MD15G1214600.v1.1

Mechanosensitive ion channel protein 10-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
17245349 .. 17248015
2667 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1214600.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGAAAAAGTTGGCATTAATTGAGTTGATTGCATTTGTTTGCATTGTTGTGTTTTTGATTGCTTGCTTAACTGCTCTTAAGTTGAAAAAAAAGATGTATTGGGGGTTGGAATTGTGGAAATGGTGTGTCTTGGTGTTGGTTGTTTTGTGTGGTAGATTGGTCACAGAATGGTTTATCAATGTTCTGGTTTTCGTGATTGAGTTCAACCTTTTGCTTAAGAAGAATGTTTTGTATTTTGTTTACGGGTTGAAGAGAAGTGTACAGATTTTTATTTGGTTGGGTTTGGTTCTTCTGGCTTGGAGTTTGTTGTTTGACCGCGGAGTGAAGAGGTCTAGAAAAACCTGTAGGATCCTAGGTTATGTTGCACAAGGTCTGGCTTCGTGCCTAATTGGAGCGGCCATAGGGCTGGTGAAGAATTTGTCTGTCAAAGTAGTAGCTTCTTCATTCCAATGCAATAGATTCTTTGATCGCATTCAAGAATCGATATTTCATCAGTATGTTCTCCGCACCCTTTCGGGGCCTCCACTGATGGAAATGGCAGAAAGAGTTGGGAGGATCCCAAGTAGCGGTCAGTTGAGTTTCAAACATTTGAAGGGAGGGAAAAAGGAGGGGAAGGAAGGGGCCAAAGAGCAGGTGATTGATGTAGAAAAGCCCAAAAAGATGAACCAGAAGAAAATTTCTGCCTGGACCCTGAAAGTGCTGGTTAATGTAGTAAGGAGATCGGGATTATCTACCATCTCCAACACACTTGATAGTCTTGATGATGAGGAGAGTGAGCAGAAAGGTAAGGAGATTACTAGTGAGTGGGAAGCAAAGGTTGTGGCTTATGATATTTTCCTGAATGTCACCAAGCGTAGCAACAAGTACATTGAGGAAGATGACCTCTTGCGCTTCATGAAAAAGGAGGAGGTCGACATTGTTTTACCTCTCTTTGACGGGGTAGCAGAAACTGGCAAGATCAAGAGAAAAGCTTTGAAGAACTTGCTGGTGAATGTTTACCTTGAAAGCAAATCACTGGCACGTTCCTTAAATGACATTAAAACAGCAATAGAGAAGCTGAATAGGCTTGCCTCAGGAGTTTTGCTTCTGGTGATCATTACCATTTTACTAGTGGTGTTTGTATTTGGTAATACTGCTAAAACCGTGTTTGAAGCGATCATATTCGTCTTTGTGATGCACCCTTTTGATGTAGGGGACCGTTGTTACTGGCTAGTAAACCCATCAGCAACTTCTACTACGGTTGAGACTACTGTGGCTCTGAAAGCCAGAATAAATGAGTACTTGGACAGCAAGACTCAGCACTGGCTCCCTGGCCATAGCGTGGTGGTTAAGGATATTGAGGACGTTAACAGAATGAAAATGGCTCTTTATGTTACACATACCATAAACTTTCAGAACTATGGCGACAAGACCAATCGGAGATCCGATTTGGTCTTAGAGCTGAAGAAAATACTCGAAGATCTTGGTATAAAATATCACCTGCTGCCTCAAGAAGTTCATCTCCGCTATGTCAGATCATCCACTGCAGAACTTCCTCCCACGTGGCGGTGA

Protein Analysis

517

Amino Acids

58.89

Weight (kDa)

9.52

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 622, 1488
Acc36I ACCTGC 2 cut(s) 622, 1488
AccB7I CCANNNNNTGG 1 cut(s) 1321
AccBSI CCGCTC 1 cut(s) 395
AccI GTMKAC 1 cut(s) 912
AccII CGCG 1 cut(s) 318
AciI CCGC 7 cut(s) 316, 318, 395, 505, 567, 1504, 1546
AclWI GGATC 5 cut(s) 343, 356, 550, 563, 1416
AcoI YGGCCR 2 cut(s) 396, 1312
AcsI RAATTY 2 cut(s) 415, 675
AcuI CTGAAG 1 cut(s) 1463
AcvI CACGTG 1 cut(s) 1542
AfaI GTAC 3 cut(s) 261, 866, 1280
