Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0003244

Physical Location & Seq

Genomic Coordinates Reverse (-)

60849500 .. 60851561

Gene Structure 2062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG425900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGCATCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCATTTCCCCCTGGTTATCTTCCTCTTCAAATTTGCCTACTCAACCCCATGGAGGACGCAAACCCACTTCAGAAAGCAAGGCATAAGGGGCCCCGGCTACCGTCCGATCTTCGGAAACTCCGCCGAGATCCGCCGTCTGTTCGCCGAAGCTCTCTCAAAGCGAGTCCCATTCGACCACGACATCGCTCCACGCGCGATTCCATTCTACCACAGGTGGTCCAGCATGTACGGGAAGACTTTCCTCTACTGGTTCGGGCCCAATCCCAGGCTGGCAATATCCGACCCGGATTTGATCAAAGAAGTCCTTGTCAATTCCAGTGGGTCGTTTCAAAAGATACCCTTTACCCCTTTAACCAAAAACCTCTTCGGAGAAGGACTCGTAGGCCTCGAAGGCGATGATTGGGCCTTTCATAGAAGGATCGTCAACCAGGCCTTCAAAATGGAGCGGGTCAAGGGTTGGGTGCCTGAAATTGTGGGGAGTGCCATGAAGGTGTTGGAGAAGTGGGAGGGTATAAGAGGAGAGAAAGATGAGTTTGAGATGGATGTGCACAAAGAATTTCATGATCTTTCTGCTGATGTTATATCGAGAACAGCTTTTGGAAGCAGTTTTGAGGAGGGAAAGCGAATTTTCAACTTGCAAGAACAACAAATGCATCTTTTCTCTAAGGCGGTTAGGAGCATCTACATTCCTGGATTCAGGTTTTTACCCACCAAGAATAACAGAGAAAGGTGGAGACTACAAAAGGAAACTAGTGAATCAATACGGATGTTGATCTTGAATAGTCCCAAAACAAGAGAAGATTCAACAAATTTACTCAGTCTGTTAATGTCTTCTTACAAGAACCAGAGTGGTGAAGAAGAAAAATTAGGGTTGGAGGATATAATAGCTGAATGCAAGACCTTCTACCTTGCAGGAAGTGAAACAACTGCTTCTCTTTTGACTTGGGCACTTCTCCTTCTAGCCCGCCATCAGGATTGGCAAAGCAAGGCTAGGGAAGAAGTGATTCGCGCTAGCGGAGACAATAAGCTTCCTACTGCAGAGAATTTGAATGATCTTAAGATTGTAAGCCTGATAGTTAACGAAACACTTAGACTCTACCCTCCAGCTGTGATGCTAATGAGGCAAACATCAAAGAAGGTTAAGCTTGGGGACCTTGACATTCCTGCTCACACACAACTCTACTTGGCCTTGACCGCTGTCCATCACGACACTGACATATGGGGAGAAGATGCTAATGAGTTCAATCCCTCGAGGTTTTCAGAGCCTCGAAAGCATTTAGCCTCATTCCTTCCATTTGGTCTGGGGCCTAGAATCTGCGCAGGTCAAAACTTGGCTCTGGTTGAAGCAAAACTGGTCTTAGCAACCATCATCCGCCACTATTCTTTTGTGGTGTCTCCAACCTATGTCCATGCACCAATGTTGTTTATTAGTTTACAGCCTCAATATGGTGCTCAAATCCTCTTTAGGAAGATTCCAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0008395 GO:0009719 GO:0009725 GO:0009741 GO:0010033 GO:0010268 GO:0010817 GO:0014070 GO:0016128 GO:0016131 GO:0016491 GO:0033993 GO:0042221 GO:0042445 GO:0042592 GO:0044238 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901615 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

