Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009711

Physical Location & Seq

Genomic Coordinates Forward (+)

3927007 .. 3931723

Gene Structure 4717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G036300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1278 bp

ATGAGTTTGTTCGGTGCTTCTTCTCCTCCATGGGTTCTAAGGACCTCTCTTCTCACAGCACCCTCTTCTTCTTCATCTTCTTCTTCAAAATTCTCAAAATACCAATCATGCCCTTCTCCTCGCCTTTTATGCCGCGCCCAAGCCAACGTAGGCAGTGACTTCAAATTCGTTCTTCACGATGCCCTCGATTCCTCTGGAACCCCCACCTCCCTCGCCAGGGAGGCTAGGGAGGGGTTCTGCTCACAAATTCGCCATCTATCTGGTATAGAGAGGCAAACCAGCATTAGCATCAATAGATGTGTTGATCTGGGGAAAACAGCTCTTTACATTGCAGCAGAGGATGACTCCCTTGTGTCACATTCGTCAGTTCCGCTTCCGGTGGATGCTTTTATCAGTAGATTTGGTGATCTTTCCATGGACTATTGTTCTCACTACAACTCTTCATTCAGATCCTCTCCTGAGAGATTGTTGGAGAGTTTGGAAAATTATTTGTACGTAAACAAGGCTTTCCGAAGAACCAATGCAAGGCATCACTCCGAACCACGAGCTCTTTATCTCCACTCGGTTTTGACACATCGTTCAGGATCACCAGCAATGCTTTCACTAATATACTCAGAAATTTTGAAAATGCTTCGCCTATGGGGATTTTTGGATTTTGATGTGGAGATATTCTTTCCTCACGATCGTCATAGTCTTCCCAGAGGTTATCATAAACAGAAAAGCAAGGAATCTGATAATGCACACATATTGACATCACAAGGCCTTTTGGTGGAGATTTTAAGAAATTTGAAGGATGCATTCTGGCCATTTCAGCATGATCAACCAGGGAATTTATTCTTGAGGGCAGCACGTGCTGCTAACTTCATTGATAGATCAAACATTAATGAAGACAGTGGTTTTCAGCTGGCATCTGCTAAGGCTGCTCAACATAGACTAGATCGTGGTGTTTGGACTAGTGTACATTTTGGGGATATGAGGCGTGCCTTATCTGCATGTGAACGTCTTATTCTCCTGGAAGCTGATCCAAAGGAATTAAGAGACTACAGCATTCTTCTGTACCATTGTGGATTTTATGAACAATCACTTGAATATTTAAAGCTGTATCAGGACACAAAGAGTCGCCCACTACGGAGGCAACCATCCGATTCATTAGCCATTCTTGAGGAAGATGCTGTGGAGAAATTGATGATACGCCTTAACCTAATTTTGATGGAGGATGGTTGGAGCAGGCCGTCATATGTTAGAAATTTTCTTGGTAATAACTCTGAACCATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transglut_core2

Protein Analysis

426

Amino Acids

48.36

Weight (kDa)

8.11

Isoelectric Point (pI)

