Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003244

Physical Location & Seq

Genomic Coordinates Reverse (-)

1799346 .. 1802123

Gene Structure 2778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1029500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGATCTCTCTCTCTGATTTCACGATGCATTTTCTACTTCTTGTGATTTTTCCTCTTCTTCTTATCCTCCTCTTCAAATCTGTGTATTCGACCATATGGGTCCCACTGAGGACACAAACCCATTTCCAGAAGCAAGGCCTGCGCGGCCCCGCCTACCGTCCGGTCGTTGGAAACTCGGCCGAGATCGGCCGTATGTTCGCGGAGGCTCTCTCCAAGCCTTTCGCTTTCCACCACAACATTGTTCAACGCGTGGCCCCATTTTACCACCAGTGGTCCGTCATGTACGGGAAGAATTTCGTCTACTGGTTCGGGTTGAAGCCCCGAGTGGCTATATCCGACCCGGATACGATCAAGGAAATCCTTTTCAATTCGGGTGGGTCGTTTAGAAGGATCCCGTCTACACCTCTGACTAAGTATCTGCTTGGTGACTGGGGTCTCCTCGAGCTCGAGGGCGATAAGTGGGCTTTTCACAGAAGGATTGTAAACCAGGCTTTCACTATGGAGCGTGTCAAGAGTTGGGTTCCTGAGATTGTGGGGAGTACAATGAAGATGTTGGAGAAATGGGAGGATGTAAGAGGAGGGAGAGAAGAGTTTGAGTTGGATGTGCACAAAGAACTTCATCTGCTCTTAGGAGATGTCATATCGAGGACAGCTTTCGGAAGCTGTTTCGAGGAAGGAAAACATGTTTTCGACTTGCAAGAACAACAAATGCATCTTTGCATGAAGGCAGAAAGGAGCATTTACATTCCTGGATTCAGGTTTTTGCCTACCAAGAGTAACAGAGAAAGGTGGAGATTAGACAAGGAAAGTAGTGAATCCATACGGACGTTGATTGCGAAAAATGGCAAAAACAAGGGAGATTCAAGAAATCTGCTTAGTCTGTTAATGACGCCGTACAAGAATCCGGATGGTGAAGACGAAAAGTTAGGGATACAGGAAGTTATAGATGAATGCAAAACCTTCTACTTTGCAGGAAAGGAAACAACCGCCAATCTTTTGACTTGGGCACTACTACTTCTAGCACAGCATCCGGAATGGCAAAGCAAAGCTAGGGAAGAAGTATTCTGCGTTTTCGGAGACAATCAGCTCCCGGTTGCAGAGAACTTAAATGACCTCAAGAATATAACTATGATCGTTAATGAAACGCTCAGGCTCTACCCTCCAGCCCCGATGCTACCTAGGCAAGCAACAAAGAAGGTTAAGCTCGGGAGCCTGGAAATTCCTGCTGATGCACAACTTTATCTGATGTTGATCGCTATCCATCACGACACTGAGATATGGGGAGAAGATGCTCACGAATTCAATCCATCGAGGTTTTTGGAGTCTCGAAGGCATTCAGCCTCGTTCATCCCATTTGGCCTGGGGCCTCGAATCTGCGCAGGTCAAACTGCGGCCGTGGTTGAAGCAAAACTAGCATTGGCACTCATCATCCAGCGCTATTCTTTCAGGATGTCACCAACATATGTTCATGGCCCAATGCTCTTTTTAACTTTACAGCCCCAGTACGGCACTCAGATCATTTTCACCAAGGTTGCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0008395 GO:0009719 GO:0009725 GO:0009741 GO:0010033 GO:0010268 GO:0010817 GO:0014070 GO:0016128 GO:0016131 GO:0016491 GO:0033993 GO:0042221 GO:0042445 GO:0042592 GO:0044238 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901615 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

514

Amino Acids

58.91

Weight (kDa)

8.74

Isoelectric Point (pI)

