Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0003454

Physical Location & Seq

Genomic Coordinates Forward (+)

8432063 .. 8435279

Gene Structure 3217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G008460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGTTCATATTTAGCTCTAGTTGTTTCACAAAAATTAATATTGCAGGGTCTGTTCTTTATATAAAAAAGGAATTCAATTTAGAAAGTGAGCCGACATTTGAAGGGCTTATTGTAGCAACATCACTCATTGGAGCCACATTGATCACAACATTTTCTGGGCCAGCATCGGATTGGCTGGGGCGGCGAACAATGCTCATAATGTCATCACTGTTTTTCTTTGTTAGTGGTCTGGTAATGTTGTGGTCTCCAAATGTTTATGTCTTGCTTTTGGCTAGGTTGTTAGATGGTTTTGGAACCGGTTTGGCTGTTACTCTTGTTCCTGCTTATATATCTGAGATAGCGCCACCGGATATTAGAGGAAGACTGAATACACTTCCACAGTTCACTGGTTCTGGTGGGATGTTCTTGTCTTATTGTATGGTGTTTGGAATGTCATTGATGGATACACCAAAGTGGAGATTGATGCTCGGTGTTTTGTCCATTCCATCATTAGCTTATTTCGCTTTGACAATACTTTACCTGCCTGAATCTCCTCGGTGGCTTGTGAGTAAGGGTCGAATCCTCGAGGCAAAACAAGTGCTGCAAAGACTTAATGGCAGGGAAGATGTTTCAGGTGAGTTGGCTTTGCTAGTTGAAGGTCTAAACACTGGCAAAGATACATCATTGGAAGAGTACATTATTAGTCCAGCCAATGTGCTTAACCAGGCAACAACTGAAGAGAAGTACCAAATAAGGTTATATGGGGATGAAGAGGGAGTATCATATATTGCTAAACCAGTAACTGGACAGAGTTTGACATCTCGCCATGGGAGTGCTACAAACCAAAGTAGCATCTCTCTTAAGGATCCTCTTGTGACGCTCTTTAGTAGTGTCCATGAGAAGCTCTCTGAGAGAGGAGGAAGCAAGGGCAGCAGCATGCTTCCATTTCTAGGCAGTGTTCTGGTTAATGCTGGGGAGCATCACAGTAAGCATTGGGACATGGAGAGCCAAAGCGACGATGAGGACAATGAATCAGAAACATCCGGGGCTTATGGTGATGACAGTTTGAGAAGTCCATTGATCTCGCGTCAAACAACAAGTGTGGACAAGGACATTGCTACTCCTAAATCTGGTGGAAGTGTTTTAGGTGTAAGAGGCAATACCATTCTTAATGCTGTTGAGGCAGGTAGTACTAGTAGTATAGATATTGGTGGTGGTTGGCAGCTTGCTTATAAATATGCTGAGCGAGTAAGTGAAGATGGGAAGAAGGAAGGAGTTCAAAGAGTCTATTTGCACCAGGAGAGTGCACTTGGGTCTCAACCTGCGTCGGTTGTTTCCATTTCTGGTGTAAGGCAAGAAAATGGAGCAATTCAGGCTGCTGCTTTGGTTAGTCCACCGATGGTTCTTCCACCAGAAGCTGTTGTTAAAGGTTCAAAATGGAGAGAGCTTTTGGAACCAGGAGTCAAGCGCGCATTGGTTGTCGGGATAGGACTTCAAGTTCTTGAGCAGATTGCTGGCATAAATGGGGTTCTCTACTACACTCCTCAGATTTATGAGCGAACAGGCGTAACAGTTCTTCTGTCTAACATAGGACTGAATTCGGCTTCTGCATCTCTCTTCTTAAGTGCCATCACAACATTCTTAATGCTTCCTTGCATAGCTACTTCCATGTGGCTTATGGATATAGCTGGCAGAAGGTCTTTGCTGCTATCCACATTACCAATACTGATAGTGGTGCTTGCTTTACTAGTGTTTGGCAGCATTGTCAACTTAGGCACTATTTGGACTGCAACAATATCCACTGCTAGTGTATTGGTCTACCTCTGCTGCTTCGTCATGGGCTTCGGGGTAATCCCAAATATTCTTTGTGCAGAGATCTTCCCTACTCGCGTCCGTGGCCTCTGCATTGCCATTTGTGCTCTCACTTATTGGATTGGAGACATCATCATCACTTACTCATTCCCTGTCATGCTCTCCTCCATTGGTTTTGCTGGTGTCTTTGGAATCTACGTTGTCGGATGCAGCATCTCCTGGATATTTGTTTACTTGAAAGTTCCCGAAACCAAGGGCATGCCTCTAGAAGTGATTTCTGAGTTCTTTGCTGCTGGAGTAAAACCAGCTTCAGATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

