Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0003454

Physical Location & Seq

Genomic Coordinates Forward (+)

9753210 .. 9756542

Gene Structure 3333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG109600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGTTCATATTTAGCTCTAGTTGTTTCACAAAAATTAATATTGCAGGGTCTGTTCTTTATATAAAAAAGGAATTCAATTTAGAAAGTGAGCCGACATTTGAAGGGCTTATTGTAGCAACATCACTCATTGGAGCCACATTGATCACAACATTTTCTGGGCCAGCATCGGATTGGCTGGGGCGGCGAACAATGCTCATAATGTCATCACTGTTTTTCTTTGTTAGTGGTCTGGTAATGTTGTGGTCTCCAAATGTTTATGTCTTGCTTTTGGCTAGGTTGTTAGATGGTTTTGGAACCGGTTTGGCTGTTACTCTTGTTCCTGCTTATATATCTGAGATAGCGCCACCGGATATTAGAGGAAGACTGAATACACTTCCACAGTTCACTGGTTCTGGTGGGATGTTCTTGTCTTATTGTATGGTGTTTGGAATGTCATTGATGGATACACCAAAGTGGAGATTGATGCTCGGTGTTTTGTCCATTCCATCATTAGCTTATTTCGCTTTGACAATACTTTACCTGCCTGAATCTCCTCGGTGGCTTGTGAGTAAGGGACGAATCCTCGAGGCAAAACAAGTGCTGCAAAGACTTAATGGCAGGGAAGATGTTTCAGGTGAGTTGGCTTTGCTAGTTGAAGGTCTAAACACTGGCAAAGATACATCATTGGAAGAGTACATTATTAGTCCAGCCAATGTGCTTAACCAGGCAACTGAAGAGAAGTACCAAATAAGGTTATATGGGGATGAAGAGGGAGTATCATATATTGCTAAACCAGTAACAGGACAGAGTTTGACATCTCGCCATGGGAGTGCTACAAACCAAAGTAGCATCTCTCTTAAGGATCCTCTTGTGACGCTCTTTAGTAGTGTCCATGAGAAGCTCTCTGAGAGAGGAGGAAGCAAGGGCAGCAGCATGCTTCCATTTCTAGGCAGTGTTCTGGTTAATGCTGGGGAGCATCACAGTAAGCATTGGGACATGGAGAGCCAAAGCGACGATGAGGACAATGAATCAGAAACATCCGGGGCTTATGGTGATGACAGTTTGAGAAGTCCATTGATCTCGCGTCAAACAACAAGTGTGGACAAGGACATTGCCACTCCTAAATCCGGTGGAAGTGTTTTAGGTGTAAGAGGCAATACCATTCTTAATGCTGTTGAGGCAGGTAGTACTAGTAGTATAGATATTGGTGGTGGTTGGCAGCTTGCTTATAAATATGCTGAGCGAGTAAGTGAAGATGGGAAGAAGGAAGGAGTTCAAAGAGTCTATTTGCACCAGGAGAGTGCACTTGGGTCTCAACCTGCATCGGTTGTTTCCATTTCTGGTGTAAGGCAAGAAAATGGAGCAATTCAGGCTGCTGCTTTGGTTAGTCCACCGATGGTTCTTCCACCAGAAGCTGTTGTTAAAGGTTCAAAATGGAGAGACCTTTTGGAACCAGGAGTCAAGCGCGCATTGGTTGTCGGGATAGGACTTCAAGTTCTTGAGCAGATTGCTGGCATAAATGGGGTTCTCTACTACACTCCTCAGATTTATGAGCGAACAGGCGTAACAGTTCTTCTGTCTAACATAGGACTGAATTCGGCTTCTGCATCTCTCTTCTTAAGTGCCATCACAACATTCTTAATGCTTCCTTGCATAGCTACTTCCATGTGGCTTATGGATATAGCTGGCAGAAGGTCATTGCTGCTATCCACATTACCAATACTGATAGTGGTGCTTGCTTTACTAGTGTTTGGCAGCATTGTCAACTTAGGCACTATTTGGACTGCAACAATATCCACTGCTAGTGTATTGGTCTACCTCTGCTGCTTCGTCATGGGCTTCGGGGTAATCCCAAATATTCTTTGTGCAGAGATCTTCCCTACTCGCGTCCGTGGCCTCTGCATTGCCATTTGTGCTCTCACTTATTGGATTGGAGACATCATCATCACTTACTCATTCCCTGTCATGCTCTCCTCCATTGGTTTTGCTGGTGTCTTTGGAATCTACGTTGTCGGATGCATCATCTCCTGGATATTTGTTTACTTGAAAGTGCCCGAAACCAAGGGCATGCCTCTAGAAGTGATTTCTGAGTTCTTTGCTGCTGGAGTAAAACCAGCTTCAGATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

