Rmu_sc0014374.1_g000013

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014374.1
Physical Location & Seq
Reverse (-)
30404 .. 33897
3494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014374.1_g000013.1.cds

Sequence Viewer

Length: 1593 bp
atgcatcttcttctgctttttgttcttcctcttattttcatcttgaaatttgtctactccacaatattggttccgtggaggacacgaaaccacttcctcaagcaaggcattgatggacctgcctaccgtccgatcatcggcaactcgtccgagatccgccttatgttcaaagaagctctgtcaaagcgagtcccttttgaccacaacgtactcggacgcacgcttccattttaccctagctggtccaaagtgtacgggaagaacttcttgtactggttcgggtcaaagcccaggctggctatagccgacccggaaatgatcaaacaagtccttatcaataccagtggatcgtttcaaagagtacctttaactccttcctctagggttctctttggagatggacttcctgcgctcgaaggtgaaagatgggctttccatagaaaaattgtaaaccaagccttcaaaatggagcgagtcgaggattgggtgccacaaattgtggacattaccatgaagatgatggaggagtgggaggatataaggggaggaagagatgagtttgaaatggaggtacacaagcaaatgcatgaggtatcagcagatgttatgtccagaacagttttcggaagcagttttgaagagggaaagcgtattttcaacttgcaaaaacagcaaatgcatcttttccttaaggcagttcagagcatctatattcctggattcagatttttgcctaccaaggataacagagagaggtggagactaaataaggaaatctgtgaatcaatacggatgttgattgcgaataatagcaaaaacctagaggaatcaaaagttctgctgagtctattaatgtcttctcacaagaatctggatggaatagaggaaaaactagggctacaggaaattatagaagaatgcaaggccttctactttgttggcaaggaaacaattgctaatcttttgacttggtcacttatccttctggcgcggcatcaggaatggcaaagcaaggctagagaagaagtgattattttcttttgtggtccttgtggacacaataagcatccagtcgaagagaatttgaacgacctcaggattgtaagcatgataattaacgaagcacttagactctatcctcctggtgtgctactaaataggcaaacatcaaagaagcttaagcttgggagcctggaaattccttctgacacacaactagtcgtgcccttgattgctgttcatcacgacactgatatatggggtaaagatgctaatgaattcaatccatcaaggttcttggagcctcgaaggcatttagcctcgtttcttccatttggtttagggaccagatactgccccggtcagaatttagcactcgttgaagcaaaactggtgttagcaatcatcgtcagacactattctttcacgggattgattccaaaacaacaggaaagtctgaagaaactgaaggcaaaacatggcaaagtacaattgggcactatcactgttgatatggtgattgatggaataaggggaatgacggggttgctgtggagaccactttacttgatccagacaagggcattcgcttag

Protein Analysis

530

Amino Acids

61.19

Weight (kDa)

9.4

Isoelectric Point (pI)

