Rmu_sc0008757.1_g000008

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008757.1
Physical Location & Seq
Forward (+)
35223 .. 40040
4818 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008757.1_g000008.1.cds

Sequence Viewer

Length: 1503 bp
atggcttcggaggatgtgaaacggagcgaaacggcggtctcgacgatcgtgaatctggccgaggaggctaagctggcgagagagggcgtcgtcaaggctcccagcctcgccgttctcagcgtctgcaagtctctcgtcgccggcggagtcgccgggggagtgtctcgaacagctgttgcgccattggaacgaatgaaaatattgctccaggtccaaaatccccataacataaaatacagtggaacagtacaaggcctgaaatatatctggagaagtgagggtttccgtggactgtttaaaggaaatggtaccaattgtgctcggattgtccccaactcggctgtcaaattcttcagctacgagcaagcttctaatcatctctttcggcttcggtttgatctgtcggaaatggcttcggaggatgtgaaacggagcgaaacggcggtctcgacgatcgtgaatctggccgaggaggctaagctggcgagagagggcgtcgtcaaggctcccagcctcgccgttctcagcgtctgcaagtctctcgtcgccggcggagtcgccgggggagttactgaagcgtttcagtatccatgcaggtctcgaacagctgttgcgccattggaacgaatgaaaatattgctccaggtccaaaatccccataacataaaatacagtggaacagtacaaggcctgaaatatatctggagaagtgagggtttccgtggactgtttaaaggaaatggtaccaattgtgctcggattgtccccaactcggctgtcaaattcttcagctacgagcaagcttctaagggaatattgtggatgtatcgggagaaaactggcaacgaagatgctcagctcactcctcttctacgacttggagctggggcatgtgctggaattattgctatgtccgcaacttacccaatggacatggtacggggaaggattactgtacagacagagtcgtctccctatcagtatagaggaatgttccatgctctatcaactgtgcttcgggaggagggtccacgtgccttgtacaagggctggcttccttccgtaattggagttgttccgtatgttggactcaactttgctgtgtatgaatccctaaaggattggttaattaaaagtagaccatttggacttgtccaagatacagatttgagcgtgacaacacgattggcttgtggggccgctgctggaactgtcgggcagactgttgcttacccacttgatgtcatccgtcgaagaatgcagatggtgggttggagtcatgctgcttccgttgtcgctggtgaggggagaagcaaggcaccacttgaatatactggcatggttgatgcatttaggaaaactgttcgacacgagggctttggtgcattgtacaagggtttggttcccaattctgttaaggttgtcccatccattgcaattgcatttgtgacgtacgagatggtgaaggacattttaggagttgagatcaggatatctgactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

500

Amino Acids

54.31

Weight (kDa)

9.61

Isoelectric Point (pI)

37.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 967
Acc36I ACCTGC 1 cut(s) 585
Acc65I GGTACC 2 cut(s) 308, 743
AccB1I GGYRCC 3 cut(s) 308, 743, 1318
AccI GTMKAC 1 cut(s) 1138
AciI CCGC 6 cut(s) 35, 144, 443, 552, 915, 1200
AcoI YGGCCR 2 cut(s) 57, 465
AcsI RAATTY 2 cut(s) 347, 782
AcuI CTGAAG 3 cut(s) 337, 594, 772
AcvI CACGTG 1 cut(s) 1034