702

Amino Acids

75.65

Weight (kDa)

5.43

Isoelectric Point (pI)

39.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	5 - 183	1.2e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	34 - 223	2.8e-48	Sugar (and other) transporter
Sugar_tr	PF00083	471 - 692	1.2e-36	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003454)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10120 FvH4_2g16850 FvH4_5g25950
malus_domestica	MD02G1109600.v1.1 MD02G1109800.v1.1 MD02G1112000.v1.1 MD02G1112900.v1.1 MD15G1228400.v1.1
prunus_persica	Prupe.7G185700_v2.0.a1 Prupe.7G185800_v2.0.a1 Prupe.7G185800_v2.0.a1
pyrus_communis	pycom15g20350
rosa_chinensis	RchiOBHm_Chr2g0096891 RchiOBHm_Chr4g0410591 RchiOBHm_Chr5g0025901
rosa_laevigata	RLG00000008254 RLG00000016680
rosa_multiflora	Rmu_co8305667.1_g000001 Rmu_ssc0000215.1_g000005
rosa_roxburghii	Rroxscaffold_1G00071210 Rroxscaffold_2G00145180
rosa_rugosa	Rorug02G0061700 Rorug02G0061700
rosa_samantha	Rh2AG109600 Rh2BG111500 Rh2CG113600 Rh2DG112700 Rh4CG174500 Rh5CG197800 Rh5DG180200 Rh6BG252000 Rh7AG299900 Rh7CG318500 Rh7DG300100
rosa_wichuraiana	Rw2G008460 Rw5G016470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1209
AbsI	CCTCGAGG	1 cut(s)	563
Acc36I	ACCTGC	3 cut(s)	528, 1151, 1306
AccI	GTMKAC	1 cut(s)	1794
AccII	CGCG	3 cut(s)	1063, 1446, 1866
AciI	CCGC	1 cut(s)	181
AclWI	GGATC	2 cut(s)	836, 849
AcsI	RAATTY	2 cut(s)	71, 1573
AcuI	CTGAAG	2 cut(s)	732, 2082
AfaI	GTAC	3 cut(s)	674, 722, 1168
AfiI	CCNNNNNNNGG	3 cut(s)	779, 926, 1106
AflII	CTTAAG	2 cut(s)	836, 1597
AgeI	ACCGGT	1 cut(s)	296
AgsI	TTSAA	7 cut(s)	76, 101, 635, 1256, 1410, 1472, 2026
AhlI	ACTAGT	2 cut(s)	1169, 1723
AjnI	CCWGG	4 cut(s)	702, 1272, 1432, 2006
AleI	CACNNNNGTG	1 cut(s)	451
AloI	GAACNNNNNNTCC	2 cut(s)	1458, 1490
AluBI	AGCT	8 cut(s)	15, 494, 880, 1201, 1394, 1637, 1664, 2096
AluI	AGCT	8 cut(s)	15, 494, 880, 1201, 1394, 1637, 1664, 2096
Alw21I	GWGCWC	2 cut(s)	1285, 1897
Alw26I	GTCTC	4 cut(s)	249, 1296, 1413, 1908
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	2 cut(s)	836, 849