506

Amino Acids

58.03

Weight (kDa)

9.26

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	83 - 480	3.3e-85	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75130
fragaria_vesca	FvH4_2g40040 FvH4_2g40040 FvH4_2g40051
malus_domestica	MD08G1032800.v1.1 MD08G1032900.v1.1 MD08G1033000.v1.1 MD15G1029500.v1.1 MD15G1029600.v1.1
prunus_persica	Prupe.1G381900_v2.0.a1 Prupe.1G381900_v2.0.a1
pyrus_communis	pycom08g02610
rosa_chinensis	RchiOBHm_Chr6g0300691 RchiOBHm_Chr6g0300701 RchiOBHm_Chr6g0300711
rosa_laevigata	RLG00000011309 RLG00000011310 RLG00000011311
rosa_multiflora	Rmu_sc0004226.1_g000009 Rmu_sc0014374.1_g000005 Rmu_sc0014374.1_g000013 Rmu_sc0014374.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167490 Rroxscaffold_7G00167500 Rroxscaffold_7G00167510
rosa_rugosa	Rorug06G0298300 Rorug06G0298400 Rorug06G0298500 Rorug06G0298600
rosa_samantha	Rh6BG418400 Rh6BG418500 Rh6CG425900 Rh6DG411300 Rh6DG411400
rosa_wichuraiana	Rw0G002170 Rw6G035980 Rw6G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1288
Acc16I	TGCGCA	1 cut(s)	1357
Acc36I	ACCTGC	1 cut(s)	1349
AccB1I	GGYRCC	1 cut(s)	499
AccBSI	CCGCTC	1 cut(s)	484
AccII	CGCG	3 cut(s)	231, 233, 1047
AciI	CCGC	8 cut(s)	159, 169, 484, 707, 1003, 1053, 1233, 1411
AclWI	GGATC	2 cut(s)	160, 464
AcsI	RAATTY	5 cut(s)	68, 593, 663, 847, 1081
AcuI	CTGAAG	1 cut(s)	91
AfaI	GTAC	1 cut(s)	266
AfiI	CCNNNNNNNGG	5 cut(s)	90, 149, 303, 1009, 1484
AflII	CTTAAG	1 cut(s)	1094
AgsI	TTSAA	9 cut(s)	67, 368, 475, 670, 817, 843, 1087, 1282, 1382
AhlI	ACTAGT	1 cut(s)	788
AjnI	CCWGG	4 cut(s)	48, 302, 465, 727
AjuI	GAANNNNNNNTTGG	2 cut(s)	386, 418
AluBI	AGCT	7 cut(s)	188, 632, 926, 1066, 1145, 1183, 1518
AluI	AGCT	7 cut(s)	188, 632, 926, 1066, 1145, 1183, 1518
Alw21I	GWGCWC	2 cut(s)	588, 1492
Alw26I	GTCTC	3 cut(s)	766, 1050, 1437
Alw44I	GTGCAC	1 cut(s)	584
AlwI	GGATC	2 cut(s)	160, 464
Ama87I	CYCGRG	1 cut(s)	1288
AoxI	GGCC	7 cut(s)	127, 293, 421, 441, 468, 1224, 1343
ApaI	GGGCCC	2 cut(s)	131, 297
ApaLI	GTGCAC	1 cut(s)	584
ApoI	RAATTY	5 cut(s)	68, 593, 663, 847, 1081