AfiI CCNNNNNNNGG 4 cut(s) 516, 566, 1321, 1545
AflII CTTAAG 2 cut(s) 77, 215
AgsI TTSAA 9 cut(s) 85, 205, 250, 476, 583, 592, 976, 1004, 1151
AhlI ACTAGT 2 cut(s) 797, 1108
AjnI CCWGG 2 cut(s) 683, 1309
AluBI AGCT 4 cut(s) 437, 971, 1057, 1441
AluI AGCT 4 cut(s) 437, 971, 1057, 1441
Alw26I GTCTC 1 cut(s) 1238
AlwI GGATC 5 cut(s) 343, 356, 550, 563, 1416
AlwNI CAGNNNCTG 1 cut(s) 950
AoxI GGCC 4 cut(s) 396, 518, 621, 1312
ApeKI GCWGC 1 cut(s) 1483
ApoI RAATTY 2 cut(s) 415, 675
AseI ATTAAT 1 cut(s) 17
AspA2I CCTAGG 1 cut(s) 352
AspLEI GCGC 1 cut(s) 891
AspS9I GGNCC 4 cut(s) 518, 621, 687, 1195
AsuHPI GGTGA 6 cut(s) 421, 646, 838, 1000, 1102, 1469
AvaII GGWCC 2 cut(s) 687, 1195
AvrII CCTAGG 1 cut(s) 352
AxyI CCTNAGG 1 cut(s) 1072
BalI TGGCCA 1 cut(s) 1314
BamHI GGATCC 2 cut(s) 348, 555
BbrPI CACGTG 1 cut(s) 1542
BbvI GCAGC 1 cut(s) 1470
BccI CCATC 3 cut(s) 523, 743, 1228
BciT130I CCWGG 2 cut(s) 685, 1311
BclI TGATCA 1 cut(s) 1092
BcoDI GTCTC 1 cut(s) 1238
BcuI ACTAGT 2 cut(s) 797, 1108
BfaI CTAG 5 cut(s) 333, 353, 798, 1109, 1211
BfmI CTRYAG 2 cut(s) 343, 1524
BfrI CTTAAG 2 cut(s) 77, 215
BfuAI ACCTGC 2 cut(s) 622, 1488
BglII AGATCT 1 cut(s) 1459
BisI GCNGC 2 cut(s) 396, 1484
BlnI CCTAGG 1 cut(s) 352
BlsI GCNGC 2 cut(s) 397, 1485
BmcAI AGTACT 1 cut(s) 1280
Bme1390I CCNGG 2 cut(s) 685, 1311
Bme18I GGWCC 2 cut(s) 687, 1195
BmgT120I GGNCC 4 cut(s) 518, 621, 687, 1195
BmiI GGNNCC 7 cut(s) 350, 519, 557, 622, 689, 1196, 1307
BmrFI CCNGG 2 cut(s) 685, 1311
BmsI GCATC 1 cut(s) 1164
BpuEI CTTGAG 1 cut(s) 1473
Bsa29I ATCGAT 1 cut(s) 482
BsaAI YACGTR 1 cut(s) 1542
BsaJI CCNNGG 3 cut(s) 316, 352, 1309
Bsc4I CCNNNNNNNGG 4 cut(s) 516, 566, 1321, 1545
Bse1I ACTGG 4 cut(s) 955, 1020, 1211, 1307
Bse21I CCTNAGG 1 cut(s) 1072
BseBI CCWGG 2 cut(s) 685, 1311
BseCI ATCGAT 1 cut(s) 482
BseDI CCNNGG 3 cut(s) 316, 352, 1309
BseGI GGATG 1 cut(s) 1517
BseLI CCNNNNNNNGG 4 cut(s) 516, 566, 1321, 1545
BseMII CTCAG 2 cut(s) 1086, 1310
BseNI ACTGG 4 cut(s) 955, 1020, 1211, 1307
BseRI GAGGAG 2 cut(s) 782, 920
BseXI GCAGC 1 cut(s) 1470
Bsh1236I CGCG 1 cut(s) 318
BshFI GGCC 4 cut(s) 398, 520, 623, 1314
BshVI ATCGAT 1 cut(s) 482
BslFI GGGAC 1 cut(s) 1208
BslI CCNNNNNNNGG 4 cut(s) 516, 566, 1321, 1545
BsmAI GTCTC 1 cut(s) 1238
BsmFI GGGAC 1 cut(s) 1208
BsmI GAATGC 1 cut(s) 471
BsnI GGCC 4 cut(s) 398, 520, 623, 1314
Bsp1407I TGTACA 1 cut(s) 259