40.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	87 - 487	2.5e-81	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75130
fragaria_vesca	FvH4_2g40040 FvH4_2g40040 FvH4_2g40051
malus_domestica	MD08G1032800.v1.1 MD08G1032900.v1.1 MD08G1033000.v1.1 MD15G1029500.v1.1 MD15G1029600.v1.1
prunus_persica	Prupe.1G381900_v2.0.a1 Prupe.1G381900_v2.0.a1
pyrus_communis	pycom08g02610
rosa_chinensis	RchiOBHm_Chr6g0300691 RchiOBHm_Chr6g0300701 RchiOBHm_Chr6g0300711
rosa_laevigata	RLG00000011309 RLG00000011310 RLG00000011311
rosa_multiflora	Rmu_sc0004226.1_g000009 Rmu_sc0014374.1_g000005 Rmu_sc0014374.1_g000013 Rmu_sc0014374.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167490 Rroxscaffold_7G00167500 Rroxscaffold_7G00167510
rosa_rugosa	Rorug06G0298300 Rorug06G0298400 Rorug06G0298500 Rorug06G0298600
rosa_samantha	Rh6BG418400 Rh6BG418500 Rh6CG425900 Rh6DG411300 Rh6DG411400
rosa_wichuraiana	Rw0G002170 Rw6G035980 Rw6G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1378
Acc36I	ACCTGC	1 cut(s)	1370
AccI	GTMKAC	2 cut(s)	300, 398
AccII	CGCG	3 cut(s)	144, 200, 249
AccIII	TCCGGA	2 cut(s)	904, 1030
AciI	CCGC	5 cut(s)	144, 150, 200, 987, 1391
AclWI	GGATC	2 cut(s)	385, 398
AcoI	YGGCCR	3 cut(s)	177, 187, 1392
AcsI	RAATTY	3 cut(s)	292, 1218, 1298
AcyI	GRCGYC	1 cut(s)	890
AfaI	GTAC	4 cut(s)	284, 541, 896, 1505
AfeI	AGCGCT	1 cut(s)	1436
AfiI	CCNNNNNNNGG	2 cut(s)	167, 1505
AflIII	ACRYGT	2 cut(s)	247, 682
AgsI	TTSAA	7 cut(s)	76, 245, 316, 367, 864, 1303, 1403
AjnI	CCWGG	4 cut(s)	486, 748, 1212, 1359
AluBI	AGCT	6 cut(s)	445, 653, 663, 1049, 1087, 1204
AluI	AGCT	6 cut(s)	445, 653, 663, 1049, 1087, 1204
Alw21I	GWGCWC	2 cut(s)	447, 609
Alw26I	GTCTC	3 cut(s)	440, 1071, 1329
Alw44I	GTGCAC	1 cut(s)	605
AlwI	GGATC	2 cut(s)	385, 398
Ama87I	CYCGRG	4 cut(s)	321, 440, 446, 1205
Aor13HI	TCCGGA	2 cut(s)	904, 1030
Aor51HI	AGCGCT	1 cut(s)	1436
AoxI	GGCC	9 cut(s)	136, 145, 177, 187, 252, 1357, 1364, 1392, 1471
ApaLI	GTGCAC	1 cut(s)	605
ApoI	RAATTY	3 cut(s)	292, 1218, 1298
Asp700I	GAANNNNTTC	2 cut(s)	293, 1333
AspA2I	CCTAGG	1 cut(s)	1178
AspLEI	GCGC	3 cut(s)	144, 1379, 1437
AspS9I	GGNCC	6 cut(s)	100, 146, 253, 273, 1364, 1472
AsuC2I	CCSGG	2 cut(s)	341, 1091
AsuHPI	GGTGA	4 cut(s)	437, 923, 1446, 1516
AvaI	CYCGRG	4 cut(s)	321, 440, 446, 1205
AvaII	GGWCC	2 cut(s)	100, 273
AvrII	CCTAGG	1 cut(s)	1178
BaeGI	GKGCMC	2 cut(s)	609, 1009