47.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 127
AccB1I GGYRCC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 54
AccII CGCG 1 cut(s) 991
AciI CCGC 2 cut(s) 157, 991
AclWI GGATC 3 cut(s) 148, 355, 1564
AcsI RAATTY 5 cut(s) 47, 1081, 1197, 1277, 1366
AcuI CTGAAG 2 cut(s) 1478, 1487
AfaI GTAC 6 cut(s) 210, 254, 272, 363, 573, 1488
AfiI CCNNNNNNNGG 2 cut(s) 137, 1579
AflII CTTAAG 2 cut(s) 689, 1178
AhlI ACTAGT 1 cut(s) 1216
AjnI CCWGG 4 cut(s) 290, 715, 1141, 1191
AluBI AGCT 4 cut(s) 176, 240, 1177, 1183
AluI AGCT 4 cut(s) 176, 240, 1177, 1183
Alw26I GTCTC 2 cut(s) 754, 1549
AlwI GGATC 3 cut(s) 148, 355, 1564
AlwNI CAGNNNCTG 1 cut(s) 1353
AoxI GGCC 1 cut(s) 924
ApoI RAATTY 5 cut(s) 47, 1081, 1197, 1277, 1366
AseI ATTAAT 1 cut(s) 851
Asp700I GAANNNNTTC 1 cut(s) 263
AspLEI GCGC 2 cut(s) 412, 991
AspS9I GGNCC 4 cut(s) 116, 243, 1046, 1344
AsuC2I CCSGG 2 cut(s) 311, 1359
AsuHPI GGTGA 2 cut(s) 431, 1528
AvaII GGWCC 4 cut(s) 116, 243, 1046, 1344
AxyI CCTNAGG 1 cut(s) 1094
BaeGI GKGCMC 2 cut(s) 1227, 1499
BanI GGYRCC 1 cut(s) 487
BbsI GAAGAC 1 cut(s) 849
BccI CCATC 7 cut(s) 107, 392, 420, 514, 869, 1294, 1517
BciT130I CCWGG 4 cut(s) 292, 717, 1143, 1193
BclI TGATCA 1 cut(s) 318
BcnI CCSGG 2 cut(s) 311, 1359
BcoDI GTCTC 2 cut(s) 754, 1549
BcuI ACTAGT 1 cut(s) 1216
BfaI CTAG 6 cut(s) 237, 381, 821, 893, 1017, 1217
BfmI CTRYAG 2 cut(s) 300, 899
BfrI CTTAAG 2 cut(s) 689, 1178
BfuAI ACCTGC 1 cut(s) 127
BglI GCCNNNNNGGC 1 cut(s) 1309
BisI GCNGC 1 cut(s) 992
BlsI GCNGC 1 cut(s) 993
Bme1390I CCNGG 6 cut(s) 292, 311, 717, 1143, 1193, 1359
Bme18I GGWCC 4 cut(s) 116, 243, 1046, 1344
BmgT120I GGNCC 4 cut(s) 116, 243, 1046, 1344
BmiI GGNNCC 5 cut(s) 72, 489, 1190, 1302, 1345
BmrFI CCNGG 6 cut(s) 292, 311, 717, 1143, 1193, 1359
BmsI GCATC 6 cut(s) 13, 688, 714, 1003, 1075, 1258
BpiI GAAGAC 1 cut(s) 849
BpuEI CTTGAG 1 cut(s) 83
BpuMI CCSGG 2 cut(s) 311, 1359
BsaI GGTCTC 1 cut(s) 1549
BsaJI CCNNGG 4 cut(s) 74, 290, 738, 1357
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 1579
Bse1I ACTGG 4 cut(s) 278, 342, 1070, 1395
Bse21I CCTNAGG 1 cut(s) 1094
BseBI CCWGG 4 cut(s) 292, 717, 1143, 1193
BseDI CCNNGG 4 cut(s) 74, 290, 738, 1357
BseGI GGATG 3 cut(s) 798, 880, 1066
BseLI CCNNNNNNNGG 2 cut(s) 137, 1579
BseMII CTCAG 2 cut(s) 833, 1108
BseNI ACTGG 4 cut(s) 278, 342, 1070, 1395
BseRI GAGGAG 1 cut(s) 539
BseSI GKGCMC 2 cut(s) 1227, 1499
Bsh1236I CGCG 1 cut(s) 991
BshFI GGCC 1 cut(s) 926
BshNI GGYRCC 1 cut(s) 487
BsiSI CCGG 2 cut(s) 311, 1359
BslFI GGGAC 2 cut(s) 176, 1357
