pycom06g09720

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
15024153 .. 15027169
3017 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g09720.4

Sequence Viewer

Length: 1071 bp
ATGGCGTCGGAGGATGTGAAGAGGACGAGTAATTCCGCGGTGTCGACGATTGTGAACCTGGCCGAGGAGGCGAAGCTCGCAAGCGAAGGAGTGAAGGCGCCGACCGGCCATGTCTTGCTTAGCATCGCCAAGTCCCTCGTTGCCGGAGGAGTTGCCGGTGGAGTGTCACGAACTGCTGTTGCTCCATTGGAAAGATTAAAAATTTTGCTGCAGGTTCAAAACCCTCATAGTATTAAATACAAAGGGACGATTCAGGGCTTGAAGTACATATGGAGGACTGAGGGTTTCAGAGGCTTGTTTAAAGGCAATGGAACTAATTGTGCTCGCATAGTCCCTAATTCAGCAGTCAAGTTCTTTAGCTACGAGGAAGCATCAAAGGGTATTTTATGGTTCTACCGACAGCAAACTGGAAATGAAGATGCTCAACTCACACCTGTATTACGCCTTGGAGCTGGTGCATGTGCTGGAATTATTGCCATGTCAGCAACTTACCCAATGGACATGGTACGAGGTCGTTTAACTGTCCAGACAGACATGTCTCCTCGGCAATATAGGGGAATATATCATGCTCTCACAACCGTCTTTAGGGAAGAAGGACCCCGGGCTCTGTACAGAGGTTGGCTGCCTTCTGTCATAGGAGTTGTACCGTATGTTGGTCTCAATTTTGCTGTTTATGAATCTCTGAAAGATTGGTTGATCGAAAGTAGACCTTTTGGACTAGTCCAGGACTCTGAGTTGAGTGTACTTACGAGGCTTGCATGTGGGGCTGCTGCTGGGACTGTGGGCCAGACGGTTGCTTACCCTCTCGATGTCATCCGGAGAAGAATGCAGATGGTAGGCTGGAAGGATGCTGCTTCGGTTGTCGTTGGTGATGGAAAGAGCAGGGCATCCCTAGAATATACTGGTATGGTTGATGCATTCAGGAAAACAGTCCATCATGAGGGGTTTGGAGCACTGTACAAGGGTTTGGTCCCAAACTCTGTTAAGGTGGTACCTTCCATAGCAATTGCTTTTGTCACGTATGAGGTAGTGAAGGACGTTCTTGGAGTTGAGATGAGGATATCTGACTAA

Protein Analysis

357

Amino Acids

38.61

Weight (kDa)

9.5

Isoelectric Point (pI)

