Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003244

Physical Location & Seq

Genomic Coordinates Reverse (-)

64280346 .. 64289196

Gene Structure 8851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG418400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGTTCAAAGAAGCTCAGTCAAAGCGAGTCCCTTTTGACCACAACGTACTCGGACGCACGCTTCCATTTTACCCTAGCTGGTCCAAAGTGTACGGGAAGAACTTCTTGTACTGGTTCGGGTCAAAGCCCAGGCTGGCTATAGCCGACCCGGAAATGATCAAACAAGTCCTTATCAATACCAGTGGATCGTTTCAGAGGGTACCTTTAACTCCTTCCTCTAGGGTTCTCTTTGGAGATGGACTTCCTGCGCTCGAAGGTGAAAGATGGGCTTTCCATAGAAAAATTGTAAACCAAGCCTTCAAAATGGAGCGAGTCGAGGATTGGGTGCCACAAATTGTGGACATTACCAAGAAGATGATGGAGGAGTGGGAGGATATAAGGGGAGGAAGAGATGAGTTTGAAATGGAGGTACACAAACAAATGCATGAGGTATCAGCAGATGTTATGTCCAGAACAGTTTTCGGAAGCAGTTTTGAAGAGGGAAAGCGTATTTTCAACTTGCAAAAACTGCAAATGCATCTTTTCCTTAAGGCAGTTCAGAGCATCTATATTCCTGGATTCAGATTTTTGCCTACCAAGGATAACAGAGAGAGATGGAGACTAAATAAGGAAATCTGTGAATCAATACGGATGTTGATTGTGAATAATAGCAAAAACCTAGAGGAATCAAAAGTTCTGCTGAGTCTATTAATGTCTTCTTACAAGAATCTGGATGGTGTAGAGGAAAAACTAGGGCTACAGGAGATTATAGAAGAATGCAAGGCCTTTTACTTTGTTGGCAAGGAAACAATTGCTAATCTTTTGACTTGGTCACTTATCCTTCTGGCGCGGCATCAGGAATGGCAAAGCAAGGCTAGAGAAGAAGTGATTAGTTTCCTTTGTGGACACAATAAGCATCCAGTCGAAGAGAATTTGAACGACCTCAAGATTGTAAGCATGATAATTAACGAAGCACTCAGACTCTATCCTCCTGGTGTGCTACTAAATAGGCAAACATCAAAGAAGGTTAAGCTTGGGAGCCTGGAAATTCCTGCTGATACACAACTTGTCGTGCCCTTGATTGCTGTTCATCACGACACTGATATATGGGGTAAAGATGCCAATGAATTCAATCCATCAAGGTTCTTGGAGCCTCGAAGGCATTTAGCCTCGTTTCTTCCATTTGGTTTAGGGACCAGATACTGCCCCGGTCAGAATTTAGCACTTGTTGAAGCAAAACTGGTCTTAGCAATCATCGTCAGACACTATTCTTTCACGGTGTCACCTACATATGTCCATGCCCCAAAGTTTATGTCGGCATGCATGATGCTTCTTCTTCTTCCTCTTGCTTTTATTCCTGTCTATCTCTTAAAATTCGCGTACTCAACGTTGTGGCTCCCATGGAGAGTTCAAAAGCATTTTCAGAGGCAAGGTATAAGAGGCCCCGGCTACCGTCCGATCACCGGAAACTCGGCCGACTTTCGCCGTCTGTTTGAAGAAGCTCAGTCCAAGGCAATACCCTTCCACCACGACATCATCCAACGGGTGGCTCCGTTCTACCACAGATGGTCCCGCATGTACGGGAAGGATTTCTTGTACTGGTTCGGGTCGAGGCCCAGGCTTCTACTGTCCGACCCGGATATGGTGAAGGAGGTGCTCATGAATACGAGTGGTTTGTATCAGAAGAACGCGTACAACCCTTCTAGGCTTCTACTAAGATCCTGTTTGCTCAGGGCCTTGCTGGGTTGGCCGGTGAGAAATGGGCTCTTCACCGGAGGATTGCAACCCGAGCCTTCACCGTGGAGAGAGTCAAGGGCTGGGTGCCTGAAATTGTGGCTACTGGCTAGTGCCACAAACATGCTTGAGAAATGGGGGAGTTTGAAAGGGGACAAAGATGAGTTTGAGTTGGACGTTCATGAAGAATTTCATGAACTCTTGGCGGATATCATATCTAGGGCAGCCTTTGGAAGTAGTTTTGAGGAAGGGAAGCGAACTAGAAGTGTCTACATTCCCGGATACAGGAGCTTGGGGAAGAGAGAGCTTACATTAGTGAAACCTTGTTCACCTTCATCTTTTTATCCTTTGTCTTGGGTTCTAGCATTTTTAGTAACTTGTCAGTTTCTTCGAATCCTAACATTCTACTCCACCCACCTTCCTGGTCCAAATTACCATTGTCGTGAGGGCTCTAGACTTGCTAGGTTGCCTCCTCCAGAGACTGTATTTGAGCCTTGTGCTTTGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0008395 GO:0009719 GO:0009725 GO:0009741 GO:0010033 GO:0010268 GO:0010817 GO:0014070 GO:0016128 GO:0016131 GO:0016491 GO:0033993 GO:0042221 GO:0042445 GO:0042592 GO:0044238 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901615 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

740

Amino Acids

85.52

Weight (kDa)

9.28

Isoelectric Point (pI)

51.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	28 - 436	4e-76	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75130
fragaria_vesca	FvH4_2g40040 FvH4_2g40040 FvH4_2g40051
malus_domestica	MD08G1032800.v1.1 MD08G1032900.v1.1 MD08G1033000.v1.1 MD15G1029500.v1.1 MD15G1029600.v1.1
prunus_persica	Prupe.1G381900_v2.0.a1 Prupe.1G381900_v2.0.a1
pyrus_communis	pycom08g02610
rosa_chinensis	RchiOBHm_Chr6g0300691 RchiOBHm_Chr6g0300701 RchiOBHm_Chr6g0300711
rosa_laevigata	RLG00000011309 RLG00000011310 RLG00000011311
rosa_multiflora	Rmu_sc0004226.1_g000009 Rmu_sc0014374.1_g000005 Rmu_sc0014374.1_g000013 Rmu_sc0014374.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167490 Rroxscaffold_7G00167500 Rroxscaffold_7G00167510
rosa_rugosa	Rorug06G0298300 Rorug06G0298400 Rorug06G0298500 Rorug06G0298600
rosa_samantha	Rh6BG418400 Rh6BG418500 Rh6CG425900 Rh6DG411300 Rh6DG411400
rosa_wichuraiana	Rw0G002170 Rw6G035980 Rw6G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	199
AccB1I	GGYRCC	3 cut(s)	199, 325, 1800
AccB7I	CCANNNNNTGG	1 cut(s)	1525
AccI	GTMKAC	1 cut(s)	1983
AccII	CGCG	3 cut(s)	829, 1358, 1670
AciI	CCGC	3 cut(s)	829, 1552, 1919
AclI	AACGTT	1 cut(s)	1367