BspACI CCGC 7 cut(s) 316, 318, 395, 505, 567, 1504, 1546
BspANI GGCC 4 cut(s) 398, 520, 623, 1314
BspCNI CTCAG 2 cut(s) 1085, 1309
BspDI ATCGAT 1 cut(s) 482
BspFNI CGCG 1 cut(s) 318
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 7 cut(s) 350, 519, 557, 622, 689, 1196, 1307
BspMAI CTGCAG 1 cut(s) 1528
BspMI ACCTGC 2 cut(s) 622, 1488
BspPI GGATC 5 cut(s) 343, 356, 550, 563, 1416
BspTI CTTAAG 2 cut(s) 77, 215
BsrBI CCGCTC 1 cut(s) 395
BsrGI TGTACA 1 cut(s) 259
BsrI ACTGG 4 cut(s) 955, 1020, 1211, 1307
BssECI CCNNGG 3 cut(s) 316, 352, 1309
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 2 cut(s) 685, 1311
Bst4CI ACNGT 4 cut(s) 1144, 1199, 1240, 1252
Bst6I CTCTTC 2 cut(s) 245, 320
BstAFI CTTAAG 2 cut(s) 77, 215
BstAUI TGTACA 1 cut(s) 259
BstBAI YACGTR 1 cut(s) 1542
BstC8I GCNNGC 2 cut(s) 64, 1068
BstDEI CTNAG 3 cut(s) 1072, 1296, 1435
BstDSI CCRYGG 1 cut(s) 316
BstF5I GGATG 1 cut(s) 1517
BstFNI CGCG 1 cut(s) 318
BstHHI GCGC 1 cut(s) 891
BstMAI GTCTC 1 cut(s) 1238
BstMWI GCNNNNNNNGC 2 cut(s) 1063, 1262
BstNI CCWGG 2 cut(s) 685, 1311
BstSCI CCNGG 2 cut(s) 683, 1309
BstSFI CTRYAG 2 cut(s) 343, 1524
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 1 cut(s) 1470
BstX2I RGATCY 4 cut(s) 348, 555, 1421, 1459
BstXI CCANNNNNNTGG 1 cut(s) 406
BstYI RGATCY 4 cut(s) 348, 555, 1421, 1459
Bsu15I ATCGAT 1 cut(s) 482
Bsu36I CCTNAGG 1 cut(s) 1072
BsuRI GGCC 4 cut(s) 398, 520, 623, 1314
BsuTUI ATCGAT 1 cut(s) 482
BtgI CCRYGG 1 cut(s) 316
BtsCI GGATG 1 cut(s) 1517
BtsI GCAGTG 1 cut(s) 1521
BtsIMutI CAGTG 4 cut(s) 524, 1013, 1300, 1521
BveI ACCTGC 2 cut(s) 622, 1488
Cac8I GCNNGC 2 cut(s) 64, 1068
CaiI CAGNNNCTG 1 cut(s) 950
CciI TCATGA 1 cut(s) 894
CfoI GCGC 1 cut(s) 891
Cfr13I GGNCC 4 cut(s) 518, 621, 687, 1195
Cfr42I CCGCGG 1 cut(s) 319
ClaI ATCGAT 1 cut(s) 482
Csp6I GTAC 3 cut(s) 260, 865, 1279
CspCI CAANNNNNGTGG 2 cut(s) 801, 836
CviAII CATG 1 cut(s) 895
CviQI GTAC 3 cut(s) 260, 865, 1279
DdeI CTNAG 3 cut(s) 1072, 1296, 1435
EaeI YGGCCR 2 cut(s) 396, 1312
Eam1104I CTCTTC 2 cut(s) 245, 320
EarI CTCTTC 2 cut(s) 245, 320
Eco130I CCWWGG 1 cut(s) 352
Eco47I GGWCC 2 cut(s) 687, 1195
Eco57I CTGAAG 1 cut(s) 1463
Eco72I CACGTG 1 cut(s) 1542
Eco81I CCTNAGG 1 cut(s) 1072
EcoO109I RGGNCCY 1 cut(s) 518
EcoRII CCWGG 2 cut(s) 683, 1309
EcoT14I CCWWGG 1 cut(s) 352
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 1 cut(s) 898