31.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 535
Acc36I ACCTGC 1 cut(s) 202
Acc65I GGTACC 1 cut(s) 991
AccB1I GGYRCC 2 cut(s) 97, 991
AccI GTMKAC 2 cut(s) 44, 706
AccII CGCG 1 cut(s) 38
AccIII TCCGGA 1 cut(s) 816
AciI CCGC 2 cut(s) 36, 38
AcoI YGGCCR 2 cut(s) 60, 106
AcsI RAATTY 1 cut(s) 201
AcyI GRCGYC 2 cut(s) 5, 98
AfaI GTAC 7 cut(s) 266, 507, 611, 645, 744, 959, 993
AfiI CCNNNNNNNGG 4 cut(s) 64, 585, 653, 940
AflIII ACRYGT 1 cut(s) 534
AgsI TTSAA 2 cut(s) 218, 262
AhlI ACTAGT 1 cut(s) 718
AjnI CCWGG 2 cut(s) 57, 723
AluBI AGCT 3 cut(s) 76, 360, 452
AluI AGCT 3 cut(s) 76, 360, 452
Alw21I GWGCWC 2 cut(s) 325, 955
Alw26I GTCTC 2 cut(s) 543, 662
Ama87I CYCGRG 1 cut(s) 600
Aor13HI TCCGGA 1 cut(s) 816
AoxI GGCC 3 cut(s) 60, 106, 784
ApeKI GCWGC 5 cut(s) 208, 622, 767, 770, 851
ApoI RAATTY 1 cut(s) 201
Asp718I GGTACC 1 cut(s) 991
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 3 cut(s) 596, 784, 970
AsuC2I CCSGG 2 cut(s) 601, 602
AsuHPI GGTGA 1 cut(s) 881
AvaI CYCGRG 1 cut(s) 600
AvaII GGWCC 2 cut(s) 596, 970
BanI GGYRCC 2 cut(s) 97, 991
BanII GRGCYC 1 cut(s) 607
Bbv12I GWGCWC 2 cut(s) 325, 955
BbvI GCAGC 5 cut(s) 195, 609, 754, 757, 838
BccI CCATC 3 cut(s) 826, 866, 942
BciT130I CCWGG 2 cut(s) 59, 725
BcnI CCSGG 2 cut(s) 601, 602
BcoDI GTCTC 2 cut(s) 543, 662
BcuI ACTAGT 1 cut(s) 718
BfaI CTAG 2 cut(s) 719, 893
BfmI CTRYAG 1 cut(s) 209
BfoI RGCGCY 1 cut(s) 101
BfuAI ACCTGC 1 cut(s) 202
BglI GCCNNNNNGGC 1 cut(s) 68
BisI GCNGC 5 cut(s) 209, 623, 768, 771, 852
BlpI GCTNAGC 1 cut(s) 119
BlsI GCNGC 5 cut(s) 210, 624, 769, 772, 853
Bme1390I CCNGG 4 cut(s) 59, 601, 602, 725
Bme18I GGWCC 2 cut(s) 596, 970
BmeT110I CYCGRG 1 cut(s) 600
BmgT120I GGNCC 3 cut(s) 596, 784, 970
BmiI GGNNCC 4 cut(s) 99, 598, 972, 993
BmrFI CCNGG 4 cut(s) 59, 601, 602, 725
BmsI GCATC 6 cut(s) 132, 380, 409, 838, 896, 904
Bpu1102I GCTNAGC 1 cut(s) 119
BpuMI CCSGG 2 cut(s) 601, 602
BsaAI YACGTR 1 cut(s) 1020
BsaHI GRCGYC 2 cut(s) 5, 98
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 6 cut(s) 36, 63, 445, 542, 599, 600
BsaWI WCCGGW 1 cut(s) 816
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 585, 653, 940
Bse118I RCCGGY 2 cut(s) 104, 155
Bse1I ACTGG 2 cut(s) 412, 907
Bse3DI GCAATG 1 cut(s) 313
BseAI TCCGGA 1 cut(s) 816
BseBI CCWGG 2 cut(s) 59, 725
BseDI CCNNGG 6 cut(s) 36, 63, 445, 542, 599, 600
BseGI GGATG 4 cut(s) 19, 813, 853, 887
BseLI CCNNNNNNNGG 4 cut(s) 64, 585, 653, 940
BseMI GCAATG 1 cut(s) 313
BseMII CTCAG 2 cut(s) 270, 723
BseNI ACTGG 2 cut(s) 412, 907
BseRI GAGGAG 3 cut(s) 80, 162, 531
BseXI GCAGC 5 cut(s) 195, 609, 754, 757, 838
BseYI CCCAGC 1 cut(s) 773
Bsh1236I CGCG 1 cut(s) 38
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 3 cut(s) 62, 108, 786
BshNI GGYRCC 2 cut(s) 97, 991
