Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003244

Physical Location & Seq

Genomic Coordinates Forward (+)

8453621 .. 8458956

Gene Structure 5336 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011310

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCATCTTCTTCTTCTTTTTGTTCTTCCTCTTATTTTCATCTTGAAATTTGTCTACTCCACAATATTGGTTCCGTGGAGGACACGAAACCACTTCCTCAAGCAAGGCATTGATGGACCTGCTTACCGTCCGATCATCGGCAACTCGGCCGAGATCCGCCTTATGTTCAAAGAAGCTCTGTCAAAGCGAGTCCCTTTTGACCACAACGTACTCGGACGCACGCTTCCATTTTACCCTAGCTGGTCCAAAGTGTACGGGAAGAACTTCTTGTACTGGTTCGGGACAAAGCCCAGGCTGGCTATAGCCGACCCGGAAATGATCAAACAAGTCCTTATCAATACCAGTGGATCGTTTCAGAGGGTACCTTTAACTCCTTCCTCTAGGGTTCTCTTTGGAGATGGACTTCCTGCACTCGAAGGTGAAAGATGGGCTTTCCATAGGAAAATTGTAAACCAAGCCTTCAAAATGGAGCGAATCGAGGATTGGGTGCCACAAATTGTGGACATTACCATGAAGATGATGGAGGAGTGGGAGGATATAAGGGGAGGAAGATATGAGTTTGAAATGGAGGTACACAAACAAATGCACGAGGTATCAGCAGATGTTATGTCCAGAACAGTTTTCGGAAGCAGTTTTGAAGAGGGAAAGCGTATTTTCAACTTGCAAAAACAGCAAATGCATCTTTTCCTTAAGGCAGTTCAGAGCATCTATATTCCTGGATTCAGAATTTTGCCTACCAAGGATAACAGAGAGAGGTGGAGACTAAATAAGGAAATCTGTGAATCAATACGGATGTTAATTGAGAATAATAGCAAAAACCTAGAGGAATCAAAAGTTCTGCTGAGTCTATTAATGTCTTCTCACAAGAATCTGGATGGAATAGAGGAAAAACTAGGGCTACAGGAAATTATAGAAGAATGCAAGGCCTTCTACTTTGTTGGCAAGGAAACAATTGCTAATCTTTTGACTTGGTCACTTATCCTTCTGGCGCAGCATCAAGAATGGCAAAGCAAGGCTAGAGAAGAAGTGATTGTTTTCCTTTGTGGTCCTTGTGGACACAATAAGCATCCAGTAGAAGAGAATTTGAACGACCTCAAGATTGTAAGCATGATAATTAACGAAGCACTTAGACTCTATCCTCCTGGTGTGCTACTAAATAGGCAAACATCAAATAAGGTTAAGCTTGGGAGCCTGGAAATTCCTGCTGACACACAACTTGTCTTGCCCTTGATTGCTGTTCATCACGACACTGATATATGGGGTAAAGATGCTAATGAATTCAATCCATCAAGGTTCTTGGAGCCTCGAAGGCATTTAGCCTCGTTTCTTCCATTTGGTTTAGGGACCAGATACTGCCCCGGTCAGAATTTAGCACTCGTTGAAGCAAAACTGACCTCTTCTGATCTTGATCTTCATTCTCAGTTGTTGAAGGGATTGAAGGGATTGTTTCCAGAACAACAGGAACGTCTGAAGAAACTGAAGGTAGAACATGGCAAGTCTCTGTTTCTGTCTATGTCGGCATGCATGATGCTTCTTCTTCTTCCTCTTGTTTTTATTGTTGTCTCTCTTTTAAAATTCGCGTACTCAACGTTGTGGCTCCTCTGGAGAGTTCCAGGGGTGGAGCCAATTAAAGCCGAGTGGGGGCTGCGGCCCCCATTCTTCTTCTTCTTCCTCGGCCAGTCAATCCTACATTTGCTCCTCCTCCAAAAACTAGAGATCGACCTTCTCCCCTTCCTCAATGCACAACGCCTTCTTCCCATAACGCTTCTTGATCTCCTCCACATCAGTCACGCTTCTAACGGTGTCGACCAAGTGGAGAAAGTTGATTTGTTTCATTACTTGGTGCAGCTTGCAGATGTAGCCTTGCTTCTACTGCAGATTGCAGAATGGTACTATTTGCAGCCTTGCTGGAGAGGCAGAAAGGAAAGAAAATTTTTTGCCCCCGTTTATATACATTCCTGCCTCCTCCAATGGAGAGTTCAAAAGCATTTTCAAAGGCAAGGTATAAGAGGCCTCGACTACCGTCCAATCGCCCGAAACTCCACCGATTTTCGCCATCAGTTTGAAGAAGCTCAGTCCAAGCCAATTCCCTTCCACCACGACATCATCCAACGCGTGGCTCTGTTCTACCACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0008395 