703

Amino Acids

75.74

Weight (kDa)

5.44

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	5 - 183	1.2e-20	Major Facilitator Superfamily
Sugar_tr	PF00083	34 - 224	2.6e-48	Sugar (and other) transporter
Sugar_tr	PF00083	471 - 693	3.7e-36	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003454)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10120 FvH4_2g16850 FvH4_5g25950
malus_domestica	MD02G1109600.v1.1 MD02G1109800.v1.1 MD02G1112000.v1.1 MD02G1112900.v1.1 MD15G1228400.v1.1
prunus_persica	Prupe.7G185700_v2.0.a1 Prupe.7G185800_v2.0.a1 Prupe.7G185800_v2.0.a1
pyrus_communis	pycom15g20350
rosa_chinensis	RchiOBHm_Chr2g0096891 RchiOBHm_Chr4g0410591 RchiOBHm_Chr5g0025901
rosa_laevigata	RLG00000008254 RLG00000016680
rosa_multiflora	Rmu_co8305667.1_g000001 Rmu_ssc0000215.1_g000005
rosa_roxburghii	Rroxscaffold_1G00071210 Rroxscaffold_2G00145180
rosa_rugosa	Rorug02G0061700 Rorug02G0061700
rosa_samantha	Rh2AG109600 Rh2BG111500 Rh2CG113600 Rh2DG112700 Rh4CG174500 Rh5CG197800 Rh5DG180200 Rh6BG252000 Rh7AG299900 Rh7CG318500 Rh7DG300100
rosa_wichuraiana	Rw2G008460 Rw5G016470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1212
AbsI	CCTCGAGG	1 cut(s)	563
Acc36I	ACCTGC	3 cut(s)	528, 1154, 1309
AccB7I	CCANNNNNTGG	1 cut(s)	782
AccI	GTMKAC	1 cut(s)	1797
AccII	CGCG	3 cut(s)	1066, 1449, 1869
AciI	CCGC	1 cut(s)	181
AclWI	GGATC	2 cut(s)	839, 852
AcsI	RAATTY	2 cut(s)	71, 1576
AcuI	CTGAAG	2 cut(s)	735, 2085
AfaI	GTAC	3 cut(s)	674, 725, 1171
AfiI	CCNNNNNNNGG	3 cut(s)	782, 929, 1109
AflII	CTTAAG	2 cut(s)	839, 1600
AgeI	ACCGGT	1 cut(s)	296
AgsI	TTSAA	7 cut(s)	76, 101, 635, 1259, 1413, 1475, 2029
AhlI	ACTAGT	2 cut(s)	1172, 1726
AjnI	CCWGG	4 cut(s)	702, 1275, 1435, 2009
AleI	CACNNNNGTG	1 cut(s)	451
AloI	GAACNNNNNNTCC	2 cut(s)	1461, 1493
AluBI	AGCT	9 cut(s)	15, 494, 883, 1204, 1397, 1426, 1640, 1667, 2099
AluI	AGCT	9 cut(s)	15, 494, 883, 1204, 1397, 1426, 1640, 1667, 2099
Alw21I	GWGCWC	2 cut(s)	1288, 1900
Alw26I	GTCTC	3 cut(s)	249, 1299, 1911