BslI CCNNNNNNNGG 2 cut(s) 137, 1579
BsmAI GTCTC 2 cut(s) 754, 1549
BsmFI GGGAC 2 cut(s) 176, 1357
BsmI GAATGC 2 cut(s) 923, 1583
BsnI GGCC 1 cut(s) 926
Bso31I GGTCTC 1 cut(s) 1549
Bsp1286I GDGCHC 2 cut(s) 1227, 1499
Bsp143I GATC 5 cut(s) 132, 153, 318, 347, 1569
BspACI CCGC 2 cut(s) 157, 991
BspANI GGCC 1 cut(s) 926
BspCNI CTCAG 2 cut(s) 834, 1107
BspFNI CGCG 1 cut(s) 991
BspLI GGNNCC 5 cut(s) 72, 489, 1190, 1302, 1345
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 3 cut(s) 148, 355, 1564
BspT107I GGYRCC 1 cut(s) 487
BspTI CTTAAG 2 cut(s) 689, 1178
BspTNI GGTCTC 1 cut(s) 1549
BsrI ACTGG 4 cut(s) 278, 342, 1070, 1395
BssECI CCNNGG 4 cut(s) 74, 290, 738, 1357
BssMI GATC 5 cut(s) 132, 153, 318, 347, 1569
BssT1I CCWWGG 1 cut(s) 738
Bst2UI CCWGG 4 cut(s) 292, 717, 1143, 1193
Bst4CI ACNGT 3 cut(s) 128, 619, 1507
Bst6I CTCTTC 3 cut(s) 544, 633, 1071
BstAFI CTTAAG 2 cut(s) 689, 1178
BstC8I GCNNGC 2 cut(s) 221, 297
BstDEI CTNAG 4 cut(s) 842, 1094, 1127, 1590
BstDSI CCRYGG 1 cut(s) 74
BstF5I GGATG 3 cut(s) 798, 880, 1066
BstFNI CGCG 1 cut(s) 991
BstHHI GCGC 2 cut(s) 412, 991
BstKTI GATC 5 cut(s) 135, 156, 321, 350, 1572
BstMAI GTCTC 2 cut(s) 754, 1549
BstMBI GATC 5 cut(s) 132, 153, 318, 347, 1569
BstMWI GCNNNNNNNGC 2 cut(s) 670, 1309
BstNI CCWGG 4 cut(s) 292, 717, 1143, 1193
BstSCI CCNGG 6 cut(s) 290, 309, 715, 1141, 1191, 1357
BstSFI CTRYAG 2 cut(s) 300, 899
BstSLI GKGCMC 2 cut(s) 1227, 1499
BstUI CGCG 1 cut(s) 991
BstV2I GAAGAC 1 cut(s) 849
BstX2I RGATCY 1 cut(s) 153
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 1 cut(s) 153
Bsu36I CCTNAGG 1 cut(s) 1094
BsuRI GGCC 1 cut(s) 926
BtgI CCRYGG 1 cut(s) 74
BtsCI GGATG 3 cut(s) 798, 880, 1066
BtsIMutI CAGTG 3 cut(s) 349, 1248, 1503
BveI ACCTGC 1 cut(s) 127
Cac8I GCNNGC 2 cut(s) 221, 297
CaiI CAGNNNCTG 1 cut(s) 1353
CfoI GCGC 2 cut(s) 412, 991
Cfr13I GGNCC 4 cut(s) 116, 243, 1046, 1344
CseI GACGC 1 cut(s) 225
Csp6I GTAC 6 cut(s) 209, 253, 271, 362, 572, 1487
CspCI CAANNNNNGTGG 4 cut(s) 325, 360, 1548, 1583
CviAII CATG 4 cut(s) 511, 587, 1108, 1478
CviQI GTAC 6 cut(s) 209, 253, 271, 362, 572, 1487
DdeI CTNAG 4 cut(s) 842, 1094, 1127, 1590
DpnI GATC 5 cut(s) 134, 155, 320, 349, 1571
DpnII GATC 5 cut(s) 132, 153, 318, 347, 1569
Eam1104I CTCTTC 3 cut(s) 544, 633, 1071
EarI CTCTTC 3 cut(s) 544, 633, 1071
EciI GGCGGA 1 cut(s) 146
Eco130I CCWWGG 1 cut(s) 738
Eco147I AGGCCT 1 cut(s) 926
Eco31I GGTCTC 1 cut(s) 1549
Eco47I GGWCC 4 cut(s) 116, 243, 1046, 1344
Eco57I CTGAAG 2 cut(s) 1478, 1487
Eco81I CCTNAGG 1 cut(s) 1094
EcoRI GAATTC 1 cut(s) 1277
