Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002591

Physical Location & Seq

Genomic Coordinates Reverse (-)

22571802 .. 22576053

Gene Structure 4252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G184000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGCTTCAGAGGATGTGAAACCGAGCGAATCGGCGGTCTCCACGATCGTCAATCTGGCTGAGGAGGCTAAGATGGCGAGAGAGGGCGTGGTCAAGGCTCCGAGCCTTGCGGTTCTCAGTGTCTGCAAGTCTCTGGTTGCTGGCGGAGTCGCTGGTGGAGTGTCTCGAACAGCTGTTGCTCCATTGGAGCGACTGAAAATATTGCTCCAGGTCCAGAATCCACATAACATAAAATACAATGGAACAATACAAGGCTTGAAATATATCTGGAGAAGTGAGGGTTTCCGTGGATTGTTTAAAGGAAATGGTACGAATTGTGCTCGTATTGTCCCCAACTCAGCTGTCAAGTTCTTCAGCTATGAGCAAGCTTCTAAAAGATGCTCAGCTCACTCCTCTTCTACGTCTTGGAGCTGGAGCATGTGCTGGAATTATTGCCATGTCTGCAACTTACCCGATGGACATGGTACGAGGAAGGCTAACTGTACAGACAGAGAACTCTCCCTTTCAGTACAGGGGAATGTTCCATGCTCTATCGACTGTGCTCCGCGAGGAGGGCCCGCGGGCTTTGTACAAGGGATGGCTTCCTTCTGTAATTGGAGTTTTGGATTGGAAGTTTCTTCATATGGACAATTAATGTCACCTGTTCCCTATGTTGGTCTCAACTTTGCTGTGTATGAATCCCTGAAGGATTGGTTAATCAAAAGTAGACCATTTGGACTTGTTGAAGATACAGACTTAAGTGTCACAACAAGGTTGGCATGCGGGGCTGCTGCTGGAACTGTTGGGCAAACTGTTGCTTACCCCCTTGATGTCATTCGTCGAAGGATGCAGATGGGGGGATGGAGTAATGCTGCTTCTGTTATCACTGGTGATGGGAGAAGCAAGGCCCCACTTGAATATACTGGCATGATTGATGCATTCAGGAAAACTGTTCGACATGAGGGCTTTGGAGCGTTGTACAAGGGTTTGGTTCCCAATTCCGTTAAGGTAGTGCCATCCATTGCAATTGCATTTGTGACGTATGAGATGGTGAAGGACGTTTTAGGAGTCGAGATCAGGATATCGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

357

Amino Acids

38.3

Weight (kDa)

8.99

Isoelectric Point (pI)

