I CGTCTC 1 cut(s) 126
FaeI CATG 2 cut(s) 308, 770
FaqI GGGAC 2 cut(s) 536, 1311
FatI CATG 2 cut(s) 304, 766
FauNDI CATATG 1 cut(s) 1654
FbaI TGATCA 1 cut(s) 430
Fnu4HI GCNGC 6 cut(s) 10, 278, 1131, 1308, 1532, 1540
FokI GGATG 6 cut(s) 875, 1015, 1437, 1514, 1646, 1649
Fsp4HI GCNGC 6 cut(s) 10, 278, 1131, 1308, 1532, 1540
FspBI CTAG 3 cut(s) 813, 1049, 1073
GluI GCNGC 6 cut(s) 10, 278, 1131, 1308, 1532, 1540
GsaI CCCAGC 1 cut(s) 1137
GsuI CTGGAG 2 cut(s) 12, 1265
HaeIII GGCC 1 cut(s) 1363
HapII CCGG 1 cut(s) 647
Hin1II CATG 2 cut(s) 308, 770
HincII GTYRAC 2 cut(s) 331, 693
HindII GTYRAC 2 cut(s) 331, 693
HpaII CCGG 1 cut(s) 647
HphI GGTGA 4 cut(s) 191, 1021, 1027, 1223
Hpy166II GTNNAC 2 cut(s) 331, 693
Hpy188I TCNGA 9 cut(s) 256, 414, 657, 673, 894, 1033, 1261, 1294, 1470
Hpy188III TCNNGA 6 cut(s) 459, 553, 702, 1454, 1514, 1523
Hpy8I GTNNAC 2 cut(s) 331, 693
HpyCH4III ACNGT 5 cut(s) 137, 179, 505, 917, 1276
HpyCH4V TGCA 7 cut(s) 74, 355, 512, 755, 1379, 1439, 1621
HpyF3I CTNAG 5 cut(s) 588, 696, 846, 1469, 1581
Hsp92II CATG 2 cut(s) 308, 770
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
LmnI GCTCC 1 cut(s) 1430
Lsp1109I GCAGC 5 cut(s) 289, 1117, 1319, 1518, 1551
LweI GCATC 2 cut(s) 1066, 1442
MaeI CTAG 3 cut(s) 813, 1049, 1073
MalI GATC 7 cut(s) 366, 432, 439, 891, 1219, 1521, 1576
MboI GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
MfeI CAATTG 2 cut(s) 594, 852
MflI RGATCY 2 cut(s) 1217, 1574
MluCI AATT 9 cut(s) 267, 359, 474, 537, 594, 717, 852, 1140, 1344
MlyI GAGTC 5 cut(s) 293, 409, 1514, 1588, 1637
MmeI TCCRAC 1 cut(s) 28
MnlI CCTC 9 cut(s) 33, 36, 523, 766, 784, 874, 1245, 1288, 1352
Mph1103I ATGCAT 1 cut(s) 1381
MroXI GAANNNNTTC 1 cut(s) 781
MseI TTAA 7 cut(s) 477, 720, 960, 1097, 1347, 1410, 1416
MslI CAYNNNNRTG 1 cut(s) 1188
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 1 cut(s) 647
MspR9I CCNGG 1 cut(s) 30
MunI CAATTG 2 cut(s) 594, 852
Mva1269I GAATGC 1 cut(s) 1379
MvaI CCWGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 1654
NdeII GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
NlaIII CATG 2 cut(s) 308, 770
NlaIV GGNNCC 1 cut(s) 1576
NmeAIII GCCGAG 1 cut(s) 1515
NsiI ATGCAT 1 cut(s) 1381
PctI GAATGC 1 cut(s) 1379
PdmI GAANNNNTTC 1 cut(s) 781
PfeI GAWTC 5 cut(s) 51, 301, 318, 1067, 1457
PfoI TCCNGGA 1 cut(s) 28
PkrI GCNGC 6 cut(s) 11, 279, 1132, 1309, 1533, 1541
PleI GAGTC 5 cut(s) 292, 408, 1513, 1588, 1636
PpsI GAGTC 5 cut(s) 292, 408, 1513, 1588, 1636
PshBI ATTAAT 1 cut(s) 1347
PsiI TTATAA 2 cut(s) 291, 345
Psp6I CCWGG 1 cut(s) 28
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 1576
PspPI GGNCC 1 cut(s) 1361
PsuI RGATCY 2 cut(s) 1217, 1574
RseI CAYNNNNRTG 1 cut(s) 1188
SaqAI TTAA 7 cut(s) 477, 720, 960, 1097, 1347, 1410, 1416
SatI GCNGC 6 cut(s) 10, 278, 1131, 1308, 1532, 1540
Sau3AI GATC 7 cut(s) 364, 430, 437, 889, 1217, 1519, 1574
Sau96I GGNCC 1 cut(s) 1361
SchI GAGTC 5 cut(s) 293, 409, 1514, 1588, 1637
ScrFI CCNGG 1 cut(s) 30
SetI ASST 8 cut(s) 394, 408, 685, 925, 1011, 1017, 1104, 1618
SfaNI GCATC 2 cut(s) 1066, 1442
SfcI CTRYAG 1 cut(s) 616
SmiMI CAYNNNNRTG 1 cut(s) 1188
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
Sse9I AATT 9 cut(s) 267, 359, 474, 537, 594, 717, 852, 1140, 1344
SsiI CCGC 2 cut(s) 788, 1499
SspMI CTAG 3 cut(s) 813, 1049, 1073
StyD4I CCNGG 1 cut(s) 28
StyI CCWWGG 1 cut(s) 933
TaaI ACNGT 5 cut(s) 137, 179, 505, 917, 1276
TaqI TCGA 4 cut(s) 367, 528, 771, 965
TasI AATT 9 cut(s) 267, 359, 474, 537, 594, 717, 852, 1140, 1344
TfiI GAWTC 5 cut(s) 51, 301, 318, 1067, 1457
Tru1I TTAA 7 cut(s) 477, 720, 960, 1097, 1347, 1410, 1416
Tru9I TTAA 7 cut(s) 477, 720, 960, 1097, 1347, 1410, 1416
TseI GCWGC 6 cut(s) 9, 277, 1130, 1307, 1531, 1539
TspDTI ATGAA 4 cut(s) 51, 1050, 1127, 1184
TspGWI ACGGA 2 cut(s) 309, 330
VspI ATTAAT 1 cut(s) 1347
XagI CCTNNNNNAGG 1 cut(s) 27
XapI RAATTY 1 cut(s) 1140
XcmI CCANNNNNNNNNTGG 1 cut(s) 1492
XmnI GAANNNNTTC 1 cut(s) 781
XspI CTAG 3 cut(s) 813, 1049, 1073
Zsp2I ATGCAT 1 cut(s) 1381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.