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 325, 955
BsiHKCI CYCGRG 1 cut(s) 600
BsiSI CCGG 5 cut(s) 105, 144, 156, 601, 817
BslFI GGGAC 5 cut(s) 118, 259, 317, 790, 956
BslI CCNNNNNNNGG 4 cut(s) 64, 585, 653, 940
BsmAI GTCTC 2 cut(s) 543, 662
BsmFI GGGAC 5 cut(s) 118, 259, 317, 790, 956
BsmI GAATGC 2 cut(s) 831, 917
BsnI GGCC 3 cut(s) 62, 108, 786
Bso31I GGTCTC 1 cut(s) 662
BsoBI CYCGRG 1 cut(s) 600
Bsp1286I GDGCHC 3 cut(s) 325, 607, 955
Bsp13I TCCGGA 1 cut(s) 816
Bsp1407I TGTACA 2 cut(s) 609, 957
Bsp143I GATC 1 cut(s) 696
Bsp1720I GCTNAGC 1 cut(s) 119
BspACI CCGC 2 cut(s) 36, 38
BspANI GGCC 3 cut(s) 62, 108, 786
BspCNI CTCAG 2 cut(s) 271, 724
BspEI TCCGGA 1 cut(s) 816
BspFNI CGCG 1 cut(s) 38
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 4 cut(s) 99, 598, 972, 993
BspMAI CTGCAG 1 cut(s) 213
BspMI ACCTGC 1 cut(s) 202
BspT107I GGYRCC 2 cut(s) 97, 991
BspTNI GGTCTC 1 cut(s) 662
BsrDI GCAATG 1 cut(s) 313
BsrFI RCCGGY 2 cut(s) 104, 155
BsrGI TGTACA 2 cut(s) 609, 957
BsrI ACTGG 2 cut(s) 412, 907
BssAI RCCGGY 2 cut(s) 104, 155
BssECI CCNNGG 6 cut(s) 36, 63, 445, 542, 599, 600
BssMI GATC 1 cut(s) 696
BssNI GRCGYC 2 cut(s) 5, 98
BssT1I CCWWGG 1 cut(s) 445
Bst2UI CCWGG 2 cut(s) 59, 725
Bst4CI ACNGT 7 cut(s) 523, 580, 648, 781, 793, 931, 957
Bst6I CTCTTC 1 cut(s) 14
BstACI GRCGYC 2 cut(s) 5, 98
BstAUI TGTACA 2 cut(s) 609, 957
BstBAI YACGTR 1 cut(s) 1020
BstC8I GCNNGC 4 cut(s) 78, 82, 325, 756
BstDEI CTNAG 3 cut(s) 119, 279, 732
BstDSI CCRYGG 1 cut(s) 36
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 4 cut(s) 19, 813, 853, 887
BstFNI CGCG 1 cut(s) 38
BstH2I RGCGCY 1 cut(s) 101
BstHHI GCGC 1 cut(s) 100
BstKTI GATC 1 cut(s) 699
BstMAI GTCTC 2 cut(s) 543, 662
BstMBI GATC 1 cut(s) 696
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
BstNI CCWGG 2 cut(s) 59, 725
BstNSI RCATGY 3 cut(s) 462, 538, 762
BstSCI CCNGG 4 cut(s) 57, 599, 600, 723
BstSFI CTRYAG 1 cut(s) 209
BstUI CGCG 1 cut(s) 38
BstV1I GCAGC 5 cut(s) 195, 609, 754, 757, 838
BsuRI GGCC 3 cut(s) 62, 108, 786
BtgI CCRYGG 1 cut(s) 36
BtgZI GCGATG 1 cut(s) 109
BtsCI GGATG 4 cut(s) 19, 813, 853, 887
BtsIMutI CAGTG 1 cut(s) 953
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 4 cut(s) 78, 82, 325, 756
CciI TCATGA 1 cut(s) 937
CfoI GCGC 1 cut(s) 100
Cfr10I RCCGGY 2 cut(s) 104, 155
Cfr13I GGNCC 3 cut(s) 596, 784, 970
Cfr42I CCGCGG 1 cut(s) 39
Cfr9I CCCGGG 1 cut(s) 600
Csp6I GTAC 7 cut(s) 265, 506, 610, 644, 743, 958, 992
CviAII CATG 8 cut(s) 110, 459, 478, 502, 535, 566, 759, 938
CviQI GTAC 7 cut(s) 265, 506, 610, 644, 743, 958, 992
DdeI CTNAG 3 cut(s) 119, 279, 732
DinI GGCGCC 1 cut(s) 99
DpnI GATC 1 cut(s) 698
DpnII GATC 1 cut(s) 696
DraI TTTAAA 1 cut(s) 301
DrdI GACNNNNNNGTC 1 cut(s) 535
DseDI GACNNNNNNGTC 1 cut(s) 535
EaeI YGGCCR 2 cut(s) 60, 106
