MD14G1121600.v1.1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
19631863 .. 19635781
3919 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1121600.v1.1.491

Sequence Viewer

Length: 1071 bp
ATGGCGTCGGAGGACGTGAAGAGGACCAGTGATTCTGCGGTGTCGACGATTGTGAACCTGGCCGAGGAGGCCAAGCTCGCCAGCGAAGGAGTGAAGGCGCCGACCAGCCATGCTTTGCTTAGCATCGCCAAGTCCCTCGTCGCCGGAGGAGTCGCCGGTGGAGTGTCACGAACTGCTGTTGCTCCATTGGAAAGATTAAAAATTTTGCTGCAGGTTCAAAATCCTCATAGTATTAAATACAATGGGACAATTCAAGGCTTGAAGTACATATGGAGAACTGAGGGTTTTAGAGGCTTGTTTAAAGGCAATGGAACTAATTGTGCTCGCATAGTCCCAAATTCAGCAGTCAAGTTCTTTAGCTACGACGAAGCATCAAAGGGTATTCTATGGTTCTACCGACAGCAAACTGGAAATGAAGATGCTCAACTCACACCTCTATTGCGCCTTGGAGCTGGTGCATGTGCTGGAATTATTGCCATGTCAGCAACTTACCCAATGGACATGGTACGAGGTCGTCTGACCGTCCAGACAGACATGTCTCCTCAGCAATATAGGGGAATATATCATGCTCTCACAACTGTCTTTAGGGAAGAAGGACCCCGGGCTCTGTACAGAGGCTGGCTGCCTTCTGTCATTGGAGTTGTACCTTATGTTGGTCTCAATTTTGCTGTTTATGAATCTCTGAAAGACTGGTTGATCAAAAGTAGACCTTTTGGACTAGTCCAGGACTCTGAGTTGAGTGTAACTACAAGGCTTGCATGTGGGGCTGCTGCTGGGACTGTTGGCCAGACAGTTGCTTACCCTCTTGATGTCATCCGGAGAAGAATGCAGATGGTAGGCTGGAAGGATGCTGCATCGGTTGTCGTTGGTGATGGGAAGAATAGGGCATCCCTTGAATATACTGGGATGGTTGATGCTTTCAGGAAAACGGTCCGCCATGAGGGGTTTGGAGCGCTGTACAAGGGTTTGGTCCCAAACTCTGTTAAGGTGGTGCCGTCCATAGCAATTGCTTTTGTCACATATGAGGTAGTGAAGGACGTTCTTGGAGTTGAGATGAGGATATCTGACTAA

Protein Analysis

357

Amino Acids

38.6

Weight (kDa)

