Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003454

Physical Location & Seq

Genomic Coordinates Reverse (-)

46322609 .. 46329137

Gene Structure 6529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG252000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGGTTCTGTCCCAGATGGTGGTAGCGGCTATGCGGGCACCGTTGTTAAGGCTTCGTGCGGCTTGGATGTATGGGGATTCGGCCCTAGATCAACCTATGGCGCAAGGGAAGCCTTGATGGCAGAGCATGACGGTGAGATGGCTTTGCTTGTTGAGGGTCTTGGAGTTGGGGGTGAGACATCTTTCGAGGAGTACATAATTGGTCCAGACAATGACCTTGTTGGTGACCATGAGTTATCTGTTGACAAGGATAAAATCAAATTATATGGGACTGAACAAGGTCAATCATGGGTTGCCAGACCTGTGACTGGACAAAGCACTATCGGCCTTGTGTCCCGGCATGGGAGCATGGCAAGTAAAAGCGGGCTTGTTGATCCTCTTGTCACACTCTTCGGCAGTGTTCATGAAAGGCTCCCTGATACAGGAAGCAAGGGCAGTATGCTTTTCCCACACTTTGGCAGCATGTTCAGTGTGGGAGGGAATCAACCCAGGCACGAAGAGTGGGATGAGGAGAGCCTTGCACCCAGAGAAGGCGATGACTATGCATCCGATGCAGGTGGCGGTGGCGATTCAGATGACAATTTGCATAGTCCATTGATCTCGCGTCAGACAACAAGCATTGAAAAGGGCATGGGCCCAACTAACCACGGAAGCCTTGTTAGCATGAGAAACAACAGTCTCCTAGGTGGCGATCCAGTCAGTAGCACTGGGATTGGTGGCGGTTGGCAGCTAGCATGGAAATGGTCTGAGAGAGATGGCCAGGATGGGCATAAGGAAGGAGGATTTAAAAGAATTTATTTGCACCAAGAAGGTGTCCCTGGATCTCGTCGTGGGTCTATTGTTTCAATACCTGGTGGTGATGTACCAGCAGATGGTGAGTTCATCCAGGCTTCTGCTTTGGTGAGCCAACCGGCTCTTTATTCCAGAGATCTTATCCAACAACATCATCCAGTTGGACCAGCAATGGTTCACCCAGCTGCAGCTTCTCGTAAAGGGACAACTTGGAGCAATCTTTTCGAACCAGGAGTCAAGCATGCTTTGGTTGTTGGTGTCGGAATTCAAATACTTCAGCAGTTCTCTGGCATAAATGGGGTTCTCTACTACACACCTCAAATTCTTGAGCAGGCCGGTGTTGGAGTGCTTCTTTCAAACCTTGGTCTTAGCTCAGCTTCTGCATCTCTGCTTATTAGTGGATTGACAACCTTATTGATGCTTCCTAGTATTGCTGTTGCCATGAGGCTTATGGATATCTCTGGCAGAAGGACCTTACTGCTCACCACAATCCCCATCTTGATACTTTCTCTCGTGATCCTAGTCCTTGGAAGCCTTGTGAATTTCGGTAGCGTTGTGAATGCAGCAATCTCAACTGGTAGCGTTGTGCTCTACTTCTGTTCCTTTGTGATGGGGTTCGGACCAGTCCCCAACATTCTCTGTGCAGAAATCTTCCCTACCCGGGTACGAGGTCTCTGCATTGCCATCTGTGCCCTCACGTTTTGGATTGGCGACATCATCGTCACCTACTCCCTCCCGGTGCTGCTCAAATCCGTCGGCCTTTCTGGCGTTTTTGGCATGTACGCTGTAGTGTGCGTCATTGCTTGGTTTTTTGTTTTCATGAAAGTTCCAGAAACGAAAGGCATGCCCCTTGAAGTTATCACCGAGTTCTTCTCTGTTGGTGCAAAGCAGGCTGCAGCTGCCAAGGACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0034219 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

568

Amino Acids

59.89

Weight (kDa)

5.39

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	329 - 555	4.4e-39	Sugar (and other) transporter