AclWI	GGATC	2 cut(s)	193, 1692
AcoI	YGGCCR	2 cut(s)	1452, 1727
AcsI	RAATTY	6 cut(s)	910, 1026, 1106, 1195, 1352, 1901
AfaI	GTAC	9 cut(s)	48, 92, 110, 201, 411, 1361, 1559, 1577, 1673
AfiI	CCNNNNNNNGG	4 cut(s)	1442, 1525, 1621, 1998
AflII	CTTAAG	1 cut(s)	527
AflIII	ACRYGT	1 cut(s)	1668
AjnI	CCWGG	6 cut(s)	128, 553, 970, 1020, 1595, 2134
AluBI	AGCT	6 cut(s)	14, 78, 1012, 1481, 2004, 2020
AluI	AGCT	6 cut(s)	14, 78, 1012, 1481, 2004, 2020
Alw21I	GWGCWC	1 cut(s)	1638
Alw26I	GTCTC	2 cut(s)	592, 2186
AlwI	GGATC	2 cut(s)	193, 1692
AlwNI	CAGNNNCTG	2 cut(s)	1182, 2195
Ama87I	CYCGRG	1 cut(s)	1766
AoxI	GGCC	6 cut(s)	762, 1420, 1452, 1592, 1713, 1727
ApeKI	GCWGC	1 cut(s)	1937
ApoI	RAATTY	6 cut(s)	910, 1026, 1106, 1195, 1352, 1901
ArsI	GACNNNNNNTTYG	2 cut(s)	1277, 1309
AseI	ATTAAT	1 cut(s)	689
Asp700I	GAANNNNTTC	3 cut(s)	101, 1568, 1902
Asp718I	GGTACC	1 cut(s)	199
AspLEI	GCGC	2 cut(s)	250, 829
AspS9I	GGNCC	7 cut(s)	81, 1173, 1421, 1548, 1593, 1713, 2138
AsuC2I	CCSGG	5 cut(s)	149, 1188, 1425, 1616, 1992
AsuHPI	GGTGA	8 cut(s)	269, 1254, 1432, 1636, 1741, 1744, 1767, 2034
AsuII	TTCGAA	1 cut(s)	2104
AvaI	CYCGRG	1 cut(s)	1766
AvaII	GGWCC	4 cut(s)	81, 1173, 1548, 2138
BaeGI	GKGCMC	1 cut(s)	1056
BanI	GGYRCC	3 cut(s)	199, 325, 1800
BanII	GRGCYC	2 cut(s)	1746, 2165
BarI	GAAGNNNNNNTAC	2 cut(s)	1655, 1687
BbsI	GAAGAC	1 cut(s)	687
Bbv12I	GWGCWC	1 cut(s)	1638
BbvI	GCAGC	1 cut(s)	1949
BccI	CCATC	7 cut(s)	230, 258, 352, 588, 707, 1123, 1539
BceAI	ACGGC	1 cut(s)	1449
BciT130I	CCWGG	6 cut(s)	130, 555, 972, 1022, 1597, 2136
BciVI	GTATCC	1 cut(s)	1988
BclI	TGATCA	1 cut(s)	156
BcnI	CCSGG	5 cut(s)	149, 1188, 1425, 1616, 1992
BcoDI	GTCTC	2 cut(s)	592, 2186
BfmI	CTRYAG	2 cut(s)	138, 737
BfrI	CTTAAG	1 cut(s)	527
BfuI	GTATCC	1 cut(s)	1988
BglI	GCCNNNNNGGC	1 cut(s)	1138
BisI	GCNGC	2 cut(s)	830, 1938
BlsI	GCNGC	2 cut(s)	831, 1939
Bme18I	GGWCC	4 cut(s)	81, 1173, 1548, 2138
BmeT110I	CYCGRG	1 cut(s)	1766
BmgT120I	GGNCC	7 cut(s)	81, 1173, 1421, 1548, 1593, 1713, 2138
BmsI	GCATC	6 cut(s)	526, 552, 841, 904, 1087, 1296