61.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009711)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g03070
malus_domestica	MD02G1286000.v1.1 MD02G1286500.v1.1 MD02G1286600.v1.1 MD02G1287000.v1.1 MD11G1310600.v1.1 MD14G1215400.v1.1
prunus_persica	Prupe.2G036300_v2.0.a1 Prupe.2G036300_v2.0.a1
pyrus_communis	pycom02g24330
rosa_chinensis	RchiOBHm_Chr1g0324301
rosa_laevigata	RLG00000030205
rosa_multiflora	Rmu_sc0001850.1_g000055 Rmu_sc0004082.1_g000025
rosa_roxburghii	Rroxscaffold_159G00432680 Rroxscaffold_4G00325710
rosa_rugosa	Rorug01G0044900
rosa_samantha	Rh1AG060800 Rh1BG052000 Rh1CG063100 Rh1DG067500
rosa_wichuraiana	Rw1G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	135
AciI	CCGC	2 cut(s)	133, 371
AclWI	GGATC	3 cut(s)	444, 592, 1016
AcoI	YGGCCR	1 cut(s)	803
AcsI	RAATTY	7 cut(s)	89, 164, 246, 618, 784, 829, 1246
AcvI	CACGTG	1 cut(s)	851
AfaI	GTAC	3 cut(s)	494, 960, 1058
AfiI	CCNNNNNNNGG	4 cut(s)	216, 217, 525, 769
AgsI	TTSAA	5 cut(s)	87, 163, 625, 790, 1088
AhlI	ACTAGT	1 cut(s)	953
AjnI	CCWGG	3 cut(s)	215, 823, 1011
AluBI	AGCT	5 cut(s)	320, 548, 904, 1019, 1099
AluI	AGCT	5 cut(s)	320, 548, 904, 1019, 1099
Alw21I	GWGCWC	1 cut(s)	550
Alw26I	GTCTC	1 cut(s)	1032
AlwI	GGATC	3 cut(s)	444, 592, 1016
AoxI	GGCC	3 cut(s)	760, 803, 1229
ApeKI	GCWGC	4 cut(s)	332, 845, 854, 920
ApoI	RAATTY	7 cut(s)	89, 164, 246, 618, 784, 829, 1246
ArsI	GACNNNNNNTTYG	2 cut(s)	149, 181
AseI	ATTAAT	1 cut(s)	882
Asp700I	GAANNNNTTC	1 cut(s)	833
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	1 cut(s)	42
AsuHPI	GGTGA	2 cut(s)	416, 579
AvaII	GGWCC	1 cut(s)	42
BalI	TGGCCA	1 cut(s)	805
BanII	GRGCYC	1 cut(s)	550
BauI	CACGAG	1 cut(s)	543
BbrPI	CACGTG	1 cut(s)	851
BbsI	GAAGAC	2 cut(s)	686, 894
Bbv12I	GWGCWC	1 cut(s)	550
BbvI	GCAGC	4 cut(s)	344, 841, 857, 907
BccI	CCATC	4 cut(s)	261, 1147, 1204, 1211
BceAI	ACGGC	1 cut(s)	1216
BciT130I	CCWGG	3 cut(s)	217, 825, 1013
BclI	TGATCA	1 cut(s)	817
BcoDI	GTCTC	1 cut(s)	1032
BcuI	ACTAGT	1 cut(s)	953
BfaI	CTAG	3 cut(s)	225, 935, 954
BfmI	CTRYAG	1 cut(s)	1042
BglI	GCCNNNNNGGC	1 cut(s)	221
BisI	GCNGC	5 cut(s)	133, 333, 846, 855, 921
BlsI	GCNGC	5 cut(s)	134, 334, 847, 856, 922
Bme1390I	CCNGG	3 cut(s)	217, 825, 1013
Bme18I	GGWCC	1 cut(s)	42
BmgT120I	GGNCC	1 cut(s)	42
BmiI	GGNNCC	1 cut(s)	199
BmrFI	CCNGG	3 cut(s)	217, 825, 1013
BmsI	GCATC	7 cut(s)	169, 297, 373, 538, 784, 917, 1159
BpiI	GAAGAC	2 cut(s)	686, 894
BplI	GAGNNNNNCTC	2 cut(s)	329, 361
Bpu10I	CCTNAGC	1 cut(s)	915
BpuEI	CTTGAG	2 cut(s)	859, 1181
BsaAI	YACGTR	2 cut(s)	496, 851
BsaJI	CCNNGG	5 cut(s)	29, 216, 414, 824, 1271
BsaWI	WCCGGW	1 cut(s)	376
Bsc4I	CCNNNNNNNGG	4 cut(s)	216, 217, 525, 769
Bse3DI	GCAATG	2 cut(s)	327, 600
BseBI	CCWGG	3 cut(s)	217, 825, 1013
BseDI	CCNNGG	5 cut(s)	29, 216, 414, 824, 1271