AlwNI	CAGNNNCTG	2 cut(s)	50, 1394
Ama87I	CYCGRG	1 cut(s)	563
AoxI	GGCC	2 cut(s)	158, 1873
ApaLI	GTGCAC	1 cut(s)	1281
ApoI	RAATTY	2 cut(s)	71, 1573
AseI	ATTAAT	1 cut(s)	36
AsiGI	ACCGGT	1 cut(s)	296
Asp700I	GAANNNNTTC	1 cut(s)	1251
AspLEI	GCGC	3 cut(s)	343, 1446, 1448
AspS9I	GGNCC	1 cut(s)	158
AsuC2I	CCSGG	1 cut(s)	1021
AsuHPI	GGTGA	2 cut(s)	626, 1043
AvaI	CYCGRG	1 cut(s)	563
BaeGI	GKGCMC	2 cut(s)	1285, 2034
BamHI	GGATCC	1 cut(s)	841
BarI	GAAGNNNNNNTAC	4 cut(s)	352, 384, 1536, 1568
BbsI	GAAGAC	1 cut(s)	367
Bbv12I	GWGCWC	2 cut(s)	1285, 1897
BccI	CCATC	6 cut(s)	278, 433, 493, 1229, 1369, 1613
BciT130I	CCWGG	4 cut(s)	704, 1274, 1434, 2008
BciVI	GTATCC	1 cut(s)	436
BclI	TGATCA	1 cut(s)	141
BcnI	CCSGG	1 cut(s)	1021
BcoDI	GTCTC	4 cut(s)	249, 1296, 1413, 1908
BcuI	ACTAGT	2 cut(s)	1169, 1723
BfaI	CTAG	8 cut(s)	18, 273, 629, 926, 1170, 1724, 1782, 2054
BfoI	RGCGCY	1 cut(s)	344
BfrI	CTTAAG	2 cut(s)	836, 1597
BfuAI	ACCTGC	3 cut(s)	528, 1151, 1306
BfuI	GTATCC	1 cut(s)	436
BglII	AGATCT	1 cut(s)	1851
BlpI	GCTNAGC	1 cut(s)	1218
BmcAI	AGTACT	1 cut(s)	1168
Bme1390I	CCNGG	5 cut(s)	704, 1021, 1274, 1434, 2008
BmeT110I	CYCGRG	1 cut(s)	563
BmgT120I	GGNCC	1 cut(s)	158
BmiI	GGNNCC	4 cut(s)	133, 295, 843, 1431
BmrFI	CCNGG	5 cut(s)	704, 1021, 1274, 1434, 2008
BmsI	GCATC	8 cut(s)	173, 453, 837, 964, 1310, 1595, 1985, 2007
BpiI	GAAGAC	1 cut(s)	367
BplI	GAGNNNNNCTC	2 cut(s)	866, 898
BpmI	CTGGAG	1 cut(s)	2103
Bpu1102I	GCTNAGC	1 cut(s)	1218
BpuEI	CTTGAG	1 cut(s)	1499
BpuMI	CCSGG	1 cut(s)	1021
BsaI	GGTCTC	3 cut(s)	249, 1296, 1413
BsaJI	CCNNGG	5 cut(s)	533, 802, 1020, 1870, 2040
BsaWI	WCCGGW	3 cut(s)	296, 346, 1106
Bsc4I	CCNNNNNNNGG	3 cut(s)	779, 926, 1106
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	3 cut(s)	391, 652, 773
Bse3DI	GCAATG	3 cut(s)	1089, 1676, 1881
BseBI	CCWGG	4 cut(s)	704, 1274, 1434, 2008
BseDI	CCNNGG	5 cut(s)	533, 802, 1020, 1870, 2040
BseGI	GGATG	4 cut(s)	405, 748, 1016, 2000
BseLI	CCNNNNNNNGG	3 cut(s)	779, 926, 1106
BseMI	GCAATG	3 cut(s)	1089, 1676, 1881
BseMII	CTCAG	5 cut(s)	324, 876, 1209, 1535, 2058
BseNI	ACTGG	3 cut(s)	391, 652, 773
BsePI	GCGCGC	1 cut(s)	1444
BseRI	GAGGAG	4 cut(s)	522, 906, 1509, 1942
BseSI	GKGCMC	2 cut(s)	1285, 2034