MFS_1	PF07690	381 - 544	6.3e-10	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003454)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10120 FvH4_2g16850 FvH4_5g25950
malus_domestica	MD02G1109600.v1.1 MD02G1109800.v1.1 MD02G1112000.v1.1 MD02G1112900.v1.1 MD15G1228400.v1.1
prunus_persica	Prupe.7G185700_v2.0.a1 Prupe.7G185800_v2.0.a1 Prupe.7G185800_v2.0.a1
pyrus_communis	pycom15g20350
rosa_chinensis	RchiOBHm_Chr2g0096891 RchiOBHm_Chr4g0410591 RchiOBHm_Chr5g0025901
rosa_laevigata	RLG00000008254 RLG00000016680
rosa_multiflora	Rmu_co8305667.1_g000001 Rmu_ssc0000215.1_g000005
rosa_roxburghii	Rroxscaffold_1G00071210 Rroxscaffold_2G00145180
rosa_rugosa	Rorug02G0061700 Rorug02G0061700
rosa_samantha	Rh2AG109600 Rh2BG111500 Rh2CG113600 Rh2DG112700 Rh4CG174500 Rh5CG197800 Rh5DG180200 Rh6BG252000 Rh7AG299900 Rh7CG318500 Rh7DG300100
rosa_wichuraiana	Rw2G008460 Rw5G016470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	545
AasI	GACNNNNNNGTC	1 cut(s)	1511
Acc36I	ACCTGC	1 cut(s)	545
AccB1I	GGYRCC	1 cut(s)	38
AccB7I	CCANNNNNTGG	3 cut(s)	20, 455, 872
AccII	CGCG	1 cut(s)	604
AciI	CCGC	6 cut(s)	27, 35, 60, 363, 561, 720
AclWI	GGATC	4 cut(s)	368, 686, 829, 1303
AcoI	YGGCCR	1 cut(s)	757
AcsI	RAATTY	4 cut(s)	792, 1056, 1113, 1333
AcuI	CTGAAG	1 cut(s)	1052
AfaI	GTAC	4 cut(s)	194, 864, 1458, 1574
AfiI	CCNNNNNNNGG	8 cut(s)	20, 308, 342, 422, 455, 530, 872, 1453
AgsI	TTSAA	5 cut(s)	623, 846, 1061, 1149, 1646
AjnI	CCWGG	6 cut(s)	488, 759, 817, 850, 885, 1021
AluBI	AGCT	6 cut(s)	730, 977, 983, 1164, 1169, 1691
AluI	AGCT	6 cut(s)	730, 977, 983, 1164, 1169, 1691
Alw21I	GWGCWC	1 cut(s)	1383
Alw26I	GTCTC	3 cut(s)	170, 683, 1469
AlwI	GGATC	4 cut(s)	368, 686, 829, 1303
AlwNI	CAGNNNCTG	1 cut(s)	1172
Ama87I	CYCGRG	1 cut(s)	1452
AoxI	GGCC	6 cut(s)	82, 325, 634, 757, 1125, 1549
ApaI	GGGCCC	1 cut(s)	638
ApeKI	GCWGC	9 cut(s)	459, 727, 977, 980, 1355, 1534, 1685, 1688, 1691
ApoI	RAATTY	4 cut(s)	792, 1056, 1113, 1333
ArsI	GACNNNNNNTTYG	2 cut(s)	1011, 1043
AspA2I	CCTAGG	1 cut(s)	682
AspLEI	GCGC	1 cut(s)	104
AspS9I	GGNCC	7 cut(s)	83, 203, 634, 635, 956, 1263, 1412
AsuC2I	CCSGG	4 cut(s)	337, 1453, 1454, 1529
AsuII	TTCGAA	1 cut(s)	1017
AsuNHI	GCTAGC	1 cut(s)	730
AvaI	CYCGRG	1 cut(s)	1452
AvaII	GGWCC	4 cut(s)	203, 956, 1263, 1412