9.5

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 41 - 126 2e-24 Mitochondrial carrier protein
Mito_carr PF00153 143 - 235 1.8e-27 Mitochondrial carrier protein
Mito_carr PF00153 245 - 348 3.4e-25 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 535
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 2 cut(s) 97, 991
AccI GTMKAC 2 cut(s) 44, 706
AccIII TCCGGA 1 cut(s) 816
AciI CCGC 2 cut(s) 38, 934
AcoI YGGCCR 2 cut(s) 60, 784
AcsI RAATTY 2 cut(s) 201, 337
AcyI GRCGYC 2 cut(s) 5, 98
AfaI GTAC 5 cut(s) 266, 507, 611, 645, 959
AfeI AGCGCT 1 cut(s) 954
AfiI CCNNNNNNNGG 3 cut(s) 64, 653, 940
AflIII ACRYGT 1 cut(s) 534
AgsI TTSAA 4 cut(s) 218, 254, 262, 896
AhlI ACTAGT 1 cut(s) 718
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 2 cut(s) 57, 723
AluBI AGCT 3 cut(s) 76, 360, 452
AluI AGCT 3 cut(s) 76, 360, 452
Alw21I GWGCWC 1 cut(s) 325
Alw26I GTCTC 2 cut(s) 543, 662
AlwNI CAGNNNCTG 1 cut(s) 618
Ama87I CYCGRG 1 cut(s) 600
Aor13HI TCCGGA 1 cut(s) 816
Aor51HI AGCGCT 1 cut(s) 954
AoxI GGCC 3 cut(s) 60, 69, 784
ApeKI GCWGC 5 cut(s) 208, 622, 767, 770, 851
ApoI RAATTY 2 cut(s) 201, 337
AspLEI GCGC 3 cut(s) 100, 444, 955
AspS9I GGNCC 4 cut(s) 24, 596, 931, 970
AsuC2I CCSGG 2 cut(s) 601, 602
AsuHPI GGTGA 1 cut(s) 881
AvaI CYCGRG 1 cut(s) 600
AvaII GGWCC 4 cut(s) 24, 596, 931, 970
BalI TGGCCA 1 cut(s) 786
BanI GGYRCC 2 cut(s) 97, 991
BanII GRGCYC 1 cut(s) 607
Bbv12I GWGCWC 1 cut(s) 325
BbvCI CCTCAGC 1 cut(s) 543
BbvI GCAGC 5 cut(s) 195, 609, 754, 757, 838
BccI CCATC 3 cut(s) 826, 866, 901
BceAI ACGGC 1 cut(s) 979
BciT130I CCWGG 2 cut(s) 59, 725
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 2 cut(s) 601, 602
BcoDI GTCTC 2 cut(s) 543, 662
BcuI ACTAGT 1 cut(s) 718
BfaI CTAG 1 cut(s) 719
BfmI CTRYAG 1 cut(s) 209
BfoI RGCGCY 2 cut(s) 101, 956
BfuAI ACCTGC 1 cut(s) 202
BglI GCCNNNNNGGC 1 cut(s) 68
BisI GCNGC 5 cut(s) 209, 623, 768, 771, 852
BlpI GCTNAGC 1 cut(s) 119
BlsI GCNGC 5 cut(s) 210, 624, 769, 772, 853
Bme1390I CCNGG 4 cut(s) 59, 601, 602, 725
Bme18I GGWCC 4 cut(s) 24, 596, 931, 970
BmeT110I CYCGRG 1 cut(s) 600
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 4 cut(s) 24, 596, 931, 970
BmiI GGNNCC 4 cut(s) 99, 598, 972, 993
BmrFI CCNGG 4 cut(s) 59, 601, 602, 725
BmrI ACTGGG 1 cut(s) 912
BmsI GCATC 7 cut(s) 132, 380, 409, 838, 863, 896, 904
BmuI ACTGGG 1 cut(s) 912
Bpu10I CCTNAGC 1 cut(s) 543
Bpu1102I GCTNAGC 1 cut(s) 119
BpuMI CCSGG 2 cut(s) 601, 602
BsaHI GRCGYC 2 cut(s) 5, 98
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 4 cut(s) 63, 445, 599, 600
BsaWI WCCGGW 1 cut(s) 816
Bsc4I CCNNNNNNNGG 3 cut(s) 64, 653, 940
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 4 cut(s) 27, 412, 695, 907
Bse3DI GCAATG 1 cut(s) 313
BseAI TCCGGA 1 cut(s) 816
BseBI CCWGG 2 cut(s) 59, 725
BseDI CCNNGG 4 cut(s) 63, 445, 599, 600
BseGI GGATG 4 cut(s) 813, 853, 887, 912
BseLI CCNNNNNNNGG 3 cut(s) 64, 653, 940