EcoRII CCWGG 4 cut(s) 290, 715, 1141, 1191
EcoT14I CCWWGG 1 cut(s) 738
EcoT22I ATGCAT 3 cut(s) 6, 588, 681
ErhI CCWWGG 1 cut(s) 738
FaeI CATG 4 cut(s) 514, 590, 1111, 1481
FalI AAGNNNNNCTT 6 cut(s) 251, 283, 349, 381, 415, 447
FaqI GGGAC 2 cut(s) 176, 1357
FatI CATG 4 cut(s) 510, 586, 1107, 1477
FbaI TGATCA 1 cut(s) 318
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 1 cut(s) 992
FokI GGATG 3 cut(s) 805, 887, 1053
Fsp4HI GCNGC 1 cut(s) 992
FspBI CTAG 6 cut(s) 237, 381, 821, 893, 1017, 1217
GlaI GCGC 2 cut(s) 411, 990
GluI GCNGC 1 cut(s) 992
HaeIII GGCC 1 cut(s) 926
HapII CCGG 2 cut(s) 311, 1359
HgaI GACGC 1 cut(s) 225
HhaI GCGC 2 cut(s) 412, 991
Hin1II CATG 4 cut(s) 514, 590, 1111, 1481
Hin6I GCGC 2 cut(s) 410, 989
HinP1I GCGC 2 cut(s) 410, 989
HindIII AAGCTT 2 cut(s) 1175, 1181
HinfI GANTC 9 cut(s) 189, 474, 720, 782, 827, 844, 868, 1131, 1435
HpaII CCGG 2 cut(s) 311, 1359
HphI GGTGA 2 cut(s) 431, 1528
Hpy166II GTNNAC 6 cut(s) 55, 253, 451, 502, 574, 1055
Hpy188III TCNNGA 7 cut(s) 43, 612, 872, 998, 1096, 1244, 1573
Hpy8I GTNNAC 6 cut(s) 55, 253, 451, 502, 574, 1055
HpyAV CCTTC 8 cut(s) 384, 410, 469, 937, 992, 1212, 1302, 1462
HpyCH4III ACNGT 3 cut(s) 128, 619, 1507
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 5 cut(s) 4, 586, 664, 679, 921
HpyF10VI GCNNNNNNNGC 2 cut(s) 670, 1309
HpyF3I CTNAG 4 cut(s) 842, 1094, 1127, 1590
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 4 cut(s) 514, 590, 1111, 1481
HspAI GCGC 2 cut(s) 410, 989
Ksp22I TGATCA 1 cut(s) 318
Kzo9I GATC 5 cut(s) 132, 153, 318, 347, 1569
LmnI GCTCC 3 cut(s) 469, 1188, 1300
LweI GCATC 6 cut(s) 13, 688, 714, 1003, 1075, 1258
MaeI CTAG 6 cut(s) 237, 381, 821, 893, 1017, 1217
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 972
MalI GATC 5 cut(s) 134, 155, 320, 349, 1571
MboI GATC 5 cut(s) 132, 153, 318, 347, 1569
MfeI CAATTG 2 cut(s) 951, 1490
MflI RGATCY 1 cut(s) 153
MhlI GDGCHC 2 cut(s) 1227, 1499
MlyI GAGTC 4 cut(s) 198, 483, 853, 1125
Mph1103I ATGCAT 3 cut(s) 6, 588, 681
MroXI GAANNNNTTC 1 cut(s) 263
MseI TTAA 5 cut(s) 368, 690, 851, 1116, 1179
MslI CAYNNNNRTG 2 cut(s) 509, 515
MspCI CTTAAG 2 cut(s) 689, 1178
MspI CCGG 2 cut(s) 311, 1359
MspR9I CCNGG 6 cut(s) 292, 311, 717, 1143, 1193, 1359
MunI CAATTG 2 cut(s) 951, 1490
Mva1269I GAATGC 2 cut(s) 923, 1583
MvaI CCWGG 4 cut(s) 292, 717, 1143, 1193
MvnI CGCG 1 cut(s) 991
MwoI GCNNNNNNNGC 2 cut(s) 670, 1309
NciI CCSGG 2 cut(s) 311, 1359
NdeII GATC 5 cut(s) 132, 153, 318, 347, 1569
NlaIII CATG 4 cut(s) 514, 590, 1111, 1481