35.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01100 AT4G01100 AT4G01100
fragaria_vesca	FvH4_5g04080 FvH4_7g16030 FvH4_7g16030 FvH4_7g16030
malus_domestica	MD06G1102400.v1.1 MD07G1145800.v1.1 MD14G1121600.v1.1
prunus_persica	Prupe.2G184000_v2.0.a1 Prupe.5G115400_v2.0.a1 Prupe.5G115400_v2.0.a1 Prupe.5G115400_v2.0.a1
pyrus_communis	pycom01g10560 pycom06g09720 pycom07g14500
rosa_chinensis	RchiOBHm_Chr1g0358961 RchiOBHm_Chr7g0195421
rosa_laevigata	RLG00000004122 RLG00000027913
rosa_multiflora	Rmu_co7977584.1_g000001 Rmu_sc0008757.1_g000008 Rmu_sc0020160.1_g000001 Rmu_sc0037681.1_g000002
rosa_roxburghii	Rroxscaffold_3G00260500 Rroxscaffold_4G00297510
rosa_rugosa	Rorug01G0266400 Rorug01G0266500 Rorug07G0023100
rosa_samantha	Rh1AG280000 Rh1BG246800 Rh1CG264400 Rh1DG275200 Rh7AG150600 Rh7BG152000 Rh7CG155800 Rh7DG151600
rosa_wichuraiana	Rw1G024890 Rw7G012840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	740
AccI	GTMKAC	1 cut(s)	706
AccII	CGCG	2 cut(s)	547, 560
AciI	CCGC	7 cut(s)	35, 110, 144, 545, 558, 560, 762
AcuI	CTGAAG	2 cut(s)	337, 704
AfaI	GTAC	6 cut(s)	310, 466, 484, 510, 570, 959
AfiI	CCNNNNNNNGG	2 cut(s)	551, 653
AflII	CTTAAG	1 cut(s)	736
AgsI	TTSAA	3 cut(s)	259, 725, 896
AjnI	CCWGG	1 cut(s)	207
AluBI	AGCT	6 cut(s)	173, 341, 357, 368, 386, 411
AluI	AGCT	6 cut(s)	173, 341, 357, 368, 386, 411
Alw21I	GWGCWC	2 cut(s)	322, 544
Alw26I	GTCTC	4 cut(s)	43, 135, 168, 662
AlwNI	CAGNNNCTG	1 cut(s)	123
AoxI	GGCC	2 cut(s)	554, 885
ApaI	GGGCCC	1 cut(s)	558
ApeKI	GCWGC	3 cut(s)	767, 770, 851
ArsI	GACNNNNNNTTYG	2 cut(s)	21, 53
AseI	ATTAAT	1 cut(s)	632
AspS9I	GGNCC	4 cut(s)	211, 554, 555, 886
AsuHPI	GGTGA	3 cut(s)	630, 881, 1042
AvaII	GGWCC	1 cut(s)	211
BaeGI	GKGCMC	1 cut(s)	558
BanII	GRGCYC	1 cut(s)	558
BarI	GAAGNNNNNNTAC	2 cut(s)	838, 870
Bbv12I	GWGCWC	2 cut(s)	322, 544
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	3 cut(s)	754, 757, 838
BccI	CCATC	8 cut(s)	67, 449, 571, 826, 834, 866, 1003, 1021
BciT130I	CCWGG	1 cut(s)	209
BcoDI	GTCTC	4 cut(s)	43, 135, 168, 662
BfrI	CTTAAG	1 cut(s)	736
BisI	GCNGC	3 cut(s)	768, 771, 852
BlpI	GCTNAGC	1 cut(s)	382
BlsI	GCNGC	3 cut(s)	769, 772, 853
Bme1390I	CCNGG	1 cut(s)	209
Bme18I	GGWCC	1 cut(s)	211
BmgT120I	GGNCC	4 cut(s)	211, 554, 555, 886
BmiI	GGNNCC	4 cut(s)	99, 556, 888, 972
BmrFI	CCNGG	1 cut(s)	209
BmsI	GCATC	3 cut(s)	368, 816, 904
BpmI	CTGGAG	3 cut(s)	191, 289, 433
Bpu10I	CCTNAGC	1 cut(s)	60
Bpu1102I	GCTNAGC	1 cut(s)	382
BsaI	GGTCTC	2 cut(s)	43, 662