AvrII	CCTAGG	1 cut(s)	682
BaeGI	GKGCMC	3 cut(s)	41, 638, 1486
BalI	TGGCCA	1 cut(s)	759
BanI	GGYRCC	1 cut(s)	38
BanII	GRGCYC	1 cut(s)	638
BauI	CACGAG	1 cut(s)	1304
Bbv12I	GWGCWC	1 cut(s)	1383
BbvI	GCAGC	9 cut(s)	471, 739, 964, 992, 1367, 1521, 1672, 1678, 1700
BccI	CCATC	9 cut(s)	11, 112, 133, 749, 758, 866, 1295, 1396, 1484
BcgI	CGANNNNNNTGC	8 cut(s)	524, 558, 997, 1031, 1449, 1483, 1618, 1652
BciT130I	CCWGG	6 cut(s)	490, 761, 819, 852, 887, 1023
BcnI	CCSGG	4 cut(s)	337, 1453, 1454, 1529
BcoDI	GTCTC	3 cut(s)	170, 683, 1469
BfaI	CTAG	5 cut(s)	87, 683, 731, 1218, 1313
BfmI	CTRYAG	3 cut(s)	978, 1578, 1686
BfuAI	ACCTGC	1 cut(s)	545
BglI	GCCNNNNNGGC	2 cut(s)	119, 1557
BglII	AGATCT	1 cut(s)	928
BlnI	CCTAGG	1 cut(s)	682
BlpI	GCTNAGC	1 cut(s)	1165
Bme18I	GGWCC	4 cut(s)	203, 956, 1263, 1412
BmeT110I	CYCGRG	1 cut(s)	1452
BmgT120I	GGNCC	7 cut(s)	83, 203, 634, 635, 956, 1263, 1412
BmiI	GGNNCC	3 cut(s)	40, 413, 636
BmrI	ACTGGG	1 cut(s)	717
BmsI	GCATC	4 cut(s)	541, 554, 1184, 1200
BmtI	GCTAGC	1 cut(s)	734
BmuI	ACTGGG	1 cut(s)	717
BplI	GAGNNNNNCTC	2 cut(s)	1649, 1681
Bpu1102I	GCTNAGC	1 cut(s)	1165
Bpu14I	TTCGAA	1 cut(s)	1017
BpuEI	CTTGAG	1 cut(s)	1139
BpuMI	CCSGG	4 cut(s)	337, 1453, 1454, 1529
BsaI	GGTCTC	1 cut(s)	1469
BsaJI	CCNNGG	8 cut(s)	488, 646, 682, 817, 1153, 1318, 1452, 1695
Bsc4I	CCNNNNNNNGG	8 cut(s)	20, 308, 342, 422, 455, 530, 872, 1453
Bse118I	RCCGGY	2 cut(s)	910, 1127
Bse1I	ACTGG	6 cut(s)	313, 695, 712, 950, 1372, 1415
Bse3DI	GCAATG	3 cut(s)	969, 1470, 1590
BseBI	CCWGG	6 cut(s)	490, 761, 819, 852, 887, 1023
BseDI	CCNNGG	8 cut(s)	488, 646, 682, 817, 1153, 1318, 1452, 1695
BseGI	GGATG	6 cut(s)	73, 511, 545, 769, 882, 946
BseLI	CCNNNNNNNGG	8 cut(s)	20, 308, 342, 422, 455, 530, 872, 1453
BseMI	GCAATG	3 cut(s)	969, 1470, 1590
BseMII	CTCAG	2 cut(s)	738, 1179
BseNI	ACTGG	6 cut(s)	313, 695, 712, 950, 1372, 1415
BseRI	GAGGAG	2 cut(s)	203, 524
BseSI	GKGCMC	3 cut(s)	41, 638, 1486
BseXI	GCAGC	9 cut(s)	471, 739, 964, 992, 1367, 1521, 1672, 1678, 1700
BseYI	CCCAGC	1 cut(s)	973
BsgI	GTGCAG	1 cut(s)	1455
Bsh1236I	CGCG	1 cut(s)	604
BshFI	GGCC	6 cut(s)	84, 327, 636, 759, 1127, 1551
BshNI	GGYRCC	1 cut(s)	38
BsiHKAI	GWGCWC	1 cut(s)	1383
BsiHKCI	CYCGRG	1 cut(s)	1452