AcyI GRCGYC 2 cut(s) 87, 495
AfaI GTAC 9 cut(s) 249, 310, 684, 745, 939, 957, 1043, 1391, 1454
AfiI CCNNNNNNNGG 3 cut(s) 337, 772, 1085
AgsI TTSAA 1 cut(s) 1328
AjnI CCWGG 2 cut(s) 207, 642
Alw21I GWGCWC 2 cut(s) 322, 757
Alw26I GTCTC 7 cut(s) 43, 135, 168, 451, 543, 603, 975
AlwNI CAGNNNCTG 2 cut(s) 123, 531
AoxI GGCC 5 cut(s) 57, 253, 465, 688, 1197
ApeKI GCWGC 2 cut(s) 1202, 1283
ApoI RAATTY 2 cut(s) 347, 782
ArsI GACNNNNNNTTYG 4 cut(s) 21, 53, 429, 461
Asp700I GAANNNNTTC 1 cut(s) 579
Asp718I GGTACC 2 cut(s) 308, 743
AspLEI GCGC 2 cut(s) 181, 616
AspS9I GGNCC 4 cut(s) 211, 646, 1028, 1197
AsuC2I CCSGG 2 cut(s) 154, 562
AsuHPI GGTGA 2 cut(s) 1313, 1474
AvaII GGWCC 3 cut(s) 211, 646, 1028
BanI GGYRCC 3 cut(s) 308, 743, 1318
BauI CACGAG 1 cut(s) 1370
BbrPI CACGTG 1 cut(s) 1034
Bbv12I GWGCWC 2 cut(s) 322, 757
BbvI GCAGC 2 cut(s) 1189, 1270
BccI CCATC 3 cut(s) 1258, 1435, 1453
BceAI ACGGC 4 cut(s) 48, 95, 456, 503
BcgI CGANNNNNNTGC 4 cut(s) 115, 149, 523, 557
BciT130I CCWGG 2 cut(s) 209, 644
BciVI GTATCC 1 cut(s) 597
BcnI CCSGG 2 cut(s) 154, 562
BcoDI GTCTC 7 cut(s) 43, 135, 168, 451, 543, 603, 975
BfuAI ACCTGC 1 cut(s) 585
BfuI GTATCC 1 cut(s) 597
BglI GCCNNNNNGGC 2 cut(s) 65, 473
BisI GCNGC 3 cut(s) 1200, 1203, 1284
BlpI GCTNAGC 3 cut(s) 69, 477, 855
BlsI GCNGC 3 cut(s) 1201, 1204, 1285
Bme1390I CCNGG 4 cut(s) 154, 209, 562, 644
Bme18I GGWCC 3 cut(s) 211, 646, 1028
BmgT120I GGNCC 4 cut(s) 211, 646, 1028, 1197
BmiI GGNNCC 8 cut(s) 99, 310, 507, 745, 1029, 1198, 1320, 1404
BmrFI CCNGG 4 cut(s) 154, 209, 562, 644
BmsI GCATC 2 cut(s) 841, 1336
BpmI CTGGAG 4 cut(s) 191, 289, 626, 724
Bpu1102I GCTNAGC 3 cut(s) 69, 477, 855
BpuMI CCSGG 2 cut(s) 154, 562
BsaAI YACGTR 1 cut(s) 1034
BsaHI GRCGYC 2 cut(s) 87, 495
BsaI GGTCTC 3 cut(s) 43, 451, 603
BsaJI CCNNGG 6 cut(s) 60, 153, 286, 468, 561, 721
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 772, 1085
Bse118I RCCGGY 2 cut(s) 140, 548
Bse1I ACTGG 2 cut(s) 844, 1339
Bse3DI GCAATG 1 cut(s) 1431
BseBI CCWGG 2 cut(s) 209, 644
BseDI CCNNGG 6 cut(s) 60, 153, 286, 468, 561, 721
BseGI GGATG 5 cut(s) 19, 427, 828, 1245, 1427
BseLI CCNNNNNNNGG 3 cut(s) 337, 772, 1085
BseMI GCAATG 1 cut(s) 1431
BseMII CTCAG 3 cut(s) 130, 538, 869
BseNI ACTGG 2 cut(s) 844, 1339