BseYI	CCCAGC	2 cut(s)	175, 947
BsgI	GTGCAG	1 cut(s)	1866
Bsh1236I	CGCG	3 cut(s)	1063, 1446, 1866
BshFI	GGCC	2 cut(s)	160, 1875
BshTI	ACCGGT	1 cut(s)	296
BsiHKAI	GWGCWC	2 cut(s)	1285, 1897
BsiHKCI	CYCGRG	1 cut(s)	563
BsiSI	CCGG	4 cut(s)	297, 347, 1020, 1107
BslFI	GGGAC	2 cut(s)	567, 986
BslI	CCNNNNNNNGG	3 cut(s)	779, 926, 1106
BsmAI	GTCTC	4 cut(s)	249, 1296, 1413, 1908
BsmFI	GGGAC	2 cut(s)	567, 986
BsnI	GGCC	2 cut(s)	160, 1875
Bso31I	GGTCTC	3 cut(s)	249, 1296, 1413
BsoBI	CYCGRG	1 cut(s)	563
Bsp1286I	GDGCHC	3 cut(s)	1285, 1897, 2034
Bsp143I	GATC	4 cut(s)	141, 841, 1056, 1851
Bsp1720I	GCTNAGC	1 cut(s)	1218
Bsp19I	CCATGG	1 cut(s)	802
BspACI	CCGC	1 cut(s)	181
BspANI	GGCC	2 cut(s)	160, 1875
BspCNI	CTCAG	5 cut(s)	325, 877, 1210, 1534, 2059
BspFNI	CGCG	3 cut(s)	1063, 1446, 1866
BspLI	GGNNCC	4 cut(s)	133, 295, 843, 1431
BspMI	ACCTGC	3 cut(s)	528, 1151, 1306
BspPI	GGATC	2 cut(s)	836, 849
BspTI	CTTAAG	2 cut(s)	836, 1597
BspTNI	GGTCTC	3 cut(s)	249, 1296, 1413
BsrDI	GCAATG	3 cut(s)	1089, 1676, 1881
BsrFI	RCCGGY	1 cut(s)	296
BsrI	ACTGG	3 cut(s)	391, 652, 773
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	5 cut(s)	533, 802, 1020, 1870, 2040
BssHII	GCGCGC	1 cut(s)	1444
BssMI	GATC	4 cut(s)	141, 841, 1056, 1851
BssT1I	CCWWGG	2 cut(s)	802, 2040
Bst2UI	CCWGG	4 cut(s)	704, 1274, 1434, 2008
Bst4CI	ACNGT	5 cut(s)	210, 381, 962, 1040, 1549
Bst6I	CTCTTC	4 cut(s)	663, 708, 741, 1598
BstAFI	CTTAAG	2 cut(s)	836, 1597
BstC8I	GCNNGC	8 cut(s)	162, 914, 1203, 1446, 1492, 1666, 1716, 2048
BstDEI	CTNAG	6 cut(s)	333, 885, 1218, 1521, 1747, 2067
BstDSI	CCRYGG	2 cut(s)	802, 1870
BstF5I	GGATG	4 cut(s)	405, 748, 1016, 2000
BstFNI	CGCG	3 cut(s)	1063, 1446, 1866
BstH2I	RGCGCY	1 cut(s)	344
BstHHI	GCGC	3 cut(s)	343, 1446, 1448
BstKTI	GATC	4 cut(s)	144, 844, 1059, 1854
BstMAI	GTCTC	4 cut(s)	249, 1296, 1413, 1908
BstMBI	GATC	4 cut(s)	141, 841, 1056, 1851
BstMWI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 906, 1157, 1349, 1872, 1892
BstNI	CCWGG	4 cut(s)	704, 1274, 1434, 2008
BstNSI	RCATGY	2 cut(s)	916, 2050
BstSCI	CCNGG	5 cut(s)	702, 1019, 1272, 1432, 2006
BstSLI	GKGCMC	2 cut(s)	1285, 2034
BstUI	CGCG	3 cut(s)	1063, 1446, 1866
BstV2I	GAAGAC	1 cut(s)	367
BstX2I	RGATCY	2 cut(s)	841, 1851
BstYI	RGATCY	2 cut(s)	841, 1851