BpiI	GAAGAC	1 cut(s)	687
BpmI	CTGGAG	1 cut(s)	2172
Bpu10I	CCTNAGC	1 cut(s)	1709
Bpu14I	TTCGAA	1 cut(s)	2104
BpuEI	CTTGAG	2 cut(s)	908, 1862
BpuMI	CCSGG	5 cut(s)	149, 1188, 1425, 1616, 1992
BsaJI	CCNNGG	8 cut(s)	128, 576, 1186, 1379, 1423, 1488, 1595, 1778
BsaWI	WCCGGW	2 cut(s)	1442, 1751
Bsc4I	CCNNNNNNNGG	4 cut(s)	1442, 1525, 1621, 1998
Bse118I	RCCGGY	1 cut(s)	1729
Bse1I	ACTGG	6 cut(s)	116, 180, 899, 1224, 1583, 1824
BseBI	CCWGG	6 cut(s)	130, 555, 972, 1022, 1597, 2136
BseDI	CCNNGG	8 cut(s)	128, 576, 1186, 1379, 1423, 1488, 1595, 1778
BseGI	GGATG	4 cut(s)	636, 718, 895, 1515
BseLI	CCNNNNNNNGG	4 cut(s)	1442, 1525, 1621, 1998
BseMII	CTCAG	5 cut(s)	29, 671, 970, 1496, 1723
BseNI	ACTGG	6 cut(s)	116, 180, 899, 1224, 1583, 1824
BseRI	GAGGAG	2 cut(s)	377, 2175
BseSI	GKGCMC	1 cut(s)	1056
BseX3I	CGGCCG	1 cut(s)	1452
BseXI	GCAGC	1 cut(s)	1949
BseYI	CCCAGC	2 cut(s)	1720, 1796
Bsh1236I	CGCG	3 cut(s)	829, 1358, 1670
Bsh1285I	CGRYCG	1 cut(s)	1455
BshFI	GGCC	6 cut(s)	764, 1422, 1454, 1594, 1715, 1729
BshNI	GGYRCC	3 cut(s)	199, 325, 1800
BsiEI	CGRYCG	1 cut(s)	1455
BsiHKAI	GWGCWC	1 cut(s)	1638
BsiHKCI	CYCGRG	1 cut(s)	1766
BsiSI	CCGG	8 cut(s)	149, 1188, 1425, 1443, 1616, 1730, 1752, 1992
BslFI	GGGAC	4 cut(s)	14, 1186, 1534, 1880
BslI	CCNNNNNNNGG	4 cut(s)	1442, 1525, 1621, 1998
BsmAI	GTCTC	2 cut(s)	592, 2186
BsmFI	GGGAC	4 cut(s)	14, 1186, 1534, 1880
BsmI	GAATGC	1 cut(s)	761
BsnI	GGCC	6 cut(s)	764, 1422, 1454, 1594, 1715, 1729
BsoBI	CYCGRG	1 cut(s)	1766
Bsp119I	TTCGAA	1 cut(s)	2104
Bsp1286I	GDGCHC	4 cut(s)	1056, 1638, 1746, 2165
Bsp143I	GATC	4 cut(s)	156, 185, 1437, 1697
Bsp19I	CCATGG	1 cut(s)	1379
BspACI	CCGC	3 cut(s)	829, 1552, 1919
BspANI	GGCC	6 cut(s)	764, 1422, 1454, 1594, 1715, 1729
BspCNI	CTCAG	5 cut(s)	28, 672, 969, 1495, 1722
BspFNI	CGCG	3 cut(s)	829, 1358, 1670
BspHI	TCATGA	3 cut(s)	1638, 1894, 1906
BspPI	GGATC	2 cut(s)	193, 1692
BspQI	GCTCTTC	1 cut(s)	1751
BspT104I	TTCGAA	1 cut(s)	2104
BspT107I	GGYRCC	3 cut(s)	199, 325, 1800
BspTI	CTTAAG	1 cut(s)	527
BsrFI	RCCGGY	1 cut(s)	1729
BsrI	ACTGG	6 cut(s)	116, 180, 899, 1224, 1583, 1824
