Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003454

Physical Location & Seq

Genomic Coordinates Forward (+)

18624301 .. 18627192

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1228400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGAGGGGAGCTGTTTTCGTAGCGGTTGCTGCAGCTATTGGGAACCTGTTGCAAGGATGGGATAATTCAGTCATTGCTGGCATTGTTAATAATTCTATTAATTCTCTATTTGTCCCACAAAATGTTGCAGGATCTGTTCTTTATATTAAAAAGGAATTTGAATTGGAAAGTGAACCAACATTTGAAGGGCTAATCCCAGCCTCATCGCTCATCGGAGCCACATTCATAACAACATTCTCTGGACCGGCATCAGACTGGCTAGGTCGGCGTACAATGCTAATCATTTCATCGGTTCTTTTCTTCATTAGTGGTCTGGTAATGTTGTTGTCCCCCAATGTTTACGTCTTACTTTTCGCGAGGCTACTAGACGGATTTGGAACTGGTCTGGCTGTTACACTTGTGCCTGCCTATATATCTGAGATAGCGCCGCCTGATATAAGAGGACGGTTGAATACCCTTCCACAGTTCATAGGCTCTGGTGGGATGTTCTTGTCCTATTGCATGGTGTTTGGACTGTCACTGATGGATTCGCCGAACTGGAGATTAATGCTAGGAGTTGTTTCCATTCCATCTCTACTTTATTTCGCTTTGACGGTGTTTTACCTGCCCGAATCCCCTAGATGGCTTGTGAGCAAGGGTCGAATCCTCGAGGCCAAACAAGTTCTGCAAAGACTTAATGGCAGGGAAGATGTTTCAGGTGAGTTAGCTTTGCTAGTTGAGGGTCTTAGCACTGGCAAAGAGACATCATTGGAAGAGTTCATCATTAGTCCAGCCAATGTGCTTACTGAAAATCAGGCAAATCAAATACGGCTCTATGGTCCTCAAGAGGGCTTATCATATATCGCCAAGCCTGCAACTGGACAGAGTTTAATATCTCACCATGGGAGCGCGTTGAACCAAATCATCCCTCTCGTAGATCCTCTGGTCACTCTCTTTAGCAGTGTCCACGAGAAGATTTCCGAAAAAGGAAGTAAAGGCAGCATGCTTTATCTGAATCTAGGCAGCAATTTGAATGTCGGGGAGTATCATAATAAAAATGCACACTGGGACATGGAGAGCCAGACGGATGGTGAGGATCACGAATCTGAAGCCTCTGGGGCTTATTGCGATGACAGCTTGAGAAGTCCATTGATCTCACGCCAAACAACGAGCATGGGAACGCCTAGGTCTGGCGGTAGTGCTTTAGGTGTGAGATGCAATACAATCTTGATGCAAGGAAATGTAGAAGCTAGTGAGGCAGCTTTCAGTAGTAGTATGGACATAGGTGGAGGCTGGCAGCTAGCTTATAAATATTCTGACCGAGTAGGCGAAGACGGAAAGAATGAAGGAGGATTGCAAAGAGTGTATTTGCACCAGGATAGTGCACTTGGGTGTCGGCCTGCCTCGGTTGTTTCAGTTTCTGGTGTAAGGCAAGAAAGTGAACTCATTCATGCTGCTGCTCTGGTTAGCCAACCTGCTGTTTCTGCCAAGGAACTAACAAGTCTGCATTCTCTTCGACCAGAAGTGGCTCATCCATCAGAAGCTGTTGTTAAAAGGCCGACATGGGGAGATCTTCTTGAACCGGGAGTAAAGCGTGCATTAGTTGTTGGGATTGGACTTCAAATTCTTCAGCAGATTTCCGGCATAAATGGTGTTCTCTACTACACTCCTCAGTTCTATCAGCAAGACGGGGTCTCCGTTCTTCTATCTAATATAGGGTTGAATCCGACATCTGCATCTCTCTTCTTAAGTGCCATCACAACATTCTTAATGCTTCCTTGCATTGCTACTTCCATGTGGCTAATGGATATAGCCGGCAGAAGGCCATTGCTGCTCTCCACATTACCAATCCTGATATTGTCCCTTGCTCTACTAGTACTTGTCAACATTGTCAACTTGGGAACTGTTGTGAACGCAACAATCTCCACAGCCAGTGTTGTGGTCTATCTCTGCTGCTTCGTCATGGCGTTTGGAGTAATCCCGAACATTCTATGCGCAGAGATCTTCCCTACGCGTGTCCGCGGCCTTTGCATTGCCATTTGTGCCCTAGCACTCTGGATTGGAGACATCATCATCACTTACTCATTTCCTGTCCTGCTCTCTTCTGTTGGATTCACCGGTGTCTTCGGCATCTATGTTGTCGGGTGCATCGTTTCCTGGATATTTGTTTACTTGAAGGTGCCTGAGACGAAGGGCATGCCTTTAGAAGTTATATCCGAGTTCTTTGCTGCAGGTGTAAAACCAGCTGCTGCTGATTCATCTGCGGATTCCAATGATAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