BseGI	GGATG	5 cut(s)	346, 388, 799, 1139, 1222
BseLI	CCNNNNNNNGG	4 cut(s)	216, 217, 525, 769
BseMI	GCAATG	2 cut(s)	327, 600
BseMII	CTCAG	2 cut(s)	450, 627
BseRI	GAGGAG	2 cut(s)	15, 108
BseXI	GCAGC	4 cut(s)	344, 841, 857, 907
Bsh1236I	CGCG	1 cut(s)	135
Bsh1285I	CGRYCG	1 cut(s)	685
BshFI	GGCC	3 cut(s)	762, 805, 1231
BsiEI	CGRYCG	1 cut(s)	685
BsiHKAI	GWGCWC	1 cut(s)	550
BsiSI	CCGG	1 cut(s)	377
BslI	CCNNNNNNNGG	4 cut(s)	216, 217, 525, 769
BsmAI	GTCTC	1 cut(s)	1032
BsmI	GAATGC	2 cut(s)	797, 1047
BsnI	GGCC	3 cut(s)	762, 805, 1231
Bsp1286I	GDGCHC	1 cut(s)	550
Bsp1407I	TGTACA	1 cut(s)	958
Bsp143I	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
Bsp19I	CCATGG	3 cut(s)	29, 414, 1271
BspACI	CCGC	2 cut(s)	133, 371
BspANI	GGCC	3 cut(s)	762, 805, 1231
BspCNI	CTCAG	2 cut(s)	451, 626
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	1 cut(s)	199
BspPI	GGATC	3 cut(s)	444, 592, 1016
BsrDI	GCAATG	2 cut(s)	327, 600
BsrGI	TGTACA	1 cut(s)	958
BssECI	CCNNGG	5 cut(s)	29, 216, 414, 824, 1271
BssMI	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	3 cut(s)	29, 414, 1271
Bst2BI	CACGAG	1 cut(s)	543
Bst2UI	CCWGG	3 cut(s)	217, 825, 1013
Bst4CI	ACNGT	1 cut(s)	893
Bst6I	CTCTTC	3 cut(s)	54, 70, 445
BstAPI	GCANNNNNTGC	2 cut(s)	851, 854
BstAUI	TGTACA	1 cut(s)	958
BstBAI	YACGTR	2 cut(s)	496, 851
BstC8I	GCNNGC	3 cut(s)	906, 981, 1229
BstDEI	CTNAG	4 cut(s)	38, 459, 613, 915
BstDSI	CCRYGG	3 cut(s)	29, 414, 1271
BstF5I	GGATG	5 cut(s)	346, 388, 799, 1139, 1222
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	9 cut(s)	307, 409, 452, 587, 685, 820, 875, 940, 1024
BstMAI	GTCTC	1 cut(s)	1032
BstMBI	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
BstMCI	CGRYCG	1 cut(s)	685
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 221, 811, 851, 854, 920, 989
BstNI	CCWGG	3 cut(s)	217, 825, 1013
BstNSI	RCATGY	1 cut(s)	996
BstSCI	CCNGG	3 cut(s)	215, 823, 1011
BstSFI	CTRYAG	1 cut(s)	1042
BstSNI	TACGTA	1 cut(s)	496
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	4 cut(s)	344, 841, 857, 907
BstV2I	GAAGAC	2 cut(s)	686, 894
BstX2I	RGATCY	1 cut(s)	449
BstXI	CCANNNNNNTGG	1 cut(s)	260
BstYI	RGATCY	1 cut(s)	449
BsuRI	GGCC	3 cut(s)	762, 805, 1231
BtgI	CCRYGG	3 cut(s)	29, 414, 1271
BtsCI	GGATG	5 cut(s)	346, 388, 799, 1139, 1222
BtsI	GCAGTG	1 cut(s)	160
BtsIMutI	CAGTG	2 cut(s)	160, 898
Cac8I	GCNNGC	3 cut(s)	906, 981, 1229
CfoI	GCGC	1 cut(s)	137
Cfr13I	GGNCC	1 cut(s)	42
Csp6I	GTAC	3 cut(s)	493, 959, 1057
CviAII	CATG	6 cut(s)	30, 108, 415, 815, 993, 1272
CviQI	GTAC	3 cut(s)	493, 959, 1057
DdeI	CTNAG	4 cut(s)	38, 459, 613, 915
DpnI	GATC	9 cut(s)	306, 408, 451, 586, 684, 819, 874, 939, 1023
DpnII	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
DraI	TTTAAA	1 cut(s)	1095
EaeI	YGGCCR	1 cut(s)	803