BseMI GCAATG 1 cut(s) 313
BseMII CTCAG 3 cut(s) 270, 557, 723
BseNI ACTGG 4 cut(s) 27, 412, 695, 907
BseRI GAGGAG 3 cut(s) 80, 162, 531
BseXI GCAGC 5 cut(s) 195, 609, 754, 757, 838
BseYI CCCAGC 1 cut(s) 773
BshFI GGCC 3 cut(s) 62, 71, 786
BshNI GGYRCC 2 cut(s) 97, 991
BsiHKAI GWGCWC 1 cut(s) 325
BsiHKCI CYCGRG 1 cut(s) 600
BsiSI CCGG 4 cut(s) 144, 156, 601, 817
BslFI GGGAC 5 cut(s) 118, 259, 317, 790, 956
BslI CCNNNNNNNGG 3 cut(s) 64, 653, 940
BsmAI GTCTC 2 cut(s) 543, 662
BsmFI GGGAC 5 cut(s) 118, 259, 317, 790, 956
BsmI GAATGC 1 cut(s) 831
BsnI GGCC 3 cut(s) 62, 71, 786
Bso31I GGTCTC 1 cut(s) 662
BsoBI CYCGRG 1 cut(s) 600
Bsp1286I GDGCHC 2 cut(s) 325, 607
Bsp13I TCCGGA 1 cut(s) 816
Bsp1407I TGTACA 2 cut(s) 609, 957
Bsp143I GATC 1 cut(s) 696
Bsp1720I GCTNAGC 1 cut(s) 119
BspACI CCGC 2 cut(s) 38, 934
BspANI GGCC 3 cut(s) 62, 71, 786
BspCNI CTCAG 3 cut(s) 271, 556, 724
BspEI TCCGGA 1 cut(s) 816
BspLI GGNNCC 4 cut(s) 99, 598, 972, 993
BspMAI CTGCAG 1 cut(s) 213
BspMI ACCTGC 1 cut(s) 202
BspT107I GGYRCC 2 cut(s) 97, 991
BspTNI GGTCTC 1 cut(s) 662
BsrDI GCAATG 1 cut(s) 313
BsrFI RCCGGY 1 cut(s) 155
BsrGI TGTACA 2 cut(s) 609, 957
BsrI ACTGG 4 cut(s) 27, 412, 695, 907
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 4 cut(s) 63, 445, 599, 600
BssMI GATC 1 cut(s) 696
BssNI GRCGYC 2 cut(s) 5, 98
BssT1I CCWWGG 1 cut(s) 445
Bst2UI CCWGG 2 cut(s) 59, 725
Bst4CI ACNGT 5 cut(s) 523, 580, 781, 793, 931
Bst6I CTCTTC 1 cut(s) 14
BstACI GRCGYC 2 cut(s) 5, 98
BstAUI TGTACA 2 cut(s) 609, 957
BstC8I GCNNGC 5 cut(s) 78, 82, 325, 620, 756
BstDEI CTNAG 4 cut(s) 119, 279, 543, 732
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 4 cut(s) 813, 853, 887, 912
BstH2I RGCGCY 2 cut(s) 101, 956
BstHHI GCGC 3 cut(s) 100, 444, 955
BstKTI GATC 1 cut(s) 699
BstMAI GTCTC 2 cut(s) 543, 662
BstMBI GATC 1 cut(s) 696
BstMWI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
BstNI CCWGG 2 cut(s) 59, 725
BstNSI RCATGY 3 cut(s) 462, 538, 762
BstSCI CCNGG 4 cut(s) 57, 599, 600, 723
BstSFI CTRYAG 1 cut(s) 209
BstV1I GCAGC 5 cut(s) 195, 609, 754, 757, 838
BsuRI GGCC 3 cut(s) 62, 71, 786
BtgZI GCGATG 1 cut(s) 109
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 4 cut(s) 813, 853, 887, 912
BtsIMutI CAGTG 1 cut(s) 34
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 5 cut(s) 78, 82, 325, 620, 756
CaiI CAGNNNCTG 1 cut(s) 618
CfoI GCGC 3 cut(s) 100, 444, 955
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 4 cut(s) 24, 596, 931, 970
Cfr9I CCCGGG 1 cut(s) 600
CpoI CGGWCCG 1 cut(s) 931
Csp6I GTAC 5 cut(s) 265, 506, 610, 644, 958
CspI CGGWCCG 1 cut(s) 931
CviAII CATG 8 cut(s) 110, 459, 478, 502, 535, 566, 759, 938
CviQI GTAC 5 cut(s) 265, 506, 610, 644, 958
DdeI CTNAG 4 cut(s) 119, 279, 543, 732
DinI GGCGCC 1 cut(s) 99
DpnI GATC 1 cut(s) 698
DpnII GATC 1 cut(s) 696
DraI TTTAAA 1 cut(s) 301
DrdI GACNNNNNNGTC 1 cut(s) 535
DseDI GACNNNNNNGTC 1 cut(s) 535
EaeI YGGCCR 2 cut(s) 60, 784