BssAI	RCCGGY	1 cut(s)	1729
BssECI	CCNNGG	8 cut(s)	128, 576, 1186, 1379, 1423, 1488, 1595, 1778
BssMI	GATC	4 cut(s)	156, 185, 1437, 1697
BssT1I	CCWWGG	3 cut(s)	576, 1379, 1488
Bst2UI	CCWGG	6 cut(s)	130, 555, 972, 1022, 1597, 2136
Bst4CI	ACNGT	6 cut(s)	457, 1258, 1433, 1608, 1779, 2197
Bst6I	CTCTTC	5 cut(s)	382, 471, 900, 1751, 2006
BstAFI	CTTAAG	1 cut(s)	527
BstAPI	GCANNNNNTGC	1 cut(s)	508
BstBI	TTCGAA	1 cut(s)	2104
BstC8I	GCNNGC	3 cut(s)	59, 135, 1300
BstDEI	CTNAG	7 cut(s)	15, 680, 956, 1225, 1482, 1694, 1709
BstDSI	CCRYGG	2 cut(s)	1379, 1778
BstF5I	GGATG	4 cut(s)	636, 718, 895, 1515
BstFNI	CGCG	3 cut(s)	829, 1358, 1670
BstHHI	GCGC	2 cut(s)	250, 829
BstKTI	GATC	4 cut(s)	159, 188, 1440, 1700
BstMAI	GTCTC	2 cut(s)	592, 2186
BstMBI	GATC	4 cut(s)	156, 185, 1437, 1697
BstMCI	CGRYCG	1 cut(s)	1455
BstMWI	GCNNNNNNNGC	4 cut(s)	508, 1138, 1726, 1768
BstNI	CCWGG	6 cut(s)	130, 555, 972, 1022, 1597, 2136
BstNSI	RCATGY	3 cut(s)	1302, 1558, 1840
BstSFI	CTRYAG	2 cut(s)	138, 737
BstSLI	GKGCMC	1 cut(s)	1056
BstUI	CGCG	3 cut(s)	829, 1358, 1670
BstV1I	GCAGC	1 cut(s)	1949
BstV2I	GAAGAC	1 cut(s)	687
BstX2I	RGATCY	1 cut(s)	1697
BstXI	CCANNNNNNTGG	1 cut(s)	2135
BstYI	RGATCY	1 cut(s)	1697
BstZI	CGGCCG	1 cut(s)	1452
BsuI	GTATCC	1 cut(s)	1988
BsuRI	GGCC	6 cut(s)	764, 1422, 1454, 1594, 1715, 1729
BtgI	CCRYGG	2 cut(s)	1379, 1778
BtsCI	GGATG	4 cut(s)	636, 718, 895, 1515
BtsIMutI	CAGTG	2 cut(s)	187, 1077
Cac8I	GCNNGC	3 cut(s)	59, 135, 1300
CaiI	CAGNNNCTG	2 cut(s)	1182, 2195
CciI	TCATGA	3 cut(s)	1638, 1894, 1906
CfoI	GCGC	2 cut(s)	250, 829
Cfr10I	RCCGGY	1 cut(s)	1729
Cfr13I	GGNCC	7 cut(s)	81, 1173, 1421, 1548, 1593, 1713, 2138
CseI	GACGC	1 cut(s)	63
Csp6I	GTAC	9 cut(s)	47, 91, 109, 200, 410, 1360, 1558, 1576, 1672
CspCI	CAANNNNNGTGG	2 cut(s)	163, 198
CviQI	GTAC	9 cut(s)	47, 91, 109, 200, 410, 1360, 1558, 1576, 1672
DdeI	CTNAG	7 cut(s)	15, 680, 956, 1225, 1482, 1694, 1709
DpnI	GATC	4 cut(s)	158, 187, 1439, 1699
DpnII	GATC	4 cut(s)	156, 185, 1437, 1697
EaeI	YGGCCR	2 cut(s)	1452, 1727
EagI	CGGCCG	1 cut(s)	1452