GO:0009719 GO:0009725 GO:0009741 GO:0010033 GO:0010268 GO:0010817 GO:0014070 GO:0016128 GO:0016131 GO:0016491 GO:0033993 GO:0042221 GO:0042445 GO:0042592 GO:0044238 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901615 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

713

Amino Acids

82.92

Weight (kDa)

9.14

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	82 - 465	5.7e-68	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75130
fragaria_vesca	FvH4_2g40040 FvH4_2g40040 FvH4_2g40051
malus_domestica	MD08G1032800.v1.1 MD08G1032900.v1.1 MD08G1033000.v1.1 MD15G1029500.v1.1 MD15G1029600.v1.1
prunus_persica	Prupe.1G381900_v2.0.a1 Prupe.1G381900_v2.0.a1
pyrus_communis	pycom08g02610
rosa_chinensis	RchiOBHm_Chr6g0300691 RchiOBHm_Chr6g0300701 RchiOBHm_Chr6g0300711
rosa_laevigata	RLG00000011309 RLG00000011310 RLG00000011311
rosa_multiflora	Rmu_sc0004226.1_g000009 Rmu_sc0014374.1_g000005 Rmu_sc0014374.1_g000013 Rmu_sc0014374.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167490 Rroxscaffold_7G00167500 Rroxscaffold_7G00167510
rosa_rugosa	Rorug06G0298300 Rorug06G0298400 Rorug06G0298500 Rorug06G0298600
rosa_samantha	Rh6BG418400 Rh6BG418500 Rh6CG425900 Rh6DG411300 Rh6DG411400
rosa_wichuraiana	Rw0G002170 Rw6G035980 Rw6G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	127
Acc65I	GGTACC	1 cut(s)	361
AccB1I	GGYRCC	2 cut(s)	361, 487
AccB7I	CCANNNNNTGG	1 cut(s)	2116
AccI	GTMKAC	2 cut(s)	54, 1806
AccII	CGCG	2 cut(s)	1580, 2115
AciI	CCGC	2 cut(s)	157, 1648
AclI	AACGTT	1 cut(s)	1589
AclWI	GGATC	2 cut(s)	148, 355
AcoI	YGGCCR	2 cut(s)	147, 1675
AcsI	RAATTY	8 cut(s)	47, 726, 1081, 1197, 1277, 1366, 1574, 1931
AcuI	CTGAAG	2 cut(s)	1490, 1499
AfaI	GTAC	7 cut(s)	210, 254, 272, 363, 573, 1583, 1892
AfiI	CCNNNNNNNGG	3 cut(s)	137, 1641, 2116
AflII	CTTAAG	1 cut(s)	689
AflIII	ACRYGT	1 cut(s)	2113
AjnI	CCWGG	5 cut(s)	290, 715, 1141, 1191, 1612
AjuI	GAANNNNNNNTTGG	4 cut(s)	466, 498, 1962, 1994
AluBI	AGCT	5 cut(s)	176, 240, 1183, 1849, 2072
AluI	AGCT	5 cut(s)	176, 240, 1183, 1849, 2072
Alw26I	GTCTC	3 cut(s)	754, 1503, 1567
AlwI	GGATC	2 cut(s)	148, 355
AlwNI	CAGNNNCTG	1 cut(s)	1353