BseRI GAGGAG 4 cut(s) 77, 485, 855, 1037
BseXI GCAGC 2 cut(s) 1189, 1270
BseYI CCCAGC 3 cut(s) 101, 509, 884
Bsh1285I CGRYCG 2 cut(s) 48, 456
BshFI GGCC 5 cut(s) 59, 255, 467, 690, 1199
BshNI GGYRCC 3 cut(s) 308, 743, 1318
BsiEI CGRYCG 2 cut(s) 48, 456
BsiHKAI GWGCWC 2 cut(s) 322, 757
BsiSI CCGG 4 cut(s) 141, 153, 549, 561
BsiWI CGTACG 1 cut(s) 1452
BslFI GGGAC 3 cut(s) 314, 749, 1409
BslI CCNNNNNNNGG 3 cut(s) 337, 772, 1085
BsmAI GTCTC 7 cut(s) 43, 135, 168, 451, 543, 603, 975
BsmBI CGTCTC 1 cut(s) 975
BsmFI GGGAC 3 cut(s) 314, 749, 1409
BsmI GAATGC 1 cut(s) 1263
BsnI GGCC 5 cut(s) 59, 255, 467, 690, 1199
Bso31I GGTCTC 3 cut(s) 43, 451, 603
Bsp1286I GDGCHC 2 cut(s) 322, 757
Bsp1407I TGTACA 3 cut(s) 955, 1041, 1389
Bsp143I GATC 4 cut(s) 45, 397, 453, 1485
Bsp1720I GCTNAGC 3 cut(s) 69, 477, 855
BspACI CCGC 6 cut(s) 35, 144, 443, 552, 915, 1200
BspANI GGCC 5 cut(s) 59, 255, 467, 690, 1199
BspCNI CTCAG 3 cut(s) 129, 537, 868
BspLI GGNNCC 8 cut(s) 99, 310, 507, 745, 1029, 1198, 1320, 1404
BspMI ACCTGC 1 cut(s) 585
BspT107I GGYRCC 3 cut(s) 308, 743, 1318
BspTNI GGTCTC 3 cut(s) 43, 451, 603
BsrDI GCAATG 1 cut(s) 1431
BsrFI RCCGGY 2 cut(s) 140, 548
BsrGI TGTACA 3 cut(s) 955, 1041, 1389
BsrI ACTGG 2 cut(s) 844, 1339
BssAI RCCGGY 2 cut(s) 140, 548
BssECI CCNNGG 6 cut(s) 60, 153, 286, 468, 561, 721
BssMI GATC 4 cut(s) 45, 397, 453, 1485
BssNI GRCGYC 2 cut(s) 87, 495
BssSI CACGAG 1 cut(s) 1370
Bst2BI CACGAG 1 cut(s) 1370
Bst2UI CCWGG 2 cut(s) 209, 644
Bst6I CTCTTC 1 cut(s) 873
BstACI GRCGYC 2 cut(s) 87, 495
BstAUI TGTACA 3 cut(s) 955, 1041, 1389
BstBAI YACGTR 1 cut(s) 1034
BstC8I GCNNGC 7 cut(s) 75, 142, 366, 483, 550, 801, 1052
BstDEI CTNAG 6 cut(s) 69, 116, 477, 524, 807, 855
BstDSI CCRYGG 2 cut(s) 286, 721
BstF5I GGATG 5 cut(s) 19, 427, 828, 1245, 1427
BstHHI GCGC 2 cut(s) 181, 616
BstKTI GATC 4 cut(s) 48, 400, 456, 1488
BstMAI GTCTC 7 cut(s) 43, 135, 168, 451, 543, 603, 975
BstMBI GATC 4 cut(s) 45, 397, 453, 1485
BstMCI CGRYCG 2 cut(s) 48, 456
BstMWI GCNNNNNNNGC 6 cut(s) 65, 74, 473, 482, 914, 1196
BstNI CCWGG 2 cut(s) 209, 644
BstNSI RCATGY 1 cut(s) 894
BstSCI CCNGG 4 cut(s) 152, 207, 560, 642
BstV1I GCAGC 2 cut(s) 1189, 1270
BsuI GTATCC 1 cut(s) 597
BsuRI GGCC 5 cut(s) 59, 255, 467, 690, 1199