BsuI	GTATCC	1 cut(s)	436
BsuRI	GGCC	2 cut(s)	160, 1875
BtgI	CCRYGG	2 cut(s)	802, 1870
BtsCI	GGATG	4 cut(s)	405, 748, 1016, 2000
BtsI	GCAGTG	2 cut(s)	937, 1776
BtsIMutI	CAGTG	5 cut(s)	206, 384, 645, 937, 1776
BveI	ACCTGC	3 cut(s)	528, 1151, 1306
Cac8I	GCNNGC	8 cut(s)	162, 914, 1203, 1446, 1492, 1666, 1716, 2048
CaiI	CAGNNNCTG	2 cut(s)	50, 1394
CfoI	GCGC	3 cut(s)	343, 1446, 1448
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	1 cut(s)	158
CseI	GACGC	3 cut(s)	862, 1052, 1855
Csp6I	GTAC	3 cut(s)	673, 721, 1167
CspAI	ACCGGT	1 cut(s)	296
CspCI	CAANNNNNGTGG	2 cut(s)	1059, 1094
CviAII	CATG	8 cut(s)	803, 872, 913, 976, 1645, 1813, 1945, 2047
CviQI	GTAC	3 cut(s)	673, 721, 1167
DdeI	CTNAG	6 cut(s)	333, 885, 1218, 1521, 1747, 2067
DpnI	GATC	4 cut(s)	143, 843, 1058, 1853
DpnII	GATC	4 cut(s)	141, 841, 1056, 1851
Eam1104I	CTCTTC	4 cut(s)	663, 708, 741, 1598
EarI	CTCTTC	4 cut(s)	663, 708, 741, 1598
Eco130I	CCWWGG	2 cut(s)	802, 2040
Eco31I	GGTCTC	3 cut(s)	249, 1296, 1413
Eco57I	CTGAAG	2 cut(s)	732, 2082
Eco88I	CYCGRG	1 cut(s)	563
EcoRI	GAATTC	2 cut(s)	71, 1573
EcoRII	CCWGG	4 cut(s)	702, 1272, 1432, 2006
EcoT14I	CCWWGG	2 cut(s)	802, 2040
EcoT22I	ATGCAT	1 cut(s)	2000
ErhI	CCWWGG	2 cut(s)	802, 2040
FaeI	CATG	8 cut(s)	806, 875, 916, 979, 1648, 1816, 1948, 2050
FaqI	GGGAC	2 cut(s)	567, 986
FatI	CATG	8 cut(s)	802, 871, 912, 975, 1644, 1812, 1944, 2046
FbaI	TGATCA	1 cut(s)	141
FblI	GTMKAC	1 cut(s)	1794
FokI	GGATG	4 cut(s)	412, 755, 1003, 2007
FspBI	CTAG	8 cut(s)	18, 273, 629, 926, 1170, 1724, 1782, 2054
GlaI	GCGC	3 cut(s)	342, 1445, 1447
GsaI	CCCAGC	2 cut(s)	179, 951
GsuI	CTGGAG	1 cut(s)	2103
HaeII	RGCGCY	1 cut(s)	344
HaeIII	GGCC	2 cut(s)	160, 1875
HapII	CCGG	4 cut(s)	297, 347, 1020, 1107
HgaI	GACGC	3 cut(s)	862, 1052, 1855
HhaI	GCGC	3 cut(s)	343, 1446, 1448
Hin1II	CATG	8 cut(s)	806, 875, 916, 979, 1648, 1816, 1948, 2050
Hin6I	GCGC	3 cut(s)	341, 1444, 1446
HinP1I	GCGC	3 cut(s)	341, 1444, 1446
HincII	GTYRAC	1 cut(s)	1744
HindII	GTYRAC	1 cut(s)	1744
HinfI	GANTC	6 cut(s)	527, 558, 1007, 1260, 1437, 1980
HpaII	CCGG	4 cut(s)	297, 347, 1020, 1107
HphI	GGTGA	2 cut(s)	626, 1043
Hpy166II	GTNNAC	7 cut(s)	384, 1081, 1283, 1370, 1744, 1795, 2020
Hpy188I	TCNGA	8 cut(s)	169, 334, 886, 1012, 1524, 1994, 2068, 2101