Asp700I	GAANNNNTTC	2 cut(s)	275, 1041
AspLEI	GCGC	3 cut(s)	233, 1049, 1358
AspS9I	GGNCC	8 cut(s)	127, 128, 255, 293, 294, 441, 1189, 1343
AsuC2I	CCSGG	2 cut(s)	132, 323
AsuHPI	GGTGA	1 cut(s)	902
AsuNHI	GCTAGC	1 cut(s)	1049
AvaI	CYCGRG	1 cut(s)	1288
AvaII	GGWCC	2 cut(s)	255, 1189
BaeGI	GKGCMC	4 cut(s)	131, 297, 588, 988
BanI	GGYRCC	1 cut(s)	499
BanII	GRGCYC	2 cut(s)	131, 297
BbsI	GAAGAC	2 cut(s)	278, 861
Bbv12I	GWGCWC	2 cut(s)	588, 1492
BccI	CCATC	4 cut(s)	571, 1014, 1248, 1412
BceAI	ACGGC	1 cut(s)	156
BciT130I	CCWGG	4 cut(s)	50, 304, 467, 729
BclI	TGATCA	1 cut(s)	330
BcnI	CCSGG	2 cut(s)	132, 323
BcoDI	GTCTC	3 cut(s)	766, 1050, 1437
BcuI	ACTAGT	1 cut(s)	788
BfaI	CTAG	5 cut(s)	789, 998, 1029, 1050, 1347
BfmI	CTRYAG	1 cut(s)	1074
BfrI	CTTAAG	1 cut(s)	1094
BfuAI	ACCTGC	1 cut(s)	1349
BglI	GCCNNNNNGGC	1 cut(s)	429
Bme1390I	CCNGG	6 cut(s)	50, 132, 304, 323, 467, 729
Bme18I	GGWCC	2 cut(s)	255, 1189
BmeT110I	CYCGRG	1 cut(s)	1288
BmgT120I	GGNCC	8 cut(s)	127, 128, 255, 293, 294, 441, 1189, 1343
BmiI	GGNNCC	7 cut(s)	128, 129, 130, 295, 501, 1190, 1344
BmrFI	CCNGG	6 cut(s)	50, 132, 304, 323, 467, 729
BmsI	GCATC	5 cut(s)	13, 700, 726, 1140, 1258
BmtI	GCTAGC	1 cut(s)	1053
BoxI	GACNNNNGTC	1 cut(s)	1235
BpiI	GAAGAC	2 cut(s)	278, 861
BplI	GAGNNNNNCTC	2 cut(s)	399, 431
BpmI	CTGGAG	1 cut(s)	1125
BpuMI	CCSGG	2 cut(s)	132, 323
BsaBI	GATNNNNATC	1 cut(s)	809
BsaJI	CCNNGG	4 cut(s)	48, 86, 130, 302
Bsc4I	CCNNNNNNNGG	5 cut(s)	90, 149, 303, 1009, 1484
Bse1I	ACTGG	3 cut(s)	290, 354, 1395
Bse8I	GATNNNNATC	1 cut(s)	809
BseBI	CCWGG	4 cut(s)	50, 304, 467, 729
BseDI	CCNNGG	4 cut(s)	48, 86, 130, 302
BseGI	GGATG	3 cut(s)	586, 810, 1407
BseJI	GATNNNNATC	1 cut(s)	809
BseLI	CCNNNNNNNGG	5 cut(s)	90, 149, 303, 1009, 1484
BseMII	CTCAG	1 cut(s)	868
BseNI	ACTGG	3 cut(s)	290, 354, 1395
BseRI	GAGGAG	2 cut(s)	570, 665
BseSI	GKGCMC	4 cut(s)	131, 297, 588, 988
Bsh1236I	CGCG	3 cut(s)	231, 233, 1047
BshFI	GGCC	7 cut(s)	129, 295, 423, 443, 470, 1226, 1345
BshNI	GGYRCC	1 cut(s)	499
BsiHKAI	GWGCWC	2 cut(s)	588, 1492
BsiHKCI	CYCGRG	1 cut(s)	1288
BsiSI	CCGG	2 cut(s)	132, 323
BslFI	GGGAC	3 cut(s)	188, 807, 1202