BsaJI	CCNNGG	2 cut(s)	286, 558
Bsc4I	CCNNNNNNNGG	2 cut(s)	551, 653
Bse1I	ACTGG	2 cut(s)	871, 907
Bse3DI	GCAATG	1 cut(s)	999
BseBI	CCWGG	1 cut(s)	209
BseDI	CCNNGG	2 cut(s)	286, 558
BseGI	GGATG	5 cut(s)	19, 582, 831, 845, 995
BseLI	CCNNNNNNNGG	2 cut(s)	551, 653
BseMI	GCAATG	1 cut(s)	999
BseMII	CTCAG	4 cut(s)	51, 130, 351, 396
BseNI	ACTGG	2 cut(s)	871, 907
BseRI	GAGGAG	3 cut(s)	77, 382, 564
BseSI	GKGCMC	1 cut(s)	558
BseXI	GCAGC	3 cut(s)	754, 757, 838
Bsh1236I	CGCG	2 cut(s)	547, 560
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	2 cut(s)	556, 887
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	322, 544
BslFI	GGGAC	1 cut(s)	314
BslI	CCNNNNNNNGG	2 cut(s)	551, 653
BsmAI	GTCTC	4 cut(s)	43, 135, 168, 662
BsmFI	GGGAC	1 cut(s)	314
BsmI	GAATGC	1 cut(s)	917
BsnI	GGCC	2 cut(s)	556, 887
Bso31I	GGTCTC	2 cut(s)	43, 662
Bsp120I	GGGCCC	1 cut(s)	554
Bsp1286I	GDGCHC	3 cut(s)	322, 544, 558
Bsp1407I	TGTACA	3 cut(s)	482, 568, 957
Bsp143I	GATC	2 cut(s)	45, 1053
Bsp1720I	GCTNAGC	1 cut(s)	382
BspACI	CCGC	7 cut(s)	35, 110, 144, 545, 558, 560, 762
BspANI	GGCC	2 cut(s)	556, 887
BspCNI	CTCAG	4 cut(s)	52, 129, 350, 395
BspFNI	CGCG	2 cut(s)	547, 560
BspLI	GGNNCC	4 cut(s)	99, 556, 888, 972
BspTI	CTTAAG	1 cut(s)	736
BspTNI	GGTCTC	2 cut(s)	43, 662
BsrDI	GCAATG	1 cut(s)	999
BsrGI	TGTACA	3 cut(s)	482, 568, 957
BsrI	ACTGG	2 cut(s)	871, 907
BssECI	CCNNGG	2 cut(s)	286, 558
BssMI	GATC	2 cut(s)	45, 1053
Bst2UI	CCWGG	1 cut(s)	209
Bst4CI	ACNGT	5 cut(s)	482, 539, 781, 793, 931
Bst6I	CTCTTC	1 cut(s)	400
BstAFI	CTTAAG	1 cut(s)	736
BstAUI	TGTACA	3 cut(s)	482, 568, 957
BstC8I	GCNNGC	5 cut(s)	142, 366, 558, 562, 760
BstDEI	CTNAG	5 cut(s)	60, 69, 116, 337, 382
BstDSI	CCRYGG	2 cut(s)	286, 558
BstF5I	GGATG	5 cut(s)	19, 582, 831, 845, 995
BstFNI	CGCG	2 cut(s)	547, 560
BstKTI	GATC	2 cut(s)	48, 1056
BstMAI	GTCTC	4 cut(s)	43, 135, 168, 662
BstMBI	GATC	2 cut(s)	45, 1053
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	5 cut(s)	65, 74, 441, 553, 764
BstNI	CCWGG	1 cut(s)	209
BstNSI	RCATGY	2 cut(s)	421, 762
BstSCI	CCNGG	1 cut(s)	207
BstSLI	GKGCMC	1 cut(s)	558
BstUI	CGCG	2 cut(s)	547, 560
BstV1I	GCAGC	3 cut(s)	754, 757, 838
BsuRI	GGCC	2 cut(s)	556, 887
BtgI	CCRYGG	2 cut(s)	286, 558
BtsCI	GGATG	5 cut(s)	19, 582, 831, 845, 995
BtsIMutI	CAGTG	2 cut(s)	124, 864
Cac8I	GCNNGC	5 cut(s)	142, 366, 558, 562, 760
CaiI	CAGNNNCTG	1 cut(s)	123
Cfr13I	GGNCC	4 cut(s)	211, 554, 555, 886
Cfr42I	CCGCGG	1 cut(s)	561