Eam1104I	CTCTTC	3 cut(s)	54, 70, 445
EarI	CTCTTC	3 cut(s)	54, 70, 445
Ecl136II	GAGCTC	1 cut(s)	548
Eco105I	TACGTA	1 cut(s)	496
Eco130I	CCWWGG	3 cut(s)	29, 414, 1271
Eco147I	AGGCCT	1 cut(s)	762
Eco24I	GRGCYC	1 cut(s)	550
Eco47I	GGWCC	1 cut(s)	42
Eco53kI	GAGCTC	1 cut(s)	548
Eco72I	CACGTG	1 cut(s)	851
EcoICRI	GAGCTC	1 cut(s)	548
EcoO109I	RGGNCCY	1 cut(s)	42
EcoRII	CCWGG	3 cut(s)	215, 823, 1011
EcoT14I	CCWWGG	3 cut(s)	29, 414, 1271
EcoT22I	ATGCAT	1 cut(s)	799
EcoT38I	GRGCYC	1 cut(s)	550
ErhI	CCWWGG	3 cut(s)	29, 414, 1271
FaeI	CATG	6 cut(s)	33, 111, 418, 818, 996, 1275
FatI	CATG	6 cut(s)	29, 107, 414, 814, 992, 1271
FauNDI	CATATG	1 cut(s)	1237
FbaI	TGATCA	1 cut(s)	817
Fnu4HI	GCNGC	5 cut(s)	133, 333, 846, 855, 921
FokI	GGATG	5 cut(s)	353, 395, 806, 1126, 1229
FriOI	GRGCYC	1 cut(s)	550
Fsp4HI	GCNGC	5 cut(s)	133, 333, 846, 855, 921
FspBI	CTAG	3 cut(s)	225, 935, 954
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	5 cut(s)	133, 333, 846, 855, 921
HaeIII	GGCC	3 cut(s)	762, 805, 1231
HapII	CCGG	1 cut(s)	377
HhaI	GCGC	1 cut(s)	137
Hin1II	CATG	6 cut(s)	33, 111, 418, 818, 996, 1275
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HinfI	GANTC	5 cut(s)	188, 344, 728, 1117, 1145
HpaII	CCGG	1 cut(s)	377
HphI	GGTGA	2 cut(s)	416, 579
Hpy166II	GTNNAC	3 cut(s)	499, 959, 998
Hpy188I	TCNGA	7 cut(s)	449, 512, 538, 616, 733, 1144, 1267
Hpy188III	TCNNGA	8 cut(s)	176, 195, 458, 582, 680, 838, 1106, 1160
Hpy8I	GTNNAC	3 cut(s)	499, 959, 998
HpyAV	CCTTC	2 cut(s)	123, 784
HpyCH4III	ACNGT	1 cut(s)	893
HpyCH4IV	ACGT	4 cut(s)	147, 495, 850, 1000
HpyCH4V	TGCA	5 cut(s)	332, 524, 740, 797, 992
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 221, 811, 851, 854, 920, 989
HpyF3I	CTNAG	4 cut(s)	38, 459, 613, 915
HpySE526I	ACGT	4 cut(s)	147, 495, 850, 1000
Hsp92II	CATG	6 cut(s)	33, 111, 418, 818, 996, 1275
HspAI	GCGC	1 cut(s)	135
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
LmnI	GCTCC	1 cut(s)	1224
Lsp1109I	GCAGC	4 cut(s)	344, 841, 857, 907
LweI	GCATC	7 cut(s)	169, 297, 373, 538, 784, 917, 1159
MaeI	CTAG	3 cut(s)	225, 935, 954
MaeII	ACGT	4 cut(s)	147, 495, 850, 1000
MaeIII	GTNAC	2 cut(s)	155, 354
MalI	GATC	9 cut(s)	306, 408, 451, 586, 684, 819, 874, 939, 1023
MboI	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
MflI	RGATCY	1 cut(s)	449
MhlI	GDGCHC	1 cut(s)	550
MlsI	TGGCCA	1 cut(s)	805
MluNI	TGGCCA	1 cut(s)	805
MlyI	GAGTC	2 cut(s)	338, 1126
MmeI	TCCRAC	2 cut(s)	450, 1202
Mox20I	TGGCCA	1 cut(s)	805
Mph1103I	ATGCAT	1 cut(s)	799
MroXI	GAANNNNTTC	1 cut(s)	833
MscI	TGGCCA	1 cut(s)	805
MseI	TTAA	5 cut(s)	779, 882, 1034, 1094, 1197
Msp20I	TGGCCA	1 cut(s)	805
MspA1I	CMGCKG	1 cut(s)	904
MspI	CCGG	1 cut(s)	377
MspR9I	CCNGG	3 cut(s)	217, 825, 1013
Mva1269I	GAATGC	2 cut(s)	797, 1047
MvaI	CCWGG	3 cut(s)	217, 825, 1013