BsiSI	CCGG	5 cut(s)	337, 911, 1128, 1453, 1529
BslFI	GGGAC	5 cut(s)	283, 319, 800, 1009, 1403
BslI	CCNNNNNNNGG	8 cut(s)	20, 308, 342, 422, 455, 530, 872, 1453
BsmAI	GTCTC	3 cut(s)	170, 683, 1469
BsmFI	GGGAC	5 cut(s)	283, 319, 800, 1009, 1403
BsmI	GAATGC	1 cut(s)	1357
BsnI	GGCC	6 cut(s)	84, 327, 636, 759, 1127, 1551
Bso31I	GGTCTC	1 cut(s)	1469
BsoBI	CYCGRG	1 cut(s)	1452
Bsp119I	TTCGAA	1 cut(s)	1017
Bsp120I	GGGCCC	1 cut(s)	634
Bsp1286I	GDGCHC	4 cut(s)	41, 638, 1383, 1486
Bsp143I	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
Bsp1720I	GCTNAGC	1 cut(s)	1165
BspACI	CCGC	6 cut(s)	27, 35, 60, 363, 561, 720
BspANI	GGCC	6 cut(s)	84, 327, 636, 759, 1127, 1551
BspCNI	CTCAG	2 cut(s)	739, 1178
BspFNI	CGCG	1 cut(s)	604
BspHI	TCATGA	2 cut(s)	403, 1611
BspLI	GGNNCC	3 cut(s)	40, 413, 636
BspMAI	CTGCAG	2 cut(s)	982, 1690
BspMI	ACCTGC	1 cut(s)	545
BspOI	GCTAGC	1 cut(s)	734
BspPI	GGATC	4 cut(s)	368, 686, 829, 1303
BspT104I	TTCGAA	1 cut(s)	1017
BspT107I	GGYRCC	1 cut(s)	38
BspTNI	GGTCTC	1 cut(s)	1469
BsrDI	GCAATG	3 cut(s)	969, 1470, 1590
BsrFI	RCCGGY	2 cut(s)	910, 1127
BsrI	ACTGG	6 cut(s)	313, 695, 712, 950, 1372, 1415
BssAI	RCCGGY	2 cut(s)	910, 1127
BssECI	CCNNGG	8 cut(s)	488, 646, 682, 817, 1153, 1318, 1452, 1695
BssMI	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
BssSI	CACGAG	1 cut(s)	1304
BssT1I	CCWWGG	4 cut(s)	682, 1153, 1318, 1695
Bst2BI	CACGAG	1 cut(s)	1304
Bst2UI	CCWGG	6 cut(s)	490, 761, 819, 852, 887, 1023
Bst4CI	ACNGT	3 cut(s)	43, 134, 677
Bst6I	CTCTTC	2 cut(s)	395, 492
BstAPI	GCANNNNNTGC	1 cut(s)	551
BstBI	TTCGAA	1 cut(s)	1017
BstC8I	GCNNGC	7 cut(s)	37, 365, 732, 1035, 1125, 1637, 1683
BstDEI	CTNAG	3 cut(s)	747, 1160, 1165
BstDSI	CCRYGG	1 cut(s)	646
BstEII	GGTNACC	1 cut(s)	224
BstENI	CCTNNNNNAGG	1 cut(s)	420
BstF5I	GGATG	6 cut(s)	73, 511, 545, 769, 882, 946
BstFNI	CGCG	1 cut(s)	604
BstHHI	GCGC	1 cut(s)	104
BstKTI	GATC	7 cut(s)	92, 376, 600, 694, 824, 931, 1311
BstMAI	GTCTC	3 cut(s)	170, 683, 1469
BstMBI	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
BstNI	CCWGG	6 cut(s)	490, 761, 819, 852, 887, 1023
BstNSI	RCATGY	4 cut(s)	466, 1037, 1573, 1639
BstPI	GGTNACC	1 cut(s)	224
BstSFI	CTRYAG	3 cut(s)	978, 1578, 1686
BstSLI	GKGCMC	3 cut(s)	41, 638, 1486
BstUI	CGCG	1 cut(s)	604
