MD14G1215400.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
29892204 .. 29892511
308 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1215400.v1.1.491

Sequence Viewer

Length: 156 bp
ATGTACCAAATTAGATACAGCATTGATAATTCTGTCTATACAACTAAAAGGGCTTCCTTATCTAGAATTTTGTCGATAGTTTTTACTAAAAAGGTCGTACCCAGTGCACAAGGCTCCCGCTTTACGCAGGGTCTGGGAGAGGTGAATGTCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

52

Amino Acids

5.67

Weight (kDa)

10.28

Isoelectric Point (pI)

27.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 118
AcsI RAATTY 1 cut(s) 66
AfaI GTAC 2 cut(s) 5, 99
Alw21I GWGCWC 1 cut(s) 109
Alw44I GTGCAC 1 cut(s) 105
AlwNI CAGNNNCTG 1 cut(s) 133
ApaLI GTGCAC 1 cut(s) 105
ApoI RAATTY 1 cut(s) 66
AsuHPI GGTGA 1 cut(s) 154
BaeGI GKGCMC 1 cut(s) 109
Bbv12I GWGCWC 1 cut(s) 109
BfaI CTAG 2 cut(s) 63, 154
BmiI GGNNCC 1 cut(s) 115
BmrI ACTGGG 1 cut(s) 96
BmuI ACTGGG 1 cut(s) 96
Bse1I ACTGG 1 cut(s) 102
BseNI ACTGG 1 cut(s) 102
BseSI GKGCMC 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 109
Bsp1286I GDGCHC 1 cut(s) 109
BspACI CCGC 1 cut(s) 118
BspLI GGNNCC 1 cut(s) 115
BsrI ACTGG 1 cut(s) 102
BstSLI GKGCMC 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 109
CaiI CAGNNNCTG 1 cut(s) 133
Csp6I GTAC 2 cut(s) 4, 98
CviJI RGCY 3 cut(s) 53, 114, 153
CviKI_1 RGCY 3 cut(s) 53, 114, 153
CviQI GTAC 2 cut(s) 4, 98
FaiI YATR 1 cut(s) 39
FauI CCCGC 1 cut(s) 125
FspBI CTAG 2 cut(s) 63, 154
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 1 cut(s) 107
Hpy188III TCNNGA 1 cut(s) 63
Hpy8I GTNNAC 1 cut(s) 107
HpyCH4V TGCA 1 cut(s) 107
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 3 cut(s) 113, 115, 119
MaeI CTAG 2 cut(s) 63, 154
MhlI GDGCHC 1 cut(s) 109
MluCI AATT 3 cut(s) 9, 28, 66
MnlI CCTC 1 cut(s) 133
NlaIV GGNNCC 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 115
PstNI CAGNNNCTG 1 cut(s) 133
RsaI GTAC 2 cut(s) 5, 99
RsaNI GTAC 2 cut(s) 4, 98
SduI GDGCHC 1 cut(s) 109
SetI ASST 2 cut(s) 96, 144
SgeI CNNG 6 cut(s) 75, 114, 122, 129, 140, 146
Sse9I AATT 3 cut(s) 9, 28, 66
SsiI CCGC 1 cut(s) 118
SspMI CTAG 2 cut(s) 63, 154
TaqI TCGA 1 cut(s) 74
TasI AATT 3 cut(s) 9, 28, 66
TscAI CASTG 1 cut(s) 109
TspRI CASTG 1 cut(s) 109
VneI GTGCAC 1 cut(s) 105
XapI RAATTY 1 cut(s) 66
XbaI TCTAGA 1 cut(s) 62
XspI CTAG 2 cut(s) 63, 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.