BslI	CCNNNNNNNGG	5 cut(s)	90, 149, 303, 1009, 1484
BsmAI	GTCTC	3 cut(s)	766, 1050, 1437
BsmFI	GGGAC	3 cut(s)	188, 807, 1202
BsmI	GAATGC	1 cut(s)	935
BsnI	GGCC	7 cut(s)	129, 295, 423, 443, 470, 1226, 1345
BsoBI	CYCGRG	1 cut(s)	1288
Bsp120I	GGGCCC	2 cut(s)	127, 293
Bsp1286I	GDGCHC	5 cut(s)	131, 297, 588, 988, 1492
Bsp143I	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
Bsp19I	CCATGG	1 cut(s)	86
BspACI	CCGC	8 cut(s)	159, 169, 484, 707, 1003, 1053, 1233, 1411
BspANI	GGCC	7 cut(s)	129, 295, 423, 443, 470, 1226, 1345
BspCNI	CTCAG	1 cut(s)	867
BspFNI	CGCG	3 cut(s)	231, 233, 1047
BspHI	TCATGA	1 cut(s)	598
BspLI	GGNNCC	7 cut(s)	128, 129, 130, 295, 501, 1190, 1344
BspMAI	CTGCAG	1 cut(s)	1078
BspMI	ACCTGC	1 cut(s)	1349
BspOI	GCTAGC	1 cut(s)	1053
BspPI	GGATC	2 cut(s)	160, 464
BspT107I	GGYRCC	1 cut(s)	499
BspTI	CTTAAG	1 cut(s)	1094
BsrBI	CCGCTC	1 cut(s)	484
BsrI	ACTGG	3 cut(s)	290, 354, 1395
BssECI	CCNNGG	4 cut(s)	48, 86, 130, 302
BssMI	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
BssT1I	CCWWGG	1 cut(s)	86
Bst2UI	CCWGG	4 cut(s)	50, 304, 467, 729
Bst4CI	ACNGT	1 cut(s)	140
Bst6I	CTCTTC	2 cut(s)	68, 407
BstAFI	CTTAAG	1 cut(s)	1094
BstC8I	GCNNGC	3 cut(s)	309, 1003, 1051
BstDEI	CTNAG	4 cut(s)	702, 854, 1127, 1396
BstDSI	CCRYGG	1 cut(s)	86
BstF5I	GGATG	3 cut(s)	586, 810, 1407
BstFNI	CGCG	3 cut(s)	231, 233, 1047
BstHHI	GCGC	3 cut(s)	233, 1049, 1358
BstKTI	GATC	7 cut(s)	147, 168, 333, 459, 604, 813, 1093
BstMAI	GTCTC	3 cut(s)	766, 1050, 1437
BstMBI	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
BstMWI	GCNNNNNNNGC	6 cut(s)	126, 230, 429, 1159, 1232, 1309
BstNI	CCWGG	4 cut(s)	50, 304, 467, 729
BstNSI	RCATGY	1 cut(s)	265
BstPAI	GACNNNNGTC	1 cut(s)	1235
BstSCI	CCNGG	6 cut(s)	48, 130, 302, 321, 465, 727
BstSFI	CTRYAG	1 cut(s)	1074
BstSLI	GKGCMC	4 cut(s)	131, 297, 588, 988
BstUI	CGCG	3 cut(s)	231, 233, 1047
BstV2I	GAAGAC	2 cut(s)	278, 861
BstX2I	RGATCY	1 cut(s)	165
BstYI	RGATCY	1 cut(s)	165
BsuRI	GGCC	7 cut(s)	129, 295, 423, 443, 470, 1226, 1345
BtgI	CCRYGG	1 cut(s)	86
BtgZI	GCGATG	2 cut(s)	205, 447
BtsCI	GGATG	3 cut(s)	586, 810, 1407
BtsIMutI	CAGTG	2 cut(s)	361, 1248
