Rorug06G0298600

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
45127936 .. 45128771
836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0298600.1

Sequence Viewer

Length: 243 bp
ATGTCATCTTCAAGAATTGTTCTTTGCATCTTCTTGTCGCTGATCGCCACCAGTCTCCTTCTACAGACAGAAGCGACCTTTAACCCATCATCTCTTGCTGAAGTACCACCACCAGGGACTGTTTTTGGGTGCAACGTCCTGGCCCGTGCCAAACAAAATGTTGCCTGTGCACTGTGGTTCGGACAAGGCCAATCTGTGCAAGATGCTGTGAAGAAGATGATGGGACACAACCAGGAGGTTTAG

Protein Analysis

80

Amino Acids

8.55

Weight (kDa)

7.74

Isoelectric Point (pI)

67.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 120
AfaI GTAC 1 cut(s) 105
AfiI CCNNNNNNNGG 1 cut(s) 113
AgsI TTSAA 1 cut(s) 12
AjnI CCWGG 3 cut(s) 112, 138, 231
Alw21I GWGCWC 1 cut(s) 172
Alw26I GTCTC 1 cut(s) 59
Alw44I GTGCAC 1 cut(s) 168
AlwNI CAGNNNCTG 1 cut(s) 119
AoxI GGCC 2 cut(s) 141, 187
ApaLI GTGCAC 1 cut(s) 168
AspS9I GGNCC 1 cut(s) 142
BaeGI GKGCMC 1 cut(s) 172
Bbv12I GWGCWC 1 cut(s) 172
BccI CCATC 2 cut(s) 94, 214
BciT130I CCWGG 3 cut(s) 114, 140, 233
BcoDI GTCTC 1 cut(s) 59
BfmI CTRYAG 1 cut(s) 62
Bme1390I CCNGG 3 cut(s) 114, 140, 233
BmgT120I GGNCC 1 cut(s) 142
BmrFI CCNGG 3 cut(s) 114, 140, 233
BmsI GCATC 2 cut(s) 36, 193
BsaJI CCNNGG 1 cut(s) 113
Bsc4I CCNNNNNNNGG 1 cut(s) 113
Bse1I ACTGG 1 cut(s) 51
BseBI CCWGG 3 cut(s) 114, 140, 233
BseDI CCNNGG 1 cut(s) 113
BseLI CCNNNNNNNGG 1 cut(s) 113
BseNI ACTGG 1 cut(s) 51
BseSI GKGCMC 1 cut(s) 172
BshFI GGCC 2 cut(s) 143, 189
BsiHKAI GWGCWC 1 cut(s) 172
BslFI GGGAC 2 cut(s) 130, 237
BslI CCNNNNNNNGG 1 cut(s) 113
BsmAI GTCTC 1 cut(s) 59
BsmFI GGGAC 2 cut(s) 130, 237
BsnI GGCC 2 cut(s) 143, 189
Bsp1286I GDGCHC 1 cut(s) 172
Bsp143I GATC 1 cut(s) 42
BspANI GGCC 2 cut(s) 143, 189
BsrI ACTGG 1 cut(s) 51
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 1 cut(s) 42
Bst2UI CCWGG 3 cut(s) 114, 140, 233
Bst4CI ACNGT 2 cut(s) 121, 174
BstKTI GATC 1 cut(s) 45
BstMAI GTCTC 1 cut(s) 59
BstMBI GATC 1 cut(s) 42
BstNI CCWGG 3 cut(s) 114, 140, 233
BstSCI CCNGG 3 cut(s) 112, 138, 231
BstSFI CTRYAG 1 cut(s) 62
BstSLI GKGCMC 1 cut(s) 172
BsuRI GGCC 2 cut(s) 143, 189
BtsIMutI CAGTG 1 cut(s) 170
CaiI CAGNNNCTG 1 cut(s) 119
Cfr13I GGNCC 1 cut(s) 142
Csp6I GTAC 1 cut(s) 104
CviJI RGCY 2 cut(s) 143, 189
CviKI_1 RGCY 2 cut(s) 143, 189
CviQI GTAC 1 cut(s) 104
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 120
EcoRII CCWGG 3 cut(s) 112, 138, 231
FaqI GGGAC 2 cut(s) 130, 237
HaeIII GGCC 2 cut(s) 143, 189
Hpy166II GTNNAC 1 cut(s) 170
Hpy188I TCNGA 1 cut(s) 182
Hpy188III TCNNGA 1 cut(s) 12
Hpy8I GTNNAC 1 cut(s) 170
HpyAV CCTTC 1 cut(s) 68
HpyCH4III ACNGT 2 cut(s) 121, 174
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 4 cut(s) 27, 132, 170, 199
HpySE526I ACGT 1 cut(s) 135
Kzo9I GATC 1 cut(s) 42
LpnPI CCDG 7 cut(s) 64, 99, 125, 126, 152, 178, 218
LweI GCATC 2 cut(s) 36, 193
MaeII ACGT 1 cut(s) 135
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MboII GAAGA 3 cut(s) 22, 223, 226
MhlI GDGCHC 1 cut(s) 172
MluCI AATT 1 cut(s) 15
MnlI CCTC 1 cut(s) 229
MseI TTAA 1 cut(s) 81
MspR9I CCNGG 3 cut(s) 114, 140, 233
MvaI CCWGG 3 cut(s) 114, 140, 233
NdeII GATC 1 cut(s) 42
Psp6I CCWGG 3 cut(s) 112, 138, 231
PspGI CCWGG 3 cut(s) 112, 138, 231
PspPI GGNCC 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 119
RsaI GTAC 1 cut(s) 105
RsaNI GTAC 1 cut(s) 104
SaqAI TTAA 1 cut(s) 81
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 142
ScrFI CCNGG 3 cut(s) 114, 140, 233
SduI GDGCHC 1 cut(s) 172
SetI ASST 3 cut(s) 80, 138, 240
SfaNI GCATC 2 cut(s) 36, 193
SfcI CTRYAG 1 cut(s) 62
Sse9I AATT 1 cut(s) 15
StyD4I CCNGG 3 cut(s) 112, 138, 231
TaaI ACNGT 2 cut(s) 121, 174
TaiI ACGT 1 cut(s) 138
TasI AATT 1 cut(s) 15
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 1 cut(s) 177
TspRI CASTG 1 cut(s) 177
VneI GTGCAC 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.