AoxI	GGCC	5 cut(s)	147, 924, 1649, 1675, 2011
ApeKI	GCWGC	4 cut(s)	991, 1645, 1846, 1900
ApoI	RAATTY	8 cut(s)	47, 726, 1081, 1197, 1277, 1366, 1574, 1931
AseI	ATTAAT	1 cut(s)	851
Asp700I	GAANNNNTTC	1 cut(s)	263
Asp718I	GGTACC	1 cut(s)	361
AspLEI	GCGC	1 cut(s)	991
AspS9I	GGNCC	5 cut(s)	116, 243, 1046, 1344, 1650
AsuC2I	CCSGG	2 cut(s)	311, 1359
AsuHPI	GGTGA	1 cut(s)	431
AvaII	GGWCC	4 cut(s)	116, 243, 1046, 1344
BanI	GGYRCC	2 cut(s)	361, 487
BarI	GAAGNNNNNNTAC	2 cut(s)	1851, 1883
BauI	CACGAG	1 cut(s)	587
BbsI	GAAGAC	1 cut(s)	849
BbvI	GCAGC	4 cut(s)	1003, 1632, 1858, 1912
BccI	CCATC	7 cut(s)	107, 392, 420, 514, 869, 1294, 2064
BciT130I	CCWGG	5 cut(s)	292, 717, 1143, 1193, 1614
BclI	TGATCA	1 cut(s)	318
BcnI	CCSGG	2 cut(s)	311, 1359
BcoDI	GTCTC	3 cut(s)	754, 1503, 1567
BfaI	CTAG	6 cut(s)	237, 381, 821, 893, 1017, 1712
BfmI	CTRYAG	3 cut(s)	300, 899, 1874
BfrI	CTTAAG	1 cut(s)	689
BfuAI	ACCTGC	1 cut(s)	127
BglI	GCCNNNNNGGC	1 cut(s)	1309
BisI	GCNGC	5 cut(s)	992, 1646, 1649, 1847, 1901
BlsI	GCNGC	5 cut(s)	993, 1647, 1650, 1848, 1902
Bme1390I	CCNGG	7 cut(s)	292, 311, 717, 1143, 1193, 1359, 1614
Bme18I	GGWCC	4 cut(s)	116, 243, 1046, 1344
BmgT120I	GGNCC	5 cut(s)	116, 243, 1046, 1344, 1650
BmiI	GGNNCC	9 cut(s)	72, 363, 489, 1190, 1302, 1345, 1598, 1623, 1652
BmrFI	CCNGG	7 cut(s)	292, 311, 717, 1143, 1193, 1359, 1614
BmsI	GCATC	7 cut(s)	13, 688, 714, 1003, 1075, 1258, 1518
BoxI	GACNNNNGTC	1 cut(s)	2022
BpiI	GAAGAC	1 cut(s)	849
BpmI	CTGGAG	2 cut(s)	1624, 1930
BpuEI	CTTGAG	2 cut(s)	83, 1079
BpuMI	CCSGG	2 cut(s)	311, 1359
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaJI	CCNNGG	6 cut(s)	74, 290, 738, 1357, 1613, 1672
BsaXI	ACNNNNNCTCC	2 cut(s)	1680, 1710
Bsc4I	CCNNNNNNNGG	3 cut(s)	137, 1641, 2116
Bse1I	ACTGG	4 cut(s)	278, 342, 1070, 1678
Bse8I	GATNNNNATC	1 cut(s)	1407
BseBI	CCWGG	5 cut(s)	292, 717, 1143, 1193, 1614
BseDI	CCNNGG	6 cut(s)	74, 290, 738, 1357, 1613, 1672
BseGI	GGATG	4 cut(s)	798, 880, 1066, 2106
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	3 cut(s)	137, 1641, 2116
BseMII	CTCAG	3 cut(s)	833, 1433, 2087
BseNI	ACTGG	4 cut(s)	278, 342, 1070, 1678
BseRI	GAGGAG	6 cut(s)	539, 1589, 1688, 1691, 1766, 1955
BseX3I	CGGCCG	1 cut(s)	147
BseXI	GCAGC	4 cut(s)	1003, 1632, 1858, 1912
BsgI	GTGCAG	2 cut(s)	393, 1865
Bsh1236I	CGCG	2 cut(s)	1580, 2115