BveI	ACCTGC	1 cut(s)	1349
Cac8I	GCNNGC	3 cut(s)	309, 1003, 1051
CciI	TCATGA	1 cut(s)	598
CfoI	GCGC	3 cut(s)	233, 1049, 1358
Cfr13I	GGNCC	8 cut(s)	127, 128, 255, 293, 294, 441, 1189, 1343
CseI	GACGC	1 cut(s)	103
Csp6I	GTAC	1 cut(s)	265
CspCI	CAANNNNNGTGG	2 cut(s)	337, 372
CviAII	CATG	5 cut(s)	87, 262, 523, 599, 1448
CviQI	GTAC	1 cut(s)	265
DdeI	CTNAG	4 cut(s)	702, 854, 1127, 1396
DpnI	GATC	7 cut(s)	146, 167, 332, 458, 603, 812, 1092
DpnII	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
Eam1104I	CTCTTC	2 cut(s)	68, 407
EarI	CTCTTC	2 cut(s)	68, 407
EciI	GGCGGA	3 cut(s)	148, 158, 1400
Eco130I	CCWWGG	1 cut(s)	86
Eco147I	AGGCCT	2 cut(s)	423, 470
Eco24I	GRGCYC	2 cut(s)	131, 297
Eco47I	GGWCC	2 cut(s)	255, 1189
Eco57I	CTGAAG	1 cut(s)	91
Eco88I	CYCGRG	1 cut(s)	1288
EcoO109I	RGGNCCY	4 cut(s)	127, 128, 1189, 1343
EcoRII	CCWGG	4 cut(s)	48, 302, 465, 727
EcoT14I	CCWWGG	1 cut(s)	86
EcoT22I	ATGCAT	2 cut(s)	6, 693
EcoT38I	GRGCYC	2 cut(s)	131, 297
ErhI	CCWWGG	1 cut(s)	86
FaeI	CATG	5 cut(s)	90, 265, 526, 602, 1451
FalI	AAGNNNNNCTT	4 cut(s)	327, 359, 362, 394
FaqI	GGGAC	3 cut(s)	188, 807, 1202
FatI	CATG	5 cut(s)	86, 261, 522, 598, 1447
FauI	CCCGC	2 cut(s)	477, 1010
FauNDI	CATATG	1 cut(s)	1256
FbaI	TGATCA	1 cut(s)	330
FokI	GGATG	3 cut(s)	593, 817, 1394
FriOI	GRGCYC	2 cut(s)	131, 297
FspBI	CTAG	5 cut(s)	789, 998, 1029, 1050, 1347
FspI	TGCGCA	1 cut(s)	1357
GlaI	GCGC	3 cut(s)	232, 1048, 1357
GsuI	CTGGAG	1 cut(s)	1125
HaeIII	GGCC	7 cut(s)	129, 295, 423, 443, 470, 1226, 1345
HapII	CCGG	2 cut(s)	132, 323
HgaI	GACGC	1 cut(s)	103
HhaI	GCGC	3 cut(s)	233, 1049, 1358
Hin1II	CATG	5 cut(s)	90, 265, 526, 602, 1451
Hin6I	GCGC	3 cut(s)	231, 1047, 1356
HinP1I	GCGC	3 cut(s)	231, 1047, 1356
HincII	GTYRAC	2 cut(s)	463, 1117
HindII	GTYRAC	2 cut(s)	463, 1117
HindIII	AAGCTT	2 cut(s)	1064, 1181
HpaI	GTTAAC	1 cut(s)	1117
HpaII	CCGG	2 cut(s)	132, 323
HphI	GGTGA	1 cut(s)	902
Hpy166II	GTNNAC	4 cut(s)	463, 586, 1117, 1472
Hpy188I	TCNGA	6 cut(s)	110, 144, 152, 319, 407, 1300
Hpy188III	TCNNGA	5 cut(s)	599, 624, 814, 1010, 1244
Hpy8I	GTNNAC	4 cut(s)	463, 586, 1117, 1472
HpyCH4III	ACNGT	1 cut(s)	140