Alw44I	GTGCAC	1 cut(s)	1284
AlwI	GGATC	2 cut(s)	839, 852
AlwNI	CAGNNNCTG	3 cut(s)	50, 782, 1397
Ama87I	CYCGRG	1 cut(s)	563
AoxI	GGCC	2 cut(s)	158, 1876
ApaLI	GTGCAC	1 cut(s)	1284
ApoI	RAATTY	2 cut(s)	71, 1576
AseI	ATTAAT	1 cut(s)	36
AsiGI	ACCGGT	1 cut(s)	296
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspLEI	GCGC	3 cut(s)	343, 1449, 1451
AspS9I	GGNCC	1 cut(s)	158
AsuC2I	CCSGG	1 cut(s)	1024
AsuHPI	GGTGA	2 cut(s)	626, 1046
AvaI	CYCGRG	1 cut(s)	563
BaeGI	GKGCMC	1 cut(s)	1288
BamHI	GGATCC	1 cut(s)	844
BarI	GAAGNNNNNNTAC	4 cut(s)	352, 384, 1539, 1571
BbsI	GAAGAC	1 cut(s)	367
Bbv12I	GWGCWC	2 cut(s)	1288, 1900
BccI	CCATC	6 cut(s)	278, 433, 493, 1232, 1372, 1616
BciT130I	CCWGG	4 cut(s)	704, 1277, 1437, 2011
BciVI	GTATCC	1 cut(s)	436
BclI	TGATCA	1 cut(s)	141
BcnI	CCSGG	1 cut(s)	1024
BcoDI	GTCTC	3 cut(s)	249, 1299, 1911
BcuI	ACTAGT	2 cut(s)	1172, 1726
BfaI	CTAG	8 cut(s)	18, 273, 629, 929, 1173, 1727, 1785, 2057
BfoI	RGCGCY	1 cut(s)	344
BfrI	CTTAAG	2 cut(s)	839, 1600
BfuAI	ACCTGC	3 cut(s)	528, 1154, 1309
BfuI	GTATCC	1 cut(s)	436
BglII	AGATCT	1 cut(s)	1854
BlpI	GCTNAGC	1 cut(s)	1221
BmcAI	AGTACT	1 cut(s)	1171
Bme1390I	CCNGG	5 cut(s)	704, 1024, 1277, 1437, 2011
BmeT110I	CYCGRG	1 cut(s)	563
BmgT120I	GGNCC	1 cut(s)	158
BmiI	GGNNCC	4 cut(s)	133, 295, 846, 1434
BmrFI	CCNGG	5 cut(s)	704, 1024, 1277, 1437, 2011
BmsI	GCATC	7 cut(s)	173, 453, 840, 967, 1598, 1988, 2013
BpiI	GAAGAC	1 cut(s)	367
BplI	GAGNNNNNCTC	2 cut(s)	869, 901
BpmI	CTGGAG	1 cut(s)	2106
Bpu1102I	GCTNAGC	1 cut(s)	1221
BpuEI	CTTGAG	1 cut(s)	1502
BpuMI	CCSGG	1 cut(s)	1024
BsaI	GGTCTC	2 cut(s)	249, 1299
BsaJI	CCNNGG	5 cut(s)	533, 805, 1023, 1873, 2043
BsaWI	WCCGGW	2 cut(s)	296, 346
Bsc4I	CCNNNNNNNGG	3 cut(s)	782, 929, 1109
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	4 cut(s)	391, 652, 776, 787
Bse3DI	GCAATG	2 cut(s)	1092, 1884
BseBI	CCWGG	4 cut(s)	704, 1277, 1437, 2011
BseDI	CCNNGG	5 cut(s)	533, 805, 1023, 1873, 2043
BseGI	GGATG	4 cut(s)	405, 751, 1019, 2003
BseLI	CCNNNNNNNGG	3 cut(s)	782, 929, 1109
BseMI	GCAATG	2 cut(s)	1092, 1884
BseMII	CTCAG	5 cut(s)	324, 879, 1212, 1538, 2061
BseNI	ACTGG	4 cut(s)	391, 652, 776, 787
BsePI	GCGCGC	1 cut(s)	1447
BseRI	GAGGAG	4 cut(s)	522, 909, 1512, 1945