BamHI	GGATCC	1 cut(s)	390
BanII	GRGCYC	1 cut(s)	447
BbsI	GAAGAC	1 cut(s)	921
Bbv12I	GWGCWC	2 cut(s)	447, 609
BccI	CCATC	3 cut(s)	902, 1269, 1315
BceAI	ACGGC	4 cut(s)	174, 877, 1379, 1522
BciT130I	CCWGG	4 cut(s)	488, 750, 1214, 1361
BciVI	GTATCC	2 cut(s)	337, 924
BcnI	CCSGG	2 cut(s)	341, 1091
BcoDI	GTCTC	3 cut(s)	440, 1071, 1329
BfaI	CTAG	4 cut(s)	1019, 1050, 1179, 1412
BfoI	RGCGCY	1 cut(s)	1438
BfuAI	ACCTGC	1 cut(s)	1370
BfuI	GTATCC	2 cut(s)	337, 924
BglI	GCCNNNNNGGC	1 cut(s)	144
BisI	GCNGC	2 cut(s)	145, 1392
BlnI	CCTAGG	1 cut(s)	1178
BlsI	GCNGC	2 cut(s)	146, 1393
Bme1390I	CCNGG	6 cut(s)	341, 488, 750, 1091, 1214, 1361
Bme18I	GGWCC	2 cut(s)	100, 273
BmeT110I	CYCGRG	4 cut(s)	321, 440, 446, 1205
BmgT120I	GGNCC	6 cut(s)	100, 146, 253, 273, 1364, 1472
BmiI	GGNNCC	8 cut(s)	101, 102, 148, 255, 392, 522, 1211, 1365
BmrFI	CCNGG	6 cut(s)	341, 488, 750, 1091, 1214, 1361
BmrI	ACTGGG	2 cut(s)	439, 1495
BmsI	GCATC	6 cut(s)	15, 721, 1036, 1161, 1219, 1279
BmuI	ACTGGG	2 cut(s)	439, 1495
BoxI	GACNNNNGTC	1 cut(s)	432
BpiI	GAAGAC	1 cut(s)	921
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
BpmI	CTGGAG	1 cut(s)	1146
Bpu10I	CCTNAGC	1 cut(s)	1148
BpuEI	CTTGAG	1 cut(s)	1100
BpuMI	CCSGG	2 cut(s)	341, 1091
BsaBI	GATNNNNATC	2 cut(s)	1250, 1256
BsaHI	GRCGYC	1 cut(s)	890
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	4 cut(s)	1178, 1360, 1395, 1527
BsaWI	WCCGGW	3 cut(s)	160, 904, 1030
Bsc4I	CCNNNNNNNGG	2 cut(s)	167, 1505
Bse1I	ACTGG	4 cut(s)	268, 308, 434, 1501
Bse8I	GATNNNNATC	2 cut(s)	1250, 1256
BseAI	TCCGGA	2 cut(s)	904, 1030
BseBI	CCWGG	4 cut(s)	488, 750, 1214, 1361
BseDI	CCNNGG	4 cut(s)	1178, 1360, 1395, 1527
BseGI	GGATG	7 cut(s)	574, 607, 913, 1027, 1347, 1428, 1455
BseJI	GATNNNNATC	2 cut(s)	1250, 1256
BseLI	CCNNNNNNNGG	2 cut(s)	167, 1505
BseMII	CTCAG	5 cut(s)	98, 516, 1162, 1263, 1526
BseNI	ACTGG	4 cut(s)	268, 308, 434, 1501
BseRI	GAGGAG	3 cut(s)	59, 428, 591
BseSI	GKGCMC	2 cut(s)	609, 1009
BseX3I	CGGCCG	3 cut(s)	177, 187, 1392
Bsh1236I	CGCG	3 cut(s)	144, 200, 249
Bsh1285I	CGRYCG	4 cut(s)	165, 180, 190, 1395
BshFI	GGCC	9 cut(s)	138, 147, 179, 189, 254, 1359, 1366, 1394, 1473
BsiEI	CGRYCG	4 cut(s)	165, 180, 190, 1395
BsiHKAI	GWGCWC	2 cut(s)	447, 609
BsiHKCI	CYCGRG	4 cut(s)	321, 440, 446, 1205
BsiSI	CCGG	5 cut(s)	161, 341, 905, 1031, 1091