FaqI GGGAC 1 cut(s) 1208
FatI CATG 1 cut(s) 894
FbaI TGATCA 1 cut(s) 1092
FblI GTMKAC 1 cut(s) 912
Fnu4HI GCNGC 2 cut(s) 396, 1484
FokI GGATG 1 cut(s) 1504
Fsp4HI GCNGC 2 cut(s) 396, 1484
FspBI CTAG 5 cut(s) 333, 353, 798, 1109, 1211
GlaI GCGC 1 cut(s) 890
GluI GCNGC 2 cut(s) 396, 1484
HaeIII GGCC 4 cut(s) 398, 520, 623, 1314
HhaI GCGC 1 cut(s) 891
Hin1II CATG 1 cut(s) 898
Hin6I GCGC 1 cut(s) 889
HinP1I GCGC 1 cut(s) 889
HincII GTYRAC 2 cut(s) 913, 1348
HindII GTYRAC 2 cut(s) 913, 1348
HindIII AAGCTT 1 cut(s) 969
HinfI GANTC 3 cut(s) 459, 479, 1294
HpaI GTTAAC 1 cut(s) 1348
HphI GGTGA 6 cut(s) 421, 646, 838, 1000, 1102, 1469
Hpy166II GTNNAC 6 cut(s) 241, 260, 913, 997, 1216, 1348
Hpy188I TCNGA 5 cut(s) 1260, 1395, 1419, 1426, 1514
Hpy8I GTNNAC 6 cut(s) 241, 260, 913, 997, 1216, 1348
HpyAV CCTTC 3 cut(s) 586, 607, 611
HpyCH4III ACNGT 4 cut(s) 1144, 1199, 1240, 1252
HpyCH4IV ACGT 3 cut(s) 1021, 1344, 1541
HpyCH4V TGCA 6 cut(s) 32, 42, 365, 453, 1177, 1526
HpyF10VI GCNNNNNNNGC 2 cut(s) 1063, 1262
HpyF3I CTNAG 3 cut(s) 1072, 1296, 1435
HpySE526I ACGT 3 cut(s) 1021, 1344, 1541
Hsp92II CATG 1 cut(s) 898
HspAI GCGC 1 cut(s) 889
Ksp22I TGATCA 1 cut(s) 1092
KspAI GTTAAC 1 cut(s) 1348
KspI CCGCGG 1 cut(s) 319
LmnI GCTCC 2 cut(s) 392, 1311
Lsp1109I GCAGC 1 cut(s) 1470
LweI GCATC 1 cut(s) 1164
MaeI CTAG 5 cut(s) 333, 353, 798, 1109, 1211
MaeII ACGT 3 cut(s) 1021, 1344, 1541
MaeIII GTNAC 4 cut(s) 160, 844, 1202, 1372
MbiI CCGCTC 1 cut(s) 395
MflI RGATCY 4 cut(s) 348, 555, 1421, 1459
MlsI TGGCCA 1 cut(s) 1314
MluCI AATT 5 cut(s) 18, 110, 387, 415, 675
MluNI TGGCCA 1 cut(s) 1314
MlyI GAGTC 1 cut(s) 1288
MmeI TCCRAC 2 cut(s) 87, 765
Mox20I TGGCCA 1 cut(s) 1314
MscI TGGCCA 1 cut(s) 1314
MseI TTAA 9 cut(s) 17, 68, 78, 216, 705, 1028, 1038, 1329, 1347
MslI CAYNNNNRTG 3 cut(s) 47, 448, 495
Msp20I TGGCCA 1 cut(s) 1314
MspA1I CMGCKG 1 cut(s) 318
MspCI CTTAAG 2 cut(s) 77, 215
MspR9I CCNGG 2 cut(s) 685, 1311
Mva1269I GAATGC 1 cut(s) 471
MvaI CCWGG 2 cut(s) 685, 1311
MvnI CGCG 1 cut(s) 318
MwoI GCNNNNNNNGC 2 cut(s) 1063, 1262
NlaIII CATG 1 cut(s) 898
NlaIV GGNNCC 7 cut(s) 350, 519, 557, 622, 689, 1196, 1307
NmuCI GTSAC 2 cut(s) 160, 844
PagI TCATGA 1 cut(s) 894
PaqCI CACCTGC 2 cut(s) 622, 1488
PctI GAATGC 1 cut(s) 471
PfeI GAWTC 2 cut(s) 459, 479
PflMI CCANNNNNTGG 1 cut(s) 1321
PkrI GCNGC 2 cut(s) 397, 1485