754

Amino Acids

80.73

Weight (kDa)

5.3

Isoelectric Point (pI)

41.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	7 - 253	2.2e-52	Sugar (and other) transporter
MFS_1	PF07690	56 - 211	1e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	513 - 735	1.9e-36	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003454)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10120 FvH4_2g16850 FvH4_5g25950
malus_domestica	MD02G1109600.v1.1 MD02G1109800.v1.1 MD02G1112000.v1.1 MD02G1112900.v1.1 MD15G1228400.v1.1
prunus_persica	Prupe.7G185700_v2.0.a1 Prupe.7G185800_v2.0.a1 Prupe.7G185800_v2.0.a1
pyrus_communis	pycom15g20350
rosa_chinensis	RchiOBHm_Chr2g0096891 RchiOBHm_Chr4g0410591 RchiOBHm_Chr5g0025901
rosa_laevigata	RLG00000008254 RLG00000016680
rosa_multiflora	Rmu_co8305667.1_g000001 Rmu_ssc0000215.1_g000005
rosa_roxburghii	Rroxscaffold_1G00071210 Rroxscaffold_2G00145180
rosa_rugosa	Rorug02G0061700 Rorug02G0061700
rosa_samantha	Rh2AG109600 Rh2BG111500 Rh2CG113600 Rh2DG112700 Rh4CG174500 Rh5CG197800 Rh5DG180200 Rh6BG252000 Rh7AG299900 Rh7CG318500 Rh7DG300100
rosa_wichuraiana	Rw2G008460 Rw5G016470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
AarI	CACCTGC	1 cut(s)	2201
AbsI	CCTCGAGG	1 cut(s)	647
Acc16I	TGCGCA	1 cut(s)	1975
Acc36I	ACCTGC	3 cut(s)	612, 1462, 2201
AccB1I	GGYRCC	1 cut(s)	2158
AccII	CGCG	4 cut(s)	356, 890, 1993, 2001
AciI	CCGC	6 cut(s)	23, 428, 1173, 1999, 2001, 2243
AclWI	GGATC	3 cut(s)	139, 911, 1083
AcsI	RAATTY	2 cut(s)	155, 1602
AcuI	CTGAAG	2 cut(s)	1107, 1592
AfaI	GTAC	2 cut(s)	271, 1857
AfiI	CCNNNNNNNGG	6 cut(s)	621, 827, 857, 1169, 1544, 1800
AflII	CTTAAG	1 cut(s)	1726
AflIII	ACRYGT	1 cut(s)	1991
AgeI	ACCGGT	1 cut(s)	2096
AgsI	TTSAA	9 cut(s)	161, 185, 451, 895, 1012, 1559, 1601, 1702, 2155
AhlI	ACTAGT	1 cut(s)	1852
AjnI	CCWGG	2 cut(s)	1353, 2135
AleI	CACNNNNGTG	1 cut(s)	1369
Alw21I	GWGCWC	1 cut(s)	1366
Alw26I	GTCTC	4 cut(s)	734, 1678, 2037, 2159
Alw44I	GTGCAC	1 cut(s)	1362
AlwI	GGATC	3 cut(s)	139, 911, 1083