Bsh1285I	CGRYCG	1 cut(s)	150
BshFI	GGCC	5 cut(s)	149, 926, 1651, 1677, 2013
BshNI	GGYRCC	2 cut(s)	361, 487
BsiEI	CGRYCG	1 cut(s)	150
BsiSI	CCGG	2 cut(s)	311, 1359
BslFI	GGGAC	3 cut(s)	176, 295, 1357
BslI	CCNNNNNNNGG	3 cut(s)	137, 1641, 2116
BsmAI	GTCTC	3 cut(s)	754, 1503, 1567
BsmFI	GGGAC	3 cut(s)	176, 295, 1357
BsmI	GAATGC	1 cut(s)	923
BsnI	GGCC	5 cut(s)	149, 926, 1651, 1677, 2013
Bsp143I	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
BspACI	CCGC	2 cut(s)	157, 1648
BspANI	GGCC	5 cut(s)	149, 926, 1651, 1677, 2013
BspCNI	CTCAG	3 cut(s)	834, 1432, 2086
BspFNI	CGCG	2 cut(s)	1580, 2115
BspLI	GGNNCC	9 cut(s)	72, 363, 489, 1190, 1302, 1345, 1598, 1623, 1652
BspMAI	CTGCAG	1 cut(s)	1878
BspMI	ACCTGC	1 cut(s)	127
BspPI	GGATC	2 cut(s)	148, 355
BspT107I	GGYRCC	2 cut(s)	361, 487
BspTI	CTTAAG	1 cut(s)	689
BsrI	ACTGG	4 cut(s)	278, 342, 1070, 1678
BssECI	CCNNGG	6 cut(s)	74, 290, 738, 1357, 1613, 1672
BssMI	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
BssSI	CACGAG	1 cut(s)	587
BssT1I	CCWWGG	1 cut(s)	738
Bst2BI	CACGAG	1 cut(s)	587
Bst2UI	CCWGG	5 cut(s)	292, 717, 1143, 1193, 1614
Bst4CI	ACNGT	4 cut(s)	128, 619, 1802, 2024
Bst6I	CTCTTC	3 cut(s)	633, 1071, 1402
BstAFI	CTTAAG	1 cut(s)	689
BstC8I	GCNNGC	4 cut(s)	221, 297, 1522, 1851
BstDEI	CTNAG	4 cut(s)	842, 1127, 1419, 2073
BstDSI	CCRYGG	1 cut(s)	74
BstF5I	GGATG	4 cut(s)	798, 880, 1066, 2106
BstFNI	CGCG	2 cut(s)	1580, 2115
BstHHI	GCGC	1 cut(s)	991
BstKTI	GATC	8 cut(s)	135, 156, 321, 350, 1405, 1411, 1719, 1774
BstMAI	GTCTC	3 cut(s)	754, 1503, 1567
BstMBI	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
BstMCI	CGRYCG	1 cut(s)	150
BstMWI	GCNNNNNNNGC	5 cut(s)	670, 1309, 1859, 1873, 1914
BstNI	CCWGG	5 cut(s)	292, 717, 1143, 1193, 1614
BstNSI	RCATGY	1 cut(s)	1524
BstPAI	GACNNNNGTC	1 cut(s)	2022
BstSCI	CCNGG	7 cut(s)	290, 309, 715, 1141, 1191, 1357, 1612
BstSFI	CTRYAG	3 cut(s)	300, 899, 1874
BstUI	CGCG	2 cut(s)	1580, 2115
BstV1I	GCAGC	4 cut(s)	1003, 1632, 1858, 1912
BstV2I	GAAGAC	1 cut(s)	849
BstX2I	RGATCY	1 cut(s)	153
BstXI	CCANNNNNNTGG	1 cut(s)	67
BstYI	RGATCY	1 cut(s)	153
BstZI	CGGCCG	1 cut(s)	147
BsuRI	GGCC	5 cut(s)	149, 926, 1651, 1677, 2013
BtgI	CCRYGG	1 cut(s)	74
BtsCI	GGATG	4 cut(s)	798, 880, 1066, 2106
BtsIMutI	CAGTG	2 cut(s)	349, 1248
BveI	ACCTGC	1 cut(s)	127
Cac8I	GCNNGC	4 cut(s)	221, 297, 1522, 1851