BstV1I	GCAGC	9 cut(s)	471, 739, 964, 992, 1367, 1521, 1672, 1678, 1700
BstX2I	RGATCY	2 cut(s)	821, 928
BstYI	RGATCY	2 cut(s)	821, 928
BsuRI	GGCC	6 cut(s)	84, 327, 636, 759, 1127, 1551
BtgI	CCRYGG	1 cut(s)	646
BtgZI	GCGATG	1 cut(s)	549
BtsCI	GGATG	6 cut(s)	73, 511, 545, 769, 882, 946
BtsI	GCAGTG	1 cut(s)	403
BtsIMutI	CAGTG	3 cut(s)	403, 475, 705
BveI	ACCTGC	1 cut(s)	545
Cac8I	GCNNGC	7 cut(s)	37, 365, 732, 1035, 1125, 1637, 1683
CaiI	CAGNNNCTG	1 cut(s)	1172
CciI	TCATGA	2 cut(s)	403, 1611
CfoI	GCGC	1 cut(s)	104
Cfr10I	RCCGGY	2 cut(s)	910, 1127
Cfr13I	GGNCC	7 cut(s)	83, 203, 634, 635, 956, 1263, 1412
Cfr9I	CCCGGG	1 cut(s)	1452
CseI	GACGC	2 cut(s)	593, 1576
CsiI	ACCWGGT	1 cut(s)	850
Csp6I	GTAC	4 cut(s)	193, 863, 1457, 1573
CviQI	GTAC	4 cut(s)	193, 863, 1457, 1573
DdeI	CTNAG	3 cut(s)	747, 1160, 1165
DpnI	GATC	7 cut(s)	91, 375, 599, 693, 823, 930, 1310
DpnII	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
DraI	TTTAAA	1 cut(s)	787
DrdI	GACNNNNNNGTC	1 cut(s)	1511
DseDI	GACNNNNNNGTC	1 cut(s)	1511
EaeI	YGGCCR	1 cut(s)	757
Eam1104I	CTCTTC	2 cut(s)	395, 492
EarI	CTCTTC	2 cut(s)	395, 492
Eco130I	CCWWGG	4 cut(s)	682, 1153, 1318, 1695
Eco24I	GRGCYC	1 cut(s)	638
Eco31I	GGTCTC	1 cut(s)	1469
Eco32I	GATATC	1 cut(s)	1249
Eco47I	GGWCC	4 cut(s)	203, 956, 1263, 1412
Eco57I	CTGAAG	1 cut(s)	1052
Eco88I	CYCGRG	1 cut(s)	1452
Eco91I	GGTNACC	1 cut(s)	224
EcoNI	CCTNNNNNAGG	1 cut(s)	420
EcoO109I	RGGNCCY	1 cut(s)	1263
EcoO65I	GGTNACC	1 cut(s)	224
EcoRI	GAATTC	1 cut(s)	1056
EcoRII	CCWGG	6 cut(s)	488, 759, 817, 850, 885, 1021
EcoRV	GATATC	1 cut(s)	1249
EcoT14I	CCWWGG	4 cut(s)	682, 1153, 1318, 1695
EcoT22I	ATGCAT	1 cut(s)	547
EcoT38I	GRGCYC	1 cut(s)	638
ErhI	CCWWGG	4 cut(s)	682, 1153, 1318, 1695
FaqI	GGGAC	5 cut(s)	283, 319, 800, 1009, 1403
FauI	CCCGC	2 cut(s)	28, 356
FokI	GGATG	6 cut(s)	80, 518, 532, 776, 869, 933
FriOI	GRGCYC	1 cut(s)	638
FspBI	CTAG	5 cut(s)	87, 683, 731, 1218, 1313
GlaI	GCGC	1 cut(s)	103
GsaI	CCCAGC	1 cut(s)	977
HaeIII	GGCC	6 cut(s)	84, 327, 636, 759, 1127, 1551
HapII	CCGG	5 cut(s)	337, 911, 1128, 1453, 1529
HgaI	GACGC	2 cut(s)	593, 1576
HhaI	GCGC	1 cut(s)	104
Hin6I	GCGC	1 cut(s)	102
HinP1I	GCGC	1 cut(s)	102
HincII	GTYRAC	1 cut(s)	244
HindII	GTYRAC	1 cut(s)	244
HinfI	GANTC	4 cut(s)	78, 481, 569, 1026
HpaII	CCGG	5 cut(s)	337, 911, 1128, 1453, 1529