NlaIV GGNNCC 5 cut(s) 72, 489, 1190, 1302, 1345
NmuCI GTSAC 1 cut(s) 972
NsiI ATGCAT 3 cut(s) 6, 588, 681
PceI AGGCCT 1 cut(s) 926
PctI GAATGC 2 cut(s) 923, 1583
PdmI GAANNNNTTC 1 cut(s) 263
PfeI GAWTC 5 cut(s) 720, 782, 827, 868, 1435
PflFI GACNNNGTC 1 cut(s) 970
PfoI TCCNGGA 1 cut(s) 715
PkrI GCNGC 1 cut(s) 993
PleI GAGTC 4 cut(s) 197, 482, 852, 1125
PpsI GAGTC 4 cut(s) 197, 482, 852, 1125
PshBI ATTAAT 1 cut(s) 851
Psp6I CCWGG 4 cut(s) 290, 715, 1141, 1191
PspGI CCWGG 4 cut(s) 290, 715, 1141, 1191
PspN4I GGNNCC 5 cut(s) 72, 489, 1190, 1302, 1345
PspPI GGNCC 4 cut(s) 116, 243, 1046, 1344
PsrI GAACNNNNNNTAC 2 cut(s) 254, 286
PstNI CAGNNNCTG 1 cut(s) 1353
PsuI RGATCY 1 cut(s) 153
PsyI GACNNNGTC 1 cut(s) 970
RsaI GTAC 6 cut(s) 210, 254, 272, 363, 573, 1488
RsaNI GTAC 6 cut(s) 209, 253, 271, 362, 572, 1487
RseI CAYNNNNRTG 2 cut(s) 509, 515
SaqAI TTAA 5 cut(s) 368, 690, 851, 1116, 1179
SatI GCNGC 1 cut(s) 992
Sau3AI GATC 5 cut(s) 132, 153, 318, 347, 1569
Sau96I GGNCC 4 cut(s) 116, 243, 1046, 1344
SchI GAGTC 4 cut(s) 198, 483, 853, 1125
ScrFI CCNGG 6 cut(s) 292, 311, 717, 1143, 1193, 1359
SduI GDGCHC 2 cut(s) 1227, 1499
SfaNI GCATC 6 cut(s) 13, 688, 714, 1003, 1075, 1258
SfcI CTRYAG 2 cut(s) 300, 899
SinI GGWCC 4 cut(s) 116, 243, 1046, 1344
SmiMI CAYNNNNRTG 2 cut(s) 509, 515
SmlI CTYRAG 3 cut(s) 98, 689, 1178
SmoI CTYRAG 3 cut(s) 98, 689, 1178
SpeI ACTAGT 1 cut(s) 1216
SseBI AGGCCT 1 cut(s) 926
SsiI CCGC 2 cut(s) 157, 991
SspI AATATT 1 cut(s) 66
SspMI CTAG 6 cut(s) 237, 381, 821, 893, 1017, 1217
StuI AGGCCT 1 cut(s) 926
StyD4I CCNGG 6 cut(s) 290, 309, 715, 1141, 1191, 1357
StyI CCWWGG 1 cut(s) 738
TaaI ACNGT 3 cut(s) 128, 619, 1507
TaiI ACGT 1 cut(s) 210
TaqI TCGA 4 cut(s) 414, 477, 1074, 1306
TatI WGTACW 2 cut(s) 270, 1486
TauI GCSGC 1 cut(s) 994
TfiI GAWTC 5 cut(s) 720, 782, 827, 868, 1435
Tru1I TTAA 5 cut(s) 368, 690, 851, 1116, 1179
Tru9I TTAA 5 cut(s) 368, 690, 851, 1116, 1179
TscAI CASTG 3 cut(s) 349, 1255, 1510
TseFI GTSAC 1 cut(s) 972
Tsp45I GTSAC 1 cut(s) 972
TspDTI ATGAA 4 cut(s) 28, 527, 1229, 1290
TspGWI ACGGA 2 cut(s) 63, 805
TspRI CASTG 3 cut(s) 349, 1255, 1510
Tth111I GACNNNGTC 1 cut(s) 970
Vha464I CTTAAG 2 cut(s) 689, 1178
VpaK11BI GGWCC 4 cut(s) 116, 243, 1046, 1344
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 5 cut(s) 47, 1081, 1197, 1277, 1366
XcmI CCANNNNNNNNNTGG 1 cut(s) 517
XmiI GTMKAC 1 cut(s) 54
XmnI GAANNNNTTC 1 cut(s) 263
XspI CTAG 6 cut(s) 237, 381, 821, 893, 1017, 1217
Zsp2I ATGCAT 3 cut(s) 6, 588, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.