CaiI	CAGNNNCTG	1 cut(s)	1353
CfoI	GCGC	1 cut(s)	991
Cfr13I	GGNCC	5 cut(s)	116, 243, 1046, 1344, 1650
CseI	GACGC	1 cut(s)	225
Csp6I	GTAC	7 cut(s)	209, 253, 271, 362, 572, 1582, 1891
CspCI	CAANNNNNGTGG	2 cut(s)	325, 360
CviAII	CATG	5 cut(s)	511, 1108, 1490, 1521, 1525
CviQI	GTAC	7 cut(s)	209, 253, 271, 362, 572, 1582, 1891
DdeI	CTNAG	4 cut(s)	842, 1127, 1419, 2073
DpnI	GATC	8 cut(s)	134, 155, 320, 349, 1404, 1410, 1718, 1773
DpnII	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
DraI	TTTAAA	1 cut(s)	1572
EaeI	YGGCCR	2 cut(s)	147, 1675
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	3 cut(s)	633, 1071, 1402
EarI	CTCTTC	3 cut(s)	633, 1071, 1402
EciI	GGCGGA	1 cut(s)	146
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	1 cut(s)	738
Eco147I	AGGCCT	2 cut(s)	926, 2013
Eco47I	GGWCC	4 cut(s)	116, 243, 1046, 1344
Eco52I	CGGCCG	1 cut(s)	147
Eco57I	CTGAAG	2 cut(s)	1490, 1499
EcoRI	GAATTC	1 cut(s)	1277
EcoRII	CCWGG	5 cut(s)	290, 715, 1141, 1191, 1612
EcoT14I	CCWWGG	1 cut(s)	738
EcoT22I	ATGCAT	3 cut(s)	6, 681, 1526
ErhI	CCWWGG	1 cut(s)	738
FaeI	CATG	5 cut(s)	514, 1111, 1493, 1524, 1528
FalI	AAGNNNNNCTT	4 cut(s)	251, 283, 415, 447
FaqI	GGGAC	3 cut(s)	176, 295, 1357
FatI	CATG	5 cut(s)	510, 1107, 1489, 1520, 1524
FbaI	TGATCA	1 cut(s)	318
FblI	GTMKAC	2 cut(s)	54, 1806
Fnu4HI	GCNGC	5 cut(s)	992, 1646, 1649, 1847, 1901
FokI	GGATG	4 cut(s)	805, 887, 1053, 2093
Fsp4HI	GCNGC	5 cut(s)	992, 1646, 1649, 1847, 1901
FspBI	CTAG	6 cut(s)	237, 381, 821, 893, 1017, 1712
GlaI	GCGC	1 cut(s)	990
GluI	GCNGC	5 cut(s)	992, 1646, 1649, 1847, 1901
GsuI	CTGGAG	2 cut(s)	1624, 1930
HaeIII	GGCC	5 cut(s)	149, 926, 1651, 1677, 2013
HapII	CCGG	2 cut(s)	311, 1359
HgaI	GACGC	1 cut(s)	225
HhaI	GCGC	1 cut(s)	991
Hin1II	CATG	5 cut(s)	514, 1111, 1493, 1524, 1528
Hin6I	GCGC	1 cut(s)	989
HinP1I	GCGC	1 cut(s)	989
HincII	GTYRAC	1 cut(s)	1807
HindII	GTYRAC	1 cut(s)	1807
HindIII	AAGCTT	1 cut(s)	1181
HinfI	GANTC	8 cut(s)	189, 474, 720, 782, 827, 844, 868, 1131
HpaII	CCGG	2 cut(s)	311, 1359
HphI	GGTGA	1 cut(s)	431
Hpy166II	GTNNAC	7 cut(s)	55, 253, 451, 502, 574, 1055, 1807
Hpy188I	TCNGA	9 cut(s)	132, 215, 357, 626, 702, 725, 1365, 1402, 1470
Hpy8I	GTNNAC	7 cut(s)	55, 253, 451, 502, 574, 1055, 1807
HpyCH4III	ACNGT	4 cut(s)	128, 619, 1802, 2024
HpyCH4IV	ACGT	3 cut(s)	207, 1465, 1589