BtgI CCRYGG 2 cut(s) 286, 721
BtsCI GGATG 5 cut(s) 19, 427, 828, 1245, 1427
BtsIMutI CAGTG 2 cut(s) 244, 679
BveI ACCTGC 1 cut(s) 585
Cac8I GCNNGC 7 cut(s) 75, 142, 366, 483, 550, 801, 1052
CaiI CAGNNNCTG 2 cut(s) 123, 531
CfoI GCGC 2 cut(s) 181, 616
Cfr10I RCCGGY 2 cut(s) 140, 548
Cfr13I GGNCC 4 cut(s) 211, 646, 1028, 1197
CseI GACGC 4 cut(s) 76, 109, 484, 517
Csp6I GTAC 9 cut(s) 248, 309, 683, 744, 938, 956, 1042, 1390, 1453
CspCI CAANNNNNGTGG 2 cut(s) 1020, 1055
CviAII CATG 6 cut(s) 591, 891, 934, 998, 1280, 1339
CviQI GTAC 9 cut(s) 248, 309, 683, 744, 938, 956, 1042, 1390, 1453
DdeI CTNAG 6 cut(s) 69, 116, 477, 524, 807, 855
DpnI GATC 4 cut(s) 47, 399, 455, 1487
DpnII GATC 4 cut(s) 45, 397, 453, 1485
DraI TTTAAA 2 cut(s) 298, 733
DrdI GACNNNNNNGTC 1 cut(s) 967
DseDI GACNNNNNNGTC 1 cut(s) 967
EaeI YGGCCR 2 cut(s) 57, 465
Eam1104I CTCTTC 1 cut(s) 873
EarI CTCTTC 1 cut(s) 873
EciI GGCGGA 2 cut(s) 159, 567
Eco147I AGGCCT 2 cut(s) 255, 690
Eco31I GGTCTC 3 cut(s) 43, 451, 603
Eco32I GATATC 1 cut(s) 1494
Eco47I GGWCC 3 cut(s) 211, 646, 1028
Eco57I CTGAAG 3 cut(s) 337, 594, 772
Eco72I CACGTG 1 cut(s) 1034
EcoRII CCWGG 2 cut(s) 207, 642
EcoRV GATATC 1 cut(s) 1494
EcoT22I ATGCAT 1 cut(s) 1351
Esp3I CGTCTC 1 cut(s) 975
FaeI CATG 6 cut(s) 594, 894, 937, 1001, 1283, 1342
FaqI GGGAC 3 cut(s) 314, 749, 1409
FatI CATG 6 cut(s) 590, 890, 933, 997, 1279, 1338
FblI GTMKAC 1 cut(s) 1138
Fnu4HI GCNGC 3 cut(s) 1200, 1203, 1284
FokI GGATG 5 cut(s) 26, 434, 835, 1232, 1414
Fsp4HI GCNGC 3 cut(s) 1200, 1203, 1284
GlaI GCGC 2 cut(s) 180, 615
GluI GCNGC 3 cut(s) 1200, 1203, 1284
GsaI CCCAGC 3 cut(s) 105, 513, 888
GsuI CTGGAG 4 cut(s) 191, 289, 626, 724
HaeIII GGCC 5 cut(s) 59, 255, 467, 690, 1199
HapII CCGG 4 cut(s) 141, 153, 549, 561
HgaI GACGC 4 cut(s) 76, 109, 484, 517
HhaI GCGC 2 cut(s) 181, 616
Hin1I GRCGYC 2 cut(s) 87, 495
Hin1II CATG 6 cut(s) 594, 894, 937, 1001, 1283, 1342
Hin6I GCGC 2 cut(s) 179, 614
HinP1I GCGC 2 cut(s) 179, 614
HindIII AAGCTT 2 cut(s) 366, 801
HinfI GANTC 8 cut(s) 52, 147, 460, 555, 965, 1089, 1109, 1276
HpaII CCGG 4 cut(s) 141, 153, 549, 561
HphI GGTGA 2 cut(s) 1313, 1474
Hpy166II GTNNAC 4 cut(s) 290, 725, 1031, 1139
Hpy188I TCNGA 6 cut(s) 10, 324, 406, 418, 759, 1498