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 923
Eco130I CCWWGG 1 cut(s) 445
Eco24I GRGCYC 1 cut(s) 607
Eco31I GGTCTC 1 cut(s) 662
Eco32I GATATC 1 cut(s) 1062
Eco47I GGWCC 4 cut(s) 24, 596, 931, 970
Eco47III AGCGCT 1 cut(s) 954
Eco88I CYCGRG 1 cut(s) 600
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 1 cut(s) 596
EcoRII CCWGG 2 cut(s) 57, 723
EcoRV GATATC 1 cut(s) 1062
EcoT14I CCWWGG 1 cut(s) 445
EcoT38I GRGCYC 1 cut(s) 607
EgeI GGCGCC 1 cut(s) 99
EheI GGCGCC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 445
FaeI CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
FalI AAGNNNNNCTT 2 cut(s) 694, 726
FaqI GGGAC 5 cut(s) 118, 259, 317, 790, 956
FatI CATG 8 cut(s) 109, 458, 477, 501, 534, 565, 758, 937
FauNDI CATATG 2 cut(s) 269, 1021
FbaI TGATCA 1 cut(s) 696
FblI GTMKAC 2 cut(s) 44, 706
Fnu4HI GCNGC 5 cut(s) 209, 623, 768, 771, 852
FokI GGATG 4 cut(s) 800, 860, 874, 919
FriOI GRGCYC 1 cut(s) 607
Fsp4HI GCNGC 5 cut(s) 209, 623, 768, 771, 852
FspBI CTAG 1 cut(s) 719
GlaI GCGC 3 cut(s) 99, 443, 954
GluI GCNGC 5 cut(s) 209, 623, 768, 771, 852
GsaI CCCAGC 1 cut(s) 777
HaeII RGCGCY 2 cut(s) 101, 956
HaeIII GGCC 3 cut(s) 62, 71, 786
HapII CCGG 4 cut(s) 144, 156, 601, 817
HhaI GCGC 3 cut(s) 100, 444, 955
Hin1I GRCGYC 2 cut(s) 5, 98
Hin1II CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
Hin6I GCGC 3 cut(s) 98, 442, 953
HinP1I GCGC 3 cut(s) 98, 442, 953
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HinfI GANTC 4 cut(s) 32, 150, 677, 728
HpaII CCGG 4 cut(s) 144, 156, 601, 817
HphI GGTGA 1 cut(s) 881
Hpy166II GTNNAC 3 cut(s) 45, 55, 707
Hpy188I TCNGA 5 cut(s) 10, 519, 684, 733, 1066
Hpy188III TCNNGA 5 cut(s) 168, 526, 806, 817, 922
Hpy8I GTNNAC 3 cut(s) 45, 55, 707
Hpy99I CGWCG 4 cut(s) 10, 49, 143, 368
HpyAV CCTTC 6 cut(s) 80, 88, 587, 636, 838, 1027
HpyCH4III ACNGT 5 cut(s) 523, 580, 781, 793, 931
HpyCH4IV ACGT 2 cut(s) 15, 1038
HpyCH4V TGCA 5 cut(s) 211, 458, 758, 829, 854
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
HpyF3I CTNAG 4 cut(s) 119, 279, 543, 732
HpySE526I ACGT 2 cut(s) 15, 1038
Hsp92I GRCGYC 2 cut(s) 5, 98
Hsp92II CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
HspAI GCGC 3 cut(s) 98, 442, 953
KasI GGCGCC 1 cut(s) 97
Kpn2I TCCGGA 1 cut(s) 816
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 1 cut(s) 696
LmnI GCTCC 3 cut(s) 187, 449, 950
Lsp1109I GCAGC 5 cut(s) 195, 609, 754, 757, 838
LweI GCATC 7 cut(s) 132, 380, 409, 838, 863, 896, 904
MaeI CTAG 1 cut(s) 719
MaeII ACGT 2 cut(s) 15, 1038
MaeIII GTNAC 3 cut(s) 165, 742, 1015
MalI GATC 1 cut(s) 698
MboI GATC 1 cut(s) 696
MboII GAAGA 5 cut(s) 31, 428, 602, 834, 889
MfeI CAATTG 1 cut(s) 1005
MhlI GDGCHC 2 cut(s) 325, 607
MlsI TGGCCA 1 cut(s) 786
MluCI AATT 7 cut(s) 201, 249, 316, 337, 468, 661, 1005
MluNI TGGCCA 1 cut(s) 786
Mly113I GGCGCC 1 cut(s) 98
MlyI GAGTC 2 cut(s) 159, 722
Mox20I TGGCCA 1 cut(s) 786