HpyCH4V	TGCA	8 cut(s)	4, 586, 676, 691, 933, 950, 1076, 1451
HpyF10VI	GCNNNNNNNGC	6 cut(s)	126, 230, 429, 1159, 1232, 1309
HpyF3I	CTNAG	4 cut(s)	702, 854, 1127, 1396
Hsp92II	CATG	5 cut(s)	90, 265, 526, 602, 1451
HspAI	GCGC	3 cut(s)	231, 1047, 1356
Ksp22I	TGATCA	1 cut(s)	330
KspAI	GTTAAC	1 cut(s)	1117
Kzo9I	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
LmnI	GCTCC	3 cut(s)	229, 481, 714
LweI	GCATC	5 cut(s)	13, 700, 726, 1140, 1258
MaeI	CTAG	5 cut(s)	789, 998, 1029, 1050, 1347
MalI	GATC	7 cut(s)	146, 167, 332, 458, 603, 812, 1092
MbiI	CCGCTC	1 cut(s)	484
MboI	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
MflI	RGATCY	1 cut(s)	165
MhlI	GDGCHC	5 cut(s)	131, 297, 588, 988, 1492
MluCI	AATT	8 cut(s)	68, 349, 507, 593, 663, 847, 902, 1081
MlyI	GAGTC	3 cut(s)	210, 408, 1125
MmeI	TCCRAC	4 cut(s)	342, 513, 891, 1460
Mph1103I	ATGCAT	2 cut(s)	6, 693
MroXI	GAANNNNTTC	2 cut(s)	275, 1041
MseI	TTAA	5 cut(s)	389, 863, 1095, 1116, 1179
MslI	CAYNNNNRTG	1 cut(s)	527
MspA1I	CMGCKG	2 cut(s)	1145, 1235
MspCI	CTTAAG	1 cut(s)	1094
MspI	CCGG	2 cut(s)	132, 323
MspR9I	CCNGG	6 cut(s)	50, 132, 304, 323, 467, 729
Mva1269I	GAATGC	1 cut(s)	935
MvaI	CCWGG	4 cut(s)	50, 304, 467, 729
MvnI	CGCG	3 cut(s)	231, 233, 1047
MwoI	GCNNNNNNNGC	6 cut(s)	126, 230, 429, 1159, 1232, 1309
NciI	CCSGG	2 cut(s)	132, 323
NcoI	CCATGG	1 cut(s)	86
NdeI	CATATG	1 cut(s)	1256
NdeII	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
NheI	GCTAGC	1 cut(s)	1049
NlaIII	CATG	5 cut(s)	90, 265, 526, 602, 1451
NlaIV	GGNNCC	7 cut(s)	128, 129, 130, 295, 501, 1190, 1344
NmeAIII	GCCGAG	1 cut(s)	187
NsbI	TGCGCA	1 cut(s)	1357
NsiI	ATGCAT	2 cut(s)	6, 693
NspI	RCATGY	1 cut(s)	265
PaeR7I	CTCGAG	1 cut(s)	1288
PagI	TCATGA	1 cut(s)	598
PceI	AGGCCT	2 cut(s)	423, 470
PcsI	WCGNNNNNNNCGW	1 cut(s)	423
PctI	GAATGC	1 cut(s)	935
PdmI	GAANNNNTTC	2 cut(s)	275, 1041
PfeI	GAWTC	7 cut(s)	235, 732, 794, 839, 1042, 1350, 1510
PfoI	TCCNGGA	1 cut(s)	727
PleI	GAGTC	3 cut(s)	209, 408, 1125
PpsI	GAGTC	3 cut(s)	209, 408, 1125
PpuMI	RGGWCCY	1 cut(s)	1189
PshAI	GACNNNNGTC	1 cut(s)	1235
Psp5II	RGGWCCY	1 cut(s)	1189
Psp6I	CCWGG	4 cut(s)	48, 302, 465, 727