BslFI	GGGAC	1 cut(s)	86
BslI	CCNNNNNNNGG	2 cut(s)	167, 1505
BsmAI	GTCTC	3 cut(s)	440, 1071, 1329
BsmFI	GGGAC	1 cut(s)	86
BsmI	GAATGC	2 cut(s)	956, 1333
BsnI	GGCC	9 cut(s)	138, 147, 179, 189, 254, 1359, 1366, 1394, 1473
Bso31I	GGTCTC	1 cut(s)	440
BsoBI	CYCGRG	4 cut(s)	321, 440, 446, 1205
Bsp1286I	GDGCHC	3 cut(s)	447, 609, 1009
Bsp13I	TCCGGA	2 cut(s)	904, 1030
Bsp143I	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
BspACI	CCGC	5 cut(s)	144, 150, 200, 987, 1391
BspANI	GGCC	9 cut(s)	138, 147, 179, 189, 254, 1359, 1366, 1394, 1473
BspCNI	CTCAG	5 cut(s)	99, 517, 1161, 1264, 1525
BspEI	TCCGGA	2 cut(s)	904, 1030
BspFNI	CGCG	3 cut(s)	144, 200, 249
BspLI	GGNNCC	8 cut(s)	101, 102, 148, 255, 392, 522, 1211, 1365
BspMI	ACCTGC	1 cut(s)	1370
BspPI	GGATC	2 cut(s)	385, 398
BspTNI	GGTCTC	1 cut(s)	440
BsrI	ACTGG	4 cut(s)	268, 308, 434, 1501
BssECI	CCNNGG	4 cut(s)	1178, 1360, 1395, 1527
BssMI	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
BssNI	GRCGYC	1 cut(s)	890
BssT1I	CCWWGG	2 cut(s)	1178, 1527
Bst2UI	CCWGG	4 cut(s)	488, 750, 1214, 1361
Bst4CI	ACNGT	1 cut(s)	158
Bst6I	CTCTTC	3 cut(s)	60, 77, 582
BstACI	GRCGYC	1 cut(s)	890
BstAPI	GCANNNNNTGC	1 cut(s)	139
BstC8I	GCNNGC	2 cut(s)	140, 1185
BstDEI	CTNAG	8 cut(s)	107, 411, 525, 628, 875, 1148, 1272, 1512
BstDSI	CCRYGG	1 cut(s)	1395
BstF5I	GGATG	7 cut(s)	574, 607, 913, 1027, 1347, 1428, 1455
BstFNI	CGCG	3 cut(s)	144, 200, 249
BstH2I	RGCGCY	1 cut(s)	1438
BstHHI	GCGC	3 cut(s)	144, 1379, 1437
BstKTI	GATC	7 cut(s)	6, 186, 351, 393, 1134, 1254, 1518
BstMAI	GTCTC	3 cut(s)	440, 1071, 1329
BstMBI	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
BstMCI	CGRYCG	4 cut(s)	165, 180, 190, 1395
BstMWI	GCNNNNNNNGC	4 cut(s)	139, 144, 1180, 1412
BstNI	CCWGG	4 cut(s)	488, 750, 1214, 1361
BstNSI	RCATGY	1 cut(s)	686
BstPAI	GACNNNNGTC	1 cut(s)	432
BstSCI	CCNGG	6 cut(s)	339, 486, 748, 1089, 1212, 1359
BstSLI	GKGCMC	2 cut(s)	609, 1009
BstUI	CGCG	3 cut(s)	144, 200, 249
BstV2I	GAAGAC	1 cut(s)	921
BstX2I	RGATCY	1 cut(s)	390
BstYI	RGATCY	1 cut(s)	390
BstZI	CGGCCG	3 cut(s)	177, 187, 1392
BsuI	GTATCC	2 cut(s)	337, 924
BsuRI	GGCC	9 cut(s)	138, 147, 179, 189, 254, 1359, 1366, 1394, 1473
BtgI	CCRYGG	1 cut(s)	1395
BtsCI	GGATG	7 cut(s)	574, 607, 913, 1027, 1347, 1428, 1455
BtsIMutI	CAGTG	3 cut(s)	104, 275, 1269
BveI	ACCTGC	1 cut(s)	1370