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	7 cut(s)	129, 221, 811, 851, 854, 920, 989
NcoI	CCATGG	3 cut(s)	29, 414, 1271
NdeI	CATATG	1 cut(s)	1237
NdeII	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
NlaIII	CATG	6 cut(s)	33, 111, 418, 818, 996, 1275
NlaIV	GGNNCC	1 cut(s)	199
NmuCI	GTSAC	2 cut(s)	155, 354
NsiI	ATGCAT	1 cut(s)	799
NspI	RCATGY	1 cut(s)	996
PceI	AGGCCT	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 183
PctI	GAATGC	2 cut(s)	797, 1047
PdmI	GAANNNNTTC	1 cut(s)	833
PfeI	GAWTC	3 cut(s)	188, 728, 1145
PfoI	TCCNGGA	1 cut(s)	1011
PkrI	GCNGC	5 cut(s)	134, 334, 847, 856, 922
Ple19I	CGATCG	1 cut(s)	685
PleI	GAGTC	2 cut(s)	338, 1125
PmaCI	CACGTG	1 cut(s)	851
PmlI	CACGTG	1 cut(s)	851
PpsI	GAGTC	2 cut(s)	338, 1125
Ppu21I	YACGTR	2 cut(s)	496, 851
PpuMI	RGGWCCY	1 cut(s)	42
PshBI	ATTAAT	1 cut(s)	882
Psp124BI	GAGCTC	1 cut(s)	550
Psp5II	RGGWCCY	1 cut(s)	42
Psp6I	CCWGG	3 cut(s)	215, 823, 1011
PspCI	CACGTG	1 cut(s)	851
PspGI	CCWGG	3 cut(s)	215, 823, 1011
PspN4I	GGNNCC	1 cut(s)	199
PspPI	GGNCC	1 cut(s)	42
PspPPI	RGGWCCY	1 cut(s)	42
PsuI	RGATCY	1 cut(s)	449
PvuI	CGATCG	1 cut(s)	685
PvuII	CAGCTG	1 cut(s)	904
RsaI	GTAC	3 cut(s)	494, 960, 1058
RsaNI	GTAC	3 cut(s)	493, 959, 1057
SacI	GAGCTC	1 cut(s)	550
SaqAI	TTAA	5 cut(s)	779, 882, 1034, 1094, 1197
SatI	GCNGC	5 cut(s)	133, 333, 846, 855, 921
Sau3AI	GATC	9 cut(s)	304, 406, 449, 584, 682, 817, 872, 937, 1021
Sau96I	GGNCC	1 cut(s)	42
SchI	GAGTC	2 cut(s)	338, 1126
ScrFI	CCNGG	3 cut(s)	217, 825, 1013
SduI	GDGCHC	1 cut(s)	550
SfaNI	GCATC	7 cut(s)	169, 297, 373, 538, 784, 917, 1159
SfcI	CTRYAG	1 cut(s)	1042
SinI	GGWCC	1 cut(s)	42
SmlI	CTYRAG	2 cut(s)	838, 1160
SmoI	CTYRAG	2 cut(s)	838, 1160
SnaBI	TACGTA	1 cut(s)	496
SpeI	ACTAGT	1 cut(s)	953
SseBI	AGGCCT	1 cut(s)	762
SsiI	CCGC	2 cut(s)	133, 371
SspI	AATATT	1 cut(s)	1091
SspMI	CTAG	3 cut(s)	225, 935, 954
SstI	GAGCTC	1 cut(s)	550
StuI	AGGCCT	1 cut(s)	762
StyD4I	CCNGG	3 cut(s)	215, 823, 1011
StyI	CCWWGG	3 cut(s)	29, 414, 1271
TaaI	ACNGT	1 cut(s)	893
TaiI	ACGT	4 cut(s)	150, 498, 853, 1003
TaqI	TCGA	1 cut(s)	186
TatI	WGTACW	1 cut(s)	958
TauI	GCSGC	1 cut(s)	135
TfiI	GAWTC	3 cut(s)	188, 728, 1145
Tru1I	TTAA	5 cut(s)	779, 882, 1034, 1094, 1197
Tru9I	TTAA	5 cut(s)	779, 882, 1034, 1094, 1197
TscAI	CASTG	2 cut(s)	160, 898
TseFI	GTSAC	2 cut(s)	155, 354
TseI	GCWGC	4 cut(s)	332, 845, 854, 920
Tsp45I	GTSAC	2 cut(s)	155, 354
TspDTI	ATGAA	6 cut(s)	63, 432, 853, 900, 1089, 1137
TspGWI	ACGGA	1 cut(s)	1144
TspRI	CASTG	2 cut(s)	160, 898
VpaK11BI	GGWCC	1 cut(s)	42
VspI	ATTAAT	1 cut(s)	882
XapI	RAATTY	7 cut(s)	89, 164, 246, 618, 784, 829, 1246
XceI	RCATGY	1 cut(s)	996
XmnI	GAANNNNTTC	1 cut(s)	833
XspI	CTAG	3 cut(s)	225, 935, 954
Zsp2I	ATGCAT	1 cut(s)	799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.