Hpy8I GTNNAC 4 cut(s) 290, 725, 1031, 1139
Hpy99I CGWCG 7 cut(s) 46, 92, 140, 454, 500, 548, 1254
HpyAV CCTTC 3 cut(s) 939, 1068, 1459
HpyCH4IV ACGT 2 cut(s) 1033, 1451
HpyCH4V TGCA 8 cut(s) 126, 534, 594, 1261, 1349, 1385, 1436, 1442
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 74, 473, 482, 914, 1196
HpyF3I CTNAG 6 cut(s) 69, 116, 477, 524, 807, 855
HpySE526I ACGT 2 cut(s) 1033, 1451
Hsp92I GRCGYC 2 cut(s) 87, 495
Hsp92II CATG 6 cut(s) 594, 894, 937, 1001, 1283, 1342
HspAI GCGC 2 cut(s) 179, 614
KpnI GGTACC 2 cut(s) 312, 747
KroI GCCGGC 2 cut(s) 140, 548
KroNI GCCGGC 2 cut(s) 142, 550
Kzo9I GATC 4 cut(s) 45, 397, 453, 1485
LmnI GCTCC 7 cut(s) 24, 103, 210, 432, 511, 645, 881
Lsp1109I GCAGC 2 cut(s) 1189, 1270
LweI GCATC 2 cut(s) 841, 1336
MaeII ACGT 2 cut(s) 1033, 1451
MaeIII GTNAC 3 cut(s) 568, 1174, 1447
MalI GATC 4 cut(s) 47, 399, 455, 1487
MboI GATC 4 cut(s) 45, 397, 453, 1485
MboII GAAGA 5 cut(s) 343, 778, 860, 860, 1266
MfeI CAATTG 3 cut(s) 313, 748, 1437
MhlI GDGCHC 2 cut(s) 322, 757
MluCI AATT 9 cut(s) 313, 347, 748, 782, 900, 1065, 1128, 1408, 1437
MlyI GAGTC 5 cut(s) 156, 564, 974, 1083, 1285
MmeI TCCRAC 3 cut(s) 384, 1066, 1253
Mph1103I ATGCAT 1 cut(s) 1351
MreI CGCCGGCG 2 cut(s) 140, 548
MroNI GCCGGC 2 cut(s) 140, 548
MroXI GAANNNNTTC 1 cut(s) 579
MseI TTAA 5 cut(s) 297, 732, 1127, 1131, 1416
MspA1I CMGCKG 3 cut(s) 173, 608, 1202
MspI CCGG 4 cut(s) 141, 153, 549, 561
MspR9I CCNGG 4 cut(s) 154, 209, 562, 644
MunI CAATTG 3 cut(s) 313, 748, 1437
Mva1269I GAATGC 1 cut(s) 1263
MvaI CCWGG 2 cut(s) 209, 644
MwoI GCNNNNNNNGC 6 cut(s) 65, 74, 473, 482, 914, 1196
NaeI GCCGGC 2 cut(s) 142, 550
NciI CCSGG 2 cut(s) 154, 562
NdeII GATC 4 cut(s) 45, 397, 453, 1485
NgoMIV GCCGGC 2 cut(s) 140, 548
NlaIII CATG 6 cut(s) 594, 894, 937, 1001, 1283, 1342
NlaIV GGNNCC 8 cut(s) 99, 310, 507, 745, 1029, 1198, 1320, 1404
NmeAIII GCCGAG 4 cut(s) 85, 317, 493, 752
NmuCI GTSAC 2 cut(s) 1174, 1447
NsiI ATGCAT 1 cut(s) 1351
NspI RCATGY 1 cut(s) 894
PacI TTAATTAA 1 cut(s) 1131
PceI AGGCCT 2 cut(s) 255, 690
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 446
PctI GAATGC 1 cut(s) 1263
PdiI GCCGGC 2 cut(s) 142, 550
PdmI GAANNNNTTC 1 cut(s) 579
PfeI GAWTC 3 cut(s) 52, 460, 1109
Pfl23II CGTACG 1 cut(s) 1452