AlwNI	CAGNNNCTG	4 cut(s)	134, 1400, 1523, 2228
Ama87I	CYCGRG	1 cut(s)	647
AoxI	GGCC	5 cut(s)	651, 1376, 1535, 1802, 2002
ApaLI	GTGCAC	1 cut(s)	1362
ApoI	RAATTY	2 cut(s)	155, 1602
AseI	ATTAAT	2 cut(s)	99, 545
AsiGI	ACCGGT	1 cut(s)	2096
Asp700I	GAANNNNTTC	1 cut(s)	1425
AspA2I	CCTAGG	1 cut(s)	1163
AspLEI	GCGC	3 cut(s)	427, 890, 1976
AspS9I	GGNCC	2 cut(s)	242, 818
AsuC2I	CCSGG	1 cut(s)	1563
AsuHPI	GGTGA	4 cut(s)	710, 869, 1082, 2086
AsuNHI	GCTAGC	1 cut(s)	1279
AvaI	CYCGRG	1 cut(s)	647
AvaII	GGWCC	2 cut(s)	242, 818
AvrII	CCTAGG	1 cut(s)	1163
BaeGI	GKGCMC	2 cut(s)	1366, 2026
BanI	GGYRCC	1 cut(s)	2158
BauI	CACGAG	1 cut(s)	947
BbsI	GAAGAC	2 cut(s)	1317, 2095
Bbv12I	GWGCWC	1 cut(s)	1366
BccI	CCATC	7 cut(s)	51, 517, 577, 615, 1061, 1522, 1742
BceAI	ACGGC	1 cut(s)	824
BcgI	CGANNNNNNTGC	6 cut(s)	1475, 1509, 2158, 2186, 2192, 2220
BciT130I	CCWGG	2 cut(s)	1355, 2137
BcnI	CCSGG	1 cut(s)	1563
BcoDI	GTCTC	4 cut(s)	734, 1678, 2037, 2159
BcuI	ACTAGT	1 cut(s)	1852
BfmI	CTRYAG	2 cut(s)	30, 2208
BfoI	RGCGCY	1 cut(s)	428
BfrI	CTTAAG	1 cut(s)	1726
BfuAI	ACCTGC	3 cut(s)	612, 1462, 2201
BglI	GCCNNNNNGGC	1 cut(s)	1097
BglII	AGATCT	2 cut(s)	1549, 1980
BlnI	CCTAGG	1 cut(s)	1163
BmcAI	AGTACT	1 cut(s)	1857
Bme1390I	CCNGG	3 cut(s)	1355, 1563, 2137
Bme18I	GGWCC	2 cut(s)	242, 818
BmeT110I	CYCGRG	1 cut(s)	647
BmgT120I	GGNCC	2 cut(s)	242, 818
BmiI	GGNNCC	3 cut(s)	44, 217, 2160
BmrFI	CCNGG	3 cut(s)	1355, 1563, 2137
BmrI	ACTGGG	1 cut(s)	1054
BmsI	GCATC	6 cut(s)	257, 1184, 1200, 1724, 2118, 2136
BmtI	GCTAGC	1 cut(s)	1283
BmuI	ACTGGG	1 cut(s)	1054
BpiI	GAAGAC	2 cut(s)	1317, 2095
BpmI	CTGGAG	1 cut(s)	559
BpuEI	CTTGAG	2 cut(s)	807, 1138
BpuMI	CCSGG	1 cut(s)	1563
BsaI	GGTCTC	1 cut(s)	1678
BsaJI	CCNNGG	5 cut(s)	880, 1163, 1383, 1467, 1999
BsaWI	WCCGGW	1 cut(s)	2096
BsaXI	ACNNNNNCTCC	2 cut(s)	1658, 1688
Bsc4I	CCNNNNNNNGG	6 cut(s)	621, 827, 857, 1169, 1544, 1800
Bse118I	RCCGGY	3 cut(s)	244, 1793, 2096
Bse1I	ACTGG	7 cut(s)	260, 385, 542, 736, 862, 1049, 1911
Bse3DI	GCAATG	4 cut(s)	72, 1761, 1805, 2010
BseBI	CCWGG	2 cut(s)	1355, 2137
BseDI	CCNNGG	5 cut(s)	880, 1163, 1383, 1467, 1999
BseGI	GGATG	5 cut(s)	62, 489, 903, 1072, 1510
BseLI	CCNNNNNNNGG	6 cut(s)	621, 827, 857, 1169, 1544, 1800
BseMI	GCAATG	4 cut(s)	72, 1761, 1805, 2010
BseMII	CTCAG	3 cut(s)	408, 1664, 2154
BseNI	ACTGG	7 cut(s)	260, 385, 542, 736, 862, 1049, 1911