Eam1104I	CTCTTC	5 cut(s)	382, 471, 900, 1751, 2006
EarI	CTCTTC	5 cut(s)	382, 471, 900, 1751, 2006
EciI	GGCGGA	1 cut(s)	1934
EclXI	CGGCCG	1 cut(s)	1452
Eco130I	CCWWGG	3 cut(s)	576, 1379, 1488
Eco147I	AGGCCT	1 cut(s)	764
Eco24I	GRGCYC	2 cut(s)	1746, 2165
Eco32I	GATATC	1 cut(s)	1924
Eco47I	GGWCC	4 cut(s)	81, 1173, 1548, 2138
Eco52I	CGGCCG	1 cut(s)	1452
Eco88I	CYCGRG	1 cut(s)	1766
EcoO109I	RGGNCCY	2 cut(s)	1421, 1713
EcoRI	GAATTC	1 cut(s)	1106
EcoRII	CCWGG	6 cut(s)	128, 553, 970, 1020, 1595, 2134
EcoRV	GATATC	1 cut(s)	1924
EcoT14I	CCWWGG	3 cut(s)	576, 1379, 1488
EcoT22I	ATGCAT	3 cut(s)	426, 519, 1304
EcoT38I	GRGCYC	2 cut(s)	1746, 2165
ErhI	CCWWGG	3 cut(s)	576, 1379, 1488
FalI	AAGNNNNNCTT	6 cut(s)	89, 121, 253, 285, 1556, 1588
FaqI	GGGAC	4 cut(s)	14, 1186, 1534, 1880
FauI	CCCGC	1 cut(s)	1559
FauNDI	CATATG	1 cut(s)	1270
FbaI	TGATCA	1 cut(s)	156
FblI	GTMKAC	1 cut(s)	1983
Fnu4HI	GCNGC	2 cut(s)	830, 1938
FokI	GGATG	4 cut(s)	643, 725, 882, 1502
FriOI	GRGCYC	2 cut(s)	1746, 2165
Fsp4HI	GCNGC	2 cut(s)	830, 1938
GlaI	GCGC	2 cut(s)	249, 828
GluI	GCNGC	2 cut(s)	830, 1938
GsaI	CCCAGC	2 cut(s)	1724, 1800
GsuI	CTGGAG	1 cut(s)	2172
HaeIII	GGCC	6 cut(s)	764, 1422, 1454, 1594, 1715, 1729
HapII	CCGG	8 cut(s)	149, 1188, 1425, 1443, 1616, 1730, 1752, 1992
HgaI	GACGC	1 cut(s)	63
HhaI	GCGC	2 cut(s)	250, 829
Hin6I	GCGC	2 cut(s)	248, 827
HinP1I	GCGC	2 cut(s)	248, 827
HindIII	AAGCTT	1 cut(s)	1010
HpaII	CCGG	8 cut(s)	149, 1188, 1425, 1443, 1616, 1730, 1752, 1992
HphI	GGTGA	8 cut(s)	269, 1254, 1432, 1636, 1741, 1744, 1767, 2034
Hpy166II	GTNNAC	7 cut(s)	91, 289, 340, 412, 884, 1984, 2042
Hpy8I	GTNNAC	7 cut(s)	91, 289, 340, 412, 884, 1984, 2042
HpyCH4III	ACNGT	6 cut(s)	457, 1258, 1433, 1608, 1779, 2197
HpyCH4IV	ACGT	3 cut(s)	45, 1367, 1890
HpyCH4V	TGCA	7 cut(s)	424, 502, 511, 517, 759, 1302, 1762
HpyF10VI	GCNNNNNNNGC	4 cut(s)	508, 1138, 1726, 1768
HpyF3I	CTNAG	7 cut(s)	15, 680, 956, 1225, 1482, 1694, 1709
HpySE526I	ACGT	3 cut(s)	45, 1367, 1890
HspAI	GCGC	2 cut(s)	248, 827
KpnI	GGTACC	1 cut(s)	203
Ksp22I	TGATCA	1 cut(s)	156