Hpy188III	TCNNGA	3 cut(s)	1459, 1478, 2054
Hpy8I	GTNNAC	7 cut(s)	384, 1081, 1283, 1370, 1744, 1795, 2020
Hpy99I	CGWCG	1 cut(s)	995
HpyAV	CCTTC	5 cut(s)	95, 629, 1237, 1241, 1665
HpyCH4III	ACNGT	5 cut(s)	210, 381, 962, 1040, 1549
HpyCH4IV	ACGT	1 cut(s)	1986
HpyF10VI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 906, 1157, 1349, 1872, 1892
HpyF3I	CTNAG	6 cut(s)	333, 885, 1218, 1521, 1747, 2067
HpySE526I	ACGT	1 cut(s)	1986
Hsp92II	CATG	8 cut(s)	806, 875, 916, 979, 1648, 1816, 1948, 2050
HspAI	GCGC	3 cut(s)	341, 1444, 1446
Ksp22I	TGATCA	1 cut(s)	141
Kzo9I	GATC	4 cut(s)	141, 841, 1056, 1851
LmnI	GCTCC	3 cut(s)	131, 952, 1340
LweI	GCATC	8 cut(s)	173, 453, 837, 964, 1310, 1595, 1985, 2007
MaeI	CTAG	8 cut(s)	18, 273, 629, 926, 1170, 1724, 1782, 2054
MaeII	ACGT	1 cut(s)	1986
MaeIII	GTNAC	4 cut(s)	307, 775, 850, 1543
MalI	GATC	4 cut(s)	143, 843, 1058, 1853
MboI	GATC	4 cut(s)	141, 841, 1056, 1851
MflI	RGATCY	2 cut(s)	841, 1851
MhlI	GDGCHC	3 cut(s)	1285, 1897, 2034
MluCI	AATT	5 cut(s)	33, 71, 76, 1344, 1573
MlyI	GAGTC	2 cut(s)	1269, 1446
MmeI	TCCRAC	1 cut(s)	1972
Mph1103I	ATGCAT	1 cut(s)	2000
MroXI	GAANNNNTTC	1 cut(s)	1251
MseI	TTAA	9 cut(s)	36, 591, 699, 837, 942, 1146, 1401, 1598, 1619
MslI	CAYNNNNRTG	2 cut(s)	451, 807
MspCI	CTTAAG	2 cut(s)	836, 1597
MspI	CCGG	4 cut(s)	297, 347, 1020, 1107
MspR9I	CCNGG	5 cut(s)	704, 1021, 1274, 1434, 2008
MvaI	CCWGG	4 cut(s)	704, 1274, 1434, 2008
MvnI	CGCG	3 cut(s)	1063, 1446, 1866
MwoI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 906, 1157, 1349, 1872, 1892
NciI	CCSGG	1 cut(s)	1021
NcoI	CCATGG	1 cut(s)	802
NdeII	GATC	4 cut(s)	141, 841, 1056, 1851
NlaIII	CATG	8 cut(s)	806, 875, 916, 979, 1648, 1816, 1948, 2050
NlaIV	GGNNCC	4 cut(s)	133, 295, 843, 1431
NmuCI	GTSAC	1 cut(s)	850
NsiI	ATGCAT	1 cut(s)	2000
NspI	RCATGY	2 cut(s)	916, 2050
OliI	CACNNNNGTG	1 cut(s)	451
PaeI	GCATGC	2 cut(s)	916, 2050
PaeR7I	CTCGAG	1 cut(s)	563
PauI	GCGCGC	1 cut(s)	1444
PdmI	GAANNNNTTC	1 cut(s)	1251
PfeI	GAWTC	4 cut(s)	527, 558, 1007, 1980
PfoI	TCCNGGA	1 cut(s)	2006
PinAI	ACCGGT	1 cut(s)	296
PleI	GAGTC	2 cut(s)	1268, 1445
PpsI	GAGTC	2 cut(s)	1268, 1445
PshBI	ATTAAT	1 cut(s)	36
PsiI	TTATAA	1 cut(s)	1209
Psp6I	CCWGG	4 cut(s)	702, 1272, 1432, 2006