BseSI	GKGCMC	1 cut(s)	1288
BseYI	CCCAGC	2 cut(s)	175, 950
BsgI	GTGCAG	1 cut(s)	1869
Bsh1236I	CGCG	3 cut(s)	1066, 1449, 1869
BshFI	GGCC	2 cut(s)	160, 1878
BshTI	ACCGGT	1 cut(s)	296
BsiHKAI	GWGCWC	2 cut(s)	1288, 1900
BsiHKCI	CYCGRG	1 cut(s)	563
BsiSI	CCGG	3 cut(s)	297, 347, 1023
BslFI	GGGAC	1 cut(s)	989
BslI	CCNNNNNNNGG	3 cut(s)	782, 929, 1109
BsmAI	GTCTC	3 cut(s)	249, 1299, 1911
BsmFI	GGGAC	1 cut(s)	989
BsnI	GGCC	2 cut(s)	160, 1878
Bso31I	GGTCTC	2 cut(s)	249, 1299
BsoBI	CYCGRG	1 cut(s)	563
Bsp1286I	GDGCHC	2 cut(s)	1288, 1900
Bsp143I	GATC	4 cut(s)	141, 844, 1059, 1854
Bsp1720I	GCTNAGC	1 cut(s)	1221
Bsp19I	CCATGG	1 cut(s)	805
BspACI	CCGC	1 cut(s)	181
BspANI	GGCC	2 cut(s)	160, 1878
BspCNI	CTCAG	5 cut(s)	325, 880, 1213, 1537, 2062
BspFNI	CGCG	3 cut(s)	1066, 1449, 1869
BspLI	GGNNCC	4 cut(s)	133, 295, 846, 1434
BspMI	ACCTGC	3 cut(s)	528, 1154, 1309
BspPI	GGATC	2 cut(s)	839, 852
BspTI	CTTAAG	2 cut(s)	839, 1600
BspTNI	GGTCTC	2 cut(s)	249, 1299
BsrDI	GCAATG	2 cut(s)	1092, 1884
BsrFI	RCCGGY	1 cut(s)	296
BsrI	ACTGG	4 cut(s)	391, 652, 776, 787
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	5 cut(s)	533, 805, 1023, 1873, 2043
BssHII	GCGCGC	1 cut(s)	1447
BssMI	GATC	4 cut(s)	141, 844, 1059, 1854
BssT1I	CCWWGG	2 cut(s)	805, 2043
Bst2UI	CCWGG	4 cut(s)	704, 1277, 1437, 2011
Bst4CI	ACNGT	5 cut(s)	210, 381, 965, 1043, 1552
Bst6I	CTCTTC	4 cut(s)	663, 711, 744, 1601
BstAFI	CTTAAG	2 cut(s)	839, 1600
BstC8I	GCNNGC	8 cut(s)	162, 917, 1206, 1449, 1495, 1669, 1719, 2051
BstDEI	CTNAG	6 cut(s)	333, 888, 1221, 1524, 1750, 2070
BstDSI	CCRYGG	2 cut(s)	805, 1873
BstF5I	GGATG	4 cut(s)	405, 751, 1019, 2003
BstFNI	CGCG	3 cut(s)	1066, 1449, 1869
BstH2I	RGCGCY	1 cut(s)	344
BstHHI	GCGC	3 cut(s)	343, 1449, 1451
BstKTI	GATC	4 cut(s)	144, 847, 1062, 1857
BstMAI	GTCTC	3 cut(s)	249, 1299, 1911
BstMBI	GATC	4 cut(s)	141, 844, 1059, 1854
BstMWI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 909, 1160, 1352, 1875, 1895
BstNI	CCWGG	4 cut(s)	704, 1277, 1437, 2011
BstNSI	RCATGY	2 cut(s)	919, 2053
BstSCI	CCNGG	5 cut(s)	702, 1022, 1275, 1435, 2009
BstSLI	GKGCMC	1 cut(s)	1288
BstUI	CGCG	3 cut(s)	1066, 1449, 1869
BstV2I	GAAGAC	1 cut(s)	367
BstX2I	RGATCY	2 cut(s)	844, 1854
BstYI	RGATCY	2 cut(s)	844, 1854