Hpy166II	GTNNAC	2 cut(s)	244, 970
Hpy188I	TCNGA	6 cut(s)	550, 574, 609, 748, 1055, 1412
Hpy188III	TCNNGA	8 cut(s)	206, 404, 924, 1118, 1291, 1306, 1612, 1622
Hpy8I	GTNNAC	2 cut(s)	244, 970
Hpy99I	CGWCG	2 cut(s)	831, 1550
HpyAV	CCTTC	4 cut(s)	524, 770, 803, 1254
HpyCH4III	ACNGT	3 cut(s)	43, 134, 677
HpyCH4IV	ACGT	1 cut(s)	1490
HpyF3I	CTNAG	3 cut(s)	747, 1160, 1165
HpySE526I	ACGT	1 cut(s)	1490
HspAI	GCGC	1 cut(s)	102
Kzo9I	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
LmnI	GCTCC	3 cut(s)	345, 417, 1005
Lsp1109I	GCAGC	9 cut(s)	471, 739, 964, 992, 1367, 1521, 1672, 1678, 1700
LweI	GCATC	4 cut(s)	541, 554, 1184, 1200
MabI	ACCWGGT	1 cut(s)	850
MaeI	CTAG	5 cut(s)	87, 683, 731, 1218, 1313
MaeII	ACGT	1 cut(s)	1490
MaeIII	GTNAC	4 cut(s)	224, 304, 382, 1513
MalI	GATC	7 cut(s)	91, 375, 599, 693, 823, 930, 1310
MboI	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
MboII	GAAGA	4 cut(s)	382, 509, 1435, 1654
MflI	RGATCY	2 cut(s)	821, 928
MhlI	GDGCHC	4 cut(s)	41, 638, 1383, 1486
MlsI	TGGCCA	1 cut(s)	759
MluCI	AATT	8 cut(s)	198, 260, 580, 792, 1056, 1113, 1333, 1702
MluNI	TGGCCA	1 cut(s)	759
MlyI	GAGTC	1 cut(s)	1035
MmeI	TCCRAC	4 cut(s)	934, 961, 1033, 1114
Mox20I	TGGCCA	1 cut(s)	759
Mph1103I	ATGCAT	1 cut(s)	547
MscI	TGGCCA	1 cut(s)	759
MseI	TTAA	2 cut(s)	48, 786
MslI	CAYNNNNRTG	2 cut(s)	132, 739
Msp20I	TGGCCA	1 cut(s)	759
MspA1I	CMGCKG	2 cut(s)	977, 1691
MspI	CCGG	5 cut(s)	337, 911, 1128, 1453, 1529
Mva1269I	GAATGC	1 cut(s)	1357
MvaI	CCWGG	6 cut(s)	490, 761, 819, 852, 887, 1023
MvnI	CGCG	1 cut(s)	604
NciI	CCSGG	4 cut(s)	337, 1453, 1454, 1529
NdeII	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
NheI	GCTAGC	1 cut(s)	730
NlaIV	GGNNCC	3 cut(s)	40, 413, 636
NmuCI	GTSAC	4 cut(s)	224, 304, 382, 1513
NsiI	ATGCAT	1 cut(s)	547
NspI	RCATGY	4 cut(s)	466, 1037, 1573, 1639
NspV	TTCGAA	1 cut(s)	1017
PaeI	GCATGC	2 cut(s)	1037, 1639
PagI	TCATGA	2 cut(s)	403, 1611
PaqCI	CACCTGC	1 cut(s)	545
PctI	GAATGC	1 cut(s)	1357
PfeI	GAWTC	3 cut(s)	78, 481, 569
PflMI	CCANNNNNTGG	3 cut(s)	20, 455, 872
PleI	GAGTC	1 cut(s)	1034
PpsI	GAGTC	1 cut(s)	1034
PpuMI	RGGWCCY	1 cut(s)	1263
Psp5II	RGGWCCY	1 cut(s)	1263
Psp6I	CCWGG	6 cut(s)	488, 759, 817, 850, 885, 1021
PspEI	GGTNACC	1 cut(s)	224