PflFI GACNNNGTC 1 cut(s) 964
PkrI GCNGC 3 cut(s) 1201, 1204, 1285
Ple19I CGATCG 2 cut(s) 48, 456
PleI GAGTC 5 cut(s) 155, 563, 973, 1083, 1284
PmaCI CACGTG 1 cut(s) 1034
PmlI CACGTG 1 cut(s) 1034
PpsI GAGTC 5 cut(s) 155, 563, 973, 1083, 1284
Ppu21I YACGTR 1 cut(s) 1034
Psp6I CCWGG 2 cut(s) 207, 642
PspCI CACGTG 1 cut(s) 1034
PspFI CCCAGC 3 cut(s) 101, 509, 884
PspGI CCWGG 2 cut(s) 207, 642
PspLI CGTACG 1 cut(s) 1452
PspN4I GGNNCC 8 cut(s) 99, 310, 507, 745, 1029, 1198, 1320, 1404
PspPI GGNCC 4 cut(s) 211, 646, 1028, 1197
PstNI CAGNNNCTG 2 cut(s) 123, 531
PsyI GACNNNGTC 1 cut(s) 964
PvuI CGATCG 2 cut(s) 48, 456
PvuII CAGCTG 2 cut(s) 173, 608
RsaI GTAC 9 cut(s) 249, 310, 684, 745, 939, 957, 1043, 1391, 1454
RsaNI GTAC 9 cut(s) 248, 309, 683, 744, 938, 956, 1042, 1390, 1453
SaqAI TTAA 5 cut(s) 297, 732, 1127, 1131, 1416
SatI GCNGC 3 cut(s) 1200, 1203, 1284
Sau3AI GATC 4 cut(s) 45, 397, 453, 1485
Sau96I GGNCC 4 cut(s) 211, 646, 1028, 1197
SchI GAGTC 5 cut(s) 156, 564, 974, 1083, 1285
ScrFI CCNGG 4 cut(s) 154, 209, 562, 644
SduI GDGCHC 2 cut(s) 322, 757
SfaNI GCATC 2 cut(s) 841, 1336
SgrAI CRCCGGYG 2 cut(s) 140, 548
SinI GGWCC 3 cut(s) 211, 646, 1028
Sse9I AATT 9 cut(s) 313, 347, 748, 782, 900, 1065, 1128, 1408, 1437
SseBI AGGCCT 2 cut(s) 255, 690
SsiI CCGC 6 cut(s) 35, 144, 443, 552, 915, 1200
SspI AATATT 3 cut(s) 201, 636, 816
StuI AGGCCT 2 cut(s) 255, 690
StyD4I CCNGG 4 cut(s) 152, 207, 560, 642
TaiI ACGT 2 cut(s) 1036, 1454
TaqI TCGA 6 cut(s) 41, 166, 449, 601, 1252, 1366
TasI AATT 9 cut(s) 313, 347, 748, 782, 900, 1065, 1128, 1408, 1437
TatI WGTACW 5 cut(s) 247, 682, 955, 1041, 1389
TauI GCSGC 1 cut(s) 1202
TfiI GAWTC 3 cut(s) 52, 460, 1109
Tru1I TTAA 5 cut(s) 297, 732, 1127, 1131, 1416
Tru9I TTAA 5 cut(s) 297, 732, 1127, 1131, 1416
TscAI CASTG 2 cut(s) 244, 679
TseFI GTSAC 2 cut(s) 1174, 1447
TseI GCWGC 2 cut(s) 1202, 1283
Tsp45I GTSAC 2 cut(s) 1174, 1447
TspDTI ATGAA 3 cut(s) 209, 644, 1122
TspGWI ACGGA 8 cut(s) 37, 275, 445, 710, 1051, 1068, 1238, 1279
TspRI CASTG 2 cut(s) 244, 679
Tth111I GACNNNGTC 1 cut(s) 964
VpaK11BI GGWCC 3 cut(s) 211, 646, 1028
XapI RAATTY 2 cut(s) 347, 782
XceI RCATGY 1 cut(s) 894
XmiI GTMKAC 1 cut(s) 1138
XmnI GAANNNNTTC 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.