BsuI	GTATCC	1 cut(s)	436
BsuRI	GGCC	2 cut(s)	160, 1878
BtgI	CCRYGG	2 cut(s)	805, 1873
BtsCI	GGATG	4 cut(s)	405, 751, 1019, 2003
BtsI	GCAGTG	2 cut(s)	940, 1779
BtsIMutI	CAGTG	5 cut(s)	206, 384, 645, 940, 1779
BveI	ACCTGC	3 cut(s)	528, 1154, 1309
Cac8I	GCNNGC	8 cut(s)	162, 917, 1206, 1449, 1495, 1669, 1719, 2051
CaiI	CAGNNNCTG	3 cut(s)	50, 782, 1397
CfoI	GCGC	3 cut(s)	343, 1449, 1451
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	1 cut(s)	158
CseI	GACGC	4 cut(s)	865, 1055, 1293, 1858
Csp6I	GTAC	3 cut(s)	673, 724, 1170
CspAI	ACCGGT	1 cut(s)	296
CspCI	CAANNNNNGTGG	2 cut(s)	1062, 1097
CviAII	CATG	8 cut(s)	806, 875, 916, 979, 1648, 1816, 1948, 2050
CviQI	GTAC	3 cut(s)	673, 724, 1170
DdeI	CTNAG	6 cut(s)	333, 888, 1221, 1524, 1750, 2070
DpnI	GATC	4 cut(s)	143, 846, 1061, 1856
DpnII	GATC	4 cut(s)	141, 844, 1059, 1854
Eam1104I	CTCTTC	4 cut(s)	663, 711, 744, 1601
EarI	CTCTTC	4 cut(s)	663, 711, 744, 1601
Eco130I	CCWWGG	2 cut(s)	805, 2043
Eco31I	GGTCTC	2 cut(s)	249, 1299
Eco57I	CTGAAG	2 cut(s)	735, 2085
Eco88I	CYCGRG	1 cut(s)	563
EcoRI	GAATTC	2 cut(s)	71, 1576
EcoRII	CCWGG	4 cut(s)	702, 1275, 1435, 2009
EcoT14I	CCWWGG	2 cut(s)	805, 2043
ErhI	CCWWGG	2 cut(s)	805, 2043
FaeI	CATG	8 cut(s)	809, 878, 919, 982, 1651, 1819, 1951, 2053
FaqI	GGGAC	1 cut(s)	989
FatI	CATG	8 cut(s)	805, 874, 915, 978, 1647, 1815, 1947, 2049
FbaI	TGATCA	1 cut(s)	141
FblI	GTMKAC	1 cut(s)	1797
FokI	GGATG	4 cut(s)	412, 758, 1006, 2010
FspBI	CTAG	8 cut(s)	18, 273, 629, 929, 1173, 1727, 1785, 2057
GlaI	GCGC	3 cut(s)	342, 1448, 1450
GsaI	CCCAGC	2 cut(s)	179, 954
GsuI	CTGGAG	1 cut(s)	2106
HaeII	RGCGCY	1 cut(s)	344
HaeIII	GGCC	2 cut(s)	160, 1878
HapII	CCGG	3 cut(s)	297, 347, 1023
HgaI	GACGC	4 cut(s)	865, 1055, 1293, 1858
HhaI	GCGC	3 cut(s)	343, 1449, 1451
Hin1II	CATG	8 cut(s)	809, 878, 919, 982, 1651, 1819, 1951, 2053
Hin6I	GCGC	3 cut(s)	341, 1447, 1449
HinP1I	GCGC	3 cut(s)	341, 1447, 1449
HincII	GTYRAC	1 cut(s)	1747
HindII	GTYRAC	1 cut(s)	1747
HinfI	GANTC	6 cut(s)	527, 558, 1010, 1263, 1440, 1983
HpaII	CCGG	3 cut(s)	297, 347, 1023
HphI	GGTGA	2 cut(s)	626, 1046
Hpy166II	GTNNAC	7 cut(s)	384, 1084, 1286, 1373, 1747, 1798, 2023
Hpy188I	TCNGA	8 cut(s)	169, 334, 889, 1015, 1527, 1997, 2071, 2104