PspFI	CCCAGC	1 cut(s)	973
PspGI	CCWGG	6 cut(s)	488, 759, 817, 850, 885, 1021
PspN4I	GGNNCC	3 cut(s)	40, 413, 636
PspOMI	GGGCCC	1 cut(s)	634
PspPI	GGNCC	7 cut(s)	83, 203, 634, 635, 956, 1263, 1412
PspPPI	RGGWCCY	1 cut(s)	1263
PstI	CTGCAG	2 cut(s)	982, 1690
PstNI	CAGNNNCTG	1 cut(s)	1172
PsuI	RGATCY	2 cut(s)	821, 928
PvuII	CAGCTG	2 cut(s)	977, 1691
RsaI	GTAC	4 cut(s)	194, 864, 1458, 1574
RsaNI	GTAC	4 cut(s)	193, 863, 1457, 1573
RseI	CAYNNNNRTG	2 cut(s)	132, 739
SaqAI	TTAA	2 cut(s)	48, 786
Sau3AI	GATC	7 cut(s)	89, 373, 597, 691, 821, 928, 1308
Sau96I	GGNCC	7 cut(s)	83, 203, 634, 635, 956, 1263, 1412
SchI	GAGTC	1 cut(s)	1035
SduI	GDGCHC	4 cut(s)	41, 638, 1383, 1486
SexAI	ACCWGGT	1 cut(s)	850
SfaNI	GCATC	4 cut(s)	541, 554, 1184, 1200
SfcI	CTRYAG	3 cut(s)	978, 1578, 1686
SfuI	TTCGAA	1 cut(s)	1017
SinI	GGWCC	4 cut(s)	203, 956, 1263, 1412
SmaI	CCCGGG	1 cut(s)	1454
SmiMI	CAYNNNNRTG	2 cut(s)	132, 739
SmlI	CTYRAG	1 cut(s)	1118
SmoI	CTYRAG	1 cut(s)	1118
SphI	GCATGC	2 cut(s)	1037, 1639
Sse9I	AATT	8 cut(s)	198, 260, 580, 792, 1056, 1113, 1333, 1702
SsiI	CCGC	6 cut(s)	27, 35, 60, 363, 561, 720
SspMI	CTAG	5 cut(s)	87, 683, 731, 1218, 1313
StyI	CCWWGG	4 cut(s)	682, 1153, 1318, 1695
TaaI	ACNGT	3 cut(s)	43, 134, 677
TaiI	ACGT	1 cut(s)	1493
TaqI	TCGA	2 cut(s)	186, 1017
TasI	AATT	8 cut(s)	198, 260, 580, 792, 1056, 1113, 1333, 1702
TatI	WGTACW	1 cut(s)	192
TauI	GCSGC	2 cut(s)	30, 63
TfiI	GAWTC	3 cut(s)	78, 481, 569
Tru1I	TTAA	2 cut(s)	48, 786
Tru9I	TTAA	2 cut(s)	48, 786
TscAI	CASTG	3 cut(s)	403, 475, 712
TseFI	GTSAC	4 cut(s)	224, 304, 382, 1513
TseI	GCWGC	9 cut(s)	459, 727, 977, 980, 1355, 1534, 1685, 1688, 1691
Tsp45I	GTSAC	4 cut(s)	224, 304, 382, 1513
TspDTI	ATGAA	5 cut(s)	392, 420, 871, 1600, 1628
TspGWI	ACGGA	2 cut(s)	663, 1534
TspMI	CCCGGG	1 cut(s)	1452
TspRI	CASTG	3 cut(s)	403, 475, 712
Van91I	CCANNNNNTGG	3 cut(s)	20, 455, 872
VpaK11BI	GGWCC	4 cut(s)	203, 956, 1263, 1412
XagI	CCTNNNNNAGG	1 cut(s)	420
XapI	RAATTY	4 cut(s)	792, 1056, 1113, 1333
XceI	RCATGY	4 cut(s)	466, 1037, 1573, 1639
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1240
XmaI	CCCGGG	1 cut(s)	1452
XmaJI	CCTAGG	1 cut(s)	682
XspI	CTAG	5 cut(s)	87, 683, 731, 1218, 1313
Zsp2I	ATGCAT	1 cut(s)	547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.