PleI GAGTC 1 cut(s) 1288
PmaCI CACGTG 1 cut(s) 1542
PmlI CACGTG 1 cut(s) 1542
PpsI GAGTC 1 cut(s) 1288
Ppu21I YACGTR 1 cut(s) 1542
PshBI ATTAAT 1 cut(s) 17
Psp6I CCWGG 2 cut(s) 683, 1309
PspCI CACGTG 1 cut(s) 1542
PspGI CCWGG 2 cut(s) 683, 1309
PspN4I GGNNCC 7 cut(s) 350, 519, 557, 622, 689, 1196, 1307
PspPI GGNCC 4 cut(s) 518, 621, 687, 1195
PstI CTGCAG 1 cut(s) 1528
PstNI CAGNNNCTG 1 cut(s) 950
PsuI RGATCY 4 cut(s) 348, 555, 1421, 1459
RsaI GTAC 3 cut(s) 261, 866, 1280
RsaNI GTAC 3 cut(s) 260, 865, 1279
RseI CAYNNNNRTG 3 cut(s) 47, 448, 495
SacII CCGCGG 1 cut(s) 319
SalI GTCGAC 1 cut(s) 911
SaqAI TTAA 9 cut(s) 17, 68, 78, 216, 705, 1028, 1038, 1329, 1347
SatI GCNGC 2 cut(s) 396, 1484
Sau96I GGNCC 4 cut(s) 518, 621, 687, 1195
ScaI AGTACT 1 cut(s) 1280
SchI GAGTC 1 cut(s) 1288
ScrFI CCNGG 2 cut(s) 685, 1311
SfaNI GCATC 1 cut(s) 1164
SfcI CTRYAG 2 cut(s) 343, 1524
Sfr303I CCGCGG 1 cut(s) 319
SgrBI CCGCGG 1 cut(s) 319
SinI GGWCC 2 cut(s) 687, 1195
SmiMI CAYNNNNRTG 3 cut(s) 47, 448, 495
SmlI CTYRAG 3 cut(s) 77, 215, 1488
SmoI CTYRAG 3 cut(s) 77, 215, 1488
SpeI ACTAGT 2 cut(s) 797, 1108
Sse9I AATT 5 cut(s) 18, 110, 387, 415, 675
SsiI CCGC 7 cut(s) 316, 318, 395, 505, 567, 1504, 1546
SspMI CTAG 5 cut(s) 333, 353, 798, 1109, 1211
StyD4I CCNGG 2 cut(s) 683, 1309
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 4 cut(s) 1144, 1199, 1240, 1252
TaiI ACGT 3 cut(s) 1024, 1347, 1544
TaqI TCGA 3 cut(s) 482, 912, 1455
TasI AATT 5 cut(s) 18, 110, 387, 415, 675
TatI WGTACW 3 cut(s) 259, 864, 1278
TauI GCSGC 1 cut(s) 398
TfiI GAWTC 2 cut(s) 459, 479
Tru1I TTAA 9 cut(s) 17, 68, 78, 216, 705, 1028, 1038, 1329, 1347
Tru9I TTAA 9 cut(s) 17, 68, 78, 216, 705, 1028, 1038, 1329, 1347
TscAI CASTG 4 cut(s) 531, 1020, 1307, 1528
TseFI GTSAC 2 cut(s) 160, 844
TseI GCWGC 1 cut(s) 1483
Tsp45I GTSAC 2 cut(s) 160, 844
TspDTI ATGAA 8 cut(s) 17, 432, 479, 677, 883, 911, 1370, 1487
TspRI CASTG 4 cut(s) 531, 1020, 1307, 1528
Van91I CCANNNNNTGG 1 cut(s) 1321
Vha464I CTTAAG 2 cut(s) 77, 215
VpaK11BI GGWCC 2 cut(s) 687, 1195
VspI ATTAAT 1 cut(s) 17
XapI RAATTY 2 cut(s) 415, 675
XbaI TCTAGA 1 cut(s) 332
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmaJI CCTAGG 1 cut(s) 352
XmiI GTMKAC 1 cut(s) 912
XspI CTAG 5 cut(s) 333, 353, 798, 1109, 1211
ZrmI AGTACT 1 cut(s) 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.