Kzo9I	GATC	4 cut(s)	156, 185, 1437, 1697
LguI	GCTCTTC	1 cut(s)	1751
LmnI	GCTCC	6 cut(s)	307, 1017, 1129, 1380, 1534, 2001
Lsp1109I	GCAGC	1 cut(s)	1949
LweI	GCATC	6 cut(s)	526, 552, 841, 904, 1087, 1296
MaeII	ACGT	3 cut(s)	45, 1367, 1890
MaeIII	GTNAC	3 cut(s)	810, 1260, 2086
MalI	GATC	4 cut(s)	158, 187, 1439, 1699
MboI	GATC	4 cut(s)	156, 185, 1437, 1697
MfeI	CAATTG	1 cut(s)	789
MflI	RGATCY	1 cut(s)	1697
MhlI	GDGCHC	4 cut(s)	1056, 1638, 1746, 2165
MluI	ACGCGT	1 cut(s)	1668
MlyI	GAGTC	5 cut(s)	36, 321, 691, 954, 1796
MmeI	TCCRAC	3 cut(s)	1543, 1635, 1866
Mph1103I	ATGCAT	3 cut(s)	426, 519, 1304
MroXI	GAANNNNTTC	3 cut(s)	101, 1568, 1902
MseI	TTAA	6 cut(s)	206, 528, 689, 945, 1008, 1349
MslI	CAYNNNNRTG	2 cut(s)	1835, 2154
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	8 cut(s)	149, 1188, 1425, 1443, 1616, 1730, 1752, 1992
MunI	CAATTG	1 cut(s)	789
Mva1269I	GAATGC	1 cut(s)	761
MvaI	CCWGG	6 cut(s)	130, 555, 972, 1022, 1597, 2136
MvnI	CGCG	3 cut(s)	829, 1358, 1670
MwoI	GCNNNNNNNGC	4 cut(s)	508, 1138, 1726, 1768
NciI	CCSGG	5 cut(s)	149, 1188, 1425, 1616, 1992
NcoI	CCATGG	1 cut(s)	1379
NdeI	CATATG	1 cut(s)	1270
NdeII	GATC	4 cut(s)	156, 185, 1437, 1697
NmeAIII	GCCGAG	1 cut(s)	1430
NmuCI	GTSAC	2 cut(s)	810, 1260
NsiI	ATGCAT	3 cut(s)	426, 519, 1304
NspI	RCATGY	3 cut(s)	1302, 1558, 1840
NspV	TTCGAA	1 cut(s)	2104
PaeI	GCATGC	1 cut(s)	1302
PagI	TCATGA	3 cut(s)	1638, 1894, 1906
PceI	AGGCCT	1 cut(s)	764
PciSI	GCTCTTC	1 cut(s)	1751
PctI	GAATGC	1 cut(s)	761
PdmI	GAANNNNTTC	3 cut(s)	101, 1568, 1902
PfeI	GAWTC	5 cut(s)	558, 620, 665, 706, 2106
PflFI	GACNNNGTC	1 cut(s)	808
PflMI	CCANNNNNTGG	1 cut(s)	1525
PfoI	TCCNGGA	2 cut(s)	553, 1990
PkrI	GCNGC	2 cut(s)	831, 1939
PleI	GAGTC	5 cut(s)	35, 320, 690, 954, 1795
PpsI	GAGTC	5 cut(s)	35, 320, 690, 954, 1795
PshBI	ATTAAT	1 cut(s)	689
Psp1406I	AACGTT	1 cut(s)	1367
Psp6I	CCWGG	6 cut(s)	128, 553, 970, 1020, 1595, 2134
PspFI	CCCAGC	2 cut(s)	1720, 1796
PspGI	CCWGG	6 cut(s)	128, 553, 970, 1020, 1595, 2134
PspPI	GGNCC	7 cut(s)	81, 1173, 1421, 1548, 1593, 1713, 2138
PsrI	GAACNNNNNNTAC	2 cut(s)	92, 124