Csp6I	GTAC	6 cut(s)	309, 465, 483, 509, 569, 958
CviAII	CATG	7 cut(s)	418, 437, 461, 525, 759, 907, 938
CviQI	GTAC	6 cut(s)	309, 465, 483, 509, 569, 958
DdeI	CTNAG	5 cut(s)	60, 69, 116, 337, 382
DpnI	GATC	2 cut(s)	47, 1055
DpnII	GATC	2 cut(s)	45, 1053
DraI	TTTAAA	1 cut(s)	298
DrdI	GACNNNNNNGTC	1 cut(s)	740
DseDI	GACNNNNNNGTC	1 cut(s)	740
Eam1104I	CTCTTC	1 cut(s)	400
EarI	CTCTTC	1 cut(s)	400
EciI	GGCGGA	1 cut(s)	159
Eco24I	GRGCYC	1 cut(s)	558
Eco31I	GGTCTC	2 cut(s)	43, 662
Eco32I	GATATC	1 cut(s)	1062
Eco47I	GGWCC	1 cut(s)	211
Eco57I	CTGAAG	2 cut(s)	337, 704
EcoO109I	RGGNCCY	2 cut(s)	554, 886
EcoRII	CCWGG	1 cut(s)	207
EcoRV	GATATC	1 cut(s)	1062
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	1 cut(s)	558
FaeI	CATG	7 cut(s)	421, 440, 464, 528, 762, 910, 941
FaqI	GGGAC	1 cut(s)	314
FatI	CATG	7 cut(s)	417, 436, 460, 524, 758, 906, 937
FauI	CCCGC	3 cut(s)	553, 565, 755
FauNDI	CATATG	1 cut(s)	622
FblI	GTMKAC	1 cut(s)	706
Fnu4HI	GCNGC	3 cut(s)	768, 771, 852
FokI	GGATG	5 cut(s)	26, 589, 838, 852, 982
FriOI	GRGCYC	1 cut(s)	558
Fsp4HI	GCNGC	3 cut(s)	768, 771, 852
GluI	GCNGC	3 cut(s)	768, 771, 852
GsuI	CTGGAG	3 cut(s)	191, 289, 433
HaeIII	GGCC	2 cut(s)	556, 887
Hin1II	CATG	7 cut(s)	421, 440, 464, 528, 762, 910, 941
HindIII	AAGCTT	1 cut(s)	366
HinfI	GANTC	5 cut(s)	29, 147, 217, 677, 1047
HphI	GGTGA	3 cut(s)	630, 881, 1042
Hpy166II	GTNNAC	1 cut(s)	707
Hpy188I	TCNGA	3 cut(s)	10, 102, 1066
Hpy188III	TCNNGA	6 cut(s)	165, 214, 268, 922, 1051, 1057
Hpy8I	GTNNAC	1 cut(s)	707
Hpy99I	CGWCG	1 cut(s)	822
HpyAV	CCTTC	5 cut(s)	466, 595, 679, 816, 1027
HpyCH4III	ACNGT	5 cut(s)	482, 539, 781, 793, 931
HpyCH4IV	ACGT	3 cut(s)	401, 1019, 1038
HpyCH4V	TGCA	6 cut(s)	126, 444, 829, 917, 1004, 1010
HpyF10VI	GCNNNNNNNGC	5 cut(s)	65, 74, 441, 553, 764
HpyF3I	CTNAG	5 cut(s)	60, 69, 116, 337, 382
HpySE526I	ACGT	3 cut(s)	401, 1019, 1038
Hsp92II	CATG	7 cut(s)	421, 440, 464, 528, 762, 910, 941
KspI	CCGCGG	1 cut(s)	561
Kzo9I	GATC	2 cut(s)	45, 1053
LmnI	GCTCC	8 cut(s)	103, 184, 187, 210, 408, 414, 547, 950
Lsp1109I	GCAGC	3 cut(s)	754, 757, 838
LweI	GCATC	3 cut(s)	368, 816, 904
MaeII	ACGT	3 cut(s)	401, 1019, 1038
MaeIII	GTNAC	3 cut(s)	636, 742, 1015
MalI	GATC	2 cut(s)	47, 1055
MboI	GATC	2 cut(s)	45, 1053
MboII	GAAGA	4 cut(s)	343, 387, 609, 737
MfeI	CAATTG	1 cut(s)	1005
MhlI	GDGCHC	3 cut(s)	322, 544, 558
MluCI	AATT	6 cut(s)	313, 427, 592, 629, 976, 1005
MlyI	GAGTC	2 cut(s)	156, 1056
Mph1103I	ATGCAT	1 cut(s)	919
MseI	TTAA	5 cut(s)	297, 632, 695, 737, 984