Hpy188III	TCNNGA	4 cut(s)	1462, 1481, 2036, 2057
Hpy8I	GTNNAC	7 cut(s)	384, 1084, 1286, 1373, 1747, 1798, 2023
Hpy99I	CGWCG	2 cut(s)	998, 1309
HpyAV	CCTTC	5 cut(s)	95, 629, 1240, 1244, 1668
HpyCH4III	ACNGT	5 cut(s)	210, 381, 965, 1043, 1552
HpyCH4IV	ACGT	1 cut(s)	1989
HpyF10VI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 909, 1160, 1352, 1875, 1895
HpyF3I	CTNAG	6 cut(s)	333, 888, 1221, 1524, 1750, 2070
HpySE526I	ACGT	1 cut(s)	1989
Hsp92II	CATG	8 cut(s)	809, 878, 919, 982, 1651, 1819, 1951, 2053
HspAI	GCGC	3 cut(s)	341, 1447, 1449
Ksp22I	TGATCA	1 cut(s)	141
Kzo9I	GATC	4 cut(s)	141, 844, 1059, 1854
LmnI	GCTCC	3 cut(s)	131, 955, 1343
LweI	GCATC	7 cut(s)	173, 453, 840, 967, 1598, 1988, 2013
MaeI	CTAG	8 cut(s)	18, 273, 629, 929, 1173, 1727, 1785, 2057
MaeII	ACGT	1 cut(s)	1989
MaeIII	GTNAC	4 cut(s)	307, 778, 853, 1546
MalI	GATC	4 cut(s)	143, 846, 1061, 1856
MboI	GATC	4 cut(s)	141, 844, 1059, 1854
MflI	RGATCY	2 cut(s)	844, 1854
MhlI	GDGCHC	2 cut(s)	1288, 1900
MluCI	AATT	5 cut(s)	33, 71, 76, 1347, 1576
MlyI	GAGTC	2 cut(s)	1272, 1449
MmeI	TCCRAC	1 cut(s)	1975
MroXI	GAANNNNTTC	1 cut(s)	1254
MseI	TTAA	9 cut(s)	36, 591, 699, 840, 945, 1149, 1404, 1601, 1622
MslI	CAYNNNNRTG	2 cut(s)	451, 810
MspCI	CTTAAG	2 cut(s)	839, 1600
MspI	CCGG	3 cut(s)	297, 347, 1023
MspR9I	CCNGG	5 cut(s)	704, 1024, 1277, 1437, 2011
MvaI	CCWGG	4 cut(s)	704, 1277, 1437, 2011
MvnI	CGCG	3 cut(s)	1066, 1449, 1869
MwoI	GCNNNNNNNGC	8 cut(s)	181, 190, 500, 909, 1160, 1352, 1875, 1895
NciI	CCSGG	1 cut(s)	1024
NcoI	CCATGG	1 cut(s)	805
NdeII	GATC	4 cut(s)	141, 844, 1059, 1854
NlaIII	CATG	8 cut(s)	809, 878, 919, 982, 1651, 1819, 1951, 2053
NlaIV	GGNNCC	4 cut(s)	133, 295, 846, 1434
NmuCI	GTSAC	1 cut(s)	853
NspI	RCATGY	2 cut(s)	919, 2053
OliI	CACNNNNGTG	1 cut(s)	451
PaeI	GCATGC	2 cut(s)	919, 2053
PaeR7I	CTCGAG	1 cut(s)	563
PauI	GCGCGC	1 cut(s)	1447
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	4 cut(s)	527, 558, 1010, 1983
PflMI	CCANNNNNTGG	1 cut(s)	782
PfoI	TCCNGGA	1 cut(s)	2009
PinAI	ACCGGT	1 cut(s)	296
PleI	GAGTC	2 cut(s)	1271, 1448
PpsI	GAGTC	2 cut(s)	1271, 1448
PshBI	ATTAAT	1 cut(s)	36
PsiI	TTATAA	1 cut(s)	1212
Psp6I	CCWGG	4 cut(s)	702, 1275, 1435, 2009
PspFI	CCCAGC	2 cut(s)	175, 950