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 445
Eco24I GRGCYC 1 cut(s) 607
Eco31I GGTCTC 1 cut(s) 662
Eco32I GATATC 1 cut(s) 1062
Eco47I GGWCC 2 cut(s) 596, 970
Eco88I CYCGRG 1 cut(s) 600
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 1 cut(s) 596
EcoRII CCWGG 2 cut(s) 57, 723
EcoRV GATATC 1 cut(s) 1062
EcoT14I CCWWGG 1 cut(s) 445
EcoT22I ATGCAT 1 cut(s) 919
EcoT38I GRGCYC 1 cut(s) 607
EgeI GGCGCC 1 cut(s) 99
EheI GGCGCC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 445
FaeI CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
FalI AAGNNNNNCTT 2 cut(s) 694, 726
FaqI GGGAC 5 cut(s) 118, 259, 317, 790, 956
FatI CATG 8 cut(s) 109, 458, 477, 501, 534, 565, 758, 937
FauNDI CATATG 1 cut(s) 269
FblI GTMKAC 2 cut(s) 44, 706
Fnu4HI GCNGC 5 cut(s) 209, 623, 768, 771, 852
FokI GGATG 4 cut(s) 26, 800, 860, 874
FriOI GRGCYC 1 cut(s) 607
Fsp4HI GCNGC 5 cut(s) 209, 623, 768, 771, 852
FspBI CTAG 2 cut(s) 719, 893
GlaI GCGC 1 cut(s) 99
GluI GCNGC 5 cut(s) 209, 623, 768, 771, 852
GsaI CCCAGC 1 cut(s) 777
HaeII RGCGCY 1 cut(s) 101
HaeIII GGCC 3 cut(s) 62, 108, 786
HapII CCGG 5 cut(s) 105, 144, 156, 601, 817
HhaI GCGC 1 cut(s) 100
Hin1I GRCGYC 2 cut(s) 5, 98
Hin1II CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HinfI GANTC 3 cut(s) 250, 677, 728
HpaII CCGG 5 cut(s) 105, 144, 156, 601, 817
HphI GGTGA 1 cut(s) 881
Hpy166II GTNNAC 4 cut(s) 45, 55, 707, 743
Hpy188I TCNGA 5 cut(s) 10, 290, 684, 733, 1066
Hpy188III TCNNGA 6 cut(s) 168, 526, 806, 817, 922, 938
Hpy8I GTNNAC 4 cut(s) 45, 55, 707, 743
Hpy99I CGWCG 2 cut(s) 10, 49
HpyAV CCTTC 7 cut(s) 80, 88, 587, 636, 838, 1005, 1027
HpyCH4III ACNGT 7 cut(s) 523, 580, 648, 781, 793, 931, 957
HpyCH4IV ACGT 2 cut(s) 1019, 1038
HpyCH4V TGCA 5 cut(s) 211, 458, 758, 829, 917
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
HpyF3I CTNAG 3 cut(s) 119, 279, 732
HpySE526I ACGT 2 cut(s) 1019, 1038
Hsp92I GRCGYC 2 cut(s) 5, 98
Hsp92II CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
HspAI GCGC 1 cut(s) 98
KasI GGCGCC 1 cut(s) 97
Kpn2I TCCGGA 1 cut(s) 816
KpnI GGTACC 1 cut(s) 995
KspI CCGCGG 1 cut(s) 39
Kzo9I GATC 1 cut(s) 696
LmnI GCTCC 3 cut(s) 187, 449, 950
Lsp1109I GCAGC 5 cut(s) 195, 609, 754, 757, 838
LweI GCATC 6 cut(s) 132, 380, 409, 838, 896, 904
MaeI CTAG 2 cut(s) 719, 893
MaeII ACGT 2 cut(s) 1019, 1038
MaeIII GTNAC 2 cut(s) 165, 1015
MalI GATC 1 cut(s) 698
MboI GATC 1 cut(s) 696
MboII GAAGA 4 cut(s) 31, 428, 602, 834
MfeI CAATTG 1 cut(s) 1005
MhlI GDGCHC 3 cut(s) 325, 607, 955
MluCI AATT 7 cut(s) 31, 201, 316, 337, 468, 661, 1005
Mly113I GGCGCC 1 cut(s) 98
MlyI GAGTC 1 cut(s) 722
Mph1103I ATGCAT 1 cut(s) 919
MroI TCCGGA 1 cut(s) 816
MseI TTAA 5 cut(s) 197, 234, 300, 518, 984
MspA1I CMGCKG 1 cut(s) 38
MspI CCGG 5 cut(s) 105, 144, 156, 601, 817
MspR9I CCNGG 4 cut(s) 59, 601, 602, 725