Cac8I	GCNNGC	2 cut(s)	140, 1185
CfoI	GCGC	3 cut(s)	144, 1379, 1437
Cfr13I	GGNCC	6 cut(s)	100, 146, 253, 273, 1364, 1472
CseI	GACGC	1 cut(s)	898
Csp6I	GTAC	4 cut(s)	283, 540, 895, 1504
CspCI	CAANNNNNGTGG	2 cut(s)	355, 390
CviAII	CATG	4 cut(s)	280, 683, 721, 1469
CviQI	GTAC	4 cut(s)	283, 540, 895, 1504
DdeI	CTNAG	8 cut(s)	107, 411, 525, 628, 875, 1148, 1272, 1512
DpnI	GATC	7 cut(s)	5, 185, 350, 392, 1133, 1253, 1517
DpnII	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
EaeI	YGGCCR	3 cut(s)	177, 187, 1392
EagI	CGGCCG	3 cut(s)	177, 187, 1392
Eam1104I	CTCTTC	3 cut(s)	60, 77, 582
EarI	CTCTTC	3 cut(s)	60, 77, 582
Ecl136II	GAGCTC	1 cut(s)	445
EclXI	CGGCCG	3 cut(s)	177, 187, 1392
Eco130I	CCWWGG	2 cut(s)	1178, 1527
Eco147I	AGGCCT	1 cut(s)	138
Eco24I	GRGCYC	1 cut(s)	447
Eco31I	GGTCTC	1 cut(s)	440
Eco47I	GGWCC	2 cut(s)	100, 273
Eco47III	AGCGCT	1 cut(s)	1436
Eco52I	CGGCCG	3 cut(s)	177, 187, 1392
Eco53kI	GAGCTC	1 cut(s)	445
Eco88I	CYCGRG	4 cut(s)	321, 440, 446, 1205
EcoICRI	GAGCTC	1 cut(s)	445
EcoO109I	RGGNCCY	2 cut(s)	100, 1364
EcoRI	GAATTC	1 cut(s)	1298
EcoRII	CCWGG	4 cut(s)	486, 748, 1212, 1359
EcoT14I	CCWWGG	2 cut(s)	1178, 1527
EcoT22I	ATGCAT	2 cut(s)	30, 714
EcoT38I	GRGCYC	1 cut(s)	447
ErhI	CCWWGG	2 cut(s)	1178, 1527
FaeI	CATG	4 cut(s)	283, 686, 724, 1472
FaqI	GGGAC	1 cut(s)	86
FatI	CATG	4 cut(s)	279, 682, 720, 1468
FauI	CCCGC	1 cut(s)	157
FauNDI	CATATG	2 cut(s)	95, 1462
FblI	GTMKAC	2 cut(s)	300, 398
Fnu4HI	GCNGC	2 cut(s)	145, 1392
FokI	GGATG	7 cut(s)	581, 614, 920, 1014, 1334, 1415, 1462
FriOI	GRGCYC	1 cut(s)	447
Fsp4HI	GCNGC	2 cut(s)	145, 1392
FspBI	CTAG	4 cut(s)	1019, 1050, 1179, 1412
FspI	TGCGCA	1 cut(s)	1378
GlaI	GCGC	3 cut(s)	143, 1378, 1436
GluI	GCNGC	2 cut(s)	145, 1392
GsuI	CTGGAG	1 cut(s)	1146
HaeII	RGCGCY	1 cut(s)	1438
HaeIII	GGCC	9 cut(s)	138, 147, 179, 189, 254, 1359, 1366, 1394, 1473
HapII	CCGG	5 cut(s)	161, 341, 905, 1031, 1091
HgaI	GACGC	1 cut(s)	898
HhaI	GCGC	3 cut(s)	144, 1379, 1437
Hin1I	GRCGYC	1 cut(s)	890
Hin1II	CATG	4 cut(s)	283, 686, 724, 1472
Hin6I	GCGC	3 cut(s)	142, 1377, 1435
HinP1I	GCGC	3 cut(s)	142, 1377, 1435
HinfI	GANTC	6 cut(s)	753, 815, 860, 901, 1322, 1371
HpaII	CCGG	5 cut(s)	161, 341, 905, 1031, 1091
HphI	GGTGA	4 cut(s)	437, 923, 1446, 1516
Hpy166II	GTNNAC	4 cut(s)	301, 399, 484, 607