BseRI	GAGGAG	1 cut(s)	1638
BseSI	GKGCMC	2 cut(s)	1366, 2026
BseYI	CCCAGC	1 cut(s)	196
Bsh1236I	CGCG	4 cut(s)	356, 890, 1993, 2001
BshFI	GGCC	5 cut(s)	653, 1378, 1537, 1804, 2004
BshNI	GGYRCC	1 cut(s)	2158
BshTI	ACCGGT	1 cut(s)	2096
BsiHKAI	GWGCWC	1 cut(s)	1366
BsiHKCI	CYCGRG	1 cut(s)	647
BsiSI	CCGG	5 cut(s)	245, 1562, 1620, 1794, 2097
BslFI	GGGAC	4 cut(s)	98, 313, 1061, 1825
BslI	CCNNNNNNNGG	6 cut(s)	621, 827, 857, 1169, 1544, 1800
BsmAI	GTCTC	4 cut(s)	734, 1678, 2037, 2159
BsmBI	CGTCTC	1 cut(s)	2159
BsmFI	GGGAC	4 cut(s)	98, 313, 1061, 1825
BsmI	GAATGC	1 cut(s)	1486
BsnI	GGCC	5 cut(s)	653, 1378, 1537, 1804, 2004
Bso31I	GGTCTC	1 cut(s)	1678
BsoBI	CYCGRG	1 cut(s)	647
Bsp1286I	GDGCHC	2 cut(s)	1366, 2026
Bsp143I	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
Bsp19I	CCATGG	1 cut(s)	880
Bsp68I	TCGCGA	1 cut(s)	356
BspACI	CCGC	6 cut(s)	23, 428, 1173, 1999, 2001, 2243
BspANI	GGCC	5 cut(s)	653, 1378, 1537, 1804, 2004
BspCNI	CTCAG	3 cut(s)	409, 1663, 2155
BspFNI	CGCG	4 cut(s)	356, 890, 1993, 2001
BspLI	GGNNCC	3 cut(s)	44, 217, 2160
BspMAI	CTGCAG	2 cut(s)	34, 2212
BspMI	ACCTGC	3 cut(s)	612, 1462, 2201
BspOI	GCTAGC	1 cut(s)	1283
BspPI	GGATC	3 cut(s)	139, 911, 1083
BspT107I	GGYRCC	1 cut(s)	2158
BspTI	CTTAAG	1 cut(s)	1726
BspTNI	GGTCTC	1 cut(s)	1678
BsrDI	GCAATG	4 cut(s)	72, 1761, 1805, 2010
BsrFI	RCCGGY	3 cut(s)	244, 1793, 2096
BsrI	ACTGG	7 cut(s)	260, 385, 542, 736, 862, 1049, 1911
BssAI	RCCGGY	3 cut(s)	244, 1793, 2096
BssECI	CCNNGG	5 cut(s)	880, 1163, 1383, 1467, 1999
BssMI	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
BssSI	CACGAG	1 cut(s)	947
BssT1I	CCWWGG	3 cut(s)	880, 1163, 1467
Bst2BI	CACGAG	1 cut(s)	947
Bst2UI	CCWGG	2 cut(s)	1355, 2137
Bst4CI	ACNGT	5 cut(s)	447, 465, 516, 595, 1885
Bst6I	CTCTTC	4 cut(s)	747, 1497, 1727, 2086
BstAFI	CTTAAG	1 cut(s)	1726
BstDEI	CTNAG	4 cut(s)	417, 725, 1650, 2163
BstDSI	CCRYGG	2 cut(s)	880, 1999
BstF5I	GGATG	5 cut(s)	62, 489, 903, 1072, 1510
BstFNI	CGCG	4 cut(s)	356, 890, 1993, 2001
BstH2I	RGCGCY	1 cut(s)	428
BstHHI	GCGC	3 cut(s)	427, 890, 1976
BstKTI	GATC	6 cut(s)	134, 919, 1078, 1134, 1552, 1983
BstMAI	GTCTC	4 cut(s)	734, 1678, 2037, 2159
BstMBI	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
BstNI	CCWGG	2 cut(s)	1355, 2137
BstNSI	RCATGY	2 cut(s)	985, 2179