MunI CAATTG 1 cut(s) 1005
Mva1269I GAATGC 2 cut(s) 831, 917
MvaI CCWGG 2 cut(s) 59, 725
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 4 cut(s) 68, 77, 482, 764
NarI GGCGCC 1 cut(s) 98
NciI CCSGG 2 cut(s) 601, 602
NdeI CATATG 1 cut(s) 269
NdeII GATC 1 cut(s) 696
NlaIII CATG 8 cut(s) 113, 462, 481, 505, 538, 569, 762, 941
NlaIV GGNNCC 4 cut(s) 99, 598, 972, 993
NmeAIII GCCGAG 2 cut(s) 88, 523
NmuCI GTSAC 2 cut(s) 165, 1015
NsiI ATGCAT 1 cut(s) 919
NspI RCATGY 3 cut(s) 462, 538, 762
PagI TCATGA 1 cut(s) 937
PciI ACATGT 1 cut(s) 534
PctI GAATGC 2 cut(s) 831, 917
PfeI GAWTC 2 cut(s) 250, 677
PfoI TCCNGGA 1 cut(s) 723
PkrI GCNGC 5 cut(s) 210, 624, 769, 772, 853
PleI GAGTC 1 cut(s) 722
PluTI GGCGCC 1 cut(s) 101
PpsI GAGTC 1 cut(s) 722
Ppu21I YACGTR 1 cut(s) 1020
PpuMI RGGWCCY 1 cut(s) 596
PscI ACATGT 1 cut(s) 534
Psp5II RGGWCCY 1 cut(s) 596
Psp6I CCWGG 2 cut(s) 57, 723
PspFI CCCAGC 1 cut(s) 773
PspGI CCWGG 2 cut(s) 57, 723
PspN4I GGNNCC 4 cut(s) 99, 598, 972, 993
PspPI GGNCC 3 cut(s) 596, 784, 970
PspPPI RGGWCCY 1 cut(s) 596
PstI CTGCAG 1 cut(s) 213
RsaI GTAC 7 cut(s) 266, 507, 611, 645, 744, 959, 993
RsaNI GTAC 7 cut(s) 265, 506, 610, 644, 743, 958, 992
SacII CCGCGG 1 cut(s) 39
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 5 cut(s) 197, 234, 300, 518, 984
SatI GCNGC 5 cut(s) 209, 623, 768, 771, 852
Sau3AI GATC 1 cut(s) 696
Sau96I GGNCC 3 cut(s) 596, 784, 970
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 4 cut(s) 59, 601, 602, 725
SduI GDGCHC 3 cut(s) 325, 607, 955
SfaNI GCATC 6 cut(s) 132, 380, 409, 838, 896, 904
SfcI CTRYAG 1 cut(s) 209
SfoI GGCGCC 1 cut(s) 99
Sfr303I CCGCGG 1 cut(s) 39
SgrBI CCGCGG 1 cut(s) 39
SinI GGWCC 2 cut(s) 596, 970
SmaI CCCGGG 1 cut(s) 602
SpeI ACTAGT 1 cut(s) 718
Sse9I AATT 7 cut(s) 31, 201, 316, 337, 468, 661, 1005
SsiI CCGC 2 cut(s) 36, 38
SspDI GGCGCC 1 cut(s) 97
SspMI CTAG 2 cut(s) 719, 893
StyD4I CCNGG 4 cut(s) 57, 599, 600, 723
StyI CCWWGG 1 cut(s) 445
TaaI ACNGT 7 cut(s) 523, 580, 648, 781, 793, 931, 957
TaiI ACGT 2 cut(s) 1022, 1041
TaqI TCGA 3 cut(s) 44, 699, 807
TasI AATT 7 cut(s) 31, 201, 316, 337, 468, 661, 1005
TatI WGTACW 4 cut(s) 264, 609, 742, 957
TfiI GAWTC 2 cut(s) 250, 677
Tru1I TTAA 5 cut(s) 197, 234, 300, 518, 984
Tru9I TTAA 5 cut(s) 197, 234, 300, 518, 984
TscAI CASTG 1 cut(s) 960
TseFI GTSAC 2 cut(s) 165, 1015
TseI GCWGC 5 cut(s) 208, 622, 767, 770, 851
Tsp45I GTSAC 2 cut(s) 165, 1015
TspDTI ATGAA 2 cut(s) 429, 690
TspMI CCCGGG 1 cut(s) 600
TspRI CASTG 1 cut(s) 960
VpaK11BI GGWCC 2 cut(s) 596, 970
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 1 cut(s) 201
XceI RCATGY 3 cut(s) 462, 538, 762
XmaI CCCGGG 1 cut(s) 600
XmiI GTMKAC 2 cut(s) 44, 706
XspI CTAG 2 cut(s) 719, 893
Zsp2I ATGCAT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.