Hpy188I	TCNGA	7 cut(s)	16, 337, 408, 659, 1076, 1245, 1515
Hpy8I	GTNNAC	4 cut(s)	301, 399, 484, 607
HpyAV	CCTTC	7 cut(s)	381, 468, 668, 718, 970, 1189, 1323
HpyCH4III	ACNGT	1 cut(s)	158
HpyCH4IV	ACGT	1 cut(s)	827
HpyF10VI	GCNNNNNNNGC	4 cut(s)	139, 144, 1180, 1412
HpyF3I	CTNAG	8 cut(s)	107, 411, 525, 628, 875, 1148, 1272, 1512
HpySE526I	ACGT	1 cut(s)	827
Hsp92I	GRCGYC	1 cut(s)	890
Hsp92II	CATG	4 cut(s)	283, 686, 724, 1472
HspAI	GCGC	3 cut(s)	142, 1377, 1435
KflI	GGGWCCC	1 cut(s)	100
Kpn2I	TCCGGA	2 cut(s)	904, 1030
Kzo9I	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
LmnI	GCTCC	4 cut(s)	502, 735, 1092, 1209
LweI	GCATC	6 cut(s)	15, 721, 1036, 1161, 1219, 1279
MaeI	CTAG	4 cut(s)	1019, 1050, 1179, 1412
MaeII	ACGT	1 cut(s)	827
MaeIII	GTNAC	3 cut(s)	425, 776, 1452
MalI	GATC	7 cut(s)	5, 185, 350, 392, 1133, 1253, 1517
MboI	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
MboII	GAAGA	9 cut(s)	47, 50, 64, 301, 559, 599, 926, 1067, 1298
MflI	RGATCY	1 cut(s)	390
MhlI	GDGCHC	3 cut(s)	447, 609, 1009
MluCI	AATT	5 cut(s)	292, 367, 1218, 1298, 1537
MluI	ACGCGT	1 cut(s)	247
MlyI	GAGTC	1 cut(s)	1331
MmeI	TCCRAC	4 cut(s)	148, 360, 534, 579
Mph1103I	ATGCAT	2 cut(s)	30, 714
MroI	TCCGGA	2 cut(s)	904, 1030
MroXI	GAANNNNTTC	2 cut(s)	293, 1333
MseI	TTAA	5 cut(s)	884, 1106, 1137, 1200, 1487
MspI	CCGG	5 cut(s)	161, 341, 905, 1031, 1091
MspR9I	CCNGG	6 cut(s)	341, 488, 750, 1091, 1214, 1361
Mva1269I	GAATGC	2 cut(s)	956, 1333
MvaI	CCWGG	4 cut(s)	488, 750, 1214, 1361
MvnI	CGCG	3 cut(s)	144, 200, 249
MwoI	GCNNNNNNNGC	4 cut(s)	139, 144, 1180, 1412
NciI	CCSGG	2 cut(s)	341, 1091
NdeI	CATATG	2 cut(s)	95, 1462
NdeII	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
NlaIII	CATG	4 cut(s)	283, 686, 724, 1472
NlaIV	GGNNCC	8 cut(s)	101, 102, 148, 255, 392, 522, 1211, 1365
NmeAIII	GCCGAG	2 cut(s)	155, 205
NmuCI	GTSAC	2 cut(s)	425, 1452
NsbI	TGCGCA	1 cut(s)	1378
NsiI	ATGCAT	2 cut(s)	30, 714
NspI	RCATGY	1 cut(s)	686
PaeR7I	CTCGAG	2 cut(s)	440, 446
PceI	AGGCCT	1 cut(s)	138
PciI	ACATGT	1 cut(s)	682
PcsI	WCGNNNNNNNCGW	2 cut(s)	377, 833
PctI	GAATGC	2 cut(s)	956, 1333
PdmI	GAANNNNTTC	2 cut(s)	293, 1333
PfeI	GAWTC	5 cut(s)	753, 815, 860, 901, 1371
PfoI	TCCNGGA	1 cut(s)	748
PkrI	GCNGC	2 cut(s)	146, 1393
PleI	GAGTC	1 cut(s)	1330
PpsI	GAGTC	1 cut(s)	1330
PpuMI	RGGWCCY	1 cut(s)	100
PscI	ACATGT	1 cut(s)	682