PspFI	CCCAGC	2 cut(s)	175, 947
PspGI	CCWGG	4 cut(s)	702, 1272, 1432, 2006
PspN4I	GGNNCC	4 cut(s)	133, 295, 843, 1431
PspPI	GGNCC	1 cut(s)	158
PspXI	VCTCGAGB	1 cut(s)	563
PstNI	CAGNNNCTG	2 cut(s)	50, 1394
PsuI	RGATCY	2 cut(s)	841, 1851
PteI	GCGCGC	1 cut(s)	1444
RsaI	GTAC	3 cut(s)	674, 722, 1168
RsaNI	GTAC	3 cut(s)	673, 721, 1167
RseI	CAYNNNNRTG	2 cut(s)	451, 807
SaqAI	TTAA	9 cut(s)	36, 591, 699, 837, 942, 1146, 1401, 1598, 1619
Sau3AI	GATC	4 cut(s)	141, 841, 1056, 1851
Sau96I	GGNCC	1 cut(s)	158
ScaI	AGTACT	1 cut(s)	1168
SchI	GAGTC	2 cut(s)	1269, 1446
ScrFI	CCNGG	5 cut(s)	704, 1021, 1274, 1434, 2008
SduI	GDGCHC	3 cut(s)	1285, 1897, 2034
SfaNI	GCATC	8 cut(s)	173, 453, 837, 964, 1310, 1595, 1985, 2007
Sfr274I	CTCGAG	1 cut(s)	563
SlaI	CTCGAG	1 cut(s)	563
SmiMI	CAYNNNNRTG	2 cut(s)	451, 807
SmlI	CTYRAG	4 cut(s)	563, 836, 1478, 1597
SmoI	CTYRAG	4 cut(s)	563, 836, 1478, 1597
SpeI	ACTAGT	2 cut(s)	1169, 1723
SphI	GCATGC	2 cut(s)	916, 2050
Sse9I	AATT	5 cut(s)	33, 71, 76, 1344, 1573
SsiI	CCGC	1 cut(s)	181
SspI	AATATT	2 cut(s)	40, 1837
SspMI	CTAG	8 cut(s)	18, 273, 629, 926, 1170, 1724, 1782, 2054
StyD4I	CCNGG	5 cut(s)	702, 1019, 1272, 1432, 2006
StyI	CCWWGG	2 cut(s)	802, 2040
TaaI	ACNGT	5 cut(s)	210, 381, 962, 1040, 1549
TaiI	ACGT	1 cut(s)	1989
TaqI	TCGA	1 cut(s)	564
TasI	AATT	5 cut(s)	33, 71, 76, 1344, 1573
TatI	WGTACW	2 cut(s)	672, 1166
TauI	GCSGC	1 cut(s)	184
TfiI	GAWTC	4 cut(s)	527, 558, 1007, 1980
Tru1I	TTAA	9 cut(s)	36, 591, 699, 837, 942, 1146, 1401, 1598, 1619
Tru9I	TTAA	9 cut(s)	36, 591, 699, 837, 942, 1146, 1401, 1598, 1619
TscAI	CASTG	5 cut(s)	213, 391, 652, 937, 1783
TseFI	GTSAC	1 cut(s)	850
Tsp45I	GTSAC	1 cut(s)	850
TspDTI	ATGAA	2 cut(s)	759, 1020
TspGWI	ACGGA	1 cut(s)	1859
TspRI	CASTG	5 cut(s)	213, 391, 652, 937, 1783
Vha464I	CTTAAG	2 cut(s)	836, 1597
VneI	GTGCAC	1 cut(s)	1281
VspI	ATTAAT	1 cut(s)	36
XapI	RAATTY	2 cut(s)	71, 1573
XbaI	TCTAGA	1 cut(s)	2053
XceI	RCATGY	2 cut(s)	916, 2050
XcmI	CCANNNNNNNNNTGG	2 cut(s)	168, 1651
XhoI	CTCGAG	1 cut(s)	563
XmiI	GTMKAC	1 cut(s)	1794
XmnI	GAANNNNTTC	1 cut(s)	1251
XspI	CTAG	8 cut(s)	18, 273, 629, 926, 1170, 1724, 1782, 2054
ZrmI	AGTACT	1 cut(s)	1168
Zsp2I	ATGCAT	1 cut(s)	2000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.