MroI TCCGGA 1 cut(s) 816
MscI TGGCCA 1 cut(s) 786
MseI TTAA 4 cut(s) 197, 234, 300, 984
Msp20I TGGCCA 1 cut(s) 786
MspI CCGG 4 cut(s) 144, 156, 601, 817
MspR9I CCNGG 4 cut(s) 59, 601, 602, 725
MunI CAATTG 1 cut(s) 1005
Mva1269I GAATGC 1 cut(s) 831
MvaI CCWGG 2 cut(s) 59, 725
MwoI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
NarI GGCGCC 1 cut(s) 98
NciI CCSGG 2 cut(s) 601, 602
NdeI CATATG 2 cut(s) 269, 1021
NdeII GATC 1 cut(s) 696
NlaIII CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
NlaIV GGNNCC 4 cut(s) 99, 598, 972, 993
NmeAIII GCCGAG 1 cut(s) 88
NmuCI GTSAC 2 cut(s) 165, 1015
NspI RCATGY 3 cut(s) 462, 538, 762
PciI ACATGT 1 cut(s) 534
PctI GAATGC 1 cut(s) 831
PfeI GAWTC 2 cut(s) 32, 677
PfoI TCCNGGA 1 cut(s) 723
PkrI GCNGC 5 cut(s) 210, 624, 769, 772, 853
PleI GAGTC 2 cut(s) 158, 722
PluTI GGCGCC 1 cut(s) 101
PpsI GAGTC 2 cut(s) 158, 722
PpuMI RGGWCCY 1 cut(s) 596
PscI ACATGT 1 cut(s) 534
Psp5II RGGWCCY 1 cut(s) 596
Psp6I CCWGG 2 cut(s) 57, 723
PspFI CCCAGC 1 cut(s) 773
PspGI CCWGG 2 cut(s) 57, 723
PspN4I GGNNCC 4 cut(s) 99, 598, 972, 993
PspPI GGNCC 4 cut(s) 24, 596, 931, 970
PspPPI RGGWCCY 1 cut(s) 596
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 618
RsaI GTAC 5 cut(s) 266, 507, 611, 645, 959
RsaNI GTAC 5 cut(s) 265, 506, 610, 644, 958
Rsr2I CGGWCCG 1 cut(s) 931
RsrII CGGWCCG 1 cut(s) 931
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 4 cut(s) 197, 234, 300, 984
SatI GCNGC 5 cut(s) 209, 623, 768, 771, 852
Sau3AI GATC 1 cut(s) 696
Sau96I GGNCC 4 cut(s) 24, 596, 931, 970
SchI GAGTC 2 cut(s) 159, 722
ScrFI CCNGG 4 cut(s) 59, 601, 602, 725
SduI GDGCHC 2 cut(s) 325, 607
SfaNI GCATC 7 cut(s) 132, 380, 409, 838, 863, 896, 904
SfcI CTRYAG 1 cut(s) 209
SfiI GGCCNNNNNGGCC 1 cut(s) 68
SfoI GGCGCC 1 cut(s) 99
SgrAI CRCCGGYG 1 cut(s) 155
SinI GGWCC 4 cut(s) 24, 596, 931, 970
SmaI CCCGGG 1 cut(s) 602
SpeI ACTAGT 1 cut(s) 718
Sse9I AATT 7 cut(s) 201, 249, 316, 337, 468, 661, 1005
SsiI CCGC 2 cut(s) 38, 934
SspDI GGCGCC 1 cut(s) 97
SspMI CTAG 1 cut(s) 719
StyD4I CCNGG 4 cut(s) 57, 599, 600, 723
StyI CCWWGG 1 cut(s) 445
TaaI ACNGT 5 cut(s) 523, 580, 781, 793, 931
TaiI ACGT 2 cut(s) 18, 1041
TaqI TCGA 1 cut(s) 44
TasI AATT 7 cut(s) 201, 249, 316, 337, 468, 661, 1005
TatI WGTACW 3 cut(s) 264, 609, 957
TfiI GAWTC 2 cut(s) 32, 677
Tru1I TTAA 4 cut(s) 197, 234, 300, 984
Tru9I TTAA 4 cut(s) 197, 234, 300, 984
TscAI CASTG 1 cut(s) 34
TseFI GTSAC 2 cut(s) 165, 1015
TseI GCWGC 5 cut(s) 208, 622, 767, 770, 851
Tsp45I GTSAC 2 cut(s) 165, 1015
TspDTI ATGAA 2 cut(s) 429, 690
TspMI CCCGGG 1 cut(s) 600
TspRI CASTG 1 cut(s) 34
VpaK11BI GGWCC 4 cut(s) 24, 596, 931, 970
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 2 cut(s) 201, 337
XceI RCATGY 3 cut(s) 462, 538, 762
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmaI CCCGGG 1 cut(s) 600
XmiI GTMKAC 2 cut(s) 44, 706
XspI CTAG 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.