PshAI	GACNNNNGTC	1 cut(s)	432
Psp124BI	GAGCTC	1 cut(s)	447
Psp5II	RGGWCCY	1 cut(s)	100
Psp6I	CCWGG	4 cut(s)	486, 748, 1212, 1359
PspGI	CCWGG	4 cut(s)	486, 748, 1212, 1359
PspN4I	GGNNCC	8 cut(s)	101, 102, 148, 255, 392, 522, 1211, 1365
PspPI	GGNCC	6 cut(s)	100, 146, 253, 273, 1364, 1472
PspPPI	RGGWCCY	1 cut(s)	100
PspXI	VCTCGAGB	2 cut(s)	440, 446
PsuI	RGATCY	1 cut(s)	390
RsaI	GTAC	4 cut(s)	284, 541, 896, 1505
RsaNI	GTAC	4 cut(s)	283, 540, 895, 1504
SacI	GAGCTC	1 cut(s)	447
SaqAI	TTAA	5 cut(s)	884, 1106, 1137, 1200, 1487
SatI	GCNGC	2 cut(s)	145, 1392
Sau3AI	GATC	7 cut(s)	3, 183, 348, 390, 1131, 1251, 1515
Sau96I	GGNCC	6 cut(s)	100, 146, 253, 273, 1364, 1472
SchI	GAGTC	1 cut(s)	1331
ScrFI	CCNGG	6 cut(s)	341, 488, 750, 1091, 1214, 1361
SduI	GDGCHC	3 cut(s)	447, 609, 1009
SfaNI	GCATC	6 cut(s)	15, 721, 1036, 1161, 1219, 1279
SfiI	GGCCNNNNNGGCC	1 cut(s)	144
Sfr274I	CTCGAG	2 cut(s)	440, 446
SinI	GGWCC	2 cut(s)	100, 273
SlaI	CTCGAG	2 cut(s)	440, 446
SmlI	CTYRAG	3 cut(s)	440, 446, 1115
SmoI	CTYRAG	3 cut(s)	440, 446, 1115
Sse9I	AATT	5 cut(s)	292, 367, 1218, 1298, 1537
SseBI	AGGCCT	1 cut(s)	138
SsiI	CCGC	5 cut(s)	144, 150, 200, 987, 1391
SspMI	CTAG	4 cut(s)	1019, 1050, 1179, 1412
SstI	GAGCTC	1 cut(s)	447
StuI	AGGCCT	1 cut(s)	138
StyD4I	CCNGG	6 cut(s)	339, 486, 748, 1089, 1212, 1359
StyI	CCWWGG	2 cut(s)	1178, 1527
TaaI	ACNGT	1 cut(s)	158
TaiI	ACGT	1 cut(s)	830
TaqI	TCGA	9 cut(s)	89, 441, 447, 644, 669, 690, 1310, 1327, 1369
TasI	AATT	5 cut(s)	292, 367, 1218, 1298, 1537
TatI	WGTACW	1 cut(s)	539
TauI	GCSGC	2 cut(s)	147, 1394
TfiI	GAWTC	5 cut(s)	753, 815, 860, 901, 1371
Tru1I	TTAA	5 cut(s)	884, 1106, 1137, 1200, 1487
Tru9I	TTAA	5 cut(s)	884, 1106, 1137, 1200, 1487
TscAI	CASTG	3 cut(s)	111, 275, 1276
TseFI	GTSAC	2 cut(s)	425, 1452
Tsp45I	GTSAC	2 cut(s)	425, 1452
TspDTI	ATGAA	7 cut(s)	560, 608, 737, 963, 1155, 1336, 1457
TspGWI	ACGGA	2 cut(s)	265, 838
TspRI	CASTG	3 cut(s)	111, 275, 1276
VneI	GTGCAC	1 cut(s)	605
VpaK11BI	GGWCC	2 cut(s)	100, 273
XapI	RAATTY	3 cut(s)	292, 1218, 1298
XceI	RCATGY	1 cut(s)	686
XhoI	CTCGAG	2 cut(s)	440, 446
XmaJI	CCTAGG	1 cut(s)	1178
XmiI	GTMKAC	2 cut(s)	300, 398
XmnI	GAANNNNTTC	2 cut(s)	293, 1333
XspI	CTAG	4 cut(s)	1019, 1050, 1179, 1412
Zsp2I	ATGCAT	2 cut(s)	30, 714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.