PstNI	CAGNNNCTG	2 cut(s)	1182, 2195
PsuI	RGATCY	1 cut(s)	1697
PsyI	GACNNNGTC	1 cut(s)	808
RsaI	GTAC	9 cut(s)	48, 92, 110, 201, 411, 1361, 1559, 1577, 1673
RsaNI	GTAC	9 cut(s)	47, 91, 109, 200, 410, 1360, 1558, 1576, 1672
RseI	CAYNNNNRTG	2 cut(s)	1835, 2154
SapI	GCTCTTC	1 cut(s)	1751
SaqAI	TTAA	6 cut(s)	206, 528, 689, 945, 1008, 1349
SatI	GCNGC	2 cut(s)	830, 1938
Sau3AI	GATC	4 cut(s)	156, 185, 1437, 1697
Sau96I	GGNCC	7 cut(s)	81, 1173, 1421, 1548, 1593, 1713, 2138
SchI	GAGTC	5 cut(s)	36, 321, 691, 954, 1796
SduI	GDGCHC	4 cut(s)	1056, 1638, 1746, 2165
SfaNI	GCATC	6 cut(s)	526, 552, 841, 904, 1087, 1296
SfcI	CTRYAG	2 cut(s)	138, 737
SfuI	TTCGAA	1 cut(s)	2104
SinI	GGWCC	4 cut(s)	81, 1173, 1548, 2138
SmiMI	CAYNNNNRTG	2 cut(s)	1835, 2154
SmlI	CTYRAG	3 cut(s)	527, 923, 1841
SmoI	CTYRAG	3 cut(s)	527, 923, 1841
SphI	GCATGC	1 cut(s)	1302
SseBI	AGGCCT	1 cut(s)	764
SsiI	CCGC	3 cut(s)	829, 1552, 1919
StuI	AGGCCT	1 cut(s)	764
StyI	CCWWGG	3 cut(s)	576, 1379, 1488
TaaI	ACNGT	6 cut(s)	457, 1258, 1433, 1608, 1779, 2197
TaiI	ACGT	3 cut(s)	48, 1370, 1893
TaqI	TCGA	6 cut(s)	252, 315, 903, 1135, 1589, 2104
TatI	WGTACW	2 cut(s)	108, 1575
TauI	GCSGC	1 cut(s)	832
TfiI	GAWTC	5 cut(s)	558, 620, 665, 706, 2106
Tru1I	TTAA	6 cut(s)	206, 528, 689, 945, 1008, 1349
Tru9I	TTAA	6 cut(s)	206, 528, 689, 945, 1008, 1349
TscAI	CASTG	2 cut(s)	187, 1084
TseFI	GTSAC	2 cut(s)	810, 1260
TseI	GCWGC	1 cut(s)	1937
Tsp45I	GTSAC	2 cut(s)	810, 1260
TspDTI	ATGAA	8 cut(s)	1058, 1119, 1655, 1883, 1895, 1911, 1923, 2037
TspGWI	ACGGA	2 cut(s)	643, 1521
TspRI	CASTG	2 cut(s)	187, 1084
Tth111I	GACNNNGTC	1 cut(s)	808
Van91I	CCANNNNNTGG	1 cut(s)	1525
Vha464I	CTTAAG	1 cut(s)	527
VpaK11BI	GGWCC	4 cut(s)	81, 1173, 1548, 2138
VspI	ATTAAT	1 cut(s)	689
XapI	RAATTY	6 cut(s)	910, 1026, 1106, 1195, 1352, 1901
XbaI	TCTAGA	1 cut(s)	2165
XceI	RCATGY	3 cut(s)	1302, 1558, 1840
XcmI	CCANNNNNNNNNTGG	1 cut(s)	355
XmiI	GTMKAC	1 cut(s)	1983
XmnI	GAANNNNTTC	3 cut(s)	101, 1568, 1902
Zsp2I	ATGCAT	3 cut(s)	426, 519, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.