BstSCI	CCNGG	3 cut(s)	1353, 1561, 2135
BstSFI	CTRYAG	2 cut(s)	30, 2208
BstSLI	GKGCMC	2 cut(s)	1366, 2026
BstUI	CGCG	4 cut(s)	356, 890, 1993, 2001
BstV2I	GAAGAC	2 cut(s)	1317, 2095
BstX2I	RGATCY	4 cut(s)	131, 916, 1549, 1980
BstXI	CCANNNNNNTGG	2 cut(s)	1067, 1918
BstYI	RGATCY	4 cut(s)	131, 916, 1549, 1980
BsuRI	GGCC	5 cut(s)	653, 1378, 1537, 1804, 2004
BtgI	CCRYGG	2 cut(s)	880, 1999
BtgZI	GCGATG	2 cut(s)	189, 1122
BtsCI	GGATG	5 cut(s)	62, 489, 903, 1072, 1510
BtsI	GCAGTG	1 cut(s)	946
BtsIMutI	CAGTG	5 cut(s)	518, 729, 946, 1042, 1918
BtuMI	TCGCGA	1 cut(s)	356
BveI	ACCTGC	3 cut(s)	612, 1462, 2201
CaiI	CAGNNNCTG	4 cut(s)	134, 1400, 1523, 2228
CfoI	GCGC	3 cut(s)	427, 890, 1976
Cfr10I	RCCGGY	3 cut(s)	244, 1793, 2096
Cfr13I	GGNCC	2 cut(s)	242, 818
Cfr42I	CCGCGG	1 cut(s)	2002
Csp6I	GTAC	2 cut(s)	270, 1856
CspAI	ACCGGT	1 cut(s)	2096
CviQI	GTAC	2 cut(s)	270, 1856
DdeI	CTNAG	4 cut(s)	417, 725, 1650, 2163
DpnI	GATC	6 cut(s)	133, 918, 1077, 1133, 1551, 1982
DpnII	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
Eam1104I	CTCTTC	4 cut(s)	747, 1497, 1727, 2086
EarI	CTCTTC	4 cut(s)	747, 1497, 1727, 2086
Eco130I	CCWWGG	3 cut(s)	880, 1163, 1467
Eco31I	GGTCTC	1 cut(s)	1678
Eco47I	GGWCC	2 cut(s)	242, 818
Eco57I	CTGAAG	2 cut(s)	1107, 1592
Eco88I	CYCGRG	1 cut(s)	647
EcoRII	CCWGG	2 cut(s)	1353, 2135
EcoT14I	CCWWGG	3 cut(s)	880, 1163, 1467
ErhI	CCWWGG	3 cut(s)	880, 1163, 1467
Esp3I	CGTCTC	1 cut(s)	2159
FaqI	GGGAC	4 cut(s)	98, 313, 1061, 1825
FokI	GGATG	5 cut(s)	69, 496, 890, 1079, 1497
FspI	TGCGCA	1 cut(s)	1975
GlaI	GCGC	3 cut(s)	426, 889, 1975
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	1 cut(s)	559
HaeII	RGCGCY	1 cut(s)	428
HaeIII	GGCC	5 cut(s)	653, 1378, 1537, 1804, 2004
HapII	CCGG	5 cut(s)	245, 1562, 1620, 1794, 2097
HhaI	GCGC	3 cut(s)	427, 890, 1976
Hin6I	GCGC	3 cut(s)	425, 888, 1974
HinP1I	GCGC	3 cut(s)	425, 888, 1974
HincII	GTYRAC	2 cut(s)	1864, 1873
HindII	GTYRAC	2 cut(s)	1864, 1873
HinfI	GANTC	9 cut(s)	527, 611, 642, 994, 1082, 1702, 2091, 2234, 2246
HpaII	CCGG	5 cut(s)	245, 1562, 1620, 1794, 2097
HphI	GGTGA	4 cut(s)	710, 869, 1082, 2086
Hpy166II	GTNNAC	9 cut(s)	173, 340, 946, 1364, 1421, 1864, 1873, 1891, 2149
Hpy188III	TCNNGA	9 cut(s)	240, 355, 824, 1079, 1207, 1556, 1831, 1960, 2035
Hpy8I	GTNNAC	9 cut(s)	173, 340, 946, 1364, 1421, 1864, 1873, 1891, 2149