HpyF10VI	GCNNNNNNNGC	5 cut(s)	670, 1309, 1859, 1873, 1914
HpyF3I	CTNAG	4 cut(s)	842, 1127, 1419, 2073
HpySE526I	ACGT	3 cut(s)	207, 1465, 1589
Hsp92II	CATG	5 cut(s)	514, 1111, 1493, 1524, 1528
HspAI	GCGC	1 cut(s)	989
KpnI	GGTACC	1 cut(s)	365
Ksp22I	TGATCA	1 cut(s)	318
Kzo9I	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
LmnI	GCTCC	6 cut(s)	469, 1188, 1300, 1602, 1621, 1701
Lsp1109I	GCAGC	4 cut(s)	1003, 1632, 1858, 1912
LweI	GCATC	7 cut(s)	13, 688, 714, 1003, 1075, 1258, 1518
MaeI	CTAG	6 cut(s)	237, 381, 821, 893, 1017, 1712
MaeII	ACGT	3 cut(s)	207, 1465, 1589
MaeIII	GTNAC	2 cut(s)	972, 1787
MalI	GATC	8 cut(s)	134, 155, 320, 349, 1404, 1410, 1718, 1773
MboI	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
MfeI	CAATTG	1 cut(s)	951
MflI	RGATCY	1 cut(s)	153
MluI	ACGCGT	1 cut(s)	2113
MlyI	GAGTC	3 cut(s)	198, 853, 1125
MmeI	TCCRAC	1 cut(s)	2134
Mph1103I	ATGCAT	3 cut(s)	6, 681, 1526
MroXI	GAANNNNTTC	1 cut(s)	263
MseI	TTAA	8 cut(s)	368, 690, 797, 851, 1116, 1179, 1571, 1629
MslI	CAYNNNNRTG	2 cut(s)	509, 515
MspCI	CTTAAG	1 cut(s)	689
MspI	CCGG	2 cut(s)	311, 1359
MspR9I	CCNGG	7 cut(s)	292, 311, 717, 1143, 1193, 1359, 1614
MunI	CAATTG	1 cut(s)	951
Mva1269I	GAATGC	1 cut(s)	923
MvaI	CCWGG	5 cut(s)	292, 717, 1143, 1193, 1614
MvnI	CGCG	2 cut(s)	1580, 2115
MwoI	GCNNNNNNNGC	5 cut(s)	670, 1309, 1859, 1873, 1914
NciI	CCSGG	2 cut(s)	311, 1359
NdeII	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
NlaIII	CATG	5 cut(s)	514, 1111, 1493, 1524, 1528
NlaIV	GGNNCC	9 cut(s)	72, 363, 489, 1190, 1302, 1345, 1598, 1623, 1652
NmeAIII	GCCGAG	4 cut(s)	125, 175, 1653, 1660
NmuCI	GTSAC	2 cut(s)	972, 1787
NsiI	ATGCAT	3 cut(s)	6, 681, 1526
NspI	RCATGY	1 cut(s)	1524
PaeI	GCATGC	1 cut(s)	1524
PceI	AGGCCT	2 cut(s)	926, 2013
PctI	GAATGC	1 cut(s)	923
PdmI	GAANNNNTTC	1 cut(s)	263
PfeI	GAWTC	5 cut(s)	474, 720, 782, 827, 868
PflFI	GACNNNGTC	1 cut(s)	970
PflMI	CCANNNNNTGG	1 cut(s)	2116
PfoI	TCCNGGA	1 cut(s)	715
PkrI	GCNGC	5 cut(s)	993, 1647, 1650, 1848, 1902
PleI	GAGTC	3 cut(s)	197, 852, 1125
PpsI	GAGTC	3 cut(s)	197, 852, 1125
PshAI	GACNNNNGTC	1 cut(s)	2022
PshBI	ATTAAT	1 cut(s)	851
Psp1406I	AACGTT	1 cut(s)	1589
Psp6I	CCWGG	5 cut(s)	290, 715, 1141, 1191, 1612
PspGI	CCWGG	5 cut(s)	290, 715, 1141, 1191, 1612
PspN4I	GGNNCC	9 cut(s)	72, 363, 489, 1190, 1302, 1345, 1598, 1623, 1652