PspGI	CCWGG	4 cut(s)	48, 302, 465, 727
PspN4I	GGNNCC	7 cut(s)	128, 129, 130, 295, 501, 1190, 1344
PspOMI	GGGCCC	2 cut(s)	127, 293
PspPI	GGNCC	8 cut(s)	127, 128, 255, 293, 294, 441, 1189, 1343
PspPPI	RGGWCCY	1 cut(s)	1189
PspXI	VCTCGAGB	1 cut(s)	1288
PstI	CTGCAG	1 cut(s)	1078
PsuI	RGATCY	1 cut(s)	165
PvuII	CAGCTG	1 cut(s)	1145
RsaI	GTAC	1 cut(s)	266
RsaNI	GTAC	1 cut(s)	265
RseI	CAYNNNNRTG	1 cut(s)	527
SaqAI	TTAA	5 cut(s)	389, 863, 1095, 1116, 1179
Sau3AI	GATC	7 cut(s)	144, 165, 330, 456, 601, 810, 1090
Sau96I	GGNCC	8 cut(s)	127, 128, 255, 293, 294, 441, 1189, 1343
SchI	GAGTC	3 cut(s)	210, 408, 1125
ScrFI	CCNGG	6 cut(s)	50, 132, 304, 323, 467, 729
SduI	GDGCHC	5 cut(s)	131, 297, 588, 988, 1492
SfaNI	GCATC	5 cut(s)	13, 700, 726, 1140, 1258
SfcI	CTRYAG	1 cut(s)	1074
Sfr274I	CTCGAG	1 cut(s)	1288
SinI	GGWCC	2 cut(s)	255, 1189
SlaI	CTCGAG	1 cut(s)	1288
SmiMI	CAYNNNNRTG	1 cut(s)	527
SmlI	CTYRAG	2 cut(s)	1094, 1288
SmoI	CTYRAG	2 cut(s)	1094, 1288
SpeI	ACTAGT	1 cut(s)	788
Sse9I	AATT	8 cut(s)	68, 349, 507, 593, 663, 847, 902, 1081
SseBI	AGGCCT	2 cut(s)	423, 470
SsiI	CCGC	8 cut(s)	159, 169, 484, 707, 1003, 1053, 1233, 1411
SspMI	CTAG	5 cut(s)	789, 998, 1029, 1050, 1347
StuI	AGGCCT	2 cut(s)	423, 470
StyD4I	CCNGG	6 cut(s)	48, 130, 302, 321, 465, 727
StyI	CCWWGG	1 cut(s)	86
TaaI	ACNGT	1 cut(s)	140
TaqI	TCGA	5 cut(s)	210, 426, 623, 1289, 1306
TasI	AATT	8 cut(s)	68, 349, 507, 593, 663, 847, 902, 1081
TfiI	GAWTC	7 cut(s)	235, 732, 794, 839, 1042, 1350, 1510
Tru1I	TTAA	5 cut(s)	389, 863, 1095, 1116, 1179
Tru9I	TTAA	5 cut(s)	389, 863, 1095, 1116, 1179
TscAI	CASTG	2 cut(s)	361, 1255
TspDTI	ATGAA	4 cut(s)	29, 437, 539, 587
TspGWI	ACGGA	1 cut(s)	817
TspRI	CASTG	2 cut(s)	361, 1255
Vha464I	CTTAAG	1 cut(s)	1094
VneI	GTGCAC	1 cut(s)	584
VpaK11BI	GGWCC	2 cut(s)	255, 1189
XapI	RAATTY	5 cut(s)	68, 593, 663, 847, 1081
XceI	RCATGY	1 cut(s)	265
XcmI	CCANNNNNNNNNTGG	2 cut(s)	304, 529
XhoI	CTCGAG	1 cut(s)	1288
XmnI	GAANNNNTTC	2 cut(s)	275, 1041
XspI	CTAG	5 cut(s)	789, 998, 1029, 1050, 1347
Zsp2I	ATGCAT	2 cut(s)	6, 693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.