PspGI	CCWGG	4 cut(s)	702, 1275, 1435, 2009
PspN4I	GGNNCC	4 cut(s)	133, 295, 846, 1434
PspPI	GGNCC	1 cut(s)	158
PspXI	VCTCGAGB	1 cut(s)	563
PstNI	CAGNNNCTG	3 cut(s)	50, 782, 1397
PsuI	RGATCY	2 cut(s)	844, 1854
PteI	GCGCGC	1 cut(s)	1447
RsaI	GTAC	3 cut(s)	674, 725, 1171
RsaNI	GTAC	3 cut(s)	673, 724, 1170
RseI	CAYNNNNRTG	2 cut(s)	451, 810
SaqAI	TTAA	9 cut(s)	36, 591, 699, 840, 945, 1149, 1404, 1601, 1622
Sau3AI	GATC	4 cut(s)	141, 844, 1059, 1854
Sau96I	GGNCC	1 cut(s)	158
ScaI	AGTACT	1 cut(s)	1171
SchI	GAGTC	2 cut(s)	1272, 1449
ScrFI	CCNGG	5 cut(s)	704, 1024, 1277, 1437, 2011
SduI	GDGCHC	2 cut(s)	1288, 1900
SfaNI	GCATC	7 cut(s)	173, 453, 840, 967, 1598, 1988, 2013
Sfr274I	CTCGAG	1 cut(s)	563
SlaI	CTCGAG	1 cut(s)	563
SmiMI	CAYNNNNRTG	2 cut(s)	451, 810
SmlI	CTYRAG	4 cut(s)	563, 839, 1481, 1600
SmoI	CTYRAG	4 cut(s)	563, 839, 1481, 1600
SpeI	ACTAGT	2 cut(s)	1172, 1726
SphI	GCATGC	2 cut(s)	919, 2053
Sse9I	AATT	5 cut(s)	33, 71, 76, 1347, 1576
SsiI	CCGC	1 cut(s)	181
SspI	AATATT	2 cut(s)	40, 1840
SspMI	CTAG	8 cut(s)	18, 273, 629, 929, 1173, 1727, 1785, 2057
StyD4I	CCNGG	5 cut(s)	702, 1022, 1275, 1435, 2009
StyI	CCWWGG	2 cut(s)	805, 2043
TaaI	ACNGT	5 cut(s)	210, 381, 965, 1043, 1552
TaiI	ACGT	1 cut(s)	1992
TaqI	TCGA	2 cut(s)	556, 564
TasI	AATT	5 cut(s)	33, 71, 76, 1347, 1576
TatI	WGTACW	2 cut(s)	672, 1169
TauI	GCSGC	1 cut(s)	184
TfiI	GAWTC	4 cut(s)	527, 558, 1010, 1983
Tru1I	TTAA	9 cut(s)	36, 591, 699, 840, 945, 1149, 1404, 1601, 1622
Tru9I	TTAA	9 cut(s)	36, 591, 699, 840, 945, 1149, 1404, 1601, 1622
TscAI	CASTG	5 cut(s)	213, 391, 652, 940, 1786
TseFI	GTSAC	1 cut(s)	853
Tsp45I	GTSAC	1 cut(s)	853
TspDTI	ATGAA	2 cut(s)	762, 1023
TspGWI	ACGGA	1 cut(s)	1862
TspRI	CASTG	5 cut(s)	213, 391, 652, 940, 1786
Van91I	CCANNNNNTGG	1 cut(s)	782
Vha464I	CTTAAG	2 cut(s)	839, 1600
VneI	GTGCAC	1 cut(s)	1284
VspI	ATTAAT	1 cut(s)	36
XapI	RAATTY	2 cut(s)	71, 1576
XbaI	TCTAGA	1 cut(s)	2056
XceI	RCATGY	2 cut(s)	919, 2053
XcmI	CCANNNNNNNNNTGG	2 cut(s)	168, 1654
XhoI	CTCGAG	1 cut(s)	563
XmiI	GTMKAC	1 cut(s)	1797
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	8 cut(s)	18, 273, 629, 929, 1173, 1727, 1785, 2057
ZrmI	AGTACT	1 cut(s)	1171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.