HpyAV	CCTTC	6 cut(s)	179, 467, 1319, 1794, 2149, 2164
HpyCH4III	ACNGT	5 cut(s)	447, 465, 516, 595, 1885
HpyCH4IV	ACGT	1 cut(s)	342
HpyF3I	CTNAG	4 cut(s)	417, 725, 1650, 2163
HpySE526I	ACGT	1 cut(s)	342
HspAI	GCGC	3 cut(s)	425, 888, 1974
KroI	GCCGGC	1 cut(s)	1793
KroNI	GCCGGC	1 cut(s)	1795
KspI	CCGCGG	1 cut(s)	2002
Kzo9I	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
LmnI	GCTCC	3 cut(s)	8, 215, 885
LweI	GCATC	6 cut(s)	257, 1184, 1200, 1724, 2118, 2136
MaeII	ACGT	1 cut(s)	342
MaeIII	GTNAC	3 cut(s)	391, 516, 925
MalI	GATC	6 cut(s)	133, 918, 1077, 1133, 1551, 1982
MboI	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
MflI	RGATCY	4 cut(s)	131, 916, 1549, 1980
MhlI	GDGCHC	2 cut(s)	1366, 2026
MluCI	AATT	7 cut(s)	64, 91, 100, 155, 161, 1006, 1602
MluI	ACGCGT	1 cut(s)	1991
MmeI	TCCRAC	2 cut(s)	1730, 2068
MroNI	GCCGGC	1 cut(s)	1793
MroXI	GAANNNNTTC	1 cut(s)	1425
MseI	TTAA	9 cut(s)	87, 99, 147, 545, 675, 869, 1530, 1727, 1748
MslI	CAYNNNNRTG	1 cut(s)	1369
MspA1I	CMGCKG	2 cut(s)	2001, 2225
MspCI	CTTAAG	1 cut(s)	1726
MspI	CCGG	5 cut(s)	245, 1562, 1620, 1794, 2097
MspR9I	CCNGG	3 cut(s)	1355, 1563, 2137
Mva1269I	GAATGC	1 cut(s)	1486
MvaI	CCWGG	2 cut(s)	1355, 2137
MvnI	CGCG	4 cut(s)	356, 890, 1993, 2001
NaeI	GCCGGC	1 cut(s)	1795
NciI	CCSGG	1 cut(s)	1563
NcoI	CCATGG	1 cut(s)	880
NdeII	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
NgoMIV	GCCGGC	1 cut(s)	1793
NheI	GCTAGC	1 cut(s)	1279
NlaIV	GGNNCC	3 cut(s)	44, 217, 2160
NmuCI	GTSAC	2 cut(s)	516, 925
NruI	TCGCGA	1 cut(s)	356
NsbI	TGCGCA	1 cut(s)	1975
NspI	RCATGY	2 cut(s)	985, 2179
OliI	CACNNNNGTG	1 cut(s)	1369
PaeI	GCATGC	2 cut(s)	985, 2179
PaeR7I	CTCGAG	1 cut(s)	647
PaqCI	CACCTGC	1 cut(s)	2201
PcsI	WCGNNNNNNNCGW	2 cut(s)	1674, 2127
PctI	GAATGC	1 cut(s)	1486
PdiI	GCCGGC	1 cut(s)	1795
PdmI	GAANNNNTTC	1 cut(s)	1425
PfeI	GAWTC	9 cut(s)	527, 611, 642, 994, 1082, 1702, 2091, 2234, 2246
PflFI	GACNNNGTC	1 cut(s)	1670
PfoI	TCCNGGA	1 cut(s)	2135
PinAI	ACCGGT	1 cut(s)	2096
PshBI	ATTAAT	2 cut(s)	99, 545
PsiI	TTATAA	1 cut(s)	1287
Psp6I	CCWGG	2 cut(s)	1353, 2135
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	2 cut(s)	1353, 2135
PspN4I	GGNNCC	3 cut(s)	44, 217, 2160
PspPI	GGNCC	2 cut(s)	242, 818
PspXI	VCTCGAGB	1 cut(s)	647
PstI	CTGCAG	2 cut(s)	34, 2212