MspA1I	CMGCKG	3 cut(s)	173, 341, 560
MspCI	CTTAAG	1 cut(s)	736
MspR9I	CCNGG	1 cut(s)	209
MunI	CAATTG	1 cut(s)	1005
Mva1269I	GAATGC	1 cut(s)	917
MvaI	CCWGG	1 cut(s)	209
MvnI	CGCG	2 cut(s)	547, 560
MwoI	GCNNNNNNNGC	5 cut(s)	65, 74, 441, 553, 764
NdeI	CATATG	1 cut(s)	622
NdeII	GATC	2 cut(s)	45, 1053
NlaIII	CATG	7 cut(s)	421, 440, 464, 528, 762, 910, 941
NlaIV	GGNNCC	4 cut(s)	99, 556, 888, 972
NmuCI	GTSAC	3 cut(s)	636, 742, 1015
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	2 cut(s)	421, 762
PaeI	GCATGC	1 cut(s)	762
PctI	GAATGC	1 cut(s)	917
PfeI	GAWTC	3 cut(s)	29, 217, 677
PkrI	GCNGC	3 cut(s)	769, 772, 853
Ple19I	CGATCG	1 cut(s)	48
PleI	GAGTC	2 cut(s)	155, 1055
PpsI	GAGTC	2 cut(s)	155, 1055
PshBI	ATTAAT	1 cut(s)	632
Psp6I	CCWGG	1 cut(s)	207
PspGI	CCWGG	1 cut(s)	207
PspN4I	GGNNCC	4 cut(s)	99, 556, 888, 972
PspOMI	GGGCCC	1 cut(s)	554
PspPI	GGNCC	4 cut(s)	211, 554, 555, 886
PstNI	CAGNNNCTG	1 cut(s)	123
PvuI	CGATCG	1 cut(s)	48
PvuII	CAGCTG	2 cut(s)	173, 341
RsaI	GTAC	6 cut(s)	310, 466, 484, 510, 570, 959
RsaNI	GTAC	6 cut(s)	309, 465, 483, 509, 569, 958
SacII	CCGCGG	1 cut(s)	561
SaqAI	TTAA	5 cut(s)	297, 632, 695, 737, 984
SatI	GCNGC	3 cut(s)	768, 771, 852
Sau3AI	GATC	2 cut(s)	45, 1053
Sau96I	GGNCC	4 cut(s)	211, 554, 555, 886
SchI	GAGTC	2 cut(s)	156, 1056
ScrFI	CCNGG	1 cut(s)	209
SduI	GDGCHC	3 cut(s)	322, 544, 558
SfaNI	GCATC	3 cut(s)	368, 816, 904
Sfr303I	CCGCGG	1 cut(s)	561
SgrBI	CCGCGG	1 cut(s)	561
SinI	GGWCC	1 cut(s)	211
SmlI	CTYRAG	1 cut(s)	736
SmoI	CTYRAG	1 cut(s)	736
SphI	GCATGC	1 cut(s)	762
Sse9I	AATT	6 cut(s)	313, 427, 592, 629, 976, 1005
SsiI	CCGC	7 cut(s)	35, 110, 144, 545, 558, 560, 762
SspI	AATATT	1 cut(s)	201
StyD4I	CCNGG	1 cut(s)	207
TaaI	ACNGT	5 cut(s)	482, 539, 781, 793, 931
TaiI	ACGT	3 cut(s)	404, 1022, 1041
TaqI	TCGA	5 cut(s)	166, 534, 820, 934, 1050
TasI	AATT	6 cut(s)	313, 427, 592, 629, 976, 1005
TatI	WGTACW	4 cut(s)	482, 508, 568, 957
TfiI	GAWTC	3 cut(s)	29, 217, 677
Tru1I	TTAA	5 cut(s)	297, 632, 695, 737, 984
Tru9I	TTAA	5 cut(s)	297, 632, 695, 737, 984
TscAI	CASTG	2 cut(s)	124, 871
TseFI	GTSAC	3 cut(s)	636, 742, 1015
TseI	GCWGC	3 cut(s)	767, 770, 851
Tsp45I	GTSAC	3 cut(s)	636, 742, 1015
TspDTI	ATGAA	2 cut(s)	609, 690
TspGWI	ACGGA	2 cut(s)	275, 970
TspRI	CASTG	2 cut(s)	124, 871
Vha464I	CTTAAG	1 cut(s)	736
VpaK11BI	GGWCC	1 cut(s)	211
VspI	ATTAAT	1 cut(s)	632
XceI	RCATGY	2 cut(s)	421, 762
XmiI	GTMKAC	1 cut(s)	706
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.