PspPI	GGNCC	5 cut(s)	116, 243, 1046, 1344, 1650
PsrI	GAACNNNNNNTAC	2 cut(s)	254, 286
PstI	CTGCAG	1 cut(s)	1878
PstNI	CAGNNNCTG	1 cut(s)	1353
PsuI	RGATCY	1 cut(s)	153
PsyI	GACNNNGTC	1 cut(s)	970
RsaI	GTAC	7 cut(s)	210, 254, 272, 363, 573, 1583, 1892
RsaNI	GTAC	7 cut(s)	209, 253, 271, 362, 572, 1582, 1891
RseI	CAYNNNNRTG	2 cut(s)	509, 515
SalI	GTCGAC	1 cut(s)	1805
SaqAI	TTAA	8 cut(s)	368, 690, 797, 851, 1116, 1179, 1571, 1629
SatI	GCNGC	5 cut(s)	992, 1646, 1649, 1847, 1901
Sau3AI	GATC	8 cut(s)	132, 153, 318, 347, 1402, 1408, 1716, 1771
Sau96I	GGNCC	5 cut(s)	116, 243, 1046, 1344, 1650
SchI	GAGTC	3 cut(s)	198, 853, 1125
ScrFI	CCNGG	7 cut(s)	292, 311, 717, 1143, 1193, 1359, 1614
SfaNI	GCATC	7 cut(s)	13, 688, 714, 1003, 1075, 1258, 1518
SfcI	CTRYAG	3 cut(s)	300, 899, 1874
SinI	GGWCC	4 cut(s)	116, 243, 1046, 1344
SmiMI	CAYNNNNRTG	2 cut(s)	509, 515
SmlI	CTYRAG	3 cut(s)	98, 689, 1094
SmoI	CTYRAG	3 cut(s)	98, 689, 1094
SphI	GCATGC	1 cut(s)	1524
SseBI	AGGCCT	2 cut(s)	926, 2013
SsiI	CCGC	2 cut(s)	157, 1648
SspI	AATATT	1 cut(s)	66
SspMI	CTAG	6 cut(s)	237, 381, 821, 893, 1017, 1712
StuI	AGGCCT	2 cut(s)	926, 2013
StyD4I	CCNGG	7 cut(s)	290, 309, 715, 1141, 1191, 1357, 1612
StyI	CCWWGG	1 cut(s)	738
TaaI	ACNGT	4 cut(s)	128, 619, 1802, 2024
TaiI	ACGT	3 cut(s)	210, 1468, 1592
TaqI	TCGA	6 cut(s)	414, 477, 1306, 1719, 1806, 2016
TatI	WGTACW	1 cut(s)	270
TauI	GCSGC	1 cut(s)	1651
TfiI	GAWTC	5 cut(s)	474, 720, 782, 827, 868
Tru1I	TTAA	8 cut(s)	368, 690, 797, 851, 1116, 1179, 1571, 1629
Tru9I	TTAA	8 cut(s)	368, 690, 797, 851, 1116, 1179, 1571, 1629
TscAI	CASTG	2 cut(s)	349, 1255
TseFI	GTSAC	2 cut(s)	972, 1787
TseI	GCWGC	4 cut(s)	991, 1645, 1846, 1900
Tsp45I	GTSAC	2 cut(s)	972, 1787
TspDTI	ATGAA	6 cut(s)	28, 527, 1229, 1290, 1403, 1823
TspGWI	ACGGA	2 cut(s)	63, 805
TspRI	CASTG	2 cut(s)	349, 1255
Tth111I	GACNNNGTC	1 cut(s)	970
Van91I	CCANNNNNTGG	1 cut(s)	2116
Vha464I	CTTAAG	1 cut(s)	689
VpaK11BI	GGWCC	4 cut(s)	116, 243, 1046, 1344
VspI	ATTAAT	1 cut(s)	851
XapI	RAATTY	8 cut(s)	47, 726, 1081, 1197, 1277, 1366, 1574, 1931
XceI	RCATGY	1 cut(s)	1524
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XmiI	GTMKAC	2 cut(s)	54, 1806
XmnI	GAANNNNTTC	1 cut(s)	263
XspI	CTAG	6 cut(s)	237, 381, 821, 893, 1017, 1712
Zsp2I	ATGCAT	3 cut(s)	6, 681, 1526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.