PstNI	CAGNNNCTG	4 cut(s)	134, 1400, 1523, 2228
PsuI	RGATCY	4 cut(s)	131, 916, 1549, 1980
PsyI	GACNNNGTC	1 cut(s)	1670
PvuII	CAGCTG	1 cut(s)	2225
RruI	TCGCGA	1 cut(s)	356
RsaI	GTAC	2 cut(s)	271, 1857
RsaNI	GTAC	2 cut(s)	270, 1856
RseI	CAYNNNNRTG	1 cut(s)	1369
SacII	CCGCGG	1 cut(s)	2002
SaqAI	TTAA	9 cut(s)	87, 99, 147, 545, 675, 869, 1530, 1727, 1748
Sau3AI	GATC	6 cut(s)	131, 916, 1075, 1131, 1549, 1980
Sau96I	GGNCC	2 cut(s)	242, 818
ScaI	AGTACT	1 cut(s)	1857
ScrFI	CCNGG	3 cut(s)	1355, 1563, 2137
SduI	GDGCHC	2 cut(s)	1366, 2026
SfaNI	GCATC	6 cut(s)	257, 1184, 1200, 1724, 2118, 2136
SfcI	CTRYAG	2 cut(s)	30, 2208
Sfr274I	CTCGAG	1 cut(s)	647
Sfr303I	CCGCGG	1 cut(s)	2002
SgrAI	CRCCGGYG	1 cut(s)	2096
SgrBI	CCGCGG	1 cut(s)	2002
SinI	GGWCC	2 cut(s)	242, 818
SlaI	CTCGAG	1 cut(s)	647
SmiMI	CAYNNNNRTG	1 cut(s)	1369
SmlI	CTYRAG	4 cut(s)	647, 822, 1117, 1726
SmoI	CTYRAG	4 cut(s)	647, 822, 1117, 1726
SpeI	ACTAGT	1 cut(s)	1852
SphI	GCATGC	2 cut(s)	985, 2179
Sse9I	AATT	7 cut(s)	64, 91, 100, 155, 161, 1006, 1602
SsiI	CCGC	6 cut(s)	23, 428, 1173, 1999, 2001, 2243
SspI	AATATT	1 cut(s)	1292
StyD4I	CCNGG	3 cut(s)	1353, 1561, 2135
StyI	CCWWGG	3 cut(s)	880, 1163, 1467
TaaI	ACNGT	5 cut(s)	447, 465, 516, 595, 1885
TaiI	ACGT	1 cut(s)	345
TaqI	TCGA	3 cut(s)	640, 648, 1495
TaqII	GACCGA	1 cut(s)	1314
TasI	AATT	7 cut(s)	64, 91, 100, 155, 161, 1006, 1602
TatI	WGTACW	1 cut(s)	1855
TauI	GCSGC	2 cut(s)	430, 2004
TfiI	GAWTC	9 cut(s)	527, 611, 642, 994, 1082, 1702, 2091, 2234, 2246
Tru1I	TTAA	9 cut(s)	87, 99, 147, 545, 675, 869, 1530, 1727, 1748
Tru9I	TTAA	9 cut(s)	87, 99, 147, 545, 675, 869, 1530, 1727, 1748
TscAI	CASTG	5 cut(s)	525, 736, 946, 1049, 1918
TseFI	GTSAC	2 cut(s)	516, 925
Tsp45I	GTSAC	2 cut(s)	516, 925
TspDTI	ATGAA	8 cut(s)	214, 276, 292, 457, 748, 1338, 1418, 2226
TspGWI	ACGGA	4 cut(s)	384, 1079, 1329, 1666
TspRI	CASTG	5 cut(s)	525, 736, 946, 1049, 1918
Tth111I	GACNNNGTC	1 cut(s)	1670
Vha464I	CTTAAG	1 cut(s)	1726
VneI	GTGCAC	1 cut(s)	1362
VpaK11BI	GGWCC	2 cut(s)	242, 818
VspI	ATTAAT	2 cut(s)	99, 545
XapI	RAATTY	2 cut(s)	155, 1602
XceI	RCATGY	2 cut(s)	985, 2179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1780
XhoI	CTCGAG	1 cut(s)	647
XmaJI	CCTAGG	1 cut(s)	1163
XmnI	GAANNNNTTC	1 cut(s)	1425
ZrmI